FvH4_4g03550

Inorganic phosphate transporter

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
3203624 .. 3206614
2991 bp
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UTR
Exon/CDS
Intron
FvH4_4g03550.t1

Sequence Viewer

Length: 1560 bp
ATGGCTAAAGACCAATTGGAGGTGTTAAATGCACTTGATGTGGCCAAAACACAATGGTATCATTTCACAGCAATTGTGATTGCTGGCATGGGCTTCTTCACTGATGCATATGATCTGTTCTGCATATCTCTTGTCACTAAATTACTGGGTCGCATATACTACCAACAACATGGTTCTGCTAATCCTGGAAGTCTGCCTTCAAATGTCTCGGCTGCTGTTAATGGTGTGGCCTTCTGTGGCACACTTTCAGGCCAACTCTTCTTTGGTTGGCTCGGTGACAAATTAGGGCGAAAACGCGTCTATGGAATGGTCCTTATGGTCATGGTTTTATGCTCCATTGCCTCCGGCCTTTCATTTGGGAAACAACCTAAGGCTGTTATTTCGACATTGTGCTTCTTCAGGTTCTGGCTAGGCTTTGGCATCGGTGGTGACTACCCTCTTTCTGCTACTATCATGTCCGAGTATGCAAATAAAAAGACTCGTGGTGCCTTCATTGCTGCTGTGTTTGCAATGCAAGGTTTCGGGATCTTGGCTGGTGGAATGGTTGCGATAATTGTATCTGCAGTTTTCAAGGAGCTATATCCTGCTCCATCTTTTGCAGCTGATCCAGCTGCCTCTATTTTCCCACAAGCAGATTATGCATGGCGAATAATTCTGATGTTTGGTGCAATCCCAGCTTTGCTTACATACTACTGGCGAGCCAAAATGCCCGAAACTGCACGGTACACTGCCTTGGTTGCCAAGAATGCTAAGCAAGCGGCAGCTGACATGTCAAAAGTTTTGCAGGTTGACGTAGAAGCAGAACCAGTGAAAACGGAAGAACGCTCCCAACCTGGAAGAAATGATTTTGGTTTATTTTCAAAGGCTTTCCTTCGCCGTCATGGTCTTCACTTGCTTGGGACTACAAGCACATGGTTCTTGCTAGACATCGCCTTCTACAGTCAGAATCTGTTCCAAAAAGACATCTTCAGTGCCATTGGTTGGATCCCTAAGGCAAACACTATGAGTGCTATGGAAGAAGTCTTCAGAATTTCCAGAGCACAGACTCTTATTGCTCTCTGCAGCACAGTTCCAGGGTATTGGTTCACAGTGGCATTCATAGATAAGATTGGGAGGTTCACAATTCAATTGATGGGATTTTTCTTCATGACGGTTTTCATGTTTGCCTTAGCTATTCCTTATCATCACTGGACTCTGAAAGCTAACCGAATTGGTTTTGTTGTTATGTACTCATTGACCTTCTTTTTCGCCAATTTCGGACCAAATGCCACTACTTTTGTAGTGCCTGCAGAGATTTTCCCCGCGAGGCTAAGATCAACTTGCCATGGCATATCAGCTGCAGCGGGGAAGGCTGGGGCAATTGTTGGAGCATTTGGTTTCCAGTATGCAGAAAAGGTTATTGGGGTGAAGAACACCCTCATAATTTTGGGTGTGGTCAACTTTTTGGGGTTGTTGTTTACTTTCTTGGTGCCGGAGTCAAAGGGAAAATCATTGGAAGAAATGTCCGGGGAAGGAGAAGAAGAAAATGGAACTGAAACACAATCTAGTCAGCAGGCCTGA

Protein Analysis

520

Amino Acids

56.9

Weight (kDa)

9.1

Isoelectric Point (pI)

34.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 26 - 502 1.3e-51 Sugar (and other) transporter
MFS_1 PF07690 71 - 457 2.1e-20 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013797)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 775
AccB1I GGYRCC 2 cut(s) 485, 1468
AccB7I CCANNNNNTGG 1 cut(s) 981
AccII CGCG 2 cut(s) 297, 1304
AciI CCGC 3 cut(s) 758, 1302, 1343
AclWI GGATC 4 cut(s) 533, 599, 979, 992
AcoI YGGCCR 1 cut(s) 42
AcsI RAATTY 1 cut(s) 1029
AcuI CTGAAG 3 cut(s) 382, 952, 1009
AfaI GTAC 2 cut(s) 725, 1229
AfiI CCNNNNNNNGG 2 cut(s) 19, 981
AflIII ACRYGT 2 cut(s) 295, 768
AgsI TTSAA 4 cut(s) 201, 571, 861, 1127
AjnI CCWGG 3 cut(s) 184, 832, 1072
AjuI GAANNNNNNNTTGG 2 cut(s) 1383, 1415
AluBI AGCT 8 cut(s) 577, 602, 611, 677, 764, 1172, 1202, 1337
AluI AGCT 8 cut(s) 577, 602, 611, 677, 764, 1172, 1202, 1337
Alw21I GWGCWC 1 cut(s) 1042
Alw26I GTCTC 1 cut(s) 211
AlwI GGATC 4 cut(s) 533, 599, 979, 992
AlwNI CAGNNNCTG 2 cut(s) 405, 949
AoxI GGCC 5 cut(s) 42, 228, 250, 346, 1554
ApeKI GCWGC 8 cut(s) 212, 497, 599, 611, 761, 1062, 1337, 1340
ApoI RAATTY 1 cut(s) 1029
Asp700I GAANNNNTTC 1 cut(s) 950
AspS9I GGNCC 2 cut(s) 310, 1259
AsuC2I CCSGG 1 cut(s) 1507
AsuHPI GGTGA 3 cut(s) 287, 440, 1417
AvaII GGWCC 2 cut(s) 310, 1259
AxyI CCTNAGG 2 cut(s) 369, 990
BaeI ACNNNNGTAYC 2 cut(s) 41, 74
BalI TGGCCA 1 cut(s) 44
BamHI GGATCC 1 cut(s) 984
BanI GGYRCC 2 cut(s) 485, 1468
BauI CACGAG 1 cut(s) 480
BbsI GAAGAC 2 cut(s) 878, 1015
Bbv12I GWGCWC 1 cut(s) 1042
BbvI GCAGC 8 cut(s) 199, 484, 598, 611, 773, 1074, 1324, 1352
BccI CCATC 2 cut(s) 598, 1126
BceAI ACGGC 1 cut(s) 861
BciT130I CCWGG 3 cut(s) 186, 834, 1074
BcnI CCSGG 1 cut(s) 1507
BcoDI GTCTC 1 cut(s) 211
BfaI CTAG 3 cut(s) 410, 923, 1545
BfmI CTRYAG 5 cut(s) 561, 937, 1060, 1287, 1338
BfuAI ACCTGC 1 cut(s) 775
BisI GCNGC 9 cut(s) 213, 498, 600, 612, 759, 762, 1063, 1338, 1341
BlpI GCTNAGC 1 cut(s) 750
BlsI GCNGC 9 cut(s) 214, 499, 601, 613, 760, 763, 1064, 1339, 1342
Bme1390I CCNGG 4 cut(s) 186, 834, 1074, 1507
Bme18I GGWCC 2 cut(s) 310, 1259
BmgT120I GGNCC 2 cut(s) 310, 1259
BmiI GGNNCC 3 cut(s) 487, 986, 1470
BmrFI CCNGG 4 cut(s) 186, 834, 1074, 1507
BmrI ACTGGG 1 cut(s) 155
BmsI GCATC 2 cut(s) 94, 429
BmuI ACTGGG 1 cut(s) 155
BpiI GAAGAC 2 cut(s) 878, 1015
Bpu10I CCTNAGC 1 cut(s) 1168
Bpu1102I GCTNAGC 1 cut(s) 750
BpuMI CCSGG 1 cut(s) 1507
BsaJI CCNNGG 4 cut(s) 732, 1073, 1324, 1506
Bsc4I CCNNNNNNNGG 2 cut(s) 19, 981
Bse1I ACTGG 5 cut(s) 150, 698, 806, 1193, 1381
Bse21I CCTNAGG 2 cut(s) 369, 990
Bse3DI GCAATG 3 cut(s) 336, 492, 516
BseBI CCWGG 3 cut(s) 186, 834, 1074
BseDI CCNNGG 4 cut(s) 732, 1073, 1324, 1506
BseLI CCNNNNNNNGG 2 cut(s) 19, 981
BseMI GCAATG 3 cut(s) 336, 492, 516
BseNI ACTGG 5 cut(s) 150, 698, 806, 1193, 1381
BseXI GCAGC 8 cut(s) 199, 484, 598, 611, 773, 1074, 1324, 1352
BseYI CCCAGC 2 cut(s) 673, 1352
BsgI GTGCAG 1 cut(s) 702
Bsh1236I CGCG 2 cut(s) 297, 1304
BshFI GGCC 5 cut(s) 44, 230, 252, 348, 1556
BshNI GGYRCC 2 cut(s) 485, 1468
BsiHKAI GWGCWC 1 cut(s) 1042
BsiSI CCGG 3 cut(s) 345, 1472, 1506
BslFI GGGAC 1 cut(s) 913
BslI CCNNNNNNNGG 2 cut(s) 19, 981
BsmAI GTCTC 1 cut(s) 211
BsmFI GGGAC 1 cut(s) 913
BsmI GAATGC 2 cut(s) 751, 1094
BsnI GGCC 5 cut(s) 44, 230, 252, 348, 1556
Bsp1286I GDGCHC 1 cut(s) 1042
Bsp143I GATC 5 cut(s) 112, 525, 604, 984, 1313
Bsp1720I GCTNAGC 1 cut(s) 750
Bsp19I CCATGG 1 cut(s) 1324
BspACI CCGC 3 cut(s) 758, 1302, 1343
BspANI GGCC 5 cut(s) 44, 230, 252, 348, 1556
BspFNI CGCG 2 cut(s) 297, 1304
BspHI TCATGA 1 cut(s) 1146
BspLI GGNNCC 3 cut(s) 487, 986, 1470
BspMAI CTGCAG 4 cut(s) 565, 1064, 1291, 1342
BspMI ACCTGC 1 cut(s) 775
BspPI GGATC 4 cut(s) 533, 599, 979, 992
BspT107I GGYRCC 2 cut(s) 485, 1468
BsrDI GCAATG 3 cut(s) 336, 492, 516
BsrI ACTGG 5 cut(s) 150, 698, 806, 1193, 1381
BssECI CCNNGG 4 cut(s) 732, 1073, 1324, 1506
BssMI GATC 5 cut(s) 112, 525, 604, 984, 1313
BssSI CACGAG 1 cut(s) 480
BssT1I CCWWGG 2 cut(s) 732, 1324
Bst2BI CACGAG 1 cut(s) 480
Bst2UI CCWGG 3 cut(s) 186, 834, 1074
Bst4CI ACNGT 5 cut(s) 723, 941, 1069, 1090, 1153
Bst6I CTCTTC 1 cut(s) 263
BstAPI GCANNNNNTGC 1 cut(s) 638
BstC8I GCNNGC 5 cut(s) 85, 699, 756, 1287, 1554
BstDEI CTNAG 5 cut(s) 369, 750, 990, 1168, 1310
BstDSI CCRYGG 1 cut(s) 1324
BstFNI CGCG 2 cut(s) 297, 1304
BstKTI GATC 5 cut(s) 115, 528, 607, 987, 1316
BstMAI GTCTC 1 cut(s) 211
BstMBI GATC 5 cut(s) 112, 525, 604, 984, 1313
BstMWI GCNNNNNNNGC 9 cut(s) 494, 506, 608, 638, 674, 737, 746, 755, 1349
BstNI CCWGG 3 cut(s) 186, 834, 1074
BstNSI RCATGY 1 cut(s) 772
BstSCI CCNGG 4 cut(s) 184, 832, 1072, 1505
BstSFI CTRYAG 5 cut(s) 561, 937, 1060, 1287, 1338
BstUI CGCG 2 cut(s) 297, 1304
BstV1I GCAGC 8 cut(s) 199, 484, 598, 611, 773, 1074, 1324, 1352
BstV2I GAAGAC 2 cut(s) 878, 1015
BstX2I RGATCY 2 cut(s) 525, 984
BstXI CCANNNNNNTGG 2 cut(s) 170, 1080
BstYI RGATCY 2 cut(s) 525, 984
Bsu36I CCTNAGG 2 cut(s) 369, 990
BsuRI GGCC 5 cut(s) 44, 230, 252, 348, 1556
BtgI CCRYGG 1 cut(s) 1324
BtgZI GCGATG 1 cut(s) 913
BtsI GCAGTG 1 cut(s) 726
BtsIMutI CAGTG 6 cut(s) 99, 726, 813, 976, 1095, 1186
BveI ACCTGC 1 cut(s) 775
Cac8I GCNNGC 5 cut(s) 85, 699, 756, 1287, 1554
CaiI CAGNNNCTG 2 cut(s) 405, 949
CciI TCATGA 1 cut(s) 1146
Cfr13I GGNCC 2 cut(s) 310, 1259
CseI GACGC 1 cut(s) 286
Csp6I GTAC 2 cut(s) 724, 1228
CspCI CAANNNNNGTGG 2 cut(s) 1258, 1293
CviQI GTAC 2 cut(s) 724, 1228
DdeI CTNAG 5 cut(s) 369, 750, 990, 1168, 1310
DpnI GATC 5 cut(s) 114, 527, 606, 986, 1315
DpnII GATC 5 cut(s) 112, 525, 604, 984, 1313
EaeI YGGCCR 1 cut(s) 42
Eam1104I CTCTTC 1 cut(s) 263
EarI CTCTTC 1 cut(s) 263
Eco130I CCWWGG 2 cut(s) 732, 1324
Eco147I AGGCCT 1 cut(s) 1556
Eco47I GGWCC 2 cut(s) 310, 1259
Eco57I CTGAAG 3 cut(s) 382, 952, 1009
Eco81I CCTNAGG 2 cut(s) 369, 990
EcoRII CCWGG 3 cut(s) 184, 832, 1072
EcoT14I CCWWGG 2 cut(s) 732, 1324
EcoT22I ATGCAT 2 cut(s) 109, 643
ErhI CCWWGG 2 cut(s) 732, 1324
FalI AAGNNNNNCTT 4 cut(s) 181, 213, 1303, 1335
FaqI GGGAC 1 cut(s) 913
FauI CCCGC 2 cut(s) 1309, 1336
FauNDI CATATG 1 cut(s) 109
Fnu4HI GCNGC 9 cut(s) 213, 498, 600, 612, 759, 762, 1063, 1338, 1341
Fsp4HI GCNGC 9 cut(s) 213, 498, 600, 612, 759, 762, 1063, 1338, 1341
FspBI CTAG 3 cut(s) 410, 923, 1545
GluI GCNGC 9 cut(s) 213, 498, 600, 612, 759, 762, 1063, 1338, 1341
GsaI CCCAGC 2 cut(s) 677, 1356
HaeIII GGCC 5 cut(s) 44, 230, 252, 348, 1556
HapII CCGG 3 cut(s) 345, 1472, 1506
HgaI GACGC 1 cut(s) 286
HincII GTYRAC 2 cut(s) 790, 1438
HindII GTYRAC 2 cut(s) 790, 1438
HinfI GANTC 5 cut(s) 478, 946, 1045, 1192, 1475
HpaII CCGG 3 cut(s) 345, 1472, 1506
HphI GGTGA 3 cut(s) 287, 440, 1417
Hpy166II GTNNAC 6 cut(s) 726, 790, 1086, 1119, 1438, 1458
Hpy188I TCNGA 6 cut(s) 460, 657, 945, 1028, 1197, 1259
Hpy188III TCNNGA 3 cut(s) 523, 1035, 1147
Hpy8I GTNNAC 6 cut(s) 726, 790, 1086, 1119, 1438, 1458
HpyAV CCTTC 8 cut(s) 207, 241, 499, 881, 943, 1249, 1342, 1505
HpyCH4III ACNGT 5 cut(s) 723, 941, 1069, 1090, 1153
HpyCH4IV ACGT 1 cut(s) 792
HpyF10VI GCNNNNNNNGC 9 cut(s) 494, 506, 608, 638, 674, 737, 746, 755, 1349
HpyF3I CTNAG 5 cut(s) 369, 750, 990, 1168, 1310
HpySE526I ACGT 1 cut(s) 792
Kzo9I GATC 5 cut(s) 112, 525, 604, 984, 1313
LmnI GCTCC 5 cut(s) 338, 574, 592, 830, 1367
Lsp1109I GCAGC 8 cut(s) 199, 484, 598, 611, 773, 1074, 1324, 1352
LweI GCATC 2 cut(s) 94, 429
MaeI CTAG 3 cut(s) 410, 923, 1545
MaeII ACGT 1 cut(s) 792
MaeIII GTNAC 3 cut(s) 133, 275, 428
MalI GATC 5 cut(s) 114, 527, 606, 986, 1315
MboI GATC 5 cut(s) 112, 525, 604, 984, 1313
MfeI CAATTG 4 cut(s) 14, 72, 1127, 1359
MflI RGATCY 2 cut(s) 525, 984
MhlI GDGCHC 1 cut(s) 1042
MlsI TGGCCA 1 cut(s) 44
MluI ACGCGT 1 cut(s) 295
MluNI TGGCCA 1 cut(s) 44
MlyI GAGTC 4 cut(s) 472, 1039, 1186, 1484
MmeI TCCRAC 2 cut(s) 962, 1345
MnlI CCTC 7 cut(s) 13, 352, 447, 625, 1107, 1299, 1427
Mox20I TGGCCA 1 cut(s) 44
Mph1103I ATGCAT 2 cut(s) 109, 643
MroXI GAANNNNTTC 1 cut(s) 950
MscI TGGCCA 1 cut(s) 44
MseI TTAA 2 cut(s) 26, 219
Msp20I TGGCCA 1 cut(s) 44
MspA1I CMGCKG 5 cut(s) 602, 611, 764, 1337, 1343
MspI CCGG 3 cut(s) 345, 1472, 1506
MspR9I CCNGG 4 cut(s) 186, 834, 1074, 1507
MunI CAATTG 4 cut(s) 14, 72, 1127, 1359
Mva1269I GAATGC 2 cut(s) 751, 1094
MvaI CCWGG 3 cut(s) 186, 834, 1074
MvnI CGCG 2 cut(s) 297, 1304
MwoI GCNNNNNNNGC 9 cut(s) 494, 506, 608, 638, 674, 737, 746, 755, 1349
NciI CCSGG 1 cut(s) 1507
NcoI CCATGG 1 cut(s) 1324
NdeI CATATG 1 cut(s) 109
NdeII GATC 5 cut(s) 112, 525, 604, 984, 1313
NlaIV GGNNCC 3 cut(s) 487, 986, 1470
NmeAIII GCCGAG 1 cut(s) 188
NmuCI GTSAC 3 cut(s) 133, 275, 428
NsiI ATGCAT 2 cut(s) 109, 643
NspI RCATGY 1 cut(s) 772
PagI TCATGA 1 cut(s) 1146
PceI AGGCCT 1 cut(s) 1556
PciI ACATGT 1 cut(s) 768
PctI GAATGC 2 cut(s) 751, 1094
PdmI GAANNNNTTC 1 cut(s) 950
PfeI GAWTC 1 cut(s) 946
PflMI CCANNNNNTGG 1 cut(s) 981
PfoI TCCNGGA 1 cut(s) 184
PkrI GCNGC 9 cut(s) 214, 499, 601, 613, 760, 763, 1064, 1339, 1342
PleI GAGTC 4 cut(s) 472, 1039, 1186, 1483
PpsI GAGTC 4 cut(s) 472, 1039, 1186, 1483
PscI ACATGT 1 cut(s) 768
Psp6I CCWGG 3 cut(s) 184, 832, 1072
PspFI CCCAGC 2 cut(s) 673, 1352
PspGI CCWGG 3 cut(s) 184, 832, 1072
PspN4I GGNNCC 3 cut(s) 487, 986, 1470
PspPI GGNCC 2 cut(s) 310, 1259
PstI CTGCAG 4 cut(s) 565, 1064, 1291, 1342
PstNI CAGNNNCTG 2 cut(s) 405, 949
PsuI RGATCY 2 cut(s) 525, 984
PvuII CAGCTG 4 cut(s) 602, 611, 764, 1337
RsaI GTAC 2 cut(s) 725, 1229
RsaNI GTAC 2 cut(s) 724, 1228
SaqAI TTAA 2 cut(s) 26, 219
SatI GCNGC 9 cut(s) 213, 498, 600, 612, 759, 762, 1063, 1338, 1341
Sau3AI GATC 5 cut(s) 112, 525, 604, 984, 1313
Sau96I GGNCC 2 cut(s) 310, 1259
SchI GAGTC 4 cut(s) 472, 1039, 1186, 1484
ScrFI CCNGG 4 cut(s) 186, 834, 1074, 1507
SduI GDGCHC 1 cut(s) 1042
SfaNI GCATC 2 cut(s) 94, 429
SfcI CTRYAG 5 cut(s) 561, 937, 1060, 1287, 1338
SinI GGWCC 2 cut(s) 310, 1259
SseBI AGGCCT 1 cut(s) 1556
SsiI CCGC 3 cut(s) 758, 1302, 1343
SspMI CTAG 3 cut(s) 410, 923, 1545
StuI AGGCCT 1 cut(s) 1556
StyD4I CCNGG 4 cut(s) 184, 832, 1072, 1505
StyI CCWWGG 2 cut(s) 732, 1324
TaaI ACNGT 5 cut(s) 723, 941, 1069, 1090, 1153
TaiI ACGT 1 cut(s) 795
TaqI TCGA 1 cut(s) 383
TatI WGTACW 1 cut(s) 1227
TauI GCSGC 1 cut(s) 761
TfiI GAWTC 1 cut(s) 946
Tru1I TTAA 2 cut(s) 26, 219
Tru9I TTAA 2 cut(s) 26, 219
TscAI CASTG 6 cut(s) 106, 733, 813, 976, 1095, 1193
TseFI GTSAC 3 cut(s) 133, 275, 428
TseI GCWGC 8 cut(s) 212, 497, 599, 611, 761, 1062, 1337, 1340
Tsp45I GTSAC 3 cut(s) 133, 275, 428
TspDTI ATGAA 5 cut(s) 342, 481, 1087, 1135, 1147
TspGWI ACGGA 1 cut(s) 830
TspRI CASTG 6 cut(s) 106, 733, 813, 976, 1095, 1193
Van91I CCANNNNNTGG 1 cut(s) 981
VpaK11BI GGWCC 2 cut(s) 310, 1259
XapI RAATTY 1 cut(s) 1029
XceI RCATGY 1 cut(s) 772
XcmI CCANNNNNNNNNTGG 1 cut(s) 260
XmnI GAANNNNTTC 1 cut(s) 950
XspI CTAG 3 cut(s) 410, 923, 1545
Zsp2I ATGCAT 2 cut(s) 109, 643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.