MD13G1213500.v1.1

Inorganic phosphate transporter

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Forward (+)
20117270 .. 20120291
3022 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1213500.v1.1.491

Sequence Viewer

Length: 1566 bp
ATGGCCAATGATCAATTGGAGGTGCTGAATGCACTTGATGTGGCCAAAACACAATGGTACCATTTCACAGCAATTGTGATTGCAGGCATGGGATTTTTCACTGATGCATATGATCTCTTCTGCATTTCCCTTGTCACGAAATTGCTCGGCCGCATTTATTACCAGAAACACGGAGCTGCAGAGCCAGGCAGTTTGCCTCATAATGTTTCGGCCGCTGTCAATGGTGTTGCCTTCTGTGGCACCCTAACTGGCCAGCTTTTCTTCGGCTGGCTTGGTGACAAATTGGGCAGAAAACGCGTCTACGGCATGGTCCTTATGGTCATGGTCATTTGCTCTATTGCCTCCGGCCTCTCGTTTGGTAGAGAACCCAAGGCAGTGATTTCAACACTCTGTTTTTTCAGGTTCTGGTTAGGCTTTGGCATTGGCGGCGACTACCCTCTTTCAGCCACTATCATGTCTGAGTACGCAAATAAAAAGACTCGCGGAGCCTTCATTGCTGCCGTGTTTGCTATGCAGGGTTTTGGGATTTTGGCTGGTGGAACGGTTGCAATTATTGTGTCTGCAACTTTTAAGGCAAGATTTCCTGCACCATCTTACGAAGCTGATCCAGCCACCTCTATTTTCCCTGAAGCAGATTATGTTTGGCGCATTATTTTGATGTTTGGTGCTATCCCAGCTCTGATGACTTACTACTGGCGTGCGAAAATGCCAGAAACTGCTCGGTACACTGCCTTGGTGGCCAAGAATGCCAAGCAGGCTGCTGCTGATATGTCAAAAGTTTTGCAGGTTGAAGTTGAAGCAGAACAAGGGAGAACTGAGCAAGGAGGGAATGATTTTGGTCTTTTTTCAAAGGAATTTCTTCGGCGTCATGGTCTTCACTTGCTCGGAACTACCAGCACATGGTTCTTGCTTGATATTGCCTTCTACAGCCAGAATCTATTTCAAAAGGACATCTTCAGTGCCATTGGTTGGATTCCAAAGGCAAAGACCATGAGTGCTCTTGAAGAAGTCTTCAAAATTGCCAGAGCGCAAACCCTCATCGCCCTATGCAGCACTGTCCCAGGGTACTGGTTCACTGTGGCATTCATCGATAGGATTGGAAGGTTCTCAATTCAAATAATGGGCTTTTTCTTCATGACTGTTTTCATGTTTGCATTAGCCATTCCTTACCAGCACTGGACTCTAAAAGAAAACCGAGTAGGGTTTGTTGTGATGTACTCATTGACCTTCTTCTTCGCCAATTTCGGTCCAAATGCCACGACATTTGTGGTGCCTGCAGAGATTTTCCCAGCAAGGTTAAGGTCAACATGTCACGGAATTTCAGCTGCGTGGGGGAAGGCCGGGGCAATGATTGGCGCATTCGGATTTCAGTACGCAGAAAAGGGAATTGGGGTGAGGAACTCCCTTATAATTTTGGGTGTGGTCAACTTGCTAGGCCTGCTATTTACATTCTTGGTCCCTGAATCAAAGGGAAGGTCATTGGAGGATTTGTCTGGTGAAGGAGAGCAAGAAAATGCGGCTCCATCAGGATCAAGGCAGCAAGAAAATGAAACTGCTCCGGTTTGA

Protein Analysis

522

Amino Acids

57.28

Weight (kDa)

8.84

Isoelectric Point (pI)

32.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 26 - 497 1e-49 Sugar (and other) transporter
MFS_1 PF07690 70 - 453 1.5e-19 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013797)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1409
Acc36I ACCTGC 1 cut(s) 775
Acc65I GGTACC 1 cut(s) 57
AccB1I GGYRCC 3 cut(s) 57, 239, 1270
AccB7I CCANNNNNTGG 2 cut(s) 900, 969
AccI GTMKAC 1 cut(s) 300
AccII CGCG 2 cut(s) 297, 483
AciI CCGC 5 cut(s) 151, 213, 426, 483, 1517
AclWI GGATC 2 cut(s) 599, 1537
AcoI YGGCCR 6 cut(s) 3, 42, 148, 210, 250, 738
AcsI RAATTY 2 cut(s) 854, 1317
AcuI CTGAAG 2 cut(s) 648, 940
AcyI GRCGYC 1 cut(s) 865
AfaI GTAC 6 cut(s) 59, 464, 725, 1067, 1217, 1373
AfiI CCNNNNNNNGG 2 cut(s) 900, 969
AflIII ACRYGT 2 cut(s) 295, 1307
AgsI TTSAA 8 cut(s) 384, 791, 797, 849, 944, 1004, 1015, 1115
AjnI CCWGG 2 cut(s) 184, 1060
AjuI GAANNNNNNNTTGG 2 cut(s) 1371, 1403
AluBI AGCT 5 cut(s) 176, 256, 602, 677, 1325
AluI AGCT 5 cut(s) 176, 256, 602, 677, 1325
Alw21I GWGCWC 1 cut(s) 1000
AlwI GGATC 2 cut(s) 599, 1537
AlwNI CAGNNNCTG 2 cut(s) 405, 716
AoxI GGCC 9 cut(s) 3, 42, 148, 210, 250, 346, 738, 1338, 1435
ApeKI GCWGC 7 cut(s) 176, 497, 758, 761, 1050, 1325, 1537
ApoI RAATTY 2 cut(s) 854, 1317
ArsI GACNNNNNNTTYG 2 cut(s) 1460, 1492
Asp700I GAANNNNTTC 1 cut(s) 858
Asp718I GGTACC 1 cut(s) 57
AspLEI GCGC 3 cut(s) 648, 1030, 1358
AspS9I GGNCC 3 cut(s) 310, 1247, 1456
AsuC2I CCSGG 1 cut(s) 1342
AsuHPI GGTGA 3 cut(s) 287, 1405, 1508
AvaII GGWCC 3 cut(s) 310, 1247, 1456
BaeI ACNNNNGTAYC 2 cut(s) 41, 74
BalI TGGCCA 4 cut(s) 5, 44, 252, 740
BanI GGYRCC 3 cut(s) 57, 239, 1270
BbsI GAAGAC 2 cut(s) 866, 1003
Bbv12I GWGCWC 1 cut(s) 1000
BbvI GCAGC 7 cut(s) 163, 484, 745, 748, 1062, 1312, 1549
BccI CCATC 2 cut(s) 598, 1531
BceAI ACGGC 2 cut(s) 319, 485
BciT130I CCWGG 2 cut(s) 186, 1062
BclI TGATCA 1 cut(s) 10
BcnI CCSGG 1 cut(s) 1342
BfaI CTAG 1 cut(s) 1433
BfmI CTRYAG 3 cut(s) 177, 925, 1275
BfuAI ACCTGC 1 cut(s) 775
BglI GCCNNNNNGGC 2 cut(s) 737, 755
Bme1390I CCNGG 3 cut(s) 186, 1062, 1342
Bme18I GGWCC 3 cut(s) 310, 1247, 1456
BmgT120I GGNCC 3 cut(s) 310, 1247, 1456
BmiI GGNNCC 6 cut(s) 59, 241, 487, 1272, 1458, 1521
BmrFI CCNGG 3 cut(s) 186, 1062, 1342
BmsI GCATC 1 cut(s) 94
BpiI GAAGAC 2 cut(s) 866, 1003
BpuMI CCSGG 1 cut(s) 1342
Bsa29I ATCGAT 1 cut(s) 1089
BsaHI GRCGYC 1 cut(s) 865
BsaJI CCNNGG 5 cut(s) 369, 732, 1060, 1061, 1341
BsaWI WCCGGW 1 cut(s) 1558
BsaXI ACNNNNNCTCC 2 cut(s) 1475, 1505
Bsc4I CCNNNNNNNGG 2 cut(s) 900, 969
Bse1I ACTGG 4 cut(s) 253, 698, 1073, 1181
Bse3DI GCAATG 2 cut(s) 492, 1353
BseBI CCWGG 2 cut(s) 186, 1062
BseCI ATCGAT 1 cut(s) 1089
BseDI CCNNGG 5 cut(s) 369, 732, 1060, 1061, 1341
BseLI CCNNNNNNNGG 2 cut(s) 900, 969
BseMI GCAATG 2 cut(s) 492, 1353
BseMII CTCAG 2 cut(s) 450, 807
BseNI ACTGG 4 cut(s) 253, 698, 1073, 1181
BseX3I CGGCCG 2 cut(s) 148, 210
BseXI GCAGC 7 cut(s) 163, 484, 745, 748, 1062, 1312, 1549
BseYI CCCAGC 2 cut(s) 673, 1288
BsgI GTGCAG 1 cut(s) 570
Bsh1236I CGCG 2 cut(s) 297, 483
Bsh1285I CGRYCG 2 cut(s) 151, 213
BshFI GGCC 9 cut(s) 5, 44, 150, 212, 252, 348, 740, 1340, 1437
BshNI GGYRCC 3 cut(s) 57, 239, 1270
BshVI ATCGAT 1 cut(s) 1089
BsiEI CGRYCG 2 cut(s) 151, 213
BsiHKAI GWGCWC 1 cut(s) 1000
BsiSI CCGG 3 cut(s) 345, 1341, 1559
BslFI GGGAC 2 cut(s) 1043, 1442
BslI CCNNNNNNNGG 2 cut(s) 900, 969
BsmFI GGGAC 2 cut(s) 1043, 1442
BsmI GAATGC 4 cut(s) 34, 751, 1082, 1358
BsnI GGCC 9 cut(s) 5, 44, 150, 212, 252, 348, 740, 1340, 1437
Bsp1286I GDGCHC 1 cut(s) 1000
Bsp143I GATC 4 cut(s) 10, 112, 604, 1529
BspACI CCGC 5 cut(s) 151, 213, 426, 483, 1517
BspANI GGCC 9 cut(s) 5, 44, 150, 212, 252, 348, 740, 1340, 1437
BspCNI CTCAG 2 cut(s) 451, 808
BspDI ATCGAT 1 cut(s) 1089
BspFNI CGCG 2 cut(s) 297, 483
BspHI TCATGA 1 cut(s) 1134
BspLI GGNNCC 6 cut(s) 59, 241, 487, 1272, 1458, 1521
BspMAI CTGCAG 2 cut(s) 181, 1279
BspMI ACCTGC 1 cut(s) 775
BspPI GGATC 2 cut(s) 599, 1537
BspT107I GGYRCC 3 cut(s) 57, 239, 1270
BsrDI GCAATG 2 cut(s) 492, 1353
BsrI ACTGG 4 cut(s) 253, 698, 1073, 1181
BssECI CCNNGG 5 cut(s) 369, 732, 1060, 1061, 1341
BssMI GATC 4 cut(s) 10, 112, 604, 1529
BssNI GRCGYC 1 cut(s) 865
BssT1I CCWWGG 2 cut(s) 369, 732
Bst2UI CCWGG 2 cut(s) 186, 1062
Bst4CI ACNGT 4 cut(s) 544, 1057, 1078, 1141
Bst6I CTCTTC 1 cut(s) 122
BstACI GRCGYC 1 cut(s) 865
BstC8I GCNNGC 7 cut(s) 85, 254, 269, 699, 756, 1275, 1439
BstDEI CTNAG 2 cut(s) 459, 816
BstFNI CGCG 2 cut(s) 297, 483
BstHHI GCGC 3 cut(s) 648, 1030, 1358
BstKTI GATC 4 cut(s) 13, 115, 607, 1532
BstMBI GATC 4 cut(s) 10, 112, 604, 1529
BstMCI CGRYCG 2 cut(s) 151, 213
BstNI CCWGG 2 cut(s) 186, 1062
BstNSI RCATGY 1 cut(s) 1311
BstSCI CCNGG 3 cut(s) 184, 1060, 1340
BstSFI CTRYAG 3 cut(s) 177, 925, 1275
BstUI CGCG 2 cut(s) 297, 483
BstV1I GCAGC 7 cut(s) 163, 484, 745, 748, 1062, 1312, 1549
BstV2I GAAGAC 2 cut(s) 866, 1003
BstXI CCANNNNNNTGG 1 cut(s) 1068
BstZI CGGCCG 2 cut(s) 148, 210
Bsu15I ATCGAT 1 cut(s) 1089
BsuRI GGCC 9 cut(s) 5, 44, 150, 212, 252, 348, 740, 1340, 1437
BsuTUI ATCGAT 1 cut(s) 1089
BtgZI GCGATG 1 cut(s) 1024
BtsI GCAGTG 2 cut(s) 381, 726
BtsIMutI CAGTG 7 cut(s) 99, 381, 726, 964, 1053, 1074, 1174
BveI ACCTGC 1 cut(s) 775
Cac8I GCNNGC 7 cut(s) 85, 254, 269, 699, 756, 1275, 1439
CaiI CAGNNNCTG 2 cut(s) 405, 716
CciI TCATGA 1 cut(s) 1134
CfoI GCGC 3 cut(s) 648, 1030, 1358
Cfr13I GGNCC 3 cut(s) 310, 1247, 1456
ClaI ATCGAT 1 cut(s) 1089
CseI GACGC 2 cut(s) 286, 854
Csp6I GTAC 6 cut(s) 58, 463, 724, 1066, 1216, 1372
CspCI CAANNNNNGTGG 2 cut(s) 1246, 1281
CviQI GTAC 6 cut(s) 58, 463, 724, 1066, 1216, 1372
DdeI CTNAG 2 cut(s) 459, 816
DpnI GATC 4 cut(s) 12, 114, 606, 1531
DpnII GATC 4 cut(s) 10, 112, 604, 1529
EaeI YGGCCR 6 cut(s) 3, 42, 148, 210, 250, 738
EagI CGGCCG 2 cut(s) 148, 210
Eam1104I CTCTTC 1 cut(s) 122
EarI CTCTTC 1 cut(s) 122
EclXI CGGCCG 2 cut(s) 148, 210
Eco130I CCWWGG 2 cut(s) 369, 732
Eco147I AGGCCT 1 cut(s) 1437
Eco47I GGWCC 3 cut(s) 310, 1247, 1456
Eco52I CGGCCG 2 cut(s) 148, 210
Eco57I CTGAAG 2 cut(s) 648, 940
EcoRII CCWGG 2 cut(s) 184, 1060
EcoT14I CCWWGG 2 cut(s) 369, 732
EcoT22I ATGCAT 1 cut(s) 109
ErhI CCWWGG 2 cut(s) 369, 732
FalI AAGNNNNNCTT 2 cut(s) 938, 970
FaqI GGGAC 2 cut(s) 1043, 1442
FauNDI CATATG 1 cut(s) 109
FbaI TGATCA 1 cut(s) 10
FblI GTMKAC 1 cut(s) 300
FspBI CTAG 1 cut(s) 1433
GlaI GCGC 3 cut(s) 647, 1029, 1357
GsaI CCCAGC 2 cut(s) 677, 1292
HaeIII GGCC 9 cut(s) 5, 44, 150, 212, 252, 348, 740, 1340, 1437
HapII CCGG 3 cut(s) 345, 1341, 1559
HgaI GACGC 2 cut(s) 286, 854
HhaI GCGC 3 cut(s) 648, 1030, 1358
Hin1I GRCGYC 1 cut(s) 865
Hin6I GCGC 3 cut(s) 646, 1028, 1356
HinP1I GCGC 3 cut(s) 646, 1028, 1356
HincII GTYRAC 2 cut(s) 1305, 1426
HindII GTYRAC 2 cut(s) 1305, 1426
HinfI GANTC 5 cut(s) 478, 934, 973, 1180, 1463
HpaII CCGG 3 cut(s) 345, 1341, 1559
HphI GGTGA 3 cut(s) 287, 1405, 1508
Hpy166II GTNNAC 5 cut(s) 301, 726, 1074, 1305, 1426
Hpy188I TCNGA 4 cut(s) 460, 681, 887, 1364
Hpy188III TCNNGA 4 cut(s) 136, 1001, 1135, 1527
Hpy8I GTNNAC 5 cut(s) 301, 726, 1074, 1305, 1426
HpyAV CCTTC 8 cut(s) 241, 499, 931, 1095, 1237, 1330, 1467, 1493
HpyCH4III ACNGT 4 cut(s) 544, 1057, 1078, 1141
HpyF3I CTNAG 2 cut(s) 459, 816
Hsp92I GRCGYC 1 cut(s) 865
HspAI GCGC 3 cut(s) 646, 1028, 1356
KpnI GGTACC 1 cut(s) 61
Ksp22I TGATCA 1 cut(s) 10
Kzo9I GATC 4 cut(s) 10, 112, 604, 1529
LmnI GCTCC 4 cut(s) 173, 485, 1525, 1561
Lsp1109I GCAGC 7 cut(s) 163, 484, 745, 748, 1062, 1312, 1549
LweI GCATC 1 cut(s) 94
MaeI CTAG 1 cut(s) 1433
MaeIII GTNAC 3 cut(s) 133, 275, 1310
MalI GATC 4 cut(s) 12, 114, 606, 1531
MboI GATC 4 cut(s) 10, 112, 604, 1529
MfeI CAATTG 2 cut(s) 14, 72
MhlI GDGCHC 1 cut(s) 1000
MlsI TGGCCA 4 cut(s) 5, 44, 252, 740
MluI ACGCGT 1 cut(s) 295
MluNI TGGCCA 4 cut(s) 5, 44, 252, 740
MlyI GAGTC 2 cut(s) 472, 1174
MmeI TCCRAC 1 cut(s) 950
Mox20I TGGCCA 4 cut(s) 5, 44, 252, 740
Mph1103I ATGCAT 1 cut(s) 109
MroXI GAANNNNTTC 1 cut(s) 858
MscI TGGCCA 4 cut(s) 5, 44, 252, 740
MseI TTAA 2 cut(s) 570, 1298
MslI CAYNNNNRTG 1 cut(s) 452
Msp20I TGGCCA 4 cut(s) 5, 44, 252, 740
MspA1I CMGCKG 2 cut(s) 215, 1325
MspI CCGG 3 cut(s) 345, 1341, 1559
MspR9I CCNGG 3 cut(s) 186, 1062, 1342
MunI CAATTG 2 cut(s) 14, 72
Mva1269I GAATGC 4 cut(s) 34, 751, 1082, 1358
MvaI CCWGG 2 cut(s) 186, 1062
MvnI CGCG 2 cut(s) 297, 483
NciI CCSGG 1 cut(s) 1342
NdeI CATATG 1 cut(s) 109
NdeII GATC 4 cut(s) 10, 112, 604, 1529
NlaIV GGNNCC 6 cut(s) 59, 241, 487, 1272, 1458, 1521
NmeAIII GCCGAG 1 cut(s) 126
NmuCI GTSAC 3 cut(s) 133, 275, 1310
NsiI ATGCAT 1 cut(s) 109
NspI RCATGY 1 cut(s) 1311
PagI TCATGA 1 cut(s) 1134
PasI CCCWGGG 1 cut(s) 1061
PceI AGGCCT 1 cut(s) 1437
PciI ACATGT 1 cut(s) 1307
PctI GAATGC 4 cut(s) 34, 751, 1082, 1358
PdmI GAANNNNTTC 1 cut(s) 858
PfeI GAWTC 3 cut(s) 934, 973, 1463
PflMI CCANNNNNTGG 2 cut(s) 900, 969
PleI GAGTC 2 cut(s) 472, 1174
PpsI GAGTC 2 cut(s) 472, 1174
PscI ACATGT 1 cut(s) 1307
PsiI TTATAA 1 cut(s) 1409
Psp6I CCWGG 2 cut(s) 184, 1060
PspFI CCCAGC 2 cut(s) 673, 1288
PspGI CCWGG 2 cut(s) 184, 1060
PspN4I GGNNCC 6 cut(s) 59, 241, 487, 1272, 1458, 1521
PspPI GGNCC 3 cut(s) 310, 1247, 1456
PstI CTGCAG 2 cut(s) 181, 1279
PstNI CAGNNNCTG 2 cut(s) 405, 716
PvuII CAGCTG 1 cut(s) 1325
RsaI GTAC 6 cut(s) 59, 464, 725, 1067, 1217, 1373
RsaNI GTAC 6 cut(s) 58, 463, 724, 1066, 1216, 1372
RseI CAYNNNNRTG 1 cut(s) 452
SaqAI TTAA 2 cut(s) 570, 1298
Sau3AI GATC 4 cut(s) 10, 112, 604, 1529
Sau96I GGNCC 3 cut(s) 310, 1247, 1456
SchI GAGTC 2 cut(s) 472, 1174
ScrFI CCNGG 3 cut(s) 186, 1062, 1342
SduI GDGCHC 1 cut(s) 1000
SfaNI GCATC 1 cut(s) 94
SfcI CTRYAG 3 cut(s) 177, 925, 1275
SinI GGWCC 3 cut(s) 310, 1247, 1456
SmiMI CAYNNNNRTG 1 cut(s) 452
SseBI AGGCCT 1 cut(s) 1437
SsiI CCGC 5 cut(s) 151, 213, 426, 483, 1517
SspMI CTAG 1 cut(s) 1433
StuI AGGCCT 1 cut(s) 1437
StyD4I CCNGG 3 cut(s) 184, 1060, 1340
StyI CCWWGG 2 cut(s) 369, 732
TaaI ACNGT 4 cut(s) 544, 1057, 1078, 1141
TaqI TCGA 1 cut(s) 1089
TaqII GACCGA 1 cut(s) 1235
TatI WGTACW 1 cut(s) 1215
TauI GCSGC 4 cut(s) 153, 215, 429, 1520
TfiI GAWTC 3 cut(s) 934, 973, 1463
Tru1I TTAA 2 cut(s) 570, 1298
Tru9I TTAA 2 cut(s) 570, 1298
TscAI CASTG 7 cut(s) 106, 381, 733, 964, 1060, 1081, 1181
TseFI GTSAC 3 cut(s) 133, 275, 1310
TseI GCWGC 7 cut(s) 176, 497, 758, 761, 1050, 1325, 1537
Tsp45I GTSAC 3 cut(s) 133, 275, 1310
TspDTI ATGAA 5 cut(s) 481, 1075, 1123, 1135, 1563
TspGWI ACGGA 2 cut(s) 186, 1329
TspRI CASTG 7 cut(s) 106, 381, 733, 964, 1060, 1081, 1181
Van91I CCANNNNNTGG 2 cut(s) 900, 969
VpaK11BI GGWCC 3 cut(s) 310, 1247, 1456
XapI RAATTY 2 cut(s) 854, 1317
XceI RCATGY 1 cut(s) 1311
XcmI CCANNNNNNNNNTGG 2 cut(s) 13, 1264
XmiI GTMKAC 1 cut(s) 300
XmnI GAANNNNTTC 1 cut(s) 858
XspI CTAG 1 cut(s) 1433
Zsp2I ATGCAT 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.