motor activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04600 AT2G33240 AT2G33240 AT2G33240 AT2G33240 AT2G33240 AT2G33240 AT2G33240 AT2G33240 |
| fragaria_vesca | FvH4_4g05270 FvH4_4g05270 |
| malus_domestica | MD13G1226900.v1.1 MD16G1232500.v1.1 |
| prunus_persica | Prupe.1G054200_v2.0.a1 Prupe.1G054200_v2.0.a1 |
| pyrus_communis | pycom13g19990 pycom16g19440 |
| rosa_chinensis | RchiOBHm_Chr4g0396201 |
| rosa_laevigata | RLG00000009559 |
| rosa_multiflora | Rmu_sc0006325.1_g000047 |
| rosa_roxburghii | Rroxscaffold_5G00341050 |
| rosa_rugosa | Rorug03G0350800 Rorug03G0350800 |
| rosa_samantha | Rh4BG065700 Rh4CG072400 Rh4DG062500 |
| rosa_wichuraiana | Rw4G005420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 864, 2409, 2594 |
| AccB1I | GGYRCC | 2 cut(s) | 2654, 3832 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2972 |
| AccBSI | CCGCTC | 2 cut(s) | 2162, 3079 |
| AccI | GTMKAC | 1 cut(s) | 192 |
| AccII | CGCG | 3 cut(s) | 727, 1779, 4449 |
| AciI | CCGC | 5 cut(s) | 553, 2162, 2499, 3079, 3202 |
| AclI | AACGTT | 2 cut(s) | 1559, 1600 |
| AcoI | YGGCCR | 3 cut(s) | 138, 1200, 2985 |
| AcuI | CTGAAG | 3 cut(s) | 647, 2409, 2645 |
| AcvI | CACGTG | 1 cut(s) | 2219 |
| AcyI | GRCGYC | 1 cut(s) | 3833 |
| AdeI | CACNNNGTG | 1 cut(s) | 2588 |
| AfaI | GTAC | 9 cut(s) | 118, 496, 812, 896, 978, 1679, 2378, 3575, 4017 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 185, 2972, 3709, 4123 |
| AflIII | ACRYGT | 2 cut(s) | 1123, 2218 |
| AjnI | CCWGG | 7 cut(s) | 447, 1498, 2121, 3519, 3702, 3828, 4185 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2057, 2089 |
| Alw21I | GWGCWC | 1 cut(s) | 2548 |
| Alw26I | GTCTC | 5 cut(s) | 313, 1139, 3133, 3777, 3927 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 695, 1019, 1073, 1175, 2972 |
| Ama87I | CYCGRG | 1 cut(s) | 3143 |
| AoxI | GGCC | 6 cut(s) | 138, 1200, 2524, 2985, 3642, 3711 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2711, 2743 |
| AseI | ATTAAT | 1 cut(s) | 432 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 311 |
| AspLEI | GCGC | 4 cut(s) | 1198, 3702, 3835, 4449 |
| AspS9I | GGNCC | 3 cut(s) | 1053, 3175, 3517 |
| AsuC2I | CCSGG | 1 cut(s) | 228 |
| AsuII | TTCGAA | 1 cut(s) | 1277 |
| AvaI | CYCGRG | 1 cut(s) | 3143 |
| AvaII | GGWCC | 3 cut(s) | 1053, 3175, 3517 |
| AxyI | CCTNAGG | 3 cut(s) | 54, 2055, 3646 |
| BaeGI | GKGCMC | 3 cut(s) | 1748, 2659, 4244 |
| BalI | TGGCCA | 3 cut(s) | 140, 1202, 2987 |
| BamHI | GGATCC | 2 cut(s) | 49, 166 |
| BanI | GGYRCC | 2 cut(s) | 2654, 3832 |
| BbrPI | CACGTG | 1 cut(s) | 2219 |
| BbsI | GAAGAC | 7 cut(s) | 134, 2415, 3131, 3227, 3428, 3651, 3876 |
| Bbv12I | GWGCWC | 1 cut(s) | 2548 |
| BbvCI | CCTCAGC | 1 cut(s) | 2196 |
| BceAI | ACGGC | 4 cut(s) | 2339, 2526, 3203, 3896 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1769, 1803 |
| BciT130I | CCWGG | 7 cut(s) | 449, 1500, 2123, 3521, 3704, 3830, 4187 |
| BciVI | GTATCC | 2 cut(s) | 3729, 4327 |
| BclI | TGATCA | 1 cut(s) | 2977 |
| BcnI | CCSGG | 1 cut(s) | 228 |
| BcoDI | GTCTC | 5 cut(s) | 313, 1139, 3133, 3777, 3927 |
| BfaI | CTAG | 8 cut(s) | 906, 1520, 2007, 2180, 4118, 4206, 4365, 4437 |
| BfmI | CTRYAG | 6 cut(s) | 236, 972, 1176, 2808, 4176, 4479 |
| BfoI | RGCGCY | 1 cut(s) | 3836 |
| BfuI | GTATCC | 2 cut(s) | 3729, 4327 |
| BglII | AGATCT | 3 cut(s) | 536, 1046, 3281 |
| BlpI | GCTNAGC | 2 cut(s) | 1713, 1952 |
| BmcAI | AGTACT | 2 cut(s) | 978, 1679 |
| Bme1390I | CCNGG | 8 cut(s) | 228, 449, 1500, 2123, 3521, 3704, 3830, 4187 |
| Bme18I | GGWCC | 3 cut(s) | 1053, 3175, 3517 |
| BmeT110I | CYCGRG | 1 cut(s) | 3143 |
| BmgT120I | GGNCC | 3 cut(s) | 1053, 3175, 3517 |
| BmiI | GGNNCC | 5 cut(s) | 51, 168, 1055, 2656, 3834 |
| BmrFI | CCNGG | 8 cut(s) | 228, 449, 1500, 2123, 3521, 3704, 3830, 4187 |
| BpiI | GAAGAC | 7 cut(s) | 134, 2415, 3131, 3227, 3428, 3651, 3876 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 310, 342, 2530, 2562, 3140, 3172 |
| BpmI | CTGGAG | 2 cut(s) | 2105, 3876 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2196, 3252 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1713, 1952 |
| Bpu14I | TTCGAA | 1 cut(s) | 1277 |
| BpuEI | CTTGAG | 7 cut(s) | 1067, 2557, 2843, 2874, 3002, 3951, 4270 |
| BpuMI | CCSGG | 1 cut(s) | 228 |
| Bsa29I | ATCGAT | 1 cut(s) | 3563 |
| BsaAI | YACGTR | 2 cut(s) | 1665, 2219 |
| BsaBI | GATNNNNATC | 4 cut(s) | 541, 3264, 3286, 3690 |
| BsaHI | GRCGYC | 1 cut(s) | 3833 |
| BsaI | GGTCTC | 1 cut(s) | 1139 |
| BsaJI | CCNNGG | 4 cut(s) | 227, 2122, 3171, 3902 |
| BsaWI | WCCGGW | 1 cut(s) | 2268 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 66, 96, 650, 680 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 185, 2972, 3709, 4123 |
| Bse118I | RCCGGY | 3 cut(s) | 1652, 2526, 3483 |
| Bse1I | ACTGG | 6 cut(s) | 150, 2656, 2966, 3042, 3407, 3449 |
| Bse21I | CCTNAGG | 3 cut(s) | 54, 2055, 3646 |
| Bse3DI | GCAATG | 4 cut(s) | 763, 1509, 4072, 4375 |
| Bse8I | GATNNNNATC | 4 cut(s) | 541, 3264, 3286, 3690 |
| BseBI | CCWGG | 7 cut(s) | 449, 1500, 2123, 3521, 3704, 3830, 4187 |
| BseCI | ATCGAT | 1 cut(s) | 3563 |
| BseDI | CCNNGG | 4 cut(s) | 227, 2122, 3171, 3902 |
| BseJI | GATNNNNATC | 4 cut(s) | 541, 3264, 3286, 3690 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 185, 2972, 3709, 4123 |
| BseMI | GCAATG | 4 cut(s) | 763, 1509, 4072, 4375 |
| BseNI | ACTGG | 6 cut(s) | 150, 2656, 2966, 3042, 3407, 3449 |
| BseRI | GAGGAG | 4 cut(s) | 378, 1070, 1798, 3161 |
| BseSI | GKGCMC | 3 cut(s) | 1748, 2659, 4244 |
| BsgI | GTGCAG | 4 cut(s) | 771, 3998, 4039, 4178 |
| Bsh1236I | CGCG | 3 cut(s) | 727, 1779, 4449 |
| Bsh1285I | CGRYCG | 1 cut(s) | 725 |
| BshFI | GGCC | 6 cut(s) | 140, 1202, 2526, 2987, 3644, 3713 |
| BshNI | GGYRCC | 2 cut(s) | 2654, 3832 |
| BshVI | ATCGAT | 1 cut(s) | 3563 |
| BsiEI | CGRYCG | 1 cut(s) | 725 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2548 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3143 |
| BsiSI | CCGG | 5 cut(s) | 227, 1653, 2269, 2527, 3484 |
| BslFI | GGGAC | 2 cut(s) | 1024, 1039 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 185, 2972, 3709, 4123 |
| BsmAI | GTCTC | 5 cut(s) | 313, 1139, 3133, 3777, 3927 |
| BsmBI | CGTCTC | 1 cut(s) | 3927 |
| BsmFI | GGGAC | 2 cut(s) | 1024, 1039 |
| BsmI | GAATGC | 4 cut(s) | 2116, 3193, 3913, 4410 |
| BsnI | GGCC | 6 cut(s) | 140, 1202, 2526, 2987, 3644, 3713 |
| Bso31I | GGTCTC | 1 cut(s) | 1139 |
| BsoBI | CYCGRG | 1 cut(s) | 3143 |
| Bsp119I | TTCGAA | 1 cut(s) | 1277 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1748, 2548, 2659, 4244 |
| Bsp1407I | TGTACA | 2 cut(s) | 116, 4015 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1713, 1952 |
| BspACI | CCGC | 5 cut(s) | 553, 2162, 2499, 3079, 3202 |
| BspANI | GGCC | 6 cut(s) | 140, 1202, 2526, 2987, 3644, 3713 |
| BspDI | ATCGAT | 1 cut(s) | 3563 |
| BspFNI | CGCG | 3 cut(s) | 727, 1779, 4449 |
| BspHI | TCATGA | 2 cut(s) | 345, 3268 |
| BspLI | GGNNCC | 5 cut(s) | 51, 168, 1055, 2656, 3834 |
| BspMAI | CTGCAG | 3 cut(s) | 240, 976, 1180 |
| BspQI | GCTCTTC | 2 cut(s) | 2691, 3069 |
| BspT104I | TTCGAA | 1 cut(s) | 1277 |
| BspT107I | GGYRCC | 2 cut(s) | 2654, 3832 |
| BspTNI | GGTCTC | 1 cut(s) | 1139 |
| BsrBI | CCGCTC | 2 cut(s) | 2162, 3079 |
| BsrDI | GCAATG | 4 cut(s) | 763, 1509, 4072, 4375 |
| BsrFI | RCCGGY | 3 cut(s) | 1652, 2526, 3483 |
| BsrGI | TGTACA | 2 cut(s) | 116, 4015 |
| BsrI | ACTGG | 6 cut(s) | 150, 2656, 2966, 3042, 3407, 3449 |
| BssAI | RCCGGY | 3 cut(s) | 1652, 2526, 3483 |
| BssECI | CCNNGG | 4 cut(s) | 227, 2122, 3171, 3902 |
| BssNI | GRCGYC | 1 cut(s) | 3833 |
| BssT1I | CCWWGG | 1 cut(s) | 3902 |
| Bst2UI | CCWGG | 7 cut(s) | 449, 1500, 2123, 3521, 3704, 3830, 4187 |
| Bst6I | CTCTTC | 7 cut(s) | 93, 2341, 2691, 2733, 3069, 3813, 4122 |
| BstACI | GRCGYC | 1 cut(s) | 3833 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1837, 1846, 3199 |
| BstAUI | TGTACA | 2 cut(s) | 116, 4015 |
| BstBAI | YACGTR | 2 cut(s) | 1665, 2219 |
| BstBI | TTCGAA | 1 cut(s) | 1277 |
| BstEII | GGTNACC | 1 cut(s) | 1132 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 183, 3707, 4121 |
| BstFNI | CGCG | 3 cut(s) | 727, 1779, 4449 |
| BstH2I | RGCGCY | 1 cut(s) | 3836 |
| BstHHI | GCGC | 4 cut(s) | 1198, 3702, 3835, 4449 |
| BstMAI | GTCTC | 5 cut(s) | 313, 1139, 3133, 3777, 3927 |
| BstMCI | CGRYCG | 1 cut(s) | 725 |
| BstNI | CCWGG | 7 cut(s) | 449, 1500, 2123, 3521, 3704, 3830, 4187 |
| BstNSI | RCATGY | 3 cut(s) | 1397, 1537, 2094 |
| BstPI | GGTNACC | 1 cut(s) | 1132 |
| BstSCI | CCNGG | 8 cut(s) | 226, 447, 1498, 2121, 3519, 3702, 3828, 4185 |
| BstSFI | CTRYAG | 6 cut(s) | 236, 972, 1176, 2808, 4176, 4479 |
| BstSLI | GKGCMC | 3 cut(s) | 1748, 2659, 4244 |
| BstSNI | TACGTA | 1 cut(s) | 1665 |
| BstUI | CGCG | 3 cut(s) | 727, 1779, 4449 |
| BstV2I | GAAGAC | 7 cut(s) | 134, 2415, 3131, 3227, 3428, 3651, 3876 |
| BstX2I | RGATCY | 8 cut(s) | 29, 49, 166, 536, 1046, 1165, 1267, 3281 |
| BstYI | RGATCY | 8 cut(s) | 29, 49, 166, 536, 1046, 1165, 1267, 3281 |
| Bsu15I | ATCGAT | 1 cut(s) | 3563 |
| Bsu36I | CCTNAGG | 3 cut(s) | 54, 2055, 3646 |
| BsuI | GTATCC | 2 cut(s) | 3729, 4327 |
| BsuRI | GGCC | 6 cut(s) | 140, 1202, 2526, 2987, 3644, 3713 |
| BsuTUI | ATCGAT | 1 cut(s) | 3563 |
| BtsI | GCAGTG | 2 cut(s) | 1173, 2085 |
| CaiI | CAGNNNCTG | 5 cut(s) | 695, 1019, 1073, 1175, 2972 |
| CciI | TCATGA | 2 cut(s) | 345, 3268 |
| CfoI | GCGC | 4 cut(s) | 1198, 3702, 3835, 4449 |
| Cfr10I | RCCGGY | 3 cut(s) | 1652, 2526, 3483 |
| Cfr13I | GGNCC | 3 cut(s) | 1053, 3175, 3517 |
| ClaI | ATCGAT | 1 cut(s) | 3563 |
| CseI | GACGC | 1 cut(s) | 3909 |
| CsiI | ACCWGGT | 1 cut(s) | 1498 |
| Csp6I | GTAC | 9 cut(s) | 117, 495, 811, 895, 977, 1678, 2377, 3574, 4016 |
| CviQI | GTAC | 9 cut(s) | 117, 495, 811, 895, 977, 1678, 2377, 3574, 4016 |
| DinI | GGCGCC | 1 cut(s) | 3834 |
| DraI | TTTAAA | 1 cut(s) | 264 |
| DraIII | CACNNNGTG | 1 cut(s) | 2588 |
| EaeI | YGGCCR | 3 cut(s) | 138, 1200, 2985 |
| Eam1104I | CTCTTC | 7 cut(s) | 93, 2341, 2691, 2733, 3069, 3813, 4122 |
| EarI | CTCTTC | 7 cut(s) | 93, 2341, 2691, 2733, 3069, 3813, 4122 |
| Eco105I | TACGTA | 1 cut(s) | 1665 |
| Eco130I | CCWWGG | 1 cut(s) | 3902 |
| Eco31I | GGTCTC | 1 cut(s) | 1139 |
| Eco32I | GATATC | 3 cut(s) | 1474, 2000, 2129 |
| Eco47I | GGWCC | 3 cut(s) | 1053, 3175, 3517 |
| Eco57I | CTGAAG | 3 cut(s) | 647, 2409, 2645 |
| Eco72I | CACGTG | 1 cut(s) | 2219 |
| Eco81I | CCTNAGG | 3 cut(s) | 54, 2055, 3646 |
| Eco88I | CYCGRG | 1 cut(s) | 3143 |
| Eco91I | GGTNACC | 1 cut(s) | 1132 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 183, 3707, 4121 |
| EcoO65I | GGTNACC | 1 cut(s) | 1132 |
| EcoRII | CCWGG | 7 cut(s) | 447, 1498, 2121, 3519, 3702, 3828, 4185 |
| EcoRV | GATATC | 3 cut(s) | 1474, 2000, 2129 |
| EcoT14I | CCWWGG | 1 cut(s) | 3902 |
| EgeI | GGCGCC | 1 cut(s) | 3834 |
| EheI | GGCGCC | 1 cut(s) | 3834 |
| ErhI | CCWWGG | 1 cut(s) | 3902 |
| Esp3I | CGTCTC | 1 cut(s) | 3927 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1098, 1130 |
| FaqI | GGGAC | 2 cut(s) | 1024, 1039 |
| FauI | CCCGC | 1 cut(s) | 2155 |
| FauNDI | CATATG | 4 cut(s) | 2245, 3537, 3754, 4006 |
| FbaI | TGATCA | 1 cut(s) | 2977 |
| FblI | GTMKAC | 1 cut(s) | 192 |
| FspBI | CTAG | 8 cut(s) | 906, 1520, 2007, 2180, 4118, 4206, 4365, 4437 |
| GlaI | GCGC | 4 cut(s) | 1197, 3701, 3834, 4448 |
| GsuI | CTGGAG | 2 cut(s) | 2105, 3876 |
| HaeII | RGCGCY | 1 cut(s) | 3836 |
| HaeIII | GGCC | 6 cut(s) | 140, 1202, 2526, 2987, 3644, 3713 |
| HapII | CCGG | 5 cut(s) | 227, 1653, 2269, 2527, 3484 |
| HgaI | GACGC | 1 cut(s) | 3909 |
| HhaI | GCGC | 4 cut(s) | 1198, 3702, 3835, 4449 |
| Hin1I | GRCGYC | 1 cut(s) | 3833 |
| Hin6I | GCGC | 4 cut(s) | 1196, 3700, 3833, 4447 |
| HinP1I | GCGC | 4 cut(s) | 1196, 3700, 3833, 4447 |
| HincII | GTYRAC | 2 cut(s) | 737, 4300 |
| HindII | GTYRAC | 2 cut(s) | 737, 4300 |
| HindIII | AAGCTT | 3 cut(s) | 1571, 2627, 3065 |
| HpaII | CCGG | 5 cut(s) | 227, 1653, 2269, 2527, 3484 |
| Hpy166II | GTNNAC | 8 cut(s) | 193, 307, 380, 737, 1121, 1240, 2780, 4300 |
| Hpy8I | GTNNAC | 8 cut(s) | 193, 307, 380, 737, 1121, 1240, 2780, 4300 |
| Hpy99I | CGWCG | 1 cut(s) | 3881 |
| HpyAV | CCTTC | 6 cut(s) | 1030, 2912, 3392, 3790, 4049, 4513 |
| HpyCH4IV | ACGT | 8 cut(s) | 1123, 1559, 1600, 1664, 1885, 2015, 2218, 2480 |
| HpySE526I | ACGT | 8 cut(s) | 1123, 1559, 1600, 1664, 1885, 2015, 2218, 2480 |
| Hsp92I | GRCGYC | 1 cut(s) | 3833 |
| HspAI | GCGC | 4 cut(s) | 1196, 3700, 3833, 4447 |
| KasI | GGCGCC | 1 cut(s) | 3832 |
| KroI | GCCGGC | 1 cut(s) | 2526 |
| KroNI | GCCGGC | 1 cut(s) | 2528 |
| Ksp22I | TGATCA | 1 cut(s) | 2977 |
| LguI | GCTCTTC | 2 cut(s) | 2691, 3069 |
| LmnI | GCTCC | 5 cut(s) | 476, 562, 658, 692, 2956 |
| MabI | ACCWGGT | 1 cut(s) | 1498 |
| MaeI | CTAG | 8 cut(s) | 906, 1520, 2007, 2180, 4118, 4206, 4365, 4437 |
| MaeII | ACGT | 8 cut(s) | 1123, 1559, 1600, 1664, 1885, 2015, 2218, 2480 |
| MbiI | CCGCTC | 2 cut(s) | 2162, 3079 |
| MflI | RGATCY | 8 cut(s) | 29, 49, 166, 536, 1046, 1165, 1267, 3281 |
| MhlI | GDGCHC | 4 cut(s) | 1748, 2548, 2659, 4244 |
| MlsI | TGGCCA | 3 cut(s) | 140, 1202, 2987 |
| MluNI | TGGCCA | 3 cut(s) | 140, 1202, 2987 |
| Mly113I | GGCGCC | 1 cut(s) | 3833 |
| MlyI | GAGTC | 6 cut(s) | 587, 2527, 3113, 3135, 3320, 3866 |
| MmeI | TCCRAC | 8 cut(s) | 7, 64, 606, 851, 2661, 3607, 3644, 3900 |
| Mox20I | TGGCCA | 3 cut(s) | 140, 1202, 2987 |
| MroNI | GCCGGC | 1 cut(s) | 2526 |
| MroXI | GAANNNNTTC | 1 cut(s) | 311 |
| MscI | TGGCCA | 3 cut(s) | 140, 1202, 2987 |
| MslI | CAYNNNNRTG | 5 cut(s) | 333, 1741, 2248, 2331, 3348 |
| Msp20I | TGGCCA | 3 cut(s) | 140, 1202, 2987 |
| MspA1I | CMGCKG | 3 cut(s) | 2429, 2501, 3242 |
| MspI | CCGG | 5 cut(s) | 227, 1653, 2269, 2527, 3484 |
| MspR9I | CCNGG | 8 cut(s) | 228, 449, 1500, 2123, 3521, 3704, 3830, 4187 |
| Mva1269I | GAATGC | 4 cut(s) | 2116, 3193, 3913, 4410 |
| MvaI | CCWGG | 7 cut(s) | 449, 1500, 2123, 3521, 3704, 3830, 4187 |
| MvnI | CGCG | 3 cut(s) | 727, 1779, 4449 |
| NaeI | GCCGGC | 1 cut(s) | 2528 |
| NarI | GGCGCC | 1 cut(s) | 3833 |
| NciI | CCSGG | 1 cut(s) | 228 |
| NdeI | CATATG | 4 cut(s) | 2245, 3537, 3754, 4006 |
| NgoMIV | GCCGGC | 1 cut(s) | 2526 |
| NlaIV | GGNNCC | 5 cut(s) | 51, 168, 1055, 2656, 3834 |
| NmuCI | GTSAC | 4 cut(s) | 1132, 1620, 2083, 3207 |
| NspI | RCATGY | 3 cut(s) | 1397, 1537, 2094 |
| NspV | TTCGAA | 1 cut(s) | 1277 |
| PaeI | GCATGC | 1 cut(s) | 2094 |
| PaeR7I | CTCGAG | 1 cut(s) | 3143 |
| PagI | TCATGA | 2 cut(s) | 345, 3268 |
| PciSI | GCTCTTC | 2 cut(s) | 2691, 3069 |
| PctI | GAATGC | 4 cut(s) | 2116, 3193, 3913, 4410 |
| PdiI | GCCGGC | 1 cut(s) | 2528 |
| PdmI | GAANNNNTTC | 1 cut(s) | 311 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2972 |
| PleI | GAGTC | 6 cut(s) | 586, 2526, 3112, 3135, 3319, 3866 |
| PluTI | GGCGCC | 1 cut(s) | 3836 |
| PmaCI | CACGTG | 1 cut(s) | 2219 |
| PmlI | CACGTG | 1 cut(s) | 2219 |
| PpsI | GAGTC | 6 cut(s) | 586, 2526, 3112, 3135, 3319, 3866 |
| Ppu21I | YACGTR | 2 cut(s) | 1665, 2219 |
| PshBI | ATTAAT | 1 cut(s) | 432 |
| PsiI | TTATAA | 3 cut(s) | 864, 2409, 2594 |
| Psp1406I | AACGTT | 2 cut(s) | 1559, 1600 |
| Psp6I | CCWGG | 7 cut(s) | 447, 1498, 2121, 3519, 3702, 3828, 4185 |
| PspCI | CACGTG | 1 cut(s) | 2219 |
| PspEI | GGTNACC | 1 cut(s) | 1132 |
| PspGI | CCWGG | 7 cut(s) | 447, 1498, 2121, 3519, 3702, 3828, 4185 |
| PspN4I | GGNNCC | 5 cut(s) | 51, 168, 1055, 2656, 3834 |
| PspPI | GGNCC | 3 cut(s) | 1053, 3175, 3517 |
| PspXI | VCTCGAGB | 1 cut(s) | 3143 |
| PstI | CTGCAG | 3 cut(s) | 240, 976, 1180 |
| PstNI | CAGNNNCTG | 5 cut(s) | 695, 1019, 1073, 1175, 2972 |
| PsuI | RGATCY | 8 cut(s) | 29, 49, 166, 536, 1046, 1165, 1267, 3281 |
| PvuII | CAGCTG | 2 cut(s) | 2429, 3242 |
| RsaI | GTAC | 9 cut(s) | 118, 496, 812, 896, 978, 1679, 2378, 3575, 4017 |
| RsaNI | GTAC | 9 cut(s) | 117, 495, 811, 895, 977, 1678, 2377, 3574, 4016 |
| RseI | CAYNNNNRTG | 5 cut(s) | 333, 1741, 2248, 2331, 3348 |
| SapI | GCTCTTC | 2 cut(s) | 2691, 3069 |
| Sau96I | GGNCC | 3 cut(s) | 1053, 3175, 3517 |
| ScaI | AGTACT | 2 cut(s) | 978, 1679 |
| SchI | GAGTC | 6 cut(s) | 587, 2527, 3113, 3135, 3320, 3866 |
| ScrFI | CCNGG | 8 cut(s) | 228, 449, 1500, 2123, 3521, 3704, 3830, 4187 |
| SduI | GDGCHC | 4 cut(s) | 1748, 2548, 2659, 4244 |
| SexAI | ACCWGGT | 1 cut(s) | 1498 |
| SfcI | CTRYAG | 6 cut(s) | 236, 972, 1176, 2808, 4176, 4479 |
| SfoI | GGCGCC | 1 cut(s) | 3834 |
| Sfr274I | CTCGAG | 1 cut(s) | 3143 |
| SfuI | TTCGAA | 1 cut(s) | 1277 |
| SinI | GGWCC | 3 cut(s) | 1053, 3175, 3517 |
| SlaI | CTCGAG | 1 cut(s) | 3143 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 333, 1741, 2248, 2331, 3348 |
| SmlI | CTYRAG | 8 cut(s) | 1082, 2536, 2858, 2889, 3017, 3143, 3966, 4249 |
| SmoI | CTYRAG | 8 cut(s) | 1082, 2536, 2858, 2889, 3017, 3143, 3966, 4249 |
| SnaBI | TACGTA | 1 cut(s) | 1665 |
| SphI | GCATGC | 1 cut(s) | 2094 |
| SsiI | CCGC | 5 cut(s) | 553, 2162, 2499, 3079, 3202 |
| SspDI | GGCGCC | 1 cut(s) | 3832 |
| SspI | AATATT | 2 cut(s) | 994, 3673 |
| SspMI | CTAG | 8 cut(s) | 906, 1520, 2007, 2180, 4118, 4206, 4365, 4437 |
| StyD4I | CCNGG | 8 cut(s) | 226, 447, 1498, 2121, 3519, 3702, 3828, 4185 |
| StyI | CCWWGG | 1 cut(s) | 3902 |
| TaiI | ACGT | 8 cut(s) | 1126, 1562, 1603, 1667, 1888, 2018, 2221, 2483 |
| TaqII | GACCGA | 2 cut(s) | 3192, 3645 |
| TatI | WGTACW | 6 cut(s) | 116, 494, 976, 1677, 2376, 4015 |
| TseFI | GTSAC | 4 cut(s) | 1132, 1620, 2083, 3207 |
| Tsp45I | GTSAC | 4 cut(s) | 1132, 1620, 2083, 3207 |
| TspGWI | ACGGA | 4 cut(s) | 1688, 2723, 3601, 3652 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2972 |
| VpaK11BI | GGWCC | 3 cut(s) | 1053, 3175, 3517 |
| VspI | ATTAAT | 1 cut(s) | 432 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 183, 3707, 4121 |
| XbaI | TCTAGA | 1 cut(s) | 4205 |
| XceI | RCATGY | 3 cut(s) | 1397, 1537, 2094 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2677, 3900 |
| XhoI | CTCGAG | 1 cut(s) | 3143 |
| XmiI | GTMKAC | 1 cut(s) | 192 |
| XmnI | GAANNNNTTC | 1 cut(s) | 311 |
| XspI | CTAG | 8 cut(s) | 906, 1520, 2007, 2180, 4118, 4206, 4365, 4437 |
| ZrmI | AGTACT | 2 cut(s) | 978, 1679 |