MD13G1226900.v1.1
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Forward (+)
22155983 .. 22183501
27519 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1226900.v1.1.491

Sequence Viewer

Length: 4563 bp
ATGGACGTGCTGATTATTTCATTGTCCACACAGGCTGCCAATGTCAATTTGGCAGTAGGATCTCATGTTTGGGTCGAGGATTCTGAGAAAGCCTGGATTGATGGCGAAGTTGTAGGAGTCAATGATGAAGAGATTGAAATAAACTGTACATCAGGGAAGACGGTTACAGCCAAAGCATCCAGTGTCTACCCAAAGGATCCTGAATTTCCTCAATGTGGTGTAGATGATATGACTAAGTTGGCTTATCTGCATGAACCAGGGGTTTTGCAGAATTTAAAAAGTAGATACTGTGTAAACGAAATATATACTTATACAGGAAGTATATTGATAGCTGTGAATCCCTTCCGGAGACTACCTCATTTATATGATAATCATATGATGGAACAGTATAAAGGTGTGGCTTTAGGTGAGCTGAGCCCACACCCTTTTGCTATTGCTGATGCTGCCTATAGACAGATGATTAACGAGGGAATAAGCCAGGCAATTTTGGTCAGTGGGGAAAGTGGAGCCGGGAAAACAGAGAGTACAAAGATGCTTATGCGTTATCTTGCCTATATGGGTGGAAGAGCTGTATCTGAGGGGCGGTCTGTGGAACAGCAAGTCTTGGAGTCTAACCCTGTTCTTGAAGCATTTGGTAATGCAAAGACTGTCCGAAACAATAATTCCAGTGGAAGTCGTTTTGGTAAGTTCGTGGAGATTCAGTTTGATCAAACAGGGAGAATCTCAGGAGCTGCCATTAGAACTTATTTATTGGAGCGATCCAGAGTTTGTCAAGTATCTGATCCAGAGAGAAATTACCATTGCTTTTATATGCTCTGTTCTGCACCTCCAGAGGATGTTGAGAAGTACAAATTGGGAAATCCGAGAACATTTCATTATTTAAATCAGTCCAACTGCTATGAGCTGGATGGGGTGGACGATTCAGAGGAGTATCTCACAACTAGGAAAGCTATGGATGTGGTTGGGATAAGTTCTGAGGAGCAGGATGGAATATTTCGAGTTGTAGCTGCAATACTTCATTTAGGCAACGTTAACTTTGCAAAGGGGAATGAATCTGATTCTTCTGAACCCAAGGATGATAACTCTCGGTTCCATCTCAAAACTGCTGCTGAACTTTTCATGTGTGATGAGCAATCTCTTGAAGATTCTCTGTGCAAACGTGTGATGGTGACCCGTGATGAGACCATAAAGAAAAGCTTAGATCCAGATTCCGCAGCCATCAGTAGAGATGCATTGGCCAAAATTGTTTATTCAAGGTTATTTGATTGGCTTGTGAACAAGATAAACAACACTATTGGTCAGGATCCTGATTCAAAATATTTGATTGGAGTTCTGGATATTTATGGATTCGAGAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATCAATTTGACAAATGAAAAATTGCAGCAGCATTTCAACCAGCATGTGTTCAAGATGGAGCAAGAAGAATATACTAAAGAAGAAATTGATTGGAGTTACATAGAGTTCATCGATAATCAGGATGTTCTTGATCTCATTGAAAAGAAGCCCGGTGGCATCTTTGCTCTTCTGGATGAGGCTTGTATGTTCCCGAGATCAACCCATGAAACATTTTCACAGAAGCTTTATCAAACTTTTAAAGACCATAAACGTTTTAACAAGCCAAAATTGTCGCCTACCGACTTTACCATTTGCCATTATGCCGGTGATGTTACTTATCAAACAGAGTTCTTCCTGGATAAGAACAAAGATTATGTTGTTGCAGAGCATCAAGCACTCCTTAGTGCCTCCAAATGCCCTTTTGTTTCAGGCTTGTTCCCTCCTTTACCCGAAGAATCTGCCAAACAATCAAAGTTCTCATCAATAGGTTCTCGATTCAAGCAACAACTGCAATCATTGCTTGAAACGCTAAGTGCCATTGAGCCTCACTACATACGCTGTGTAAAGCCAAATAATCAACTCAAACCTGCCATATTTGAAAATAGCGCTGTTTTACAGCAGCTTTGCTGTGGGGGAGTAATGGAGGCCATTCGGATTAGTTGTGCTGGATATCCAACTAGAAAGACCTTTGGAGAATTTACAAGTCGTTTTAAAATTCTGGCACCTGAGGTTCTAAATGGAAGCGTTGATGAGGTCACTGCATGCAAGAAGCTATTACAAAAGGTCAACCTCAAGGGATATCAGGTTGGGAAAACAAAAGTGTTCCTCAGGGCTGGTCAAATGGCAGAACTAGATGCATATAGAAGTGAGGTATTGGGAAGATCGGCTAGTGTTATCCAGAGAAAAGTTCGCTCCTACCTATGTCGCAAAAAATTTGTCTTGTTGCGGTTGTCTGCCATCCAAATCCAAGGCTTATGTAGAGGACAAGTTGCACGCCACCGATATGAAAACATGAGAAGGGAAGCTGCTTCTGTGATTATCCAGAAATATGGTCGCTCGTATCTTTCTAGGAATGGTTATAAAAACTTGTGCTCTTCAGCTGTGTCTATTCAAATTGGTATGCGCGGGTTGGCTGCTCGTAAGGAGCTTAGTTCCAGGAAGAAAACAAGGGCTGCAACTGTGATACAGAGTCATTGCCGGAAACACTTAGCACATGCTCATTATTTGAGGATGAAGAATGCAGCTATTGCCATACAATGTGGTTGGAGACGAGTAGTTGCTCGTAGAGAGTTGCGGAGGCTAAAGATGGCTGCTAAGGAAACTGGTGCTCTCCAAGAAGCCAAAAATAAGTTGGAAAAGGAAGTTGAAGAGCTAACCTGGCGCCTGCAACTGGAGAAGCGAATGAGGGCTGATATGGAAGAGGCCAAAACAAAGGAAAATGCGAAGTTGCAGTCTGCTTTGAAAGAGATGCAACTTGAATTTCAAGAAACTAAATCCCTGCTTATGAAGGAACGTGAGGCTGCAGCAAAAGCATCAGAGGAGGCAGCAAAAGCGGCTGAGGCTGCAGCAAAAGTAGCTGAACAAATGCCAGTCGTACAGGAGATTTCAGTTGTGGATCAGGAAATAGTCAATAAGCTTACTGCCGAAAATGAGCAGCTTAAGGCCCTGGTGGATTCACTGGAAAAGAAGATTGATGAAACAGAGAAAAAGTTTGAAGAAACAAGCAGGCTTAGTGAACAGCGGCTCAAGCAGGCTACGGAGGCAGAATCGAAGATAATTGATTTGAAGACTGCCATGCAGAGGCTAGAAGAAAAACTTTCTGACATAGAAACCGAGGACCATATTTTGCGTCAGCAAGCATTAAAGATGTCAGCTTCTATGAAAATGTCAGAGCATTTGGCTGGAGCACCAGCTCAGCCTTTGGGGAATGGTCATCATGAACCACTGAGAACTACACCGTCCAAGAAATTTGGCTCAGAGTCTTTCAGGAGATCCCAAATTGAAAGGCAACATGAGGGTGTAGATACTCTTATGAAATTAGTGACAGGTAATCTTGGATTCAGTGAAGGAAAGCCAGTTGCAGCAATAACAACATACAAATGTCTTCTGCACTGGAGATTATTTGAAGCGGAAAAAACTAGTGTATTTGACCGACTTATTCAGATAATTGGTTCTGCAATTGAGGACCAGGATAACATTGATCATATGGCTTATTGGCTTTCCAATACATCTACATTGTTGTTCTTGCTCCAGCGGAGCTTAAGAACTGCTCCACGAAAGCCTCCTACCCCCACATCTTTATTTGGAAGGATGACCCAAGGCTTCCGATCTTCTTCTGCCAATCTTTCAGTTGGTGCTTCTGATTTAGTACGTCAGGTTGAGGCCAAGTATCCAGCTTTGCTCTTTAAGCAGCAACTTACAGCATATGTGGAAAAGATATATGGAATCGTCCGAGACAATTTGAAGAAGGAATTGTCACTTCATCTTTCTTCTTGCATCCAGGCACCCAAAACGGCAAAAGGTGGTGTTTCAAAATCACCCGAAGGATCAACTGGGAACAGTCCTCGGGCTAATCCTTGGAATAGCATCATCGCAAATCTTAATGGGTTTCTCACTACATTTAAAGAAAATTGTGTGCCTCCAATTATTGTTCAGAAGATATTTACTCAAATGTTCTCATACATCAATGTACAGATTTTTAATAGCCTTCTTCTTCGTCGAGAGTGCTGCACCTTCAGCAATGGCCAATATGTGAAGAATGGGCTAGCTGAATTGGAGCTATGGTGTAGCCTAGCAAAAGAAGAGTATGCTGGCTCATCATGGGATGAACTCAAATATGTTAGGCAGGCTGTAGGATTCTTGGTTCTACACCAAAAGTCCAGAATCTCCTATGATGAACTAACAAATGACCTATGCCCTGTCTTGAGTGTTCAACAACTTCATAGAGTATGCACACTATTTTTGGATGATGATTACAACACGCAAAGTGTTTCCCCTGATGTCATTTCCAGCATGAACTTTCTAATGACAGATGACTCCAGCAGTGATGATAGCAGCTCCTTCTTGCTGGATGACAATTCCAGCATTCCTTTCTCGATTGAAGATATATCTAGTTCCATGCAAGACCAGAGCTATTCAGATGTAAAACCTCCCGCAGAACTTTCGGAGAATCAAGACTTCCAATTTTTACAGGAGTAA

Protein Analysis

1521

Amino Acids

171.48

Weight (kDa)

6.72

Isoelectric Point (pI)

48.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myosin_N PF02736 19 - 62 8.2e-12 Myosin N-terminal SH3-like domain
Myosin_head PF00063 74 - 732 3.1e-256 Myosin head (motor domain)
DIL PF01843 1341 - 1445 8.9e-27 DIL domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2445
Acc36I ACCTGC 1 cut(s) 1960
AccB1I GGYRCC 3 cut(s) 2086, 2745, 3868
AccI GTMKAC 1 cut(s) 186
AccII CGCG 1 cut(s) 2490
AccIII TCCGGA 1 cut(s) 345
AclI AACGTT 2 cut(s) 1029, 1636
AcoI YGGCCR 2 cut(s) 1236, 4108
AcsI RAATTY 7 cut(s) 203, 271, 2060, 2079, 2297, 2843, 3332
AcuI CTGAAG 2 cut(s) 2445, 4084
AcyI GRCGYC 1 cut(s) 2746
AfaI GTAC 6 cut(s) 148, 526, 848, 2961, 3735, 4056
AfeI AGCGCT 1 cut(s) 1972
AfiI CCNNNNNNNGG 3 cut(s) 215, 2755, 3165
AflII CTTAAG 2 cut(s) 3023, 3625
AflIII ACRYGT 1 cut(s) 1159
AhlI ACTAGT 1 cut(s) 3503
AjiI CACGTC 1 cut(s) 7
AjnI CCWGG 9 cut(s) 92, 256, 477, 1719, 2519, 2741, 3030, 3552, 3864
AjuI GAANNNNNNNTTGG 2 cut(s) 836, 868
AloI GAACNNNNNNTCC 2 cut(s) 4212, 4244
Alw21I GWGCWC 3 cut(s) 2459, 2695, 3274
Alw26I GTCTC 4 cut(s) 343, 1175, 2626, 3813
AlwNI CAGNNNCTG 1 cut(s) 731
Ama87I CYCGRG 2 cut(s) 1576, 3930
Aor13HI TCCGGA 1 cut(s) 345
Aor51HI AGCGCT 1 cut(s) 1972
AoxI GGCC 6 cut(s) 1236, 2010, 2787, 3027, 3747, 4108
ApoI RAATTY 7 cut(s) 203, 271, 2060, 2079, 2297, 2843, 3332
ArsI GACNNNNNNTTYG 4 cut(s) 2286, 2318, 2801, 2833
Asp700I GAANNNNTTC 1 cut(s) 341
AspLEI GCGC 3 cut(s) 1973, 2490, 2748
AspS9I GGNCC 3 cut(s) 3028, 3202, 3550
AsuC2I CCSGG 2 cut(s) 511, 1536
AsuHPI GGTGA 4 cut(s) 419, 1180, 1703, 3894
AsuNHI GCTAGC 1 cut(s) 4129
AvaI CYCGRG 2 cut(s) 1576, 3930
AvaII GGWCC 2 cut(s) 3202, 3550
AxyI CCTNAGG 2 cut(s) 2091, 2192
BalI TGGCCA 2 cut(s) 1238, 4110
BamHI GGATCC 2 cut(s) 196, 1303
BanI GGYRCC 3 cut(s) 2086, 2745, 3868
BanII GRGCYC 1 cut(s) 419
BbsI GAAGAC 3 cut(s) 164, 3158, 3461
Bbv12I GWGCWC 3 cut(s) 2459, 2695, 3274
BbvCI CCTCAGC 1 cut(s) 2922
BceAI ACGGC 1 cut(s) 3894
BcgI CGANNNNNNTGC 6 cut(s) 1805, 1839, 4074, 4108, 4509, 4543
BciT130I CCWGG 9 cut(s) 94, 258, 479, 1721, 2521, 2743, 3032, 3554, 3866
BciVI GTATCC 1 cut(s) 3765
BclI TGATCA 2 cut(s) 706, 3565
BcnI CCSGG 2 cut(s) 511, 1536
BcoDI GTCTC 4 cut(s) 343, 1175, 2626, 3813
BcuI ACTAGT 1 cut(s) 3503
BfmI CTRYAG 4 cut(s) 448, 2886, 2928, 4215
BfoI RGCGCY 2 cut(s) 1974, 2749
BfrI CTTAAG 2 cut(s) 3023, 3625
BfuAI ACCTGC 1 cut(s) 1960
BfuI GTATCC 1 cut(s) 3765
BlpI GCTNAGC 2 cut(s) 413, 3279
Bme18I GGWCC 2 cut(s) 3202, 3550
BmeT110I CYCGRG 2 cut(s) 1576, 3930
BmgBI CACGTC 1 cut(s) 7
BmgT120I GGNCC 3 cut(s) 3028, 3202, 3550
BmiI GGNNCC 7 cut(s) 198, 508, 1091, 1305, 2088, 2747, 3870
BmrI ACTGGG 1 cut(s) 3927
BmtI GCTAGC 1 cut(s) 4133
BmuI ACTGGG 1 cut(s) 3927
BpiI GAAGAC 3 cut(s) 164, 3158, 3461
BplI GAGNNNNNCTC 2 cut(s) 340, 372
BpmI CTGGAG 6 cut(s) 813, 2777, 3288, 3499, 3599, 4387
Bpu10I CCTNAGC 2 cut(s) 2679, 2922
Bpu1102I GCTNAGC 2 cut(s) 413, 3279
BpuEI CTTGAG 3 cut(s) 2141, 3095, 4309
BpuMI CCSGG 2 cut(s) 511, 1536
Bsa29I ATCGAT 1 cut(s) 1497
BsaHI GRCGYC 1 cut(s) 2746
BsaI GGTCTC 1 cut(s) 1175
BsaJI CCNNGG 8 cut(s) 257, 1071, 2332, 3030, 3198, 3682, 3929, 3941
BsaWI WCCGGW 1 cut(s) 345
BsaXI ACNNNNNCTCC 4 cut(s) 686, 716, 4133, 4163
Bsc4I CCNNNNNNNGG 3 cut(s) 215, 2755, 3165
Bse118I RCCGGY 1 cut(s) 1688
Bse1I ACTGG 9 cut(s) 180, 666, 2692, 2760, 2954, 3048, 3440, 3482, 3922
Bse21I CCTNAGG 2 cut(s) 2091, 2192
Bse3DI GCAATG 4 cut(s) 799, 1880, 2557, 4111
BseAI TCCGGA 1 cut(s) 345
BseBI CCWGG 9 cut(s) 94, 258, 479, 1721, 2521, 2743, 3032, 3554, 3866
BseCI ATCGAT 1 cut(s) 1497
BseDI CCNNGG 8 cut(s) 257, 1071, 2332, 3030, 3198, 3682, 3929, 3941
BseLI CCNNNNNNNGG 3 cut(s) 215, 2755, 3165
BseMI GCAATG 4 cut(s) 799, 1880, 2557, 4111
BseNI ACTGG 9 cut(s) 180, 666, 2692, 2760, 2954, 3048, 3440, 3482, 3922
BseRI GAGGAG 3 cut(s) 941, 992, 2918
BsgI GTGCAG 3 cut(s) 807, 3458, 4078
Bsh1236I CGCG 1 cut(s) 2490
BshFI GGCC 6 cut(s) 1238, 2012, 2789, 3029, 3749, 4110
BshNI GGYRCC 3 cut(s) 2086, 2745, 3868
BshVI ATCGAT 1 cut(s) 1497
BsiHKAI GWGCWC 3 cut(s) 2459, 2695, 3274
BsiHKCI CYCGRG 2 cut(s) 1576, 3930
BsiSI CCGG 5 cut(s) 346, 510, 1536, 1689, 2563
BslI CCNNNNNNNGG 3 cut(s) 215, 2755, 3165
BsmAI GTCTC 4 cut(s) 343, 1175, 2626, 3813
BsmBI CGTCTC 1 cut(s) 2626
BsmI GAATGC 2 cut(s) 2608, 4449
BsnI GGCC 6 cut(s) 1238, 2012, 2789, 3029, 3749, 4110
Bso31I GGTCTC 1 cut(s) 1175
BsoBI CYCGRG 2 cut(s) 1576, 3930
Bsp1286I GDGCHC 4 cut(s) 419, 2459, 2695, 3274
Bsp13I TCCGGA 1 cut(s) 345
Bsp1407I TGTACA 2 cut(s) 146, 4054
Bsp1720I GCTNAGC 2 cut(s) 413, 3279
BspANI GGCC 6 cut(s) 1238, 2012, 2789, 3029, 3749, 4110
BspDI ATCGAT 1 cut(s) 1497
BspEI TCCGGA 1 cut(s) 345
BspFNI CGCG 1 cut(s) 2490
BspHI TCATGA 1 cut(s) 3301
BspLI GGNNCC 7 cut(s) 198, 508, 1091, 1305, 2088, 2747, 3870
BspMAI CTGCAG 2 cut(s) 2890, 2932
BspMI ACCTGC 1 cut(s) 1960
BspOI GCTAGC 1 cut(s) 4133
BspQI GCTCTTC 4 cut(s) 559, 1557, 2464, 2727
BspT107I GGYRCC 3 cut(s) 2086, 2745, 3868
BspTI CTTAAG 2 cut(s) 3023, 3625
BspTNI GGTCTC 1 cut(s) 1175
BsrDI GCAATG 4 cut(s) 799, 1880, 2557, 4111
BsrFI RCCGGY 1 cut(s) 1688
BsrGI TGTACA 2 cut(s) 146, 4054
BsrI ACTGG 9 cut(s) 180, 666, 2692, 2760, 2954, 3048, 3440, 3482, 3922
BssAI RCCGGY 1 cut(s) 1688
BssECI CCNNGG 8 cut(s) 257, 1071, 2332, 3030, 3198, 3682, 3929, 3941
BssNI GRCGYC 1 cut(s) 2746
BssT1I CCWWGG 4 cut(s) 1071, 2332, 3682, 3941
Bst2UI CCWGG 9 cut(s) 94, 258, 479, 1721, 2521, 2743, 3032, 3554, 3866
Bst4CI ACNGT 8 cut(s) 146, 163, 290, 387, 649, 2545, 3324, 3926
Bst6I CTCTTC 7 cut(s) 123, 559, 1557, 2464, 2727, 2778, 4161
BstACI GRCGYC 1 cut(s) 2746
BstAFI CTTAAG 2 cut(s) 3023, 3625
BstAPI GCANNNNNTGC 3 cut(s) 1873, 1882, 2612
BstAUI TGTACA 2 cut(s) 146, 4054
BstC8I GCNNGC 9 cut(s) 2128, 2359, 2750, 3092, 3117, 3222, 4131, 4177, 4212
BstEII GGTNACC 1 cut(s) 1168
BstFNI CGCG 1 cut(s) 2490
BstH2I RGCGCY 2 cut(s) 1974, 2749
BstHHI GCGC 3 cut(s) 1973, 2490, 2748
BstMAI GTCTC 4 cut(s) 343, 1175, 2626, 3813
BstNI CCWGG 9 cut(s) 94, 258, 479, 1721, 2521, 2743, 3032, 3554, 3866
BstNSI RCATGY 3 cut(s) 1433, 2130, 2582
BstPI GGTNACC 1 cut(s) 1168
BstSFI CTRYAG 4 cut(s) 448, 2886, 2928, 4215
BstUI CGCG 1 cut(s) 2490
BstV2I GAAGAC 3 cut(s) 164, 3158, 3461
BstX2I RGATCY 5 cut(s) 59, 196, 1201, 1303, 3356
BstXI CCANNNNNNTGG 1 cut(s) 2414
BstYI RGATCY 5 cut(s) 59, 196, 1201, 1303, 3356
Bsu15I ATCGAT 1 cut(s) 1497
Bsu36I CCTNAGG 2 cut(s) 2091, 2192
BsuI GTATCC 1 cut(s) 3765
BsuRI GGCC 6 cut(s) 1238, 2012, 2789, 3029, 3749, 4110
BsuTUI ATCGAT 1 cut(s) 1497
BtgZI GCGATG 1 cut(s) 3940
BtrI CACGTC 1 cut(s) 7
BtsI GCAGTG 2 cut(s) 2121, 4414
BtsIMutI CAGTG 9 cut(s) 187, 499, 673, 2121, 3041, 3308, 3433, 3475, 4414
BveI ACCTGC 1 cut(s) 1960
Cac8I GCNNGC 9 cut(s) 2128, 2359, 2750, 3092, 3117, 3222, 4131, 4177, 4212
CaiI CAGNNNCTG 1 cut(s) 731
CciI TCATGA 1 cut(s) 3301
CfoI GCGC 3 cut(s) 1973, 2490, 2748
Cfr10I RCCGGY 1 cut(s) 1688
Cfr13I GGNCC 3 cut(s) 3028, 3202, 3550
ClaI ATCGAT 1 cut(s) 1497
CseI GACGC 1 cut(s) 3203
Csp6I GTAC 6 cut(s) 147, 525, 847, 2960, 3734, 4055
CviQI GTAC 6 cut(s) 147, 525, 847, 2960, 3734, 4055
DinI GGCGCC 1 cut(s) 2747
DraI TTTAAA 5 cut(s) 276, 882, 1624, 2077, 3988
EaeI YGGCCR 2 cut(s) 1236, 4108
Eam1104I CTCTTC 7 cut(s) 123, 559, 1557, 2464, 2727, 2778, 4161
EarI CTCTTC 7 cut(s) 123, 559, 1557, 2464, 2727, 2778, 4161
Eco130I CCWWGG 4 cut(s) 1071, 2332, 3682, 3941
Eco24I GRGCYC 1 cut(s) 419
Eco31I GGTCTC 1 cut(s) 1175
Eco32I GATATC 2 cut(s) 2036, 2165
Eco47I GGWCC 2 cut(s) 3202, 3550
Eco47III AGCGCT 1 cut(s) 1972
Eco57I CTGAAG 2 cut(s) 2445, 4084
Eco81I CCTNAGG 2 cut(s) 2091, 2192
Eco88I CYCGRG 2 cut(s) 1576, 3930
Eco91I GGTNACC 1 cut(s) 1168
EcoO109I RGGNCCY 1 cut(s) 3028
EcoO65I GGTNACC 1 cut(s) 1168
EcoRII CCWGG 9 cut(s) 92, 256, 477, 1719, 2519, 2741, 3030, 3552, 3864
EcoRV GATATC 2 cut(s) 2036, 2165
EcoT14I CCWWGG 4 cut(s) 1071, 2332, 3682, 3941
EcoT22I ATGCAT 2 cut(s) 1234, 2224
EcoT38I GRGCYC 1 cut(s) 419
EgeI GGCGCC 1 cut(s) 2747
EheI GGCGCC 1 cut(s) 2747
ErhI CCWWGG 4 cut(s) 1071, 2332, 3682, 3941
Esp3I CGTCTC 1 cut(s) 2626
FalI AAGNNNNNCTT 6 cut(s) 1181, 1213, 1749, 1781, 3165, 3197
FauI CCCGC 2 cut(s) 2483, 4525
FauNDI CATATG 3 cut(s) 375, 3570, 3790
FbaI TGATCA 2 cut(s) 706, 3565
FblI GTMKAC 1 cut(s) 186
FriOI GRGCYC 1 cut(s) 419
GlaI GCGC 3 cut(s) 1972, 2489, 2747
GsuI CTGGAG 6 cut(s) 813, 2777, 3288, 3499, 3599, 4387
HaeII RGCGCY 2 cut(s) 1974, 2749
HaeIII GGCC 6 cut(s) 1238, 2012, 2789, 3029, 3749, 4110
HapII CCGG 5 cut(s) 346, 510, 1536, 1689, 2563
HgaI GACGC 1 cut(s) 3203
HhaI GCGC 3 cut(s) 1973, 2490, 2748
Hin1I GRCGYC 1 cut(s) 2746
Hin6I GCGC 3 cut(s) 1971, 2488, 2746
HinP1I GCGC 3 cut(s) 1971, 2488, 2746
HincII GTYRAC 2 cut(s) 1033, 2152
HindII GTYRAC 2 cut(s) 1033, 2152
HindIII AAGCTT 3 cut(s) 1195, 1607, 2999
HpaI GTTAAC 1 cut(s) 1033
HpaII CCGG 5 cut(s) 346, 510, 1536, 1689, 2563
HphI GGTGA 4 cut(s) 419, 1180, 1703, 3894
Hpy166II GTNNAC 8 cut(s) 27, 187, 295, 916, 1033, 1276, 2152, 3101
Hpy8I GTNNAC 8 cut(s) 27, 187, 295, 916, 1033, 1276, 2152, 3101
Hpy99I CGWCG 1 cut(s) 4086
HpyCH4III ACNGT 8 cut(s) 146, 163, 290, 387, 649, 2545, 3324, 3926
HpyCH4IV ACGT 6 cut(s) 6, 1029, 1159, 1636, 2878, 3736
HpySE526I ACGT 6 cut(s) 6, 1029, 1159, 1636, 2878, 3736
Hsp92I GRCGYC 1 cut(s) 2746
HspAI GCGC 3 cut(s) 1971, 2488, 2746
KasI GGCGCC 1 cut(s) 2745
Kpn2I TCCGGA 1 cut(s) 345
Ksp22I TGATCA 2 cut(s) 706, 3565
KspAI GTTAAC 1 cut(s) 1033
LguI GCTCTTC 4 cut(s) 559, 1557, 2464, 2727
MaeII ACGT 6 cut(s) 6, 1029, 1159, 1636, 2878, 3736
MaeIII GTNAC 7 cut(s) 163, 1168, 1481, 1696, 2119, 3406, 3840
MfeI CAATTG 1 cut(s) 3543
MflI RGATCY 5 cut(s) 59, 196, 1201, 1303, 3356
MhlI GDGCHC 4 cut(s) 419, 2459, 2695, 3274
MlsI TGGCCA 2 cut(s) 1238, 4110
MluNI TGGCCA 2 cut(s) 1238, 4110
Mly113I GGCGCC 1 cut(s) 2746
MlyI GAGTC 5 cut(s) 126, 617, 2563, 3353, 4394
MmeI TCCRAC 4 cut(s) 915, 2063, 2609, 2697
Mox20I TGGCCA 2 cut(s) 1238, 4110
Mph1103I ATGCAT 2 cut(s) 1234, 2224
MroI TCCGGA 1 cut(s) 345
MroXI GAANNNNTTC 1 cut(s) 341
MscI TGGCCA 2 cut(s) 1238, 4110
MslI CAYNNNNRTG 4 cut(s) 363, 2367, 3381, 3463
Msp20I TGGCCA 2 cut(s) 1238, 4110
MspA1I CMGCKG 3 cut(s) 2465, 3106, 3619
MspCI CTTAAG 2 cut(s) 3023, 3625
MspI CCGG 5 cut(s) 346, 510, 1536, 1689, 2563
MunI CAATTG 1 cut(s) 3543
Mva1269I GAATGC 2 cut(s) 2608, 4449
MvaI CCWGG 9 cut(s) 94, 258, 479, 1721, 2521, 2743, 3032, 3554, 3866
MvnI CGCG 1 cut(s) 2490
NarI GGCGCC 1 cut(s) 2746
NciI CCSGG 2 cut(s) 511, 1536
NdeI CATATG 3 cut(s) 375, 3570, 3790
NheI GCTAGC 1 cut(s) 4129
NlaIV GGNNCC 7 cut(s) 198, 508, 1091, 1305, 2088, 2747, 3870
NmuCI GTSAC 4 cut(s) 1168, 2119, 3406, 3840
NsiI ATGCAT 2 cut(s) 1234, 2224
NspI RCATGY 3 cut(s) 1433, 2130, 2582
PaeI GCATGC 1 cut(s) 2130
PagI TCATGA 1 cut(s) 3301
PciSI GCTCTTC 4 cut(s) 559, 1557, 2464, 2727
PctI GAATGC 2 cut(s) 2608, 4449
PdmI GAANNNNTTC 1 cut(s) 341
PfoI TCCNGGA 2 cut(s) 1719, 2519
PleI GAGTC 5 cut(s) 125, 616, 2562, 3352, 4394
PluTI GGCGCC 1 cut(s) 2749
PpsI GAGTC 5 cut(s) 125, 616, 2562, 3352, 4394
PsiI TTATAA 1 cut(s) 2445
Psp1406I AACGTT 2 cut(s) 1029, 1636
Psp6I CCWGG 9 cut(s) 92, 256, 477, 1719, 2519, 2741, 3030, 3552, 3864
PspEI GGTNACC 1 cut(s) 1168
PspGI CCWGG 9 cut(s) 92, 256, 477, 1719, 2519, 2741, 3030, 3552, 3864
PspN4I GGNNCC 7 cut(s) 198, 508, 1091, 1305, 2088, 2747, 3870
PspPI GGNCC 3 cut(s) 3028, 3202, 3550
PstI CTGCAG 2 cut(s) 2890, 2932
PstNI CAGNNNCTG 1 cut(s) 731
PsuI RGATCY 5 cut(s) 59, 196, 1201, 1303, 3356
PvuII CAGCTG 1 cut(s) 2465
RsaI GTAC 6 cut(s) 148, 526, 848, 2961, 3735, 4056
RsaNI GTAC 6 cut(s) 147, 525, 847, 2960, 3734, 4055
RseI CAYNNNNRTG 4 cut(s) 363, 2367, 3381, 3463
SapI GCTCTTC 4 cut(s) 559, 1557, 2464, 2727
Sau96I GGNCC 3 cut(s) 3028, 3202, 3550
SchI GAGTC 5 cut(s) 126, 617, 2563, 3353, 4394
SduI GDGCHC 4 cut(s) 419, 2459, 2695, 3274
SfcI CTRYAG 4 cut(s) 448, 2886, 2928, 4215
SfoI GGCGCC 1 cut(s) 2747
SinI GGWCC 2 cut(s) 3202, 3550
SmiI ATTTAAAT 1 cut(s) 882
SmiMI CAYNNNNRTG 4 cut(s) 363, 2367, 3381, 3463
SmlI CTYRAG 5 cut(s) 2156, 3023, 3110, 3625, 4288
SmoI CTYRAG 5 cut(s) 2156, 3023, 3110, 3625, 4288
SpeI ACTAGT 1 cut(s) 3503
SphI GCATGC 1 cut(s) 2130
SspDI GGCGCC 1 cut(s) 2745
SspI AATATT 2 cut(s) 993, 1319
StyI CCWWGG 4 cut(s) 1071, 2332, 3682, 3941
SwaI ATTTAAAT 1 cut(s) 882
TaaI ACNGT 8 cut(s) 146, 163, 290, 387, 649, 2545, 3324, 3926
TaiI ACGT 6 cut(s) 9, 1032, 1162, 1639, 2881, 3739
TaqI TCGA 8 cut(s) 75, 997, 1350, 1497, 1858, 3134, 4084, 4460
TaqII GACCGA 1 cut(s) 3531
TatI WGTACW 4 cut(s) 146, 524, 846, 4054
TauI GCSGC 2 cut(s) 2921, 3109
TscAI CASTG 9 cut(s) 187, 499, 673, 2128, 3048, 3315, 3433, 3482, 4414
TseFI GTSAC 4 cut(s) 1168, 2119, 3406, 3840
Tsp45I GTSAC 4 cut(s) 1168, 2119, 3406, 3840
TspGWI ACGGA 1 cut(s) 3137
TspRI CASTG 9 cut(s) 187, 499, 673, 2128, 3048, 3315, 3433, 3482, 4414
Vha464I CTTAAG 2 cut(s) 3023, 3625
VpaK11BI GGWCC 2 cut(s) 3202, 3550
XapI RAATTY 7 cut(s) 203, 271, 2060, 2079, 2297, 2843, 3332
XceI RCATGY 3 cut(s) 1433, 2130, 2582
XcmI CCANNNNNNNNNTGG 2 cut(s) 46, 2713
XmiI GTMKAC 1 cut(s) 186
XmnI GAANNNNTTC 1 cut(s) 341
Zsp2I ATGCAT 2 cut(s) 1234, 2224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.