FvH4_4g23180

exocyst complex component

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0015851
Physical Location & Seq
Forward (+)
25747381 .. 25749979
2599 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g23180.t1

Sequence Viewer

Length: 2022 bp
ATGGAGAAAACCACACCGGCGCCTGAAAAGTCCGCGAGTTTTCCTAGACAACAATCCGGCAAAAAGAACATCTTTTCAGGCCCCACCACTCCAAGAAAACGCTATGACACCATCGACGAAGAGGAGACAGAAGAGAAAGAAGTTGGCTCCGATCACCAAGACCCTGATGTCCCCGAGATAAGCCACGATGAAGTACTAGAAGAAGTCGATTGCTTCTTGGTTGTCTTGACCGAATCAGCCAAAGAAAAAGAAGACAACCTGCCAGAGGTTCCCGGCTCGGTGGAGACGCTCTGCAAAACCCTAGACGCCATGATAAAGCAATACGGCAAAGGCTCGGCGAGGTTTGGCGAAAACGAGGCCGAAGACTCGCCTTTCGTGGAGGCGGTGATTCGGATATCGAAGGTCTCGACCATTTTAGGGGATATCCCTTCCAACACTGCAACGGCGGAGACGTTGAACCGGACTAGTGCAGTTCTGCAGCGTGCCATGGCCTTATTGGACGAAGAATTTCGCAACCTTCTGAATCAAGATGAGAGTACTAATAATAACAAGAGAGCAGACTCCAACCCTAGCTCAGAGCCAAGCTTGTCTAACAAGTTAACGGCCAAGCTAGCCTCCTTCAACAACCATAACAACAATGATCCGGATCGGAAGCCAGCCGAGGCAACTGAACCGGATCCATTGGAAGAGTTCCCGTCGTTTTCGCCGGAGAGCATCGCCACCATGACAAAAATAGCCACCTGTATGATCGCCTCAGGATACGAGAACGAGTGTTGCATGGTTTACAGCCTTTCACGACGAAATGCATTCAAATCGGCGCTCAACGATCTCGGATACGAAAACATCAGCATTGACGATGTCCAGCGAATGCAATGGGAAGCTCTCGAAGGAGAGATCGCCACGTGGATCAGCGCCGTCAAGACTTGCTCTACCGTTCTCTTTCCCGGAGAGAGGAAGCTCTGCGACGCCGTCTTCGATGGCCACCCTGCCATAGCTGACGACTTGTTCTGCAACCTGGCGCGCACTGTGGTCGTCCAGCTCTTTAACTTCGCCGATGCCGTAGTGCTGACGAAGCGGTCGGCTGAGAAGCTGTTCAAAATATTGGACATGTATGAGTGCCTCCGGGAGCTGGTCCCGGCTATTAAAGGCTTCTATTCAGAGGAGAATGCCAAGGACCTGATCTTTGATGCCGAGGCGGCGAAGAACCGTCTCGGCGAAGCAGCCGTGAGCATATTCTGTGATCTAGAGAATTCTATCAAGTCCGATAACGGAAAAACACCGGTTCCAAGCGGCGCGGTTCACCCCTTGACACGTTACGTCATGAATTATCTAAAATATGCTTGTGAGTACAAGGATTCACTGGAAGAGGTGTTTCAGCAAAACCATGACACACAAGAAAGCAACGGCAGTAACACCCCCGGAACGACGCCGTCCTGGTCGCCGTTTCAGTTGCAGTTGATTACCGTAATGGACATGTTGGACGCGAATTTGGACATGAAGTCTAAGCTGTATAGGGACTCGTCGTTACGGTACATTTTCTTGATGAACAACGGGAGGTACATTATGCAAAAGGTTAAGGGTTCTACTGAGATTCACGAATTGATGGGAAATACGTGGTGTAGAAAGAGGTCGACGGACTTGAGAGGGTACCATAAGAATTACCAGAGGGACACATGGGGAAAGGTCTTGCAGTGCCTCAACCATGAGGGTTTGATGTTGAACGGAAAGGTGTCGAAGCCTGTGCTGAAGGAGAGGTTCAAGAGCTTCAATACACTGTTTGATGAGATACACAAGACGCAGAGCACGTGGGTTGTGAGCGACGAGCAGCTTCAGTCGGAGCTTAGGGTTTCGGTGTCAGCTGTGATGATTCCGGCGTACAGGGCTTTCTGGGGGAGGTTCAAGCAGCACTTGGATTCCGGGAGGCAAACGGAGAAGTATATAAGGTACCAACCGGAAGATATTGAGAATATGATTGATGACTTGTTTGATGGGAACCCTGTTTCTATGGTGAGAAGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006810 GO:0006887 GO:0008150 GO:0009987 GO:0016192 GO:0032940 GO:0046903 GO:0051179 GO:0051234
KEGG Pathways
Metabolic & Signaling
ko04910 map04910
Pfam Domains
Protein Families
Exo70

Protein Analysis

674

Amino Acids

76.12

Weight (kDa)

5.05

Isoelectric Point (pI)

44.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo70_N PF20669 118 - 176 3e-06 Exocyst complex component Exo70 N-terminal
Exo70_C PF03081 301 - 660 3.6e-124 Exo70 exocyst complex subunit C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015851)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G13150
fragaria_vesca FvH4_4g23180
malus_domestica MD13G1124100.v1.1 MD16G1124700.v1.1
prunus_persica Prupe.1G220900_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0429531
rosa_laevigata RLG00000007063
rosa_multiflora Rmu_sc0013305.1_g000004
rosa_roxburghii Rroxscaffold_5G00371230
rosa_rugosa Rorug04G0236900
rosa_samantha Rh4AG292700 Rh4BG298400 Rh4CG313800 Rh4DG295300
rosa_wichuraiana Rw4G025330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 167, 1075
Acc36I ACCTGC 1 cut(s) 267
Acc65I GGTACC 2 cut(s) 1647, 1944
AccB1I GGYRCC 3 cut(s) 19, 1647, 1944
AccI GTMKAC 1 cut(s) 1631
AccII CGCG 4 cut(s) 35, 1021, 1295, 1484
AccIII TCCGGA 1 cut(s) 643
AciI CCGC 7 cut(s) 33, 383, 446, 1075, 1196, 1290, 1295
AclWI GGATC 5 cut(s) 635, 654, 671, 684, 914
AcoI YGGCCR 2 cut(s) 603, 979
AcsI RAATTY 3 cut(s) 506, 1249, 1486
AcuI CTGAAG 2 cut(s) 1766, 1814
AcvI CACGTG 2 cut(s) 903, 1806
AcyI GRCGYC 4 cut(s) 20, 306, 966, 1427
AfaI GTAC 8 cut(s) 195, 538, 1349, 1532, 1559, 1649, 1877, 1946
AfiI CCNNNNNNNGG 4 cut(s) 265, 417, 951, 1129
AflIII ACRYGT 3 cut(s) 1107, 1310, 1473
AgeI ACCGGT 1 cut(s) 1279
AgsI TTSAA 8 cut(s) 457, 622, 811, 1096, 1720, 1759, 1768, 1900
AhdI GACNNNNNGTC 1 cut(s) 1498
AhlI ACTAGT 1 cut(s) 464
AjnI CCWGG 2 cut(s) 1014, 1433
Alw21I GWGCWC 1 cut(s) 1805
Alw26I GTCTC 5 cut(s) 119, 278, 409, 443, 1214
AlwI GGATC 5 cut(s) 635, 654, 671, 684, 914
Ama87I CYCGRG 1 cut(s) 173
Aor13HI TCCGGA 1 cut(s) 643
AoxI GGCC 5 cut(s) 79, 357, 489, 603, 979
ApeKI GCWGC 4 cut(s) 478, 1220, 1825, 1903
ApoI RAATTY 3 cut(s) 506, 1249, 1486
ArsI GACNNNNNNTTYG 6 cut(s) 356, 388, 956, 988, 1166, 1198
AsiGI ACCGGT 1 cut(s) 1279
Asp700I GAANNNNTTC 2 cut(s) 507, 1091
Asp718I GGTACC 2 cut(s) 1647, 1944
AspLEI GCGC 6 cut(s) 22, 820, 914, 1021, 1023, 1295
AspS9I GGNCC 3 cut(s) 80, 1132, 1174
AsuC2I CCSGG 6 cut(s) 273, 945, 1124, 1136, 1419, 1918
AsuHPI GGTGA 4 cut(s) 146, 397, 1292, 2020
AsuNHI GCTAGC 1 cut(s) 610
AvaI CYCGRG 1 cut(s) 173
AvaII GGWCC 2 cut(s) 1132, 1174
AxyI CCTNAGG 1 cut(s) 754
BalI TGGCCA 1 cut(s) 981
BamHI GGATCC 1 cut(s) 676
BanI GGYRCC 3 cut(s) 19, 1647, 1944
BbrPI CACGTG 2 cut(s) 903, 1806
BbsI GAAGAC 3 cut(s) 258, 369, 964
Bbv12I GWGCWC 1 cut(s) 1805
BbvI GCAGC 4 cut(s) 490, 1232, 1837, 1915
BccI CCATC 4 cut(s) 119, 971, 1597, 1982
BcgI CGANNNNNNTGC 6 cut(s) 795, 829, 1012, 1046, 1723, 1757
BciT130I CCWGG 2 cut(s) 1016, 1435
BciVI GTATCC 2 cut(s) 752, 827
BcnI CCSGG 6 cut(s) 273, 945, 1124, 1136, 1419, 1918
BcoDI GTCTC 5 cut(s) 119, 278, 409, 443, 1214
BcuI ACTAGT 1 cut(s) 464
BfaI CTAG 7 cut(s) 45, 197, 302, 465, 570, 611, 1244
BfmI CTRYAG 1 cut(s) 476
BfoI RGCGCY 3 cut(s) 23, 821, 915
BfuAI ACCTGC 1 cut(s) 267
BfuI GTATCC 2 cut(s) 752, 827
BglI GCCNNNNNGGC 1 cut(s) 1196
BisI GCNGC 6 cut(s) 479, 1197, 1221, 1291, 1826, 1904
BlsI GCNGC 6 cut(s) 480, 1198, 1222, 1292, 1827, 1905
BmcAI AGTACT 2 cut(s) 195, 538
Bme1390I CCNGG 8 cut(s) 273, 945, 1016, 1124, 1136, 1419, 1435, 1918
Bme18I GGWCC 2 cut(s) 1132, 1174
BmeRI GACNNNNNGTC 1 cut(s) 1498
BmeT110I CYCGRG 1 cut(s) 173
BmgT120I GGNCC 3 cut(s) 80, 1132, 1174
BmrFI CCNGG 8 cut(s) 273, 945, 1016, 1124, 1136, 1419, 1435, 1918
BmsI GCATC 3 cut(s) 723, 1045, 1177
BmtI GCTAGC 1 cut(s) 614
BpiI GAAGAC 3 cut(s) 258, 369, 964
Bpu10I CCTNAGC 1 cut(s) 1841
BpuEI CTTGAG 1 cut(s) 1660
BpuMI CCSGG 6 cut(s) 273, 945, 1124, 1136, 1419, 1918
BsaAI YACGTR 3 cut(s) 903, 1614, 1806
BsaBI GATNNNNATC 1 cut(s) 645
BsaHI GRCGYC 4 cut(s) 20, 306, 966, 1427
BsaI GGTCTC 1 cut(s) 409
BsaJI CCNNGG 5 cut(s) 486, 660, 1170, 1191, 1417
BsaWI WCCGGW 5 cut(s) 459, 643, 673, 1279, 1951
Bsc4I CCNNNNNNNGG 4 cut(s) 265, 417, 951, 1129
Bse118I RCCGGY 2 cut(s) 16, 1279
Bse1I ACTGG 1 cut(s) 1365
Bse21I CCTNAGG 1 cut(s) 754
Bse3DI GCAATG 1 cut(s) 878
Bse8I GATNNNNATC 1 cut(s) 645
BseAI TCCGGA 1 cut(s) 643
BseBI CCWGG 2 cut(s) 1016, 1435
BseDI CCNNGG 5 cut(s) 486, 660, 1170, 1191, 1417
BseJI GATNNNNATC 1 cut(s) 645
BseLI CCNNNNNNNGG 4 cut(s) 265, 417, 951, 1129
BseMI GCAATG 1 cut(s) 878
BseMII CTCAG 4 cut(s) 588, 768, 1074, 1578
BseNI ACTGG 1 cut(s) 1365
BsePI GCGCGC 1 cut(s) 1019
BseRI GAGGAG 2 cut(s) 137, 1175
BseXI GCAGC 4 cut(s) 490, 1232, 1837, 1915
BsgI GTGCAG 1 cut(s) 489
Bsh1236I CGCG 4 cut(s) 35, 1021, 1295, 1484
Bsh1285I CGRYCG 1 cut(s) 1079
BshFI GGCC 5 cut(s) 81, 359, 491, 605, 981
BshNI GGYRCC 3 cut(s) 19, 1647, 1944
BshTI ACCGGT 1 cut(s) 1279
BsiEI CGRYCG 1 cut(s) 1079
BsiHKAI GWGCWC 1 cut(s) 1805
BsiHKCI CYCGRG 1 cut(s) 173
BslFI GGGAC 4 cut(s) 155, 1118, 1529, 1682
BslI CCNNNNNNNGG 4 cut(s) 265, 417, 951, 1129
BsmAI GTCTC 5 cut(s) 119, 278, 409, 443, 1214
BsmBI CGTCTC 3 cut(s) 278, 443, 1214
BsmFI GGGAC 4 cut(s) 155, 1118, 1529, 1682
BsmI GAATGC 3 cut(s) 806, 873, 1171
BsnI GGCC 5 cut(s) 81, 359, 491, 605, 981
Bso31I GGTCTC 1 cut(s) 409
BsoBI CYCGRG 1 cut(s) 173
Bsp1286I GDGCHC 1 cut(s) 1805
Bsp13I TCCGGA 1 cut(s) 643
Bsp19I CCATGG 1 cut(s) 486
BspACI CCGC 7 cut(s) 33, 383, 446, 1075, 1196, 1290, 1295
BspANI GGCC 5 cut(s) 81, 359, 491, 605, 981
BspCNI CTCAG 4 cut(s) 587, 767, 1075, 1579
BspEI TCCGGA 1 cut(s) 643
BspFNI CGCG 4 cut(s) 35, 1021, 1295, 1484
BspHI TCATGA 1 cut(s) 1320
BspMAI CTGCAG 1 cut(s) 480
BspMI ACCTGC 1 cut(s) 267
BspOI GCTAGC 1 cut(s) 614
BspPI GGATC 5 cut(s) 635, 654, 671, 684, 914
BspT107I GGYRCC 3 cut(s) 19, 1647, 1944
BspTNI GGTCTC 1 cut(s) 409
BsrDI GCAATG 1 cut(s) 878
BsrFI RCCGGY 2 cut(s) 16, 1279
BsrI ACTGG 1 cut(s) 1365
BssAI RCCGGY 2 cut(s) 16, 1279
BssECI CCNNGG 5 cut(s) 486, 660, 1170, 1191, 1417
BssHII GCGCGC 1 cut(s) 1019
BssNI GRCGYC 4 cut(s) 20, 306, 966, 1427
BssT1I CCWWGG 2 cut(s) 486, 1170
Bst2UI CCWGG 2 cut(s) 1016, 1435
Bst4CI ACNGT 6 cut(s) 934, 1027, 1208, 1465, 1530, 1776
Bst6I CTCTTC 4 cut(s) 114, 126, 681, 1359
BstACI GRCGYC 4 cut(s) 20, 306, 966, 1427
BstBAI YACGTR 3 cut(s) 903, 1614, 1806
BstC8I GCNNGC 4 cut(s) 483, 612, 657, 1021
BstDEI CTNAG 6 cut(s) 574, 754, 1083, 1503, 1587, 1841
BstDSI CCRYGG 1 cut(s) 486
BstENI CCTNNNNNAGG 1 cut(s) 263
BstFNI CGCG 4 cut(s) 35, 1021, 1295, 1484
BstH2I RGCGCY 3 cut(s) 23, 821, 915
BstHHI GCGC 6 cut(s) 22, 820, 914, 1021, 1023, 1295
BstMAI GTCTC 5 cut(s) 119, 278, 409, 443, 1214
BstMCI CGRYCG 1 cut(s) 1079
BstMWI GCNNNNNNNGC 4 cut(s) 611, 1072, 1196, 1880
BstNI CCWGG 2 cut(s) 1016, 1435
BstNSI RCATGY 2 cut(s) 1111, 1477
BstSCI CCNGG 8 cut(s) 271, 943, 1014, 1122, 1134, 1417, 1433, 1916
BstSFI CTRYAG 1 cut(s) 476
BstUI CGCG 4 cut(s) 35, 1021, 1295, 1484
BstV1I GCAGC 4 cut(s) 490, 1232, 1837, 1915
BstV2I GAAGAC 3 cut(s) 258, 369, 964
BstX2I RGATCY 1 cut(s) 676
BstYI RGATCY 1 cut(s) 676
Bsu36I CCTNAGG 1 cut(s) 754
BsuI GTATCC 2 cut(s) 752, 827
BsuRI GGCC 5 cut(s) 81, 359, 491, 605, 981
BtgI CCRYGG 1 cut(s) 486
BtgZI GCGATG 1 cut(s) 700
BtsI GCAGTG 2 cut(s) 435, 1697
BtsIMutI CAGTG 5 cut(s) 435, 1023, 1358, 1697, 1772
BveI ACCTGC 1 cut(s) 267
Cac8I GCNNGC 4 cut(s) 483, 612, 657, 1021
CciI TCATGA 1 cut(s) 1320
CfoI GCGC 6 cut(s) 22, 820, 914, 1021, 1023, 1295
Cfr10I RCCGGY 2 cut(s) 16, 1279
Cfr13I GGNCC 3 cut(s) 80, 1132, 1174
CseI GACGC 6 cut(s) 295, 314, 974, 1435, 1490, 1804
Csp6I GTAC 8 cut(s) 194, 537, 1348, 1531, 1558, 1648, 1876, 1945
CspAI ACCGGT 1 cut(s) 1279
CviQI GTAC 8 cut(s) 194, 537, 1348, 1531, 1558, 1648, 1876, 1945
DdeI CTNAG 6 cut(s) 574, 754, 1083, 1503, 1587, 1841
DinI GGCGCC 1 cut(s) 21
DrdI GACNNNNNNGTC 2 cut(s) 167, 1075
DriI GACNNNNNGTC 1 cut(s) 1498
DseDI GACNNNNNNGTC 2 cut(s) 167, 1075
EaeI YGGCCR 2 cut(s) 603, 979
Eam1104I CTCTTC 4 cut(s) 114, 126, 681, 1359
Eam1105I GACNNNNNGTC 1 cut(s) 1498
EarI CTCTTC 4 cut(s) 114, 126, 681, 1359
EciI GGCGGA 1 cut(s) 461
Eco130I CCWWGG 2 cut(s) 486, 1170
Eco31I GGTCTC 1 cut(s) 409
Eco32I GATATC 2 cut(s) 396, 424
Eco47I GGWCC 2 cut(s) 1132, 1174
Eco57I CTGAAG 2 cut(s) 1766, 1814
Eco72I CACGTG 2 cut(s) 903, 1806
Eco81I CCTNAGG 1 cut(s) 754
Eco88I CYCGRG 1 cut(s) 173
EcoNI CCTNNNNNAGG 1 cut(s) 263
EcoO109I RGGNCCY 2 cut(s) 80, 1174
EcoRI GAATTC 1 cut(s) 1249
EcoRII CCWGG 2 cut(s) 1014, 1433
EcoRV GATATC 2 cut(s) 396, 424
EcoT14I CCWWGG 2 cut(s) 486, 1170
EcoT22I ATGCAT 1 cut(s) 808
EgeI GGCGCC 1 cut(s) 21
EheI GGCGCC 1 cut(s) 21
ErhI CCWWGG 2 cut(s) 486, 1170
Esp3I CGTCTC 3 cut(s) 278, 443, 1214
FalI AAGNNNNNCTT 4 cut(s) 56, 88, 1892, 1924
FaqI GGGAC 4 cut(s) 155, 1118, 1529, 1682
FblI GTMKAC 1 cut(s) 1631
Fnu4HI GCNGC 6 cut(s) 479, 1197, 1221, 1291, 1826, 1904
Fsp4HI GCNGC 6 cut(s) 479, 1197, 1221, 1291, 1826, 1904
FspBI CTAG 7 cut(s) 45, 197, 302, 465, 570, 611, 1244
GlaI GCGC 6 cut(s) 21, 819, 913, 1020, 1022, 1294
GluI GCNGC 6 cut(s) 479, 1197, 1221, 1291, 1826, 1904
HaeII RGCGCY 3 cut(s) 23, 821, 915
HaeIII GGCC 5 cut(s) 81, 359, 491, 605, 981
HgaI GACGC 6 cut(s) 295, 314, 974, 1435, 1490, 1804
HhaI GCGC 6 cut(s) 22, 820, 914, 1021, 1023, 1295
Hin1I GRCGYC 4 cut(s) 20, 306, 966, 1427
Hin6I GCGC 6 cut(s) 20, 818, 912, 1019, 1021, 1293
HinP1I GCGC 6 cut(s) 20, 818, 912, 1019, 1021, 1293
HincII GTYRAC 2 cut(s) 600, 1632
HindII GTYRAC 2 cut(s) 600, 1632
HindIII AAGCTT 1 cut(s) 583
HpaI GTTAAC 1 cut(s) 600
HphI GGTGA 4 cut(s) 146, 397, 1292, 2020
Hpy166II GTNNAC 4 cut(s) 600, 784, 1300, 1632
Hpy188I TCNGA 9 cut(s) 151, 393, 522, 577, 651, 833, 1159, 1264, 1837
Hpy8I GTNNAC 4 cut(s) 600, 784, 1300, 1632
Hpy99I CGWCG 8 cut(s) 119, 700, 801, 968, 1429, 1525, 1636, 1823
HpyAV CCTTC 7 cut(s) 394, 438, 527, 628, 881, 1741, 2007
HpyCH4III ACNGT 6 cut(s) 934, 1027, 1208, 1465, 1530, 1776
HpyCH4IV ACGT 6 cut(s) 452, 902, 1312, 1317, 1613, 1805
HpyF10VI GCNNNNNNNGC 4 cut(s) 611, 1072, 1196, 1880
HpyF3I CTNAG 6 cut(s) 574, 754, 1083, 1503, 1587, 1841
HpySE526I ACGT 6 cut(s) 452, 902, 1312, 1317, 1613, 1805
Hsp92I GRCGYC 4 cut(s) 20, 306, 966, 1427
HspAI GCGC 6 cut(s) 20, 818, 912, 1019, 1021, 1293
KasI GGCGCC 1 cut(s) 19
Kpn2I TCCGGA 1 cut(s) 643
KpnI GGTACC 2 cut(s) 1651, 1948
KspAI GTTAAC 1 cut(s) 600
LmnI GCTCC 3 cut(s) 152, 1126, 1837
Lsp1109I GCAGC 4 cut(s) 490, 1232, 1837, 1915
LweI GCATC 3 cut(s) 723, 1045, 1177
MaeI CTAG 7 cut(s) 45, 197, 302, 465, 570, 611, 1244
MaeII ACGT 6 cut(s) 452, 902, 1312, 1317, 1613, 1805
MaeIII GTNAC 3 cut(s) 1313, 1409, 1524
MflI RGATCY 1 cut(s) 676
MhlI GDGCHC 1 cut(s) 1805
MlsI TGGCCA 1 cut(s) 981
MluCI AATT 6 cut(s) 506, 1249, 1324, 1486, 1598, 1657
MluNI TGGCCA 1 cut(s) 981
Mly113I GGCGCC 1 cut(s) 20
MlyI GAGTC 3 cut(s) 359, 554, 1511
MmeI TCCRAC 4 cut(s) 456, 588, 1458, 1815
Mox20I TGGCCA 1 cut(s) 981
Mph1103I ATGCAT 1 cut(s) 808
MroI TCCGGA 1 cut(s) 643
MroXI GAANNNNTTC 2 cut(s) 507, 1091
MscI TGGCCA 1 cut(s) 981
MseI TTAA 4 cut(s) 599, 1044, 1143, 1575
MslI CAYNNNNRTG 1 cut(s) 743
Msp20I TGGCCA 1 cut(s) 981
MspA1I CMGCKG 1 cut(s) 1859
MspR9I CCNGG 8 cut(s) 273, 945, 1016, 1124, 1136, 1419, 1435, 1918
Mva1269I GAATGC 3 cut(s) 806, 873, 1171
MvaI CCWGG 2 cut(s) 1016, 1435
MvnI CGCG 4 cut(s) 35, 1021, 1295, 1484
MwoI GCNNNNNNNGC 4 cut(s) 611, 1072, 1196, 1880
NarI GGCGCC 1 cut(s) 20
NciI CCSGG 6 cut(s) 273, 945, 1124, 1136, 1419, 1918
NcoI CCATGG 1 cut(s) 486
NheI GCTAGC 1 cut(s) 610
NmeAIII GCCGAG 4 cut(s) 314, 685, 1191, 1216
NsiI ATGCAT 1 cut(s) 808
NspI RCATGY 2 cut(s) 1111, 1477
PagI TCATGA 1 cut(s) 1320
PauI GCGCGC 1 cut(s) 1019
PciI ACATGT 2 cut(s) 1107, 1473
PcsI WCGNNNNNNNCGW 5 cut(s) 404, 449, 972, 1056, 1802
PctI GAATGC 3 cut(s) 806, 873, 1171
PdmI GAANNNNTTC 2 cut(s) 507, 1091
PfeI GAWTC 7 cut(s) 233, 388, 523, 1355, 1591, 1867, 1913
PflFI GACNNNGTC 3 cut(s) 857, 968, 1429
PfoI TCCNGGA 3 cut(s) 943, 1122, 1916
PinAI ACCGGT 1 cut(s) 1279
PkrI GCNGC 6 cut(s) 480, 1198, 1222, 1292, 1827, 1905
PleI GAGTC 3 cut(s) 359, 554, 1511
PluTI GGCGCC 1 cut(s) 23
PmaCI CACGTG 2 cut(s) 903, 1806
PmlI CACGTG 2 cut(s) 903, 1806
PpsI GAGTC 3 cut(s) 359, 554, 1511
Ppu21I YACGTR 3 cut(s) 903, 1614, 1806
PpuMI RGGWCCY 1 cut(s) 1174
PscI ACATGT 2 cut(s) 1107, 1473
Psp5II RGGWCCY 1 cut(s) 1174
Psp6I CCWGG 2 cut(s) 1014, 1433
PspCI CACGTG 2 cut(s) 903, 1806
PspGI CCWGG 2 cut(s) 1014, 1433
PspPI GGNCC 3 cut(s) 80, 1132, 1174
PspPPI RGGWCCY 1 cut(s) 1174
PstI CTGCAG 1 cut(s) 480
PsuI RGATCY 1 cut(s) 676
PsyI GACNNNGTC 3 cut(s) 857, 968, 1429
PteI GCGCGC 1 cut(s) 1019
PvuII CAGCTG 1 cut(s) 1859
RsaI GTAC 8 cut(s) 195, 538, 1349, 1532, 1559, 1649, 1877, 1946
RsaNI GTAC 8 cut(s) 194, 537, 1348, 1531, 1558, 1648, 1876, 1945
RseI CAYNNNNRTG 1 cut(s) 743
SalI GTCGAC 1 cut(s) 1630
SaqAI TTAA 4 cut(s) 599, 1044, 1143, 1575
SatI GCNGC 6 cut(s) 479, 1197, 1221, 1291, 1826, 1904
Sau96I GGNCC 3 cut(s) 80, 1132, 1174
ScaI AGTACT 2 cut(s) 195, 538
SchI GAGTC 3 cut(s) 359, 554, 1511
ScrFI CCNGG 8 cut(s) 273, 945, 1016, 1124, 1136, 1419, 1435, 1918
SduI GDGCHC 1 cut(s) 1805
SfaNI GCATC 3 cut(s) 723, 1045, 1177
SfcI CTRYAG 1 cut(s) 476
SfoI GGCGCC 1 cut(s) 21
SgrAI CRCCGGYG 1 cut(s) 16
SinI GGWCC 2 cut(s) 1132, 1174
SmiMI CAYNNNNRTG 1 cut(s) 743
SmlI CTYRAG 1 cut(s) 1639
SmoI CTYRAG 1 cut(s) 1639
SpeI ACTAGT 1 cut(s) 464
Sse9I AATT 6 cut(s) 506, 1249, 1324, 1486, 1598, 1657
SsiI CCGC 7 cut(s) 33, 383, 446, 1075, 1196, 1290, 1295
SspDI GGCGCC 1 cut(s) 19
SspI AATATT 1 cut(s) 1101
SspMI CTAG 7 cut(s) 45, 197, 302, 465, 570, 611, 1244
StyD4I CCNGG 8 cut(s) 271, 943, 1014, 1122, 1134, 1417, 1433, 1916
StyI CCWWGG 2 cut(s) 486, 1170
TaaI ACNGT 6 cut(s) 934, 1027, 1208, 1465, 1530, 1776
TaiI ACGT 6 cut(s) 455, 905, 1315, 1320, 1616, 1808
TaqI TCGA 8 cut(s) 114, 207, 398, 407, 885, 975, 1631, 1733
TaqII GACCGA 1 cut(s) 245
TasI AATT 6 cut(s) 506, 1249, 1324, 1486, 1598, 1657
TatI WGTACW 3 cut(s) 193, 536, 1347
TauI GCSGC 2 cut(s) 1199, 1293
TfiI GAWTC 7 cut(s) 233, 388, 523, 1355, 1591, 1867, 1913
Tru1I TTAA 4 cut(s) 599, 1044, 1143, 1575
Tru9I TTAA 4 cut(s) 599, 1044, 1143, 1575
TscAI CASTG 5 cut(s) 442, 1030, 1365, 1697, 1779
TseI GCWGC 4 cut(s) 478, 1220, 1825, 1903
TspDTI ATGAA 4 cut(s) 204, 1337, 1511, 1559
TspGWI ACGGA 4 cut(s) 1284, 1649, 1737, 1943
TspRI CASTG 5 cut(s) 442, 1030, 1365, 1697, 1779
Tth111I GACNNNGTC 3 cut(s) 857, 968, 1429
VpaK11BI GGWCC 2 cut(s) 1132, 1174
XagI CCTNNNNNAGG 1 cut(s) 263
XapI RAATTY 3 cut(s) 506, 1249, 1486
XbaI TCTAGA 1 cut(s) 1243
XceI RCATGY 2 cut(s) 1111, 1477
XcmI CCANNNNNNNNNTGG 1 cut(s) 493
XmiI GTMKAC 1 cut(s) 1631
XmnI GAANNNNTTC 2 cut(s) 507, 1091
XspI CTAG 7 cut(s) 45, 197, 302, 465, 570, 611, 1244
ZrmI AGTACT 2 cut(s) 195, 538
Zsp2I ATGCAT 1 cut(s) 808
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.