Rroxscaffold_5G00371230

exocyst complex component

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0015851
Physical Location & Seq
Forward (+)
52853178 .. 52855193
2016 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00371230.1

Sequence Viewer

Length: 2016 bp
ATGGAGAAAAACGCACAGGCGCCTGAAAGGTCCGCGAGCTTCCCGAGACAACATTCCGGCAAGAAGAACATATTTTCAGGCCCCACCACACCAAAACACCGCTATGAAACAATCGACGAAGAACAGACGGAAGAGAAAGAAGGTGGCGCCGATGAAGACCCTAATGTCCCTGACATGAGCTACGATGAAGTCCTTGAAGAGGTTGATTGCTTCTACGTGCACTTGTCCGAATCAGTCGAAGAAAAAAGGGACCCGCCAAAGGTTCCCGGGTCGGTGGAGAGGCTCTGCAAAACCCTCGACTCCAAGATAAAAAAATACGGCAAAGGCTTGGCGAGGTTCGGCGAAAACGAGGCCGAAGACTCGTCGTTCACGCAGGCGGTGGTTAGGGTTTCCAAGATCTCGATCAAGTTGGGGGATATCCCTTCCAACTCGGCAACTGCAGAGACGTTGAATGGGACCAGTGCGGTTCTGCAACGTGCCATGGCCGCATTGGACGAAGAGTTCCGCAGCCTTCTGAGTCAAGAAGAGAATAATAATAATAATAACAATAAAACAGACTCTAACAATAGCTCTGAGCATAGCCGGTCTCAGAAGCTAACTGCCAAGCTGTCCTCCTTCAACAATAACAATAACGATTCGGATCGGAAGCCAACGGAAGCAGCCGAACCGGACCCATTGGAAGAGTTTCCGTCTTTTTCGCCGGAGAGCATAGTCGCCATGGAAAAAATCGCCAGCACAATGATCGCCTCCGGTTACGAGAACGAGTGCTGCATGATCTACAGCATTTCCCGGCGAATCGCATTCAAATCGGCGCTCAACGATCTCGGATACGAAAACATCAGCATTGACGATGTCCAGCGAATGCAGTGGGAGGCTCTCGAAGGAGAGATCGCCACGTGGATCACCGTCGTCAAGACGTGCTCCACCATTCTCTTCACCGGCGAGCGGAAGCTCTGCGACGCAGTCTTCGCCGGCCACCCCTCCATATCTGACAACATGTTCTGCAACATGGCGCGCGGTGTCGTCATCCAGCTCTTTAACTTCGCCGACGCAGTAGTGCTGACGAAGCGGTCGGCGGAGAAGCTGTTCAAGATATTGGACATGTATGAGTGCCTCCGCGATCTTGTCCCGGCTATTAAAAGCTCATATTCAGAGGAGGTTGCCAAGGACCTGATCTCGGAGGCCAAGGCGGCCATGAGCAGTCTCGGCGAAGCAGCCGTGAGCATTTTCTGTGATCTAGAGAATTCTATCAAGTCCGATAACGGAAGAACTCCGGTGCCAAGTGGCGCCGTTCACCCCTTGACACGTTACGTCATGAATTATGTGAAGTACGCCTGTGAGTACAAAGACTCACTGGAAGAGGTGTTTCAGCAAAACCAAGACACAAAAGGAAGCAGCGGAAATAACACCCCAGGAACGACGCCGTCCTGGTCTCCATTTCAGTTGCAGTTAATAACCGTTATGGACATGTTGGACGCCAATTTGGACATGAAGTCCAAGCTGTATAGGGATTCCGCATTACGGTACATTTTCTTGATGAACAACGGTAGGTACATCATGCAGAAGGTGAAGGGTTCTAACGAGATTCACCAATTGATGGGCGACAAGTGGTGTAGAAAGCGGTCGACGGACTTGAGAGGGTACCATAAGAATTACCAGAGGGACACATTGAGCAAGGTGTTGCAGTGCCTAAACCATGAGGGTTTGCAAGTGAACGGGAAGGTGTCGAAGCCGGTGCTGAAGGAGAGGTTCAAGAGCTTCAATGCTATGTTCGATGAGATACACAAGACGCAGAGCACGTGGGTTGTGAGCGACGAGCAGCTTCAGTCGGAGCTTAGGGTTTCGGTGTCTGCAGTAATGATTCCGGCGTACAGGTCTTTCTGGGGGAGGTTCAAGCAGTACTTGGATTCCGGGAGGCAAACGGAGAAGTATATAAGGTATCAACCGGAAGATATTGAGAATATGATTGATGACTTGTTTGATGGGAACCCTACTTCTATGGTGAGAAGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006810 GO:0006887 GO:0008150 GO:0009987 GO:0016192 GO:0032940 GO:0046903 GO:0051179 GO:0051234
KEGG Pathways
Metabolic & Signaling
ko04910 map04910
Pfam Domains
Protein Families
Exo70

Protein Analysis

671

Amino Acids

75.83

Weight (kDa)

5.37

Isoelectric Point (pI)

45.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo70_C PF03081 299 - 658 3.9e-124 Exo70 exocyst complex subunit C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015851)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G13150
fragaria_vesca FvH4_4g23180
malus_domestica MD13G1124100.v1.1 MD16G1124700.v1.1
prunus_persica Prupe.1G220900_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0429531
rosa_laevigata RLG00000007063
rosa_multiflora Rmu_sc0013305.1_g000004
rosa_roxburghii Rroxscaffold_5G00371230
rosa_rugosa Rorug04G0236900
rosa_samantha Rh4AG292700 Rh4BG298400 Rh4CG313800 Rh4DG295300
rosa_wichuraiana Rw4G025330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 164, 1069
Acc65I GGTACC 1 cut(s) 1641
AccB1I GGYRCC 5 cut(s) 19, 146, 1276, 1286, 1641
AccB7I CCANNNNNTGG 1 cut(s) 1597
AccBSI CCGCTC 1 cut(s) 946
AccI GTMKAC 1 cut(s) 1625
AccII CGCG 4 cut(s) 35, 1015, 1017, 1119
AclWI GGATC 2 cut(s) 648, 908
AcoI YGGCCR 3 cut(s) 483, 973, 1191
AcsI RAATTY 1 cut(s) 1243
AcuI CTGAAG 2 cut(s) 1760, 1808
AcvI CACGTG 2 cut(s) 897, 1800
AcyI GRCGYC 5 cut(s) 20, 147, 1287, 1421, 1476
AfaI GTAC 7 cut(s) 1331, 1343, 1526, 1553, 1643, 1871, 1901
AfiI CCNNNNNNNGG 6 cut(s) 199, 259, 945, 1177, 1521, 1597
AflIII ACRYGT 4 cut(s) 996, 1101, 1304, 1467
AgsI TTSAA 8 cut(s) 197, 451, 619, 805, 1090, 1753, 1762, 1894
AhdI GACNNNNNGTC 1 cut(s) 1492
AjiI CACGTC 1 cut(s) 918
AjnI CCWGG 2 cut(s) 1411, 1427
AloI GAACNNNNNNTCC 4 cut(s) 485, 517, 1070, 1102
Alw21I GWGCWC 3 cut(s) 222, 923, 1799
Alw26I GTCTC 5 cut(s) 40, 437, 591, 1208, 1437
Alw44I GTGCAC 1 cut(s) 218
AlwI GGATC 2 cut(s) 648, 908
Ama87I CYCGRG 2 cut(s) 43, 266
AoxI GGCC 6 cut(s) 79, 351, 483, 973, 1182, 1191
ApaLI GTGCAC 1 cut(s) 218
ApeKI GCWGC 6 cut(s) 507, 659, 768, 1214, 1395, 1819
ApoI RAATTY 1 cut(s) 1243
ArsI GACNNNNNNTTYG 2 cut(s) 950, 982
Asp700I GAANNNNTTC 2 cut(s) 684, 1085
Asp718I GGTACC 1 cut(s) 1641
AspLEI GCGC 6 cut(s) 22, 149, 814, 1015, 1017, 1289
AspS9I GGNCC 6 cut(s) 30, 80, 250, 456, 670, 1168
AsuC2I CCSGG 5 cut(s) 267, 268, 790, 1130, 1912
AsuHPI GGTGA 6 cut(s) 895, 928, 1286, 1579, 1580, 2014
AvaI CYCGRG 2 cut(s) 43, 266
AvaII GGWCC 5 cut(s) 30, 250, 456, 670, 1168
BaeGI GKGCMC 1 cut(s) 222
BanI GGYRCC 5 cut(s) 19, 146, 1276, 1286, 1641
BbrPI CACGTG 2 cut(s) 897, 1800
BbsI GAAGAC 3 cut(s) 162, 363, 958
Bbv12I GWGCWC 3 cut(s) 222, 923, 1799
BbvI GCAGC 6 cut(s) 519, 671, 755, 1226, 1407, 1831
BccI CCATC 2 cut(s) 1591, 1976
BceAI ACGGC 4 cut(s) 334, 1202, 1274, 1408
BcgI CGANNNNNNTGC 8 cut(s) 277, 311, 724, 758, 789, 823, 1717, 1751
BciT130I CCWGG 2 cut(s) 1413, 1429
BciVI GTATCC 1 cut(s) 821
BcnI CCSGG 5 cut(s) 267, 268, 790, 1130, 1912
BcoDI GTCTC 5 cut(s) 40, 437, 591, 1208, 1437
BfaI CTAG 1 cut(s) 1238
BfmI CTRYAG 3 cut(s) 438, 778, 1851
BfoI RGCGCY 4 cut(s) 23, 150, 815, 1290
BfuI GTATCC 1 cut(s) 821
BglI GCCNNNNNGGC 1 cut(s) 1190
BglII AGATCT 1 cut(s) 396
BisI GCNGC 8 cut(s) 486, 508, 660, 769, 1191, 1215, 1396, 1820
BlsI GCNGC 8 cut(s) 487, 509, 661, 770, 1192, 1216, 1397, 1821
BmcAI AGTACT 1 cut(s) 1901
Bme1390I CCNGG 7 cut(s) 267, 268, 790, 1130, 1413, 1429, 1912
Bme18I GGWCC 5 cut(s) 30, 250, 456, 670, 1168
BmeRI GACNNNNNGTC 1 cut(s) 1492
BmeT110I CYCGRG 2 cut(s) 43, 266
BmgBI CACGTC 1 cut(s) 918
BmgT120I GGNCC 6 cut(s) 30, 80, 250, 456, 670, 1168
BmrFI CCNGG 7 cut(s) 267, 268, 790, 1130, 1413, 1429, 1912
BpiI GAAGAC 3 cut(s) 162, 363, 958
Bpu10I CCTNAGC 1 cut(s) 1835
BpuEI CTTGAG 1 cut(s) 1654
BpuMI CCSGG 5 cut(s) 267, 268, 790, 1130, 1912
BsaAI YACGTR 3 cut(s) 217, 897, 1800
BsaBI GATNNNNATC 2 cut(s) 401, 639
BsaHI GRCGYC 5 cut(s) 20, 147, 1287, 1421, 1476
BsaI GGTCTC 2 cut(s) 591, 1437
BsaJI CCNNGG 6 cut(s) 266, 480, 717, 1164, 1185, 1411
BsaWI WCCGGW 4 cut(s) 667, 749, 1273, 1945
BsaXI ACNNNNNCTCC 2 cut(s) 1070, 1100
Bsc4I CCNNNNNNNGG 6 cut(s) 199, 259, 945, 1177, 1521, 1597
Bse118I RCCGGY 4 cut(s) 582, 938, 971, 1732
Bse1I ACTGG 2 cut(s) 459, 1359
Bse8I GATNNNNATC 2 cut(s) 401, 639
BseBI CCWGG 2 cut(s) 1413, 1429
BseDI CCNNGG 6 cut(s) 266, 480, 717, 1164, 1185, 1411
BseGI GGATG 1 cut(s) 1026
BseJI GATNNNNATC 2 cut(s) 401, 639
BseLI CCNNNNNNNGG 6 cut(s) 199, 259, 945, 1177, 1521, 1597
BseMII CTCAG 3 cut(s) 506, 564, 602
BseNI ACTGG 2 cut(s) 459, 1359
BsePI GCGCGC 1 cut(s) 1013
BseRI GAGGAG 1 cut(s) 1169
BseSI GKGCMC 1 cut(s) 222
BseXI GCAGC 6 cut(s) 519, 671, 755, 1226, 1407, 1831
Bsh1236I CGCG 4 cut(s) 35, 1015, 1017, 1119
Bsh1285I CGRYCG 2 cut(s) 1073, 1625
BshFI GGCC 6 cut(s) 81, 353, 485, 975, 1184, 1193
BshNI GGYRCC 5 cut(s) 19, 146, 1276, 1286, 1641
BsiEI CGRYCG 2 cut(s) 1073, 1625
BsiHKAI GWGCWC 3 cut(s) 222, 923, 1799
BsiHKCI CYCGRG 2 cut(s) 43, 266
BslFI GGGAC 5 cut(s) 152, 263, 469, 1112, 1676
BslI CCNNNNNNNGG 6 cut(s) 199, 259, 945, 1177, 1521, 1597
BsmAI GTCTC 5 cut(s) 40, 437, 591, 1208, 1437
BsmBI CGTCTC 1 cut(s) 437
BsmFI GGGAC 5 cut(s) 152, 263, 469, 1112, 1676
BsmI GAATGC 2 cut(s) 800, 867
BsnI GGCC 6 cut(s) 81, 353, 485, 975, 1184, 1193
Bso31I GGTCTC 2 cut(s) 591, 1437
BsoBI CYCGRG 2 cut(s) 43, 266
Bsp1286I GDGCHC 3 cut(s) 222, 923, 1799
Bsp19I CCATGG 2 cut(s) 480, 717
BspANI GGCC 6 cut(s) 81, 353, 485, 975, 1184, 1193
BspCNI CTCAG 3 cut(s) 507, 565, 601
BspFNI CGCG 4 cut(s) 35, 1015, 1017, 1119
BspHI TCATGA 1 cut(s) 1314
BspMAI CTGCAG 2 cut(s) 442, 1855
BspPI GGATC 2 cut(s) 648, 908
BspT107I GGYRCC 5 cut(s) 19, 146, 1276, 1286, 1641
BspTNI GGTCTC 2 cut(s) 591, 1437
BsrBI CCGCTC 1 cut(s) 946
BsrFI RCCGGY 4 cut(s) 582, 938, 971, 1732
BsrI ACTGG 2 cut(s) 459, 1359
BssAI RCCGGY 4 cut(s) 582, 938, 971, 1732
BssECI CCNNGG 6 cut(s) 266, 480, 717, 1164, 1185, 1411
BssHII GCGCGC 1 cut(s) 1013
BssNI GRCGYC 5 cut(s) 20, 147, 1287, 1421, 1476
BssT1I CCWWGG 4 cut(s) 480, 717, 1164, 1185
Bst2UI CCWGG 2 cut(s) 1413, 1429
Bst4CI ACNGT 4 cut(s) 907, 1459, 1524, 1547
Bst6I CTCTTC 7 cut(s) 126, 192, 492, 519, 675, 938, 1353
BstACI GRCGYC 5 cut(s) 20, 147, 1287, 1421, 1476
BstBAI YACGTR 3 cut(s) 217, 897, 1800
BstC8I GCNNGC 6 cut(s) 37, 375, 733, 944, 973, 1015
BstDEI CTNAG 4 cut(s) 515, 573, 588, 1835
BstDSI CCRYGG 2 cut(s) 480, 717
BstENI CCTNNNNNAGG 1 cut(s) 197
BstF5I GGATG 1 cut(s) 1026
BstFNI CGCG 4 cut(s) 35, 1015, 1017, 1119
BstH2I RGCGCY 4 cut(s) 23, 150, 815, 1290
BstHHI GCGC 6 cut(s) 22, 149, 814, 1015, 1017, 1289
BstMAI GTCTC 5 cut(s) 40, 437, 591, 1208, 1437
BstMCI CGRYCG 2 cut(s) 1073, 1625
BstMWI GCNNNNNNNGC 5 cut(s) 485, 968, 1066, 1190, 1206
BstNI CCWGG 2 cut(s) 1413, 1429
BstNSI RCATGY 3 cut(s) 1000, 1105, 1471
BstSCI CCNGG 7 cut(s) 265, 266, 788, 1128, 1411, 1427, 1910
BstSFI CTRYAG 3 cut(s) 438, 778, 1851
BstSLI GKGCMC 1 cut(s) 222
BstUI CGCG 4 cut(s) 35, 1015, 1017, 1119
BstV1I GCAGC 6 cut(s) 519, 671, 755, 1226, 1407, 1831
BstV2I GAAGAC 3 cut(s) 162, 363, 958
BstX2I RGATCY 1 cut(s) 396
BstYI RGATCY 1 cut(s) 396
BsuI GTATCC 1 cut(s) 821
BsuRI GGCC 6 cut(s) 81, 353, 485, 975, 1184, 1193
BtgI CCRYGG 2 cut(s) 480, 717
BtrI CACGTC 1 cut(s) 918
BtsCI GGATG 1 cut(s) 1026
BtsI GCAGTG 2 cut(s) 872, 1691
BtsIMutI CAGTG 4 cut(s) 466, 872, 1352, 1691
Cac8I GCNNGC 6 cut(s) 37, 375, 733, 944, 973, 1015
CciI TCATGA 1 cut(s) 1314
CfoI GCGC 6 cut(s) 22, 149, 814, 1015, 1017, 1289
Cfr10I RCCGGY 4 cut(s) 582, 938, 971, 1732
Cfr13I GGNCC 6 cut(s) 30, 80, 250, 456, 670, 1168
Cfr9I CCCGGG 1 cut(s) 266
CseI GACGC 5 cut(s) 968, 1058, 1429, 1484, 1798
Csp6I GTAC 7 cut(s) 1330, 1342, 1525, 1552, 1642, 1870, 1900
CviQI GTAC 7 cut(s) 1330, 1342, 1525, 1552, 1642, 1870, 1900
DdeI CTNAG 4 cut(s) 515, 573, 588, 1835
DinI GGCGCC 3 cut(s) 21, 148, 1288
DrdI GACNNNNNNGTC 2 cut(s) 164, 1069
DriI GACNNNNNGTC 1 cut(s) 1492
DseDI GACNNNNNNGTC 2 cut(s) 164, 1069
EaeI YGGCCR 3 cut(s) 483, 973, 1191
Eam1104I CTCTTC 7 cut(s) 126, 192, 492, 519, 675, 938, 1353
Eam1105I GACNNNNNGTC 1 cut(s) 1492
EarI CTCTTC 7 cut(s) 126, 192, 492, 519, 675, 938, 1353
EciI GGCGGA 1 cut(s) 1091
Eco130I CCWWGG 4 cut(s) 480, 717, 1164, 1185
Eco31I GGTCTC 2 cut(s) 591, 1437
Eco32I GATATC 1 cut(s) 418
Eco47I GGWCC 5 cut(s) 30, 250, 456, 670, 1168
Eco57I CTGAAG 2 cut(s) 1760, 1808
Eco72I CACGTG 2 cut(s) 897, 1800
Eco88I CYCGRG 2 cut(s) 43, 266
EcoNI CCTNNNNNAGG 1 cut(s) 197
EcoO109I RGGNCCY 3 cut(s) 80, 250, 1168
EcoRI GAATTC 1 cut(s) 1243
EcoRII CCWGG 2 cut(s) 1411, 1427
EcoRV GATATC 1 cut(s) 418
EcoT14I CCWWGG 4 cut(s) 480, 717, 1164, 1185
EgeI GGCGCC 3 cut(s) 21, 148, 1288
EheI GGCGCC 3 cut(s) 21, 148, 1288
ErhI CCWWGG 4 cut(s) 480, 717, 1164, 1185
Esp3I CGTCTC 1 cut(s) 437
FalI AAGNNNNNCTT 2 cut(s) 1886, 1918
FaqI GGGAC 5 cut(s) 152, 263, 469, 1112, 1676
FauI CCCGC 1 cut(s) 261
FblI GTMKAC 1 cut(s) 1625
Fnu4HI GCNGC 8 cut(s) 486, 508, 660, 769, 1191, 1215, 1396, 1820
FokI GGATG 1 cut(s) 1013
Fsp4HI GCNGC 8 cut(s) 486, 508, 660, 769, 1191, 1215, 1396, 1820
FspBI CTAG 1 cut(s) 1238
GlaI GCGC 6 cut(s) 21, 148, 813, 1014, 1016, 1288
GluI GCNGC 8 cut(s) 486, 508, 660, 769, 1191, 1215, 1396, 1820
HaeII RGCGCY 4 cut(s) 23, 150, 815, 1290
HaeIII GGCC 6 cut(s) 81, 353, 485, 975, 1184, 1193
HgaI GACGC 5 cut(s) 968, 1058, 1429, 1484, 1798
HhaI GCGC 6 cut(s) 22, 149, 814, 1015, 1017, 1289
Hin1I GRCGYC 5 cut(s) 20, 147, 1287, 1421, 1476
Hin6I GCGC 6 cut(s) 20, 147, 812, 1013, 1015, 1287
HinP1I GCGC 6 cut(s) 20, 147, 812, 1013, 1015, 1287
HincII GTYRAC 1 cut(s) 1626
HindII GTYRAC 1 cut(s) 1626
HphI GGTGA 6 cut(s) 895, 928, 1286, 1579, 1580, 2014
Hpy166II GTNNAC 5 cut(s) 220, 369, 1294, 1626, 1714
Hpy8I GTNNAC 5 cut(s) 220, 369, 1294, 1626, 1714
Hpy99I CGWCG 8 cut(s) 119, 367, 911, 962, 1052, 1423, 1630, 1817
HpyCH4III ACNGT 4 cut(s) 907, 1459, 1524, 1547
HpyCH4IV ACGT 8 cut(s) 216, 446, 475, 896, 917, 1306, 1311, 1799
HpyF10VI GCNNNNNNNGC 5 cut(s) 485, 968, 1066, 1190, 1206
HpyF3I CTNAG 4 cut(s) 515, 573, 588, 1835
HpySE526I ACGT 8 cut(s) 216, 446, 475, 896, 917, 1306, 1311, 1799
Hsp92I GRCGYC 5 cut(s) 20, 147, 1287, 1421, 1476
HspAI GCGC 6 cut(s) 20, 147, 812, 1013, 1015, 1287
KasI GGCGCC 3 cut(s) 19, 146, 1286
KflI GGGWCCC 1 cut(s) 250
KpnI GGTACC 1 cut(s) 1645
KroI GCCGGC 1 cut(s) 971
KroNI GCCGGC 1 cut(s) 973
LmnI GCTCC 2 cut(s) 926, 1831
Lsp1109I GCAGC 6 cut(s) 519, 671, 755, 1226, 1407, 1831
MaeI CTAG 1 cut(s) 1238
MaeII ACGT 8 cut(s) 216, 446, 475, 896, 917, 1306, 1311, 1799
MaeIII GTNAC 2 cut(s) 752, 1307
MbiI CCGCTC 1 cut(s) 946
MfeI CAATTG 1 cut(s) 1592
MflI RGATCY 1 cut(s) 396
MhlI GDGCHC 3 cut(s) 222, 923, 1799
MluCI AATT 5 cut(s) 1243, 1318, 1480, 1592, 1651
Mly113I GGCGCC 3 cut(s) 20, 147, 1287
MlyI GAGTC 5 cut(s) 293, 353, 526, 551, 1343
MmeI TCCRAC 3 cut(s) 450, 1452, 1809
MroNI GCCGGC 1 cut(s) 971
MroXI GAANNNNTTC 2 cut(s) 684, 1085
MseI TTAA 3 cut(s) 1038, 1137, 1451
MslI CAYNNNNRTG 1 cut(s) 102
MspA1I CMGCKG 1 cut(s) 1398
MspR9I CCNGG 7 cut(s) 267, 268, 790, 1130, 1413, 1429, 1912
MunI CAATTG 1 cut(s) 1592
Mva1269I GAATGC 2 cut(s) 800, 867
MvaI CCWGG 2 cut(s) 1413, 1429
MvnI CGCG 4 cut(s) 35, 1015, 1017, 1119
MwoI GCNNNNNNNGC 5 cut(s) 485, 968, 1066, 1190, 1206
NaeI GCCGGC 1 cut(s) 973
NarI GGCGCC 3 cut(s) 20, 147, 1287
NciI CCSGG 5 cut(s) 267, 268, 790, 1130, 1912
NcoI CCATGG 2 cut(s) 480, 717
NgoMIV GCCGGC 1 cut(s) 971
NmeAIII GCCGAG 2 cut(s) 410, 1185
NspI RCATGY 3 cut(s) 1000, 1105, 1471
PagI TCATGA 1 cut(s) 1314
PauI GCGCGC 1 cut(s) 1013
PciI ACATGT 3 cut(s) 996, 1101, 1467
PcsI WCGNNNNNNNCGW 2 cut(s) 345, 1796
PctI GAATGC 2 cut(s) 800, 867
PdiI GCCGGC 1 cut(s) 973
PdmI GAANNNNTTC 2 cut(s) 684, 1085
PfeI GAWTC 7 cut(s) 230, 635, 795, 1511, 1585, 1861, 1907
PflFI GACNNNGTC 3 cut(s) 851, 962, 1423
PflMI CCANNNNNTGG 1 cut(s) 1597
PfoI TCCNGGA 1 cut(s) 1910
PkrI GCNGC 8 cut(s) 487, 509, 661, 770, 1192, 1216, 1397, 1821
PleI GAGTC 5 cut(s) 293, 353, 525, 551, 1343
PluTI GGCGCC 3 cut(s) 23, 150, 1290
PmaCI CACGTG 2 cut(s) 897, 1800
PmlI CACGTG 2 cut(s) 897, 1800
PpsI GAGTC 5 cut(s) 293, 353, 525, 551, 1343
Ppu21I YACGTR 3 cut(s) 217, 897, 1800
PpuMI RGGWCCY 2 cut(s) 250, 1168
PscI ACATGT 3 cut(s) 996, 1101, 1467
Psp5II RGGWCCY 2 cut(s) 250, 1168
Psp6I CCWGG 2 cut(s) 1411, 1427
PspCI CACGTG 2 cut(s) 897, 1800
PspGI CCWGG 2 cut(s) 1411, 1427
PspPI GGNCC 6 cut(s) 30, 80, 250, 456, 670, 1168
PspPPI RGGWCCY 2 cut(s) 250, 1168
PstI CTGCAG 2 cut(s) 442, 1855
PsuI RGATCY 1 cut(s) 396
PsyI GACNNNGTC 3 cut(s) 851, 962, 1423
PteI GCGCGC 1 cut(s) 1013
RsaI GTAC 7 cut(s) 1331, 1343, 1526, 1553, 1643, 1871, 1901
RsaNI GTAC 7 cut(s) 1330, 1342, 1525, 1552, 1642, 1870, 1900
RseI CAYNNNNRTG 1 cut(s) 102
SalI GTCGAC 1 cut(s) 1624
SaqAI TTAA 3 cut(s) 1038, 1137, 1451
SatI GCNGC 8 cut(s) 486, 508, 660, 769, 1191, 1215, 1396, 1820
Sau96I GGNCC 6 cut(s) 30, 80, 250, 456, 670, 1168
ScaI AGTACT 1 cut(s) 1901
SchI GAGTC 5 cut(s) 293, 353, 526, 551, 1343
ScrFI CCNGG 7 cut(s) 267, 268, 790, 1130, 1413, 1429, 1912
SduI GDGCHC 3 cut(s) 222, 923, 1799
SfcI CTRYAG 3 cut(s) 438, 778, 1851
SfiI GGCCNNNNNGGCC 1 cut(s) 1190
SfoI GGCGCC 3 cut(s) 21, 148, 1288
SgrAI CRCCGGYG 1 cut(s) 938
SinI GGWCC 5 cut(s) 30, 250, 456, 670, 1168
SmaI CCCGGG 1 cut(s) 268
SmiMI CAYNNNNRTG 1 cut(s) 102
SmlI CTYRAG 1 cut(s) 1633
SmoI CTYRAG 1 cut(s) 1633
Sse9I AATT 5 cut(s) 1243, 1318, 1480, 1592, 1651
SspDI GGCGCC 3 cut(s) 19, 146, 1286
SspMI CTAG 1 cut(s) 1238
StyD4I CCNGG 7 cut(s) 265, 266, 788, 1128, 1411, 1427, 1910
StyI CCWWGG 4 cut(s) 480, 717, 1164, 1185
TaaI ACNGT 4 cut(s) 907, 1459, 1524, 1547
TaiI ACGT 8 cut(s) 219, 449, 478, 899, 920, 1309, 1314, 1802
TaqI TCGA 8 cut(s) 114, 237, 297, 401, 879, 1625, 1727, 1773
TasI AATT 5 cut(s) 1243, 1318, 1480, 1592, 1651
TatI WGTACW 2 cut(s) 1341, 1899
TauI GCSGC 2 cut(s) 488, 1193
TfiI GAWTC 7 cut(s) 230, 635, 795, 1511, 1585, 1861, 1907
Tru1I TTAA 3 cut(s) 1038, 1137, 1451
Tru9I TTAA 3 cut(s) 1038, 1137, 1451
TscAI CASTG 4 cut(s) 466, 872, 1359, 1691
TseI GCWGC 6 cut(s) 507, 659, 768, 1214, 1395, 1819
TspDTI ATGAA 6 cut(s) 120, 168, 201, 1331, 1505, 1553
TspGWI ACGGA 6 cut(s) 143, 668, 678, 1278, 1643, 1937
TspMI CCCGGG 1 cut(s) 266
TspRI CASTG 4 cut(s) 466, 872, 1359, 1691
Tth111I GACNNNGTC 3 cut(s) 851, 962, 1423
Van91I CCANNNNNTGG 1 cut(s) 1597
VneI GTGCAC 1 cut(s) 218
VpaK11BI GGWCC 5 cut(s) 30, 250, 456, 670, 1168
XagI CCTNNNNNAGG 1 cut(s) 197
XapI RAATTY 1 cut(s) 1243
XbaI TCTAGA 1 cut(s) 1237
XceI RCATGY 3 cut(s) 1000, 1105, 1471
XcmI CCANNNNNNNNNTGG 1 cut(s) 487
XmaI CCCGGG 1 cut(s) 266
XmiI GTMKAC 1 cut(s) 1625
XmnI GAANNNNTTC 2 cut(s) 684, 1085
XspI CTAG 1 cut(s) 1238
ZrmI AGTACT 1 cut(s) 1901
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.