FvH4_5g03050

mitogen-activated protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
1826667 .. 1831003
4337 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g03050.t1

Sequence Viewer

Length: 837 bp
ATGGCTGCCAAGGAATCAAGCTCTGCTGCTTCAGCAGGAGATTGTAAAATCAAAAGGGTGCTCACACATAATGGTAGATATGCGCAGTACAATGTGTTTGGGAACTTGTTTGAGGTCTCTAGCAAGTATGTCCCGCCAATTAGGCCAATTGGTAGAGGTGCTTATGGCATTGTTTGTGCTGCTGTGAATTCAGACACACATGAGGAAGTTGCCATTAAGAAGATCGGAAATGCTTTTGACAACATAATAGATGCCAAGAGGACGTTAAGAGAAATCAAGCTTCTTCGCCATATGAACCATGAAAATGTTATCGGCCTCAAGGACATCGTACGACCGCCCAAAAAAGACACCTTCAATGATGTATACATTGTTTATGAGTTAATGGACACTGATCTACATCAGATCATTCGTTCTGACCAACAACTAACAGATGATCATTATCAGTACTTTCTGTATCAGCTGTTAAGAGGACTAAAATATGTTCACTCTGCCAATGTGTTGCACCGGGATCTGAAGCCAAGTAATTTGCTTCTTAATGCTAATTGCGACCTTAAGATCGGAGATTTTGGACTAGCAAGAACAACATCCGAGACGGATTTCATGACCGAATATGTTGTTACTCGTTGGTACCGAGCACCTGAGTTGCTTCTTAATTGTTCAGAGTACAGTGCTGCGATTGATATATGGTCTGTTGGTTGCATACTTGGTGAAATCATAACCAGAGAACCTCTTTTTCCTGGGAAGGATTATGTTCATCAGCTGAGGCTTATCACAGAGGTTCACCCGATGATGCAAGTCTTGGATTTCTTCGAAGTGATAATACCCGCAGATATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000165 GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0000911 GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004707 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005856 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006970 GO:0006971 GO:0006972 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007112 GO:0007140 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009504 GO:0009555 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009627 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009751 GO:0009753 GO:0009755 GO:0009814 GO:0009861 GO:0009862 GO:0009863 GO:0009867 GO:0009868 GO:0009987 GO:0010033 GO:0010468 GO:0014070 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0023014 GO:0023052 GO:0030865 GO:0031122 GO:0032260 GO:0032501 GO:0032502 GO:0032504 GO:0032506 GO:0032870 GO:0033206 GO:0033993 GO:0035556 GO:0035690 GO:0035821 GO:0036211 GO:0042221 GO:0042493 GO:0042539 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043622 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0045087 GO:0046677 GO:0048229 GO:0048232 GO:0048285 GO:0048609 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051301 GO:0051321 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052031 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052306 GO:0052308 GO:0052552 GO:0052553 GO:0052564 GO:0052572 GO:0060255 GO:0061640 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0071840 GO:0075136 GO:0097305 GO:0097435 GO:0098542 GO:0140013 GO:0140096 GO:1901564 GO:1901700 GO:1901701 GO:1902410 GO:1903046 GO:1903047
KEGG Pathways
Metabolic & Signaling
ko01521 ko01522 ko01524 ko04010 ko04011 ko04012 ko04013 ko04014 ko04015 ko04016 ko04022 ko04024 ko04062 ko04066 ko04068 ko04071 ko04072 ko04114 ko04138 ko04139 ko04140 ko04150 ko04151 ko04210 ko04214 ko04218 ko04261 ko04270 ko04320 ko04350 ko04360 ko04370 ko04371 ko04380 ko04510 ko04520 ko04540 ko04550 ko04611 ko04620 ko04621 ko04650 ko04657 ko04658 ko04659 ko04660 ko04662 ko04664 ko04666 ko04668 ko04713 ko04720 ko04722 ko04723 ko04724 ko04725 ko04726 ko04730 ko04810 ko04910 ko04912 ko04914 ko04915 ko04916 ko04917 ko04919 ko04921 ko04926 ko04930 ko04933 ko04934 ko04960 ko05010 ko05020 ko05034 ko05131 ko05132 ko05133 ko05140 ko05142 ko05145 ko05152 ko05160 ko05161 ko05164 ko05165 ko05167 ko05200 ko05203 ko05205 ko05206 ko05210 ko05211 ko05212 ko05213 ko05214 ko05215 ko05216 ko05218 ko05219 ko05220 ko05221 ko05223 ko05224 ko05225 ko05226 ko05230 ko05231 ko05418 map01521 map01522 map01524 map04010 map04011 map04012 map04013 map04014 map04015 map04016 map04022 map04024 map04062 map04066 map04068 map04071 map04072 map04114 map04138 map04139 map04140 map04150 map04151 map04210 map04214 map04218 map04261 map04270 map04320 map04350 map04360 map04370 map04371 map04380 map04510 map04520 map04540 map04550 map04611 map04620 map04621 map04650 map04657 map04658 map04659 map04660 map04662 map04664 map04666 map04668 map04713 map04720 map04722 map04723 map04724 map04725 map04726 map04730 map04810 map04910 map04912 map04914 map04915 map04916 map04917 map04919 map04921 map04926 map04930 map04933 map04934 map04960 map05010 map05020 map05034 map05131 map05132 map05133 map05140 map05142 map05145 map05152 map05160 map05161 map05164 map05165 map05167 map05200 map05203 map05205 map05206 map05210 map05211 map05212 map05213 map05214 map05215 map05216 map05218 map05219 map05220 map05221 map05223 map05224 map05225 map05226 map05230 map05231 map05418
Pfam Domains
Protein Families

Protein Analysis

279

Amino Acids

31.74

Weight (kDa)

6.2

Isoelectric Point (pI)

28.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 48 - 254 1.6e-60 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 48 - 241 1.4e-32 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 84
Acc65I GGTACC 1 cut(s) 627
AccB1I GGYRCC 1 cut(s) 627
AccI GTMKAC 1 cut(s) 363
AciI CCGC 3 cut(s) 134, 335, 825
AclWI GGATC 1 cut(s) 516
AcsI RAATTY 1 cut(s) 187
AcuI CTGAAG 2 cut(s) 15, 533
AfaI GTAC 5 cut(s) 89, 330, 446, 629, 665
AflII CTTAAG 1 cut(s) 551
AgsI TTSAA 1 cut(s) 355
AjnI CCWGG 1 cut(s) 736
AluBI AGCT 4 cut(s) 21, 280, 460, 760
AluI AGCT 4 cut(s) 21, 280, 460, 760
Alw21I GWGCWC 2 cut(s) 63, 637
Alw26I GTCTC 2 cut(s) 121, 584
AlwI GGATC 1 cut(s) 516
AoxI GGCC 2 cut(s) 143, 313
ApeKI GCWGC 4 cut(s) 5, 26, 179, 671
ApoI RAATTY 1 cut(s) 187
Asp718I GGTACC 1 cut(s) 627
AspLEI GCGC 1 cut(s) 85
AsuC2I CCSGG 1 cut(s) 506
AsuHPI GGTGA 2 cut(s) 719, 773
AsuII TTCGAA 1 cut(s) 810
BanI GGYRCC 1 cut(s) 627
BarI GAAGNNNNNNTAC 2 cut(s) 804, 836
Bbv12I GWGCWC 2 cut(s) 63, 637
BbvCI CCTCAGC 1 cut(s) 761
BbvI GCAGC 3 cut(s) 13, 166, 658
BciT130I CCWGG 1 cut(s) 738
BclI TGATCA 1 cut(s) 433
BcnI CCSGG 1 cut(s) 506
BcoDI GTCTC 2 cut(s) 121, 584
BfaI CTAG 2 cut(s) 120, 572
BfrI CTTAAG 1 cut(s) 551
BglI GCCNNNNNGGC 1 cut(s) 142
BisI GCNGC 4 cut(s) 6, 27, 180, 672
BlsI GCNGC 4 cut(s) 7, 28, 181, 673
BmcAI AGTACT 1 cut(s) 446
Bme1390I CCNGG 2 cut(s) 506, 738
BmiI GGNNCC 1 cut(s) 629
BmrFI CCNGG 2 cut(s) 506, 738
BmsI GCATC 2 cut(s) 241, 780
Bpu10I CCTNAGC 1 cut(s) 761
Bpu14I TTCGAA 1 cut(s) 810
BpuEI CTTGAG 1 cut(s) 302
BpuMI CCSGG 1 cut(s) 506
BsaBI GATNNNNATC 2 cut(s) 396, 438
BsaI GGTCTC 1 cut(s) 121
BsaJI CCNNGG 2 cut(s) 9, 737
Bse8I GATNNNNATC 2 cut(s) 396, 438
BseBI CCWGG 1 cut(s) 738
BseDI CCNNGG 2 cut(s) 9, 737
BseGI GGATG 1 cut(s) 584
BseJI GATNNNNATC 2 cut(s) 396, 438
BseMII CTCAG 2 cut(s) 630, 752
BseXI GCAGC 3 cut(s) 13, 166, 658
Bsh1285I CGRYCG 1 cut(s) 335
BshFI GGCC 2 cut(s) 145, 315
BshNI GGYRCC 1 cut(s) 627
BsiEI CGRYCG 1 cut(s) 335
BsiHKAI GWGCWC 2 cut(s) 63, 637
BsiSI CCGG 1 cut(s) 505
BsiWI CGTACG 1 cut(s) 328
BslFI GGGAC 1 cut(s) 116
BsmAI GTCTC 2 cut(s) 121, 584
BsmBI CGTCTC 1 cut(s) 584
BsmFI GGGAC 1 cut(s) 116
BsnI GGCC 2 cut(s) 145, 315
Bso31I GGTCTC 1 cut(s) 121
Bsp119I TTCGAA 1 cut(s) 810
Bsp1286I GDGCHC 2 cut(s) 63, 637
Bsp143I GATC 6 cut(s) 222, 391, 402, 433, 508, 555
BspACI CCGC 3 cut(s) 134, 335, 825
BspANI GGCC 2 cut(s) 145, 315
BspCNI CTCAG 2 cut(s) 631, 753
BspHI TCATGA 1 cut(s) 600
BspLI GGNNCC 1 cut(s) 629
BspPI GGATC 1 cut(s) 516
BspT104I TTCGAA 1 cut(s) 810
BspT107I GGYRCC 1 cut(s) 627
BspTI CTTAAG 1 cut(s) 551
BspTNI GGTCTC 1 cut(s) 121
BssECI CCNNGG 2 cut(s) 9, 737
BssMI GATC 6 cut(s) 222, 391, 402, 433, 508, 555
BssNAI GTATAC 1 cut(s) 364
BssT1I CCWWGG 1 cut(s) 9
Bst1107I GTATAC 1 cut(s) 364
Bst2UI CCWGG 1 cut(s) 738
Bst4CI ACNGT 1 cut(s) 668
BstAFI CTTAAG 1 cut(s) 551
BstBI TTCGAA 1 cut(s) 810
BstDEI CTNAG 2 cut(s) 639, 761
BstF5I GGATG 1 cut(s) 584
BstHHI GCGC 1 cut(s) 85
BstKTI GATC 6 cut(s) 225, 394, 405, 436, 511, 558
BstMAI GTCTC 2 cut(s) 121, 584
BstMBI GATC 6 cut(s) 222, 391, 402, 433, 508, 555
BstMCI CGRYCG 1 cut(s) 335
BstMWI GCNNNNNNNGC 2 cut(s) 32, 142
BstNI CCWGG 1 cut(s) 738
BstSCI CCNGG 2 cut(s) 504, 736
BstV1I GCAGC 3 cut(s) 13, 166, 658
BstX2I RGATCY 1 cut(s) 508
BstYI RGATCY 1 cut(s) 508
BstZ17I GTATAC 1 cut(s) 364
BsuRI GGCC 2 cut(s) 145, 315
BtsCI GGATG 1 cut(s) 584
BtsIMutI CAGTG 2 cut(s) 387, 673
CciI TCATGA 1 cut(s) 600
CfoI GCGC 1 cut(s) 85
Csp6I GTAC 5 cut(s) 88, 329, 445, 628, 664
CviAII CATG 3 cut(s) 200, 299, 601
CviJI RGCY 9 cut(s) 5, 21, 145, 280, 315, 460, 517, 760, 766
CviKI_1 RGCY 9 cut(s) 5, 21, 145, 280, 315, 460, 517, 760, 766
CviQI GTAC 5 cut(s) 88, 329, 445, 628, 664
DdeI CTNAG 2 cut(s) 639, 761
DpnI GATC 6 cut(s) 224, 393, 404, 435, 510, 557
DpnII GATC 6 cut(s) 222, 391, 402, 433, 508, 555
Eco130I CCWWGG 1 cut(s) 9
Eco31I GGTCTC 1 cut(s) 121
Eco57I CTGAAG 2 cut(s) 15, 533
EcoRI GAATTC 1 cut(s) 187
EcoRII CCWGG 1 cut(s) 736
EcoT14I CCWWGG 1 cut(s) 9
ErhI CCWWGG 1 cut(s) 9
Esp3I CGTCTC 1 cut(s) 584
FaeI CATG 3 cut(s) 203, 302, 604
FaqI GGGAC 1 cut(s) 116
FatI CATG 3 cut(s) 199, 298, 600
FauI CCCGC 2 cut(s) 141, 832
FauNDI CATATG 1 cut(s) 291
FbaI TGATCA 1 cut(s) 433
FblI GTMKAC 1 cut(s) 363
Fnu4HI GCNGC 4 cut(s) 6, 27, 180, 672
FokI GGATG 1 cut(s) 571
Fsp4HI GCNGC 4 cut(s) 6, 27, 180, 672
FspBI CTAG 2 cut(s) 120, 572
FspI TGCGCA 1 cut(s) 84
GlaI GCGC 1 cut(s) 84
GluI GCNGC 4 cut(s) 6, 27, 180, 672
HaeIII GGCC 2 cut(s) 145, 315
HapII CCGG 1 cut(s) 505
HhaI GCGC 1 cut(s) 85
Hin1II CATG 3 cut(s) 203, 302, 604
Hin6I GCGC 1 cut(s) 83
HinP1I GCGC 1 cut(s) 83
HindIII AAGCTT 1 cut(s) 278
HinfI GANTC 1 cut(s) 14
HpaII CCGG 1 cut(s) 505
HphI GGTGA 2 cut(s) 719, 773
Hpy166II GTNNAC 3 cut(s) 364, 484, 781
Hpy188I TCNGA 8 cut(s) 193, 227, 402, 415, 513, 560, 589, 661
Hpy188III TCNNGA 1 cut(s) 601
Hpy8I GTNNAC 3 cut(s) 364, 484, 781
HpyAV CCTTC 2 cut(s) 361, 736
HpyCH4III ACNGT 1 cut(s) 668
HpyCH4IV ACGT 1 cut(s) 263
HpyCH4V TGCA 3 cut(s) 502, 699, 793
HpyF10VI GCNNNNNNNGC 2 cut(s) 32, 142
HpyF3I CTNAG 2 cut(s) 639, 761
HpySE526I ACGT 1 cut(s) 263
Hsp92II CATG 3 cut(s) 203, 302, 604
HspAI GCGC 1 cut(s) 83
KpnI GGTACC 1 cut(s) 631
Ksp22I TGATCA 1 cut(s) 433
Kzo9I GATC 6 cut(s) 222, 391, 402, 433, 508, 555
LpnPI CCDG 6 cut(s) 21, 518, 651, 723, 733, 750
Lsp1109I GCAGC 3 cut(s) 13, 166, 658
LweI GCATC 2 cut(s) 241, 780
MaeI CTAG 2 cut(s) 120, 572
MaeII ACGT 1 cut(s) 263
MaeIII GTNAC 1 cut(s) 616
MalI GATC 6 cut(s) 224, 393, 404, 435, 510, 557
MboI GATC 6 cut(s) 222, 391, 402, 433, 508, 555
MboII GAAGA 3 cut(s) 232, 275, 799
MfeI CAATTG 1 cut(s) 147
MflI RGATCY 1 cut(s) 508
MhlI GDGCHC 2 cut(s) 63, 637
MluCI AATT 6 cut(s) 138, 147, 187, 523, 541, 652
MnlI CCTC 9 cut(s) 106, 149, 196, 252, 326, 461, 738, 756, 769
MseI TTAA 7 cut(s) 216, 266, 380, 464, 534, 552, 651
MslI CAYNNNNRTG 1 cut(s) 303
MspA1I CMGCKG 2 cut(s) 460, 760
MspCI CTTAAG 1 cut(s) 551
MspI CCGG 1 cut(s) 505
MspR9I CCNGG 2 cut(s) 506, 738
MunI CAATTG 1 cut(s) 147
MvaI CCWGG 1 cut(s) 738
MwoI GCNNNNNNNGC 2 cut(s) 32, 142
NciI CCSGG 1 cut(s) 506
NdeI CATATG 1 cut(s) 291
NdeII GATC 6 cut(s) 222, 391, 402, 433, 508, 555
NlaIII CATG 3 cut(s) 203, 302, 604
NlaIV GGNNCC 1 cut(s) 629
NsbI TGCGCA 1 cut(s) 84
NspV TTCGAA 1 cut(s) 810
PagI TCATGA 1 cut(s) 600
PcsI WCGNNNNNNNCGW 1 cut(s) 628
PfeI GAWTC 1 cut(s) 14
Pfl23II CGTACG 1 cut(s) 328
PkrI GCNGC 4 cut(s) 7, 28, 181, 673
Psp6I CCWGG 1 cut(s) 736
PspGI CCWGG 1 cut(s) 736
PspLI CGTACG 1 cut(s) 328
PspN4I GGNNCC 1 cut(s) 629
PsuI RGATCY 1 cut(s) 508
PvuII CAGCTG 2 cut(s) 460, 760
RsaI GTAC 5 cut(s) 89, 330, 446, 629, 665
RsaNI GTAC 5 cut(s) 88, 329, 445, 628, 664
RseI CAYNNNNRTG 1 cut(s) 303
SaqAI TTAA 7 cut(s) 216, 266, 380, 464, 534, 552, 651
SatI GCNGC 4 cut(s) 6, 27, 180, 672
Sau3AI GATC 6 cut(s) 222, 391, 402, 433, 508, 555
ScaI AGTACT 1 cut(s) 446
ScrFI CCNGG 2 cut(s) 506, 738
SduI GDGCHC 2 cut(s) 63, 637
SfaNI GCATC 2 cut(s) 241, 780
SfuI TTCGAA 1 cut(s) 810
SmiMI CAYNNNNRTG 1 cut(s) 303
SmlI CTYRAG 2 cut(s) 317, 551
SmoI CTYRAG 2 cut(s) 317, 551
Sse9I AATT 6 cut(s) 138, 147, 187, 523, 541, 652
SsiI CCGC 3 cut(s) 134, 335, 825
SspMI CTAG 2 cut(s) 120, 572
StyD4I CCNGG 2 cut(s) 504, 736
StyI CCWWGG 1 cut(s) 9
TaaI ACNGT 1 cut(s) 668
TaiI ACGT 1 cut(s) 266
TaqI TCGA 1 cut(s) 810
TaqII GACCGA 1 cut(s) 620
TasI AATT 6 cut(s) 138, 147, 187, 523, 541, 652
TatI WGTACW 3 cut(s) 87, 444, 663
TfiI GAWTC 1 cut(s) 14
Tru1I TTAA 7 cut(s) 216, 266, 380, 464, 534, 552, 651
Tru9I TTAA 7 cut(s) 216, 266, 380, 464, 534, 552, 651
TscAI CASTG 2 cut(s) 394, 673
TseI GCWGC 4 cut(s) 5, 26, 179, 671
TspDTI ATGAA 4 cut(s) 308, 315, 589, 743
TspGWI ACGGA 1 cut(s) 608
TspRI CASTG 2 cut(s) 394, 673
Vha464I CTTAAG 1 cut(s) 551
XapI RAATTY 1 cut(s) 187
XmiI GTMKAC 1 cut(s) 363
XspI CTAG 2 cut(s) 120, 572
ZrmI AGTACT 1 cut(s) 446
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.