FvH4_5g10860

Domain of unknown function (DUF1929)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0018842
Physical Location & Seq
Reverse (-)
6138840 .. 6140483
1644 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g10860.t1

Sequence Viewer

Length: 1644 bp
ATGGTAGCAAAATTCTCTGTTTTGCTACTACTGTCACTCTGCTCGGTGCTCTTCACTGTTGGCCTTGCCGGCCAAGCCATCCACAATGGGAAATGGAAGCTGCTGAAGAAGAGCATTGGAGTCTCGGCAATGCACATGGCATTGTTACCGAACGACAAAGTCATCGTCTTCGACAGAACCGACGCCGGTCCTTCCAACCTCACTCTTCCACAAGAAAGGTGCGCTAAAGATCAAATCTGTTACGCTCACTCGGTAGAATTCAACCCAGGAAACCGGAACTTCCGGCCGCTCACTATTTCCACCGATACATGGTGCTCCTCCGGTGCATTGTCCACCAACGGCGAGCTCATTCAAACCGGCGGGTATGGTGTTGGAGAAAGAGTCGTGAGGCGCTTCAAGCCCTGCGCTAACTGCGACTGGAAAGAAGACCAGAATGGCCTCAATGTACCAAGATGGTACGCTTCCAACCAAGTCTTGCCCGACGGCAGAGTCGTCATTATTGGCGGGAGGTTTCAGTTCAATTACGAGTTCGTCCCCAAAAGCAAGATACACAGTCTTCCATTTCTTGAAGAAACAAGGTACTCGGTATATGTACCCAACAATCTCTACCCTTTTCTACACTTAGCCCCCGATGGAAATCTCTTCGTTTTCGCAAACGATAGGGCAATCTTGCTCGACTATGTGAACAACATTGTGGTGAAGAGGTTTCCGGTGCTTCCCGGTGGGGTTTCTAGAAACTACCCCAGCACCGGCTCATCTGCTCTGCTTCCGATCAGTCTTGTGGGGCAAAAGAGTAGCGGTAGTAATTTTCCGGCACAAGCTGAGGTTTTGGTCTGCGGTGGTACAGTGGCTGATGCCAACGTTAAAGCCGACGCAGGAGTGTTTGTTCCGGCAACGAAAACATGTGGCCGATTAGTAATCACGTCGGAAAATCCCAAATGGGAAGTTGAGGAAATGCCGATAAACAGAGTAATGGGGGACATGATTATGCTGCCGACAGGAGATGTGCTCATTATAAATGGCGCGGCAAAAGGAACCGCGGGTTGGGGAGTTGCTAGAGAACCCGTTCTAAGCCCGGTTCTCTACAAACCTTGGCATAAAGAATCATCCCGGTTCGAGGTCCTCACTCCCACGACAATACCTCGTCTCTATCATTCAACTGCACATCTGTTGTCCGACGGCCGTGTTCTGGTCGGCGGCAGCAACCCCAACGCGAACTATAACTTCACTTCGCTCTACCCAACTGAGCTGAGCCTCGAGACCTTCTCTCCGCCGTACTTGAGTCCTTCGTCGAGGTCGAGGCCGTTGTTAAGCTCCGTGAAGCCGGGGTCGGAGTTGGGTTATGTGCAGAAATTTTACGTGGAGTTTAGGGTGAATTACGAAGCGGAGAAGATCTACGTGACGATGGTGGCTCCGTCGTTTACTACACATTCGTTTGCTATGAACCAGAGGTTGTTGGTTTTGGATATGGGCGATGTGCGCAAGAGTAGGACTAAGAAACCTGGAGGTTCTAAATCTAACCATGACTACAGCGTTGAGAGCTTCGCACCTGCGAGGCCTGAGTTGGCGCCACCTGGTTATTATTTGTTGTTTGTGGTGTGTGATGGTGTTCCTAGTAGGGGAATGTGGGTAAGTTTGACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

548

Amino Acids

60.09

Weight (kDa)

9.02

Isoelectric Point (pI)

36.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 44 - 426 2.2e-169 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 434 - 545 8.5e-25 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018842)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g10860
prunus_persica Prupe.5G130200_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0187131
rosa_laevigata RLG00000004800
rosa_multiflora Rmu_sc0001758.1_g000035
rosa_roxburghii Rroxscaffold_3G00267680
rosa_rugosa Rorug06G0478700
rosa_samantha Rh7CG085400
rosa_wichuraiana Rw7G007430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1016
AarI CACCTGC 1 cut(s) 1558
AasI GACNNNNNNGTC 1 cut(s) 488
Acc16I TGCGCA 1 cut(s) 1481
Acc36I ACCTGC 1 cut(s) 1558
AccB1I GGYRCC 1 cut(s) 1567
AccBSI CCGCTC 1 cut(s) 289
AccII CGCG 3 cut(s) 1025, 1040, 1214
AclI AACGTT 1 cut(s) 861
AcoI YGGCCR 4 cut(s) 70, 284, 907, 1180
AcsI RAATTY 3 cut(s) 11, 257, 1352
AcuI CTGAAG 1 cut(s) 125
AcyI GRCGYC 2 cut(s) 183, 1568
AfaI GTAC 6 cut(s) 447, 458, 581, 594, 844, 1277
AfiI CCNNNNNNNGG 6 cut(s) 309, 749, 1044, 1117, 1189, 1619
AflIII ACRYGT 1 cut(s) 902
AgsI TTSAA 6 cut(s) 262, 353, 397, 520, 569, 1158
AjiI CACGTC 1 cut(s) 924
AjnI CCWGG 3 cut(s) 265, 1501, 1573
AjuI GAANNNNNNNTTGG 2 cut(s) 1027, 1059
AloI GAACNNNNNNTCC 2 cut(s) 870, 902
AluBI AGCT 6 cut(s) 100, 346, 821, 1249, 1314, 1542
AluI AGCT 6 cut(s) 100, 346, 821, 1249, 1314, 1542
Alw21I GWGCWC 4 cut(s) 51, 317, 348, 1011
Alw26I GTCTC 3 cut(s) 127, 1151, 1253
AlwNI CAGNNNCTG 1 cut(s) 851
Ama87I CYCGRG 1 cut(s) 1256
AoxI GGCC 8 cut(s) 61, 70, 284, 436, 907, 1180, 1301, 1556
ApeKI GCWGC 3 cut(s) 100, 991, 1200
ApoI RAATTY 3 cut(s) 11, 257, 1352
ArsI GACNNNNNNTTYG 2 cut(s) 150, 182
Asp700I GAANNNNTTC 1 cut(s) 1065
AspLEI GCGC 6 cut(s) 224, 393, 407, 1025, 1482, 1570
AspS9I GGNCC 2 cut(s) 188, 1120
AsuC2I CCSGG 4 cut(s) 720, 1076, 1111, 1326
AsuHPI GGTGA 2 cut(s) 709, 1384
AvaI CYCGRG 1 cut(s) 1256
AvaII GGWCC 2 cut(s) 188, 1120
BanI GGYRCC 1 cut(s) 1567
BanII GRGCYC 1 cut(s) 348
BbsI GAAGAC 3 cut(s) 160, 432, 548
Bbv12I GWGCWC 4 cut(s) 51, 317, 348, 1011
BbvCI CCTCAGC 1 cut(s) 822
BbvI GCAGC 3 cut(s) 87, 978, 1212
BccI CCATC 5 cut(s) 86, 447, 626, 1399, 1598
BceAI ACGGC 6 cut(s) 355, 499, 1167, 1195, 1258, 1288
BciT130I CCWGG 3 cut(s) 267, 1503, 1575
BcnI CCSGG 4 cut(s) 720, 1076, 1111, 1326
BcoDI GTCTC 3 cut(s) 127, 1151, 1253
BfaI CTAG 3 cut(s) 732, 1056, 1614
BfmI CTRYAG 1 cut(s) 1528
BfoI RGCGCY 2 cut(s) 394, 1571
BfuAI ACCTGC 1 cut(s) 1558
BglI GCCNNNNNGGC 1 cut(s) 69
BglII AGATCT 1 cut(s) 1392
BisI GCNGC 6 cut(s) 101, 287, 992, 1026, 1198, 1201
BlpI GCTNAGC 1 cut(s) 1250
BlsI GCNGC 6 cut(s) 102, 288, 993, 1027, 1199, 1202
Bme1390I CCNGG 7 cut(s) 267, 720, 1076, 1111, 1326, 1503, 1575
Bme18I GGWCC 2 cut(s) 188, 1120
BmeT110I CYCGRG 1 cut(s) 1256
BmgBI CACGTC 1 cut(s) 924
BmgT120I GGNCC 2 cut(s) 188, 1120
BmiI GGNNCC 3 cut(s) 1036, 1413, 1569
BmrFI CCNGG 7 cut(s) 267, 720, 1076, 1111, 1326, 1503, 1575
BmsI GCATC 1 cut(s) 844
BoxI GACNNNNGTC 1 cut(s) 186
BpiI GAAGAC 3 cut(s) 160, 432, 548
BplI GAGNNNNNCTC 4 cut(s) 993, 1025, 1250, 1282
BpmI CTGGAG 1 cut(s) 1524
Bpu10I CCTNAGC 1 cut(s) 822
Bpu1102I GCTNAGC 1 cut(s) 1250
BpuEI CTTGAG 1 cut(s) 1300
BpuMI CCSGG 4 cut(s) 720, 1076, 1111, 1326
BsaAI YACGTR 2 cut(s) 1360, 1399
BsaBI GATNNNNATC 1 cut(s) 636
BsaHI GRCGYC 2 cut(s) 183, 1568
BsaI GGTCTC 1 cut(s) 1253
BsaJI CCNNGG 4 cut(s) 265, 1038, 1091, 1325
BsaWI WCCGGW 3 cut(s) 273, 320, 709
BsaXI ACNNNNNCTCC 6 cut(s) 366, 396, 870, 900, 1252, 1282
Bsc4I CCNNNNNNNGG 6 cut(s) 309, 749, 1044, 1117, 1189, 1619
Bse118I RCCGGY 4 cut(s) 68, 185, 356, 749
Bse1I ACTGG 1 cut(s) 422
Bse3DI GCAATG 1 cut(s) 135
Bse8I GATNNNNATC 1 cut(s) 636
BseBI CCWGG 3 cut(s) 267, 1503, 1575
BseDI CCNNGG 4 cut(s) 265, 1038, 1091, 1325
BseGI GGATG 2 cut(s) 78, 1106
BseJI GATNNNNATC 1 cut(s) 636
BseLI CCNNNNNNNGG 6 cut(s) 309, 749, 1044, 1117, 1189, 1619
BseMI GCAATG 1 cut(s) 135
BseMII CTCAG 4 cut(s) 813, 1236, 1241, 1551
BseNI ACTGG 1 cut(s) 422
BseRI GAGGAG 1 cut(s) 307
BseX3I CGGCCG 2 cut(s) 284, 1180
BseXI GCAGC 3 cut(s) 87, 978, 1212
BseYI CCCAGC 1 cut(s) 743
BsgI GTGCAG 2 cut(s) 1146, 1367
Bsh1236I CGCG 3 cut(s) 1025, 1040, 1214
Bsh1285I CGRYCG 2 cut(s) 287, 1183
BshFI GGCC 8 cut(s) 63, 72, 286, 438, 909, 1182, 1303, 1558
BshNI GGYRCC 1 cut(s) 1567
BsiEI CGRYCG 2 cut(s) 287, 1183
BsiHKAI GWGCWC 4 cut(s) 51, 317, 348, 1011
BsiHKCI CYCGRG 1 cut(s) 1256
BslFI GGGAC 2 cut(s) 518, 992
BslI CCNNNNNNNGG 6 cut(s) 309, 749, 1044, 1117, 1189, 1619
BsmAI GTCTC 3 cut(s) 127, 1151, 1253
BsmBI CGTCTC 1 cut(s) 1151
BsmFI GGGAC 2 cut(s) 518, 992
BsnI GGCC 8 cut(s) 63, 72, 286, 438, 909, 1182, 1303, 1558
Bso31I GGTCTC 1 cut(s) 1253
BsoBI CYCGRG 1 cut(s) 1256
Bsp1286I GDGCHC 4 cut(s) 51, 317, 348, 1011
Bsp143I GATC 3 cut(s) 229, 771, 1392
Bsp1720I GCTNAGC 1 cut(s) 1250
BspANI GGCC 8 cut(s) 63, 72, 286, 438, 909, 1182, 1303, 1558
BspCNI CTCAG 4 cut(s) 814, 1237, 1242, 1552
BspFNI CGCG 3 cut(s) 1025, 1040, 1214
BspLI GGNNCC 3 cut(s) 1036, 1413, 1569
BspMI ACCTGC 1 cut(s) 1558
BspQI GCTCTTC 2 cut(s) 56, 104
BspT107I GGYRCC 1 cut(s) 1567
BspTNI GGTCTC 1 cut(s) 1253
BsrBI CCGCTC 1 cut(s) 289
BsrDI GCAATG 1 cut(s) 135
BsrFI RCCGGY 4 cut(s) 68, 185, 356, 749
BsrI ACTGG 1 cut(s) 422
BssAI RCCGGY 4 cut(s) 68, 185, 356, 749
BssECI CCNNGG 4 cut(s) 265, 1038, 1091, 1325
BssMI GATC 3 cut(s) 229, 771, 1392
BssNI GRCGYC 2 cut(s) 183, 1568
BssT1I CCWWGG 1 cut(s) 1091
Bst2UI CCWGG 3 cut(s) 267, 1503, 1575
Bst4CI ACNGT 4 cut(s) 33, 58, 554, 847
Bst6I CTCTTC 5 cut(s) 56, 104, 210, 647, 695
BstACI GRCGYC 2 cut(s) 183, 1568
BstBAI YACGTR 2 cut(s) 1360, 1399
BstC8I GCNNGC 2 cut(s) 70, 344
BstDEI CTNAG 7 cut(s) 622, 822, 1070, 1245, 1250, 1494, 1560
BstDSI CCRYGG 1 cut(s) 1038
BstF5I GGATG 2 cut(s) 78, 1106
BstFNI CGCG 3 cut(s) 1025, 1040, 1214
BstH2I RGCGCY 2 cut(s) 394, 1571
BstHHI GCGC 6 cut(s) 224, 393, 407, 1025, 1482, 1570
BstKTI GATC 3 cut(s) 232, 774, 1395
BstMAI GTCTC 3 cut(s) 127, 1151, 1253
BstMBI GATC 3 cut(s) 229, 771, 1392
BstMCI CGRYCG 2 cut(s) 287, 1183
BstMWI GCNNNNNNNGC 6 cut(s) 69, 74, 397, 411, 1479, 1539
BstNI CCWGG 3 cut(s) 267, 1503, 1575
BstNSI RCATGY 1 cut(s) 906
BstPAI GACNNNNGTC 1 cut(s) 186
BstSCI CCNGG 7 cut(s) 265, 718, 1074, 1109, 1324, 1501, 1573
BstSFI CTRYAG 1 cut(s) 1528
BstUI CGCG 3 cut(s) 1025, 1040, 1214
BstV1I GCAGC 3 cut(s) 87, 978, 1212
BstV2I GAAGAC 3 cut(s) 160, 432, 548
BstX2I RGATCY 1 cut(s) 1392
BstYI RGATCY 1 cut(s) 1392
BstZI CGGCCG 2 cut(s) 284, 1180
BsuRI GGCC 8 cut(s) 63, 72, 286, 438, 909, 1182, 1303, 1558
BtgI CCRYGG 1 cut(s) 1038
BtgZI GCGATG 1 cut(s) 1488
BtrI CACGTC 1 cut(s) 924
BtsCI GGATG 2 cut(s) 78, 1106
BtsIMutI CAGTG 2 cut(s) 54, 852
BveI ACCTGC 1 cut(s) 1558
Cac8I GCNNGC 2 cut(s) 70, 344
CaiI CAGNNNCTG 1 cut(s) 851
CfoI GCGC 6 cut(s) 224, 393, 407, 1025, 1482, 1570
Cfr10I RCCGGY 4 cut(s) 68, 185, 356, 749
Cfr13I GGNCC 2 cut(s) 188, 1120
Cfr42I CCGCGG 1 cut(s) 1041
CseI GACGC 2 cut(s) 191, 881
CsiI ACCWGGT 1 cut(s) 1573
Csp6I GTAC 6 cut(s) 446, 457, 580, 593, 843, 1276
CviAII CATG 6 cut(s) 136, 309, 903, 982, 1523, 1641
CviQI GTAC 6 cut(s) 446, 457, 580, 593, 843, 1276
DdeI CTNAG 7 cut(s) 622, 822, 1070, 1245, 1250, 1494, 1560
DinI GGCGCC 1 cut(s) 1569
DpnI GATC 3 cut(s) 231, 773, 1394
DpnII GATC 3 cut(s) 229, 771, 1392
DrdI GACNNNNNNGTC 1 cut(s) 488
DseDI GACNNNNNNGTC 1 cut(s) 488
EaeI YGGCCR 4 cut(s) 70, 284, 907, 1180
EagI CGGCCG 2 cut(s) 284, 1180
Eam1104I CTCTTC 5 cut(s) 56, 104, 210, 647, 695
EarI CTCTTC 5 cut(s) 56, 104, 210, 647, 695
EciI GGCGGA 1 cut(s) 1260
Ecl136II GAGCTC 1 cut(s) 346
EclXI CGGCCG 2 cut(s) 284, 1180
Eco130I CCWWGG 1 cut(s) 1091
Eco147I AGGCCT 1 cut(s) 1558
Eco24I GRGCYC 1 cut(s) 348
Eco31I GGTCTC 1 cut(s) 1253
Eco47I GGWCC 2 cut(s) 188, 1120
Eco52I CGGCCG 2 cut(s) 284, 1180
Eco53kI GAGCTC 1 cut(s) 346
Eco57I CTGAAG 1 cut(s) 125
Eco88I CYCGRG 1 cut(s) 1256
EcoICRI GAGCTC 1 cut(s) 346
EcoO109I RGGNCCY 1 cut(s) 1120
EcoRI GAATTC 1 cut(s) 257
EcoRII CCWGG 3 cut(s) 265, 1501, 1573
EcoT14I CCWWGG 1 cut(s) 1091
EcoT38I GRGCYC 1 cut(s) 348
EgeI GGCGCC 1 cut(s) 1569
EheI GGCGCC 1 cut(s) 1569
ErhI CCWWGG 1 cut(s) 1091
Esp3I CGTCTC 1 cut(s) 1151
FaeI CATG 6 cut(s) 139, 312, 906, 985, 1526, 1644
FaqI GGGAC 2 cut(s) 518, 992
FatI CATG 6 cut(s) 135, 308, 902, 981, 1522, 1640
FauI CCCGC 3 cut(s) 353, 497, 1033
Fnu4HI GCNGC 6 cut(s) 101, 287, 992, 1026, 1198, 1201
FokI GGATG 2 cut(s) 65, 1093
FriOI GRGCYC 1 cut(s) 348
Fsp4HI GCNGC 6 cut(s) 101, 287, 992, 1026, 1198, 1201
FspBI CTAG 3 cut(s) 732, 1056, 1614
FspI TGCGCA 1 cut(s) 1481
GlaI GCGC 6 cut(s) 223, 392, 406, 1024, 1481, 1569
GluI GCNGC 6 cut(s) 101, 287, 992, 1026, 1198, 1201
GsaI CCCAGC 1 cut(s) 747
GsuI CTGGAG 1 cut(s) 1524
HaeII RGCGCY 2 cut(s) 394, 1571
HaeIII GGCC 8 cut(s) 63, 72, 286, 438, 909, 1182, 1303, 1558
HgaI GACGC 2 cut(s) 191, 881
HhaI GCGC 6 cut(s) 224, 393, 407, 1025, 1482, 1570
Hin1I GRCGYC 2 cut(s) 183, 1568
Hin1II CATG 6 cut(s) 139, 312, 906, 985, 1526, 1644
Hin6I GCGC 6 cut(s) 222, 391, 405, 1023, 1480, 1568
HinP1I GCGC 6 cut(s) 222, 391, 405, 1023, 1480, 1568
HinfI GANTC 5 cut(s) 120, 381, 489, 1103, 1282
HphI GGTGA 2 cut(s) 709, 1384
Hpy166II GTNNAC 3 cut(s) 333, 685, 1422
Hpy188I TCNGA 4 cut(s) 771, 928, 1177, 1333
Hpy188III TCNNGA 4 cut(s) 385, 566, 732, 1258
Hpy8I GTNNAC 3 cut(s) 333, 685, 1422
Hpy99I CGWCG 7 cut(s) 185, 485, 875, 928, 1181, 1294, 1420
HpyAV CCTTC 3 cut(s) 201, 1273, 1296
HpyCH4III ACNGT 4 cut(s) 33, 58, 554, 847
HpyCH4IV ACGT 4 cut(s) 861, 923, 1359, 1398
HpyCH4V TGCA 4 cut(s) 133, 326, 1163, 1348
HpyF10VI GCNNNNNNNGC 6 cut(s) 69, 74, 397, 411, 1479, 1539
HpyF3I CTNAG 7 cut(s) 622, 822, 1070, 1245, 1250, 1494, 1560
HpySE526I ACGT 4 cut(s) 861, 923, 1359, 1398
Hsp92I GRCGYC 2 cut(s) 183, 1568
Hsp92II CATG 6 cut(s) 139, 312, 906, 985, 1526, 1644
HspAI GCGC 6 cut(s) 222, 391, 405, 1023, 1480, 1568
KasI GGCGCC 1 cut(s) 1567
KroI GCCGGC 1 cut(s) 68
KroNI GCCGGC 1 cut(s) 70
KspI CCGCGG 1 cut(s) 1041
Kzo9I GATC 3 cut(s) 229, 771, 1392
LguI GCTCTTC 2 cut(s) 56, 104
LmnI GCTCC 3 cut(s) 320, 1319, 1417
Lsp1109I GCAGC 3 cut(s) 87, 978, 1212
LweI GCATC 1 cut(s) 844
MabI ACCWGGT 1 cut(s) 1573
MaeI CTAG 3 cut(s) 732, 1056, 1614
MaeII ACGT 4 cut(s) 861, 923, 1359, 1398
MaeIII GTNAC 4 cut(s) 33, 144, 239, 1399
MalI GATC 3 cut(s) 231, 773, 1394
MbiI CCGCTC 1 cut(s) 289
MboI GATC 3 cut(s) 229, 771, 1392
MflI RGATCY 1 cut(s) 1392
MhlI GDGCHC 4 cut(s) 51, 317, 348, 1011
MluCI AATT 6 cut(s) 11, 257, 520, 805, 1352, 1375
Mly113I GGCGCC 1 cut(s) 1568
MlyI GAGTC 4 cut(s) 129, 390, 498, 1291
MmeI TCCRAC 6 cut(s) 219, 352, 489, 906, 1200, 1311
MroNI GCCGGC 1 cut(s) 68
MroXI GAANNNNTTC 1 cut(s) 1065
MseI TTAA 2 cut(s) 864, 1310
MslI CAYNNNNRTG 2 cut(s) 695, 986
MspA1I CMGCKG 1 cut(s) 1040
MspR9I CCNGG 7 cut(s) 267, 720, 1076, 1111, 1326, 1503, 1575
MvaI CCWGG 3 cut(s) 267, 1503, 1575
MvnI CGCG 3 cut(s) 1025, 1040, 1214
MwoI GCNNNNNNNGC 6 cut(s) 69, 74, 397, 411, 1479, 1539
NaeI GCCGGC 1 cut(s) 70
NarI GGCGCC 1 cut(s) 1568
NciI CCSGG 4 cut(s) 720, 1076, 1111, 1326
NdeII GATC 3 cut(s) 229, 771, 1392
NgoMIV GCCGGC 1 cut(s) 68
NlaIII CATG 6 cut(s) 139, 312, 906, 985, 1526, 1644
NlaIV GGNNCC 3 cut(s) 1036, 1413, 1569
NmeAIII GCCGAG 1 cut(s) 104
NmuCI GTSAC 2 cut(s) 33, 1399
NsbI TGCGCA 1 cut(s) 1481
NspI RCATGY 1 cut(s) 906
PaeR7I CTCGAG 1 cut(s) 1256
PaqCI CACCTGC 1 cut(s) 1558
PceI AGGCCT 1 cut(s) 1558
PciI ACATGT 1 cut(s) 902
PciSI GCTCTTC 2 cut(s) 56, 104
PcsI WCGNNNNNNNCGW 4 cut(s) 177, 489, 867, 1295
PdiI GCCGGC 1 cut(s) 70
PdmI GAANNNNTTC 1 cut(s) 1065
PfeI GAWTC 1 cut(s) 1103
PflFI GACNNNGTC 1 cut(s) 158
PkrI GCNGC 6 cut(s) 102, 288, 993, 1027, 1199, 1202
PleI GAGTC 4 cut(s) 128, 389, 497, 1290
PluTI GGCGCC 1 cut(s) 1571
PpsI GAGTC 4 cut(s) 128, 389, 497, 1290
Ppu21I YACGTR 2 cut(s) 1360, 1399
PpuMI RGGWCCY 1 cut(s) 1120
PscI ACATGT 1 cut(s) 902
PshAI GACNNNNGTC 1 cut(s) 186
PsiI TTATAA 1 cut(s) 1016
Psp124BI GAGCTC 1 cut(s) 348
Psp1406I AACGTT 1 cut(s) 861
Psp5II RGGWCCY 1 cut(s) 1120
Psp6I CCWGG 3 cut(s) 265, 1501, 1573
PspFI CCCAGC 1 cut(s) 743
PspGI CCWGG 3 cut(s) 265, 1501, 1573
PspN4I GGNNCC 3 cut(s) 1036, 1413, 1569
PspPI GGNCC 2 cut(s) 188, 1120
PspPPI RGGWCCY 1 cut(s) 1120
PstNI CAGNNNCTG 1 cut(s) 851
PsuI RGATCY 1 cut(s) 1392
PsyI GACNNNGTC 1 cut(s) 158
RsaI GTAC 6 cut(s) 447, 458, 581, 594, 844, 1277
RsaNI GTAC 6 cut(s) 446, 457, 580, 593, 843, 1276
RseI CAYNNNNRTG 2 cut(s) 695, 986
SacI GAGCTC 1 cut(s) 348
SacII CCGCGG 1 cut(s) 1041
SapI GCTCTTC 2 cut(s) 56, 104
SaqAI TTAA 2 cut(s) 864, 1310
SatI GCNGC 6 cut(s) 101, 287, 992, 1026, 1198, 1201
Sau3AI GATC 3 cut(s) 229, 771, 1392
Sau96I GGNCC 2 cut(s) 188, 1120
SchI GAGTC 4 cut(s) 129, 390, 498, 1291
ScrFI CCNGG 7 cut(s) 267, 720, 1076, 1111, 1326, 1503, 1575
SduI GDGCHC 4 cut(s) 51, 317, 348, 1011
SexAI ACCWGGT 1 cut(s) 1573
SfaNI GCATC 1 cut(s) 844
SfcI CTRYAG 1 cut(s) 1528
SfiI GGCCNNNNNGGCC 1 cut(s) 69
SfoI GGCGCC 1 cut(s) 1569
Sfr274I CTCGAG 1 cut(s) 1256
Sfr303I CCGCGG 1 cut(s) 1041
SgrBI CCGCGG 1 cut(s) 1041
SinI GGWCC 2 cut(s) 188, 1120
SlaI CTCGAG 1 cut(s) 1256
SmiMI CAYNNNNRTG 2 cut(s) 695, 986
SmlI CTYRAG 2 cut(s) 1256, 1279
SmoI CTYRAG 2 cut(s) 1256, 1279
Sse9I AATT 6 cut(s) 11, 257, 520, 805, 1352, 1375
SseBI AGGCCT 1 cut(s) 1558
SspDI GGCGCC 1 cut(s) 1567
SspMI CTAG 3 cut(s) 732, 1056, 1614
SstI GAGCTC 1 cut(s) 348
StuI AGGCCT 1 cut(s) 1558
StyD4I CCNGG 7 cut(s) 265, 718, 1074, 1109, 1324, 1501, 1573
StyI CCWWGG 1 cut(s) 1091
TaaI ACNGT 4 cut(s) 33, 58, 554, 847
TaiI ACGT 4 cut(s) 864, 926, 1362, 1401
TaqI TCGA 6 cut(s) 171, 675, 1116, 1257, 1292, 1298
TasI AATT 6 cut(s) 11, 257, 520, 805, 1352, 1375
TauI GCSGC 3 cut(s) 289, 1028, 1200
TfiI GAWTC 1 cut(s) 1103
Tru1I TTAA 2 cut(s) 864, 1310
Tru9I TTAA 2 cut(s) 864, 1310
TscAI CASTG 2 cut(s) 61, 852
TseFI GTSAC 2 cut(s) 33, 1399
TseI GCWGC 3 cut(s) 100, 991, 1200
Tsp45I GTSAC 2 cut(s) 33, 1399
TspDTI ATGAA 1 cut(s) 1457
TspGWI ACGGA 2 cut(s) 1306, 1404
TspRI CASTG 2 cut(s) 61, 852
Tth111I GACNNNGTC 1 cut(s) 158
VpaK11BI GGWCC 2 cut(s) 188, 1120
XapI RAATTY 3 cut(s) 11, 257, 1352
XbaI TCTAGA 1 cut(s) 731
XceI RCATGY 1 cut(s) 906
XhoI CTCGAG 1 cut(s) 1256
XmnI GAANNNNTTC 1 cut(s) 1065
XspI CTAG 3 cut(s) 732, 1056, 1614
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.