RchiOBHm_Chr7g0187131

Domain of unknown function (DUF1929)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0018842
Physical Location & Seq
Forward (+)
6913365 .. 6915453
2089 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16703

Sequence Viewer

Length: 1638 bp
ATGGAAGCAAAATCCTCTGTTTTGCTTGTACTGTCACTCTGCTCAGTGCTCTTTACTTTTGGCGGCCTTGCTAGCCAAGCCAGTCACAATGGCAAATGGAAGCTGCTGAAGAAGAGCATTGGAATCTCAGCAATGCACATGGCATTGTTACCGAACGACAAAGTCATCGTCTTCGACAGAACGGACGCCGGTCCTTCCAACCTCACTCTTCCACAAAAAAGATGCGGCAAAGATGAAATCTGTTACGCTCACTCGGTAGAATTCAACCCTGGAAACCGGAACTTCCGACCGCTCACTATCTCCACCGACACTTGGTGCTCCTCCGGTGCATTGTCCAGGAACGGCGAGCTCATTCAAACCGGCGGCTATGGTCTCGGAGAAAGAGTCGTAAGGCACTTTAAGCCCTGTGTCAATTGCGACTGGAAAGAAGACCAGAACGGCCTCAATGTACCAAGATGGTACGCTTCTAACCAAGTGTTGCCCGATGGCAGAGTCGTGATTGTTGGCGGGAGGTTTCAGTTCAATTACGAGTTCGTCCCCAAAAGCAAGATATATAGTCTGCCATTTCTTGAAGAAACAAGGTACTCGGCTTTCGTACCCAACAATCTCTACCCTTTTGTGCACTTAGCTCCCAATGGGAATCTCTTCATTTTCGCAAACGATAGGGCAATCTTGCTTGATTATGTGAACAATGTTGTTGTGAAGAGGTTTCCGGTACTTCCTGGTGGGGTTTCTAGAAACTACCCCAGCACCGGGTCATCTGCTTTGCTTCCGATTAGTCTTGTGGGGCAAAAGAGTAGTGGTACTAATTTTCCGGCGGAAGCAGAGGTTTTGGTCTGCGGTGGTACAGTGGCTGATGCCAATGTCAAAACCGACGCAGGAGTGTTTGTTCCCGCATCGAAAACCTGTGGCCGCTTAATAATCACTTCGAAACACCCCAGATGGGAAGTTGAGGAAATGCCGATAAACAGAGTAATGGGGGACATGATTATGCTGCCGACAGGAGATGTCCTCATCATAAATGGCGCGGCAAAAGGAACAGCCGGTTGGGGAGTTGCTAGAGAACCAGTCTTAAACCCGGTTCTCTACAAACCATGGAATAAAAAACCATCCCGGTTCGAGGTCCTCACTCCTACAACTATACCTCGCCTCTATCATTCAACAGCGCATCTGTTATCCGACGGTCGTGTTCTGGTCGGCGGCAGCAACCCCAACGCGAACTACAACTTCACTGCTCTCTACCCAACCGAGCTGAGTCTCGAAGCTTTCTCTCCGCCGTACTTGAATCCTTTGTCGAAGTCCAGGCCGGTGATAAGCTCCGTGAAGCCGGGGTTGGAGTTGCGTTATGTCCAGAAATTTTACGTGGGGTTTAGGTTGAATTACGAAACGGACAAGATCTATGTGACGATGGTGGCTCCGTCGTTTACTACACATTCGTTTGCTATGAACCAGAGGTTGTTGGTTTTGGACATGGGCCACGTGCGCAAGAGTAAGAAACCTGCAGGTTCTAAATATAATCATTACTACACTGTTGAGAGCTATGCACCTGCGAGGCCCGAATTGGCACCACCTGGGTACTATTTGTTGTTTGTAGTGTGTGATGGTGTACCCAGTAGAGGAATGTGGGTTCGGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

545

Amino Acids

60.24

Weight (kDa)

9.39

Isoelectric Point (pI)

33.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 45 - 427 4.6e-169 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 435 - 545 8.9e-26 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018842)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g10860
prunus_persica Prupe.5G130200_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0187131
rosa_laevigata RLG00000004800
rosa_multiflora Rmu_sc0001758.1_g000035
rosa_roxburghii Rroxscaffold_3G00267680
rosa_rugosa Rorug06G0478700
rosa_samantha Rh7CG085400
rosa_wichuraiana Rw7G007430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1555
Acc16I TGCGCA 1 cut(s) 1484
Acc36I ACCTGC 3 cut(s) 1493, 1507, 1555
AccB1I GGYRCC 1 cut(s) 1564
AccBSI CCGCTC 1 cut(s) 292
AccII CGCG 2 cut(s) 1028, 1217
AcoI YGGCCR 1 cut(s) 910
AcsI RAATTY 2 cut(s) 260, 1355
AcuI CTGAAG 1 cut(s) 128
AcvI CACGTG 1 cut(s) 1480
AcyI GRCGYC 1 cut(s) 186
AdeI CACNNNGTG 1 cut(s) 315
AfiI CCNNNNNNNGG 6 cut(s) 312, 752, 753, 943, 1120, 1616
AgsI TTSAA 7 cut(s) 265, 356, 523, 572, 1161, 1285, 1378
AjnI CCWGG 5 cut(s) 268, 335, 721, 1301, 1570
AjuI GAANNNNNNNTTGG 4 cut(s) 1030, 1062, 1316, 1348
AloI GAACNNNNNNTCC 3 cut(s) 873, 905, 1611
AluBI AGCT 7 cut(s) 103, 349, 629, 1252, 1265, 1317, 1539
AluI AGCT 7 cut(s) 103, 349, 629, 1252, 1265, 1317, 1539
Alw21I GWGCWC 4 cut(s) 51, 320, 351, 624
Alw26I GTCTC 2 cut(s) 377, 1262
Alw44I GTGCAC 1 cut(s) 620
AlwNI CAGNNNCTG 1 cut(s) 854
AoxI GGCC 6 cut(s) 64, 439, 910, 1304, 1474, 1553
ApaLI GTGCAC 1 cut(s) 620
ApeKI GCWGC 3 cut(s) 103, 994, 1203
ApoI RAATTY 2 cut(s) 260, 1355
ArsI GACNNNNNNTTYG 2 cut(s) 153, 185
Asp700I GAANNNNTTC 1 cut(s) 644
AspLEI GCGC 3 cut(s) 1028, 1168, 1485
AspS9I GGNCC 4 cut(s) 191, 1123, 1474, 1554
AsuC2I CCSGG 4 cut(s) 754, 1079, 1114, 1329
AsuHPI GGTGA 1 cut(s) 1321
AsuII TTCGAA 1 cut(s) 929
AsuNHI GCTAGC 1 cut(s) 71
AvaII GGWCC 2 cut(s) 191, 1123
BaeGI GKGCMC 1 cut(s) 624
BanI GGYRCC 1 cut(s) 1564
BanII GRGCYC 1 cut(s) 351
BbrPI CACGTG 1 cut(s) 1480
BbsI GAAGAC 2 cut(s) 163, 435
Bbv12I GWGCWC 4 cut(s) 51, 320, 351, 624
BbvI GCAGC 3 cut(s) 90, 981, 1215
BccI CCATC 6 cut(s) 450, 479, 936, 1117, 1402, 1595
BceAI ACGGC 3 cut(s) 358, 454, 1261
BciT130I CCWGG 5 cut(s) 270, 337, 723, 1303, 1572
BcnI CCSGG 4 cut(s) 754, 1079, 1114, 1329
BcoDI GTCTC 2 cut(s) 377, 1262
BfaI CTAG 4 cut(s) 72, 735, 1059, 1636
BfmI CTRYAG 1 cut(s) 1500
BfuAI ACCTGC 3 cut(s) 1493, 1507, 1555
BglII AGATCT 1 cut(s) 1395
BisI GCNGC 9 cut(s) 64, 104, 226, 364, 913, 995, 1029, 1201, 1204
BlsI GCNGC 9 cut(s) 65, 105, 227, 365, 914, 996, 1030, 1202, 1205
Bme1390I CCNGG 9 cut(s) 270, 337, 723, 754, 1079, 1114, 1303, 1329, 1572
Bme18I GGWCC 2 cut(s) 191, 1123
BmgT120I GGNCC 4 cut(s) 191, 1123, 1474, 1554
BmiI GGNNCC 2 cut(s) 1416, 1566
BmrFI CCNGG 9 cut(s) 270, 337, 723, 754, 1079, 1114, 1303, 1329, 1572
BmrI ACTGGG 1 cut(s) 1605
BmsI GCATC 4 cut(s) 212, 847, 905, 1177
BmtI GCTAGC 1 cut(s) 75
BmuI ACTGGG 1 cut(s) 1605
BoxI GACNNNNGTC 1 cut(s) 189
BpiI GAAGAC 2 cut(s) 163, 435
BplI GAGNNNNNCTC 2 cut(s) 996, 1028
Bpu14I TTCGAA 1 cut(s) 929
BpuMI CCSGG 4 cut(s) 754, 1079, 1114, 1329
BsaAI YACGTR 2 cut(s) 1363, 1480
BsaHI GRCGYC 1 cut(s) 186
BsaI GGTCTC 1 cut(s) 377
BsaJI CCNNGG 4 cut(s) 268, 1094, 1328, 1571
BsaWI WCCGGW 3 cut(s) 276, 323, 712
BsaXI ACNNNNNCTCC 4 cut(s) 369, 399, 873, 903
Bsc4I CCNNNNNNNGG 6 cut(s) 312, 752, 753, 943, 1120, 1616
Bse118I RCCGGY 4 cut(s) 188, 359, 1043, 1306
Bse1I ACTGG 4 cut(s) 81, 425, 1067, 1611
Bse3DI GCAATG 1 cut(s) 138
BseBI CCWGG 5 cut(s) 270, 337, 723, 1303, 1572
BseDI CCNNGG 4 cut(s) 268, 1094, 1328, 1571
BseGI GGATG 1 cut(s) 1109
BseLI CCNNNNNNNGG 6 cut(s) 312, 752, 753, 943, 1120, 1616
BseMI GCAATG 1 cut(s) 138
BseMII CTCAG 3 cut(s) 57, 141, 1244
BseNI ACTGG 4 cut(s) 81, 425, 1067, 1611
BseRI GAGGAG 1 cut(s) 310
BseSI GKGCMC 1 cut(s) 624
BseXI GCAGC 3 cut(s) 90, 981, 1215
BseYI CCCAGC 1 cut(s) 746
Bsh1236I CGCG 2 cut(s) 1028, 1217
Bsh1285I CGRYCG 2 cut(s) 290, 1186
BshFI GGCC 6 cut(s) 66, 441, 912, 1306, 1476, 1555
BshNI GGYRCC 1 cut(s) 1564
BsiEI CGRYCG 2 cut(s) 290, 1186
BsiHKAI GWGCWC 4 cut(s) 51, 320, 351, 624
BslFI GGGAC 2 cut(s) 521, 995
BslI CCNNNNNNNGG 6 cut(s) 312, 752, 753, 943, 1120, 1616
BsmAI GTCTC 2 cut(s) 377, 1262
BsmFI GGGAC 2 cut(s) 521, 995
BsnI GGCC 6 cut(s) 66, 441, 912, 1306, 1476, 1555
Bso31I GGTCTC 1 cut(s) 377
Bsp119I TTCGAA 1 cut(s) 929
Bsp1286I GDGCHC 4 cut(s) 51, 320, 351, 624
Bsp143I GATC 2 cut(s) 1395, 1632
Bsp19I CCATGG 1 cut(s) 1094
BspANI GGCC 6 cut(s) 66, 441, 912, 1306, 1476, 1555
BspCNI CTCAG 3 cut(s) 56, 140, 1245
BspFNI CGCG 2 cut(s) 1028, 1217
BspLI GGNNCC 2 cut(s) 1416, 1566
BspMAI CTGCAG 1 cut(s) 1504
BspMI ACCTGC 3 cut(s) 1493, 1507, 1555
BspOI GCTAGC 1 cut(s) 75
BspQI GCTCTTC 1 cut(s) 107
BspT104I TTCGAA 1 cut(s) 929
BspT107I GGYRCC 1 cut(s) 1564
BspTNI GGTCTC 1 cut(s) 377
BsrBI CCGCTC 1 cut(s) 292
BsrDI GCAATG 1 cut(s) 138
BsrFI RCCGGY 4 cut(s) 188, 359, 1043, 1306
BsrI ACTGG 4 cut(s) 81, 425, 1067, 1611
BssAI RCCGGY 4 cut(s) 188, 359, 1043, 1306
BssECI CCNNGG 4 cut(s) 268, 1094, 1328, 1571
BssMI GATC 2 cut(s) 1395, 1632
BssNI GRCGYC 1 cut(s) 186
BssT1I CCWWGG 1 cut(s) 1094
Bst2UI CCWGG 5 cut(s) 270, 337, 723, 1303, 1572
Bst4CI ACNGT 4 cut(s) 33, 850, 1184, 1531
Bst6I CTCTTC 4 cut(s) 107, 213, 650, 698
BstACI GRCGYC 1 cut(s) 186
BstBAI YACGTR 2 cut(s) 1363, 1480
BstBI TTCGAA 1 cut(s) 929
BstC8I GCNNGC 2 cut(s) 73, 347
BstDEI CTNAG 4 cut(s) 43, 127, 625, 1253
BstDSI CCRYGG 1 cut(s) 1094
BstF5I GGATG 1 cut(s) 1109
BstFNI CGCG 2 cut(s) 1028, 1217
BstHHI GCGC 3 cut(s) 1028, 1168, 1485
BstKTI GATC 2 cut(s) 1398, 1635
BstMAI GTCTC 2 cut(s) 377, 1262
BstMBI GATC 2 cut(s) 1395, 1632
BstMCI CGRYCG 2 cut(s) 290, 1186
BstMWI GCNNNNNNNGC 4 cut(s) 72, 77, 400, 1482
BstNI CCWGG 5 cut(s) 270, 337, 723, 1303, 1572
BstPAI GACNNNNGTC 1 cut(s) 189
BstSCI CCNGG 9 cut(s) 268, 335, 721, 752, 1077, 1112, 1301, 1327, 1570
BstSFI CTRYAG 1 cut(s) 1500
BstSLI GKGCMC 1 cut(s) 624
BstUI CGCG 2 cut(s) 1028, 1217
BstV1I GCAGC 3 cut(s) 90, 981, 1215
BstV2I GAAGAC 2 cut(s) 163, 435
BstX2I RGATCY 2 cut(s) 1395, 1632
BstYI RGATCY 2 cut(s) 1395, 1632
BsuRI GGCC 6 cut(s) 66, 441, 912, 1306, 1476, 1555
BtgI CCRYGG 1 cut(s) 1094
BtsCI GGATG 1 cut(s) 1109
BtsI GCAGTG 1 cut(s) 1230
BtsIMutI CAGTG 4 cut(s) 51, 855, 1230, 1527
BveI ACCTGC 3 cut(s) 1493, 1507, 1555
Cac8I GCNNGC 2 cut(s) 73, 347
CaiI CAGNNNCTG 1 cut(s) 854
CfoI GCGC 3 cut(s) 1028, 1168, 1485
Cfr10I RCCGGY 4 cut(s) 188, 359, 1043, 1306
Cfr13I GGNCC 4 cut(s) 191, 1123, 1474, 1554
CseI GACGC 2 cut(s) 194, 884
CviAII CATG 4 cut(s) 139, 985, 1095, 1471
DdeI CTNAG 4 cut(s) 43, 127, 625, 1253
DpnI GATC 2 cut(s) 1397, 1634
DpnII GATC 2 cut(s) 1395, 1632
DraIII CACNNNGTG 1 cut(s) 315
EaeI YGGCCR 1 cut(s) 910
Eam1104I CTCTTC 4 cut(s) 107, 213, 650, 698
EarI CTCTTC 4 cut(s) 107, 213, 650, 698
EciI GGCGGA 2 cut(s) 833, 1263
Ecl136II GAGCTC 1 cut(s) 349
Eco130I CCWWGG 1 cut(s) 1094
Eco24I GRGCYC 1 cut(s) 351
Eco31I GGTCTC 1 cut(s) 377
Eco47I GGWCC 2 cut(s) 191, 1123
Eco53kI GAGCTC 1 cut(s) 349
Eco57I CTGAAG 1 cut(s) 128
Eco72I CACGTG 1 cut(s) 1480
EcoICRI GAGCTC 1 cut(s) 349
EcoO109I RGGNCCY 1 cut(s) 1123
EcoRI GAATTC 1 cut(s) 260
EcoRII CCWGG 5 cut(s) 268, 335, 721, 1301, 1570
EcoT14I CCWWGG 1 cut(s) 1094
EcoT38I GRGCYC 1 cut(s) 351
ErhI CCWWGG 1 cut(s) 1094
FaeI CATG 4 cut(s) 142, 988, 1098, 1474
FaqI GGGAC 2 cut(s) 521, 995
FatI CATG 4 cut(s) 138, 984, 1094, 1470
FauI CCCGC 2 cut(s) 500, 901
Fnu4HI GCNGC 9 cut(s) 64, 104, 226, 364, 913, 995, 1029, 1201, 1204
FokI GGATG 1 cut(s) 1096
FriOI GRGCYC 1 cut(s) 351
Fsp4HI GCNGC 9 cut(s) 64, 104, 226, 364, 913, 995, 1029, 1201, 1204
FspBI CTAG 4 cut(s) 72, 735, 1059, 1636
FspI TGCGCA 1 cut(s) 1484
GlaI GCGC 3 cut(s) 1027, 1167, 1484
GluI GCNGC 9 cut(s) 64, 104, 226, 364, 913, 995, 1029, 1201, 1204
GsaI CCCAGC 1 cut(s) 750
HaeIII GGCC 6 cut(s) 66, 441, 912, 1306, 1476, 1555
HgaI GACGC 2 cut(s) 194, 884
HhaI GCGC 3 cut(s) 1028, 1168, 1485
Hin1I GRCGYC 1 cut(s) 186
Hin1II CATG 4 cut(s) 142, 988, 1098, 1474
Hin6I GCGC 3 cut(s) 1026, 1166, 1483
HinP1I GCGC 3 cut(s) 1026, 1166, 1483
HindIII AAGCTT 1 cut(s) 1263
HinfI GANTC 6 cut(s) 123, 384, 492, 640, 1255, 1285
HphI GGTGA 1 cut(s) 1321
Hpy166II GTNNAC 4 cut(s) 622, 688, 1425, 1607
Hpy188I TCNGA 5 cut(s) 287, 377, 774, 1180, 1632
Hpy188III TCNNGA 5 cut(s) 496, 569, 735, 1259, 1351
Hpy8I GTNNAC 4 cut(s) 622, 688, 1425, 1607
Hpy99I CGWCG 3 cut(s) 878, 1184, 1423
HpyAV CCTTC 1 cut(s) 204
HpyCH4III ACNGT 4 cut(s) 33, 850, 1184, 1531
HpyCH4IV ACGT 2 cut(s) 1362, 1479
HpyCH4V TGCA 5 cut(s) 136, 329, 622, 1502, 1544
HpyF10VI GCNNNNNNNGC 4 cut(s) 72, 77, 400, 1482
HpyF3I CTNAG 4 cut(s) 43, 127, 625, 1253
HpySE526I ACGT 2 cut(s) 1362, 1479
Hsp92I GRCGYC 1 cut(s) 186
Hsp92II CATG 4 cut(s) 142, 988, 1098, 1474
HspAI GCGC 3 cut(s) 1026, 1166, 1483
Kzo9I GATC 2 cut(s) 1395, 1632
LguI GCTCTTC 1 cut(s) 107
LmnI GCTCC 4 cut(s) 323, 634, 1322, 1420
Lsp1109I GCAGC 3 cut(s) 90, 981, 1215
LweI GCATC 4 cut(s) 212, 847, 905, 1177
MaeI CTAG 4 cut(s) 72, 735, 1059, 1636
MaeII ACGT 2 cut(s) 1362, 1479
MaeIII GTNAC 5 cut(s) 33, 83, 147, 242, 1402
MalI GATC 2 cut(s) 1397, 1634
MbiI CCGCTC 1 cut(s) 292
MboI GATC 2 cut(s) 1395, 1632
MboII GAAGA 8 cut(s) 121, 124, 163, 200, 440, 584, 637, 715
MfeI CAATTG 1 cut(s) 412
MflI RGATCY 2 cut(s) 1395, 1632
MhlI GDGCHC 4 cut(s) 51, 320, 351, 624
MluCI AATT 7 cut(s) 260, 412, 523, 808, 1355, 1378, 1559
MlyI GAGTC 3 cut(s) 393, 501, 1264
MmeI TCCRAC 4 cut(s) 222, 310, 1203, 1314
MroXI GAANNNNTTC 1 cut(s) 644
MseI TTAA 3 cut(s) 399, 917, 1073
MslI CAYNNNNRTG 1 cut(s) 989
MspR9I CCNGG 9 cut(s) 270, 337, 723, 754, 1079, 1114, 1303, 1329, 1572
MunI CAATTG 1 cut(s) 412
MvaI CCWGG 5 cut(s) 270, 337, 723, 1303, 1572
MvnI CGCG 2 cut(s) 1028, 1217
MwoI GCNNNNNNNGC 4 cut(s) 72, 77, 400, 1482
NciI CCSGG 4 cut(s) 754, 1079, 1114, 1329
NcoI CCATGG 1 cut(s) 1094
NdeII GATC 2 cut(s) 1395, 1632
NheI GCTAGC 1 cut(s) 71
NlaIII CATG 4 cut(s) 142, 988, 1098, 1474
NlaIV GGNNCC 2 cut(s) 1416, 1566
NmeAIII GCCGAG 1 cut(s) 566
NmuCI GTSAC 3 cut(s) 33, 83, 1402
NsbI TGCGCA 1 cut(s) 1484
NspV TTCGAA 1 cut(s) 929
PaqCI CACCTGC 1 cut(s) 1555
PciSI GCTCTTC 1 cut(s) 107
PdmI GAANNNNTTC 1 cut(s) 644
PfeI GAWTC 3 cut(s) 123, 640, 1285
PflFI GACNNNGTC 1 cut(s) 161
PfoI TCCNGGA 1 cut(s) 335
PkrI GCNGC 9 cut(s) 65, 105, 227, 365, 914, 996, 1030, 1202, 1205
PleI GAGTC 3 cut(s) 392, 500, 1263
PmaCI CACGTG 1 cut(s) 1480
PmlI CACGTG 1 cut(s) 1480
PpsI GAGTC 3 cut(s) 392, 500, 1263
Ppu21I YACGTR 2 cut(s) 1363, 1480
PpuMI RGGWCCY 1 cut(s) 1123
PshAI GACNNNNGTC 1 cut(s) 189
Psp124BI GAGCTC 1 cut(s) 351
Psp5II RGGWCCY 1 cut(s) 1123
Psp6I CCWGG 5 cut(s) 268, 335, 721, 1301, 1570
PspCI CACGTG 1 cut(s) 1480
PspFI CCCAGC 1 cut(s) 746
PspGI CCWGG 5 cut(s) 268, 335, 721, 1301, 1570
PspN4I GGNNCC 2 cut(s) 1416, 1566
PspPI GGNCC 4 cut(s) 191, 1123, 1474, 1554
PspPPI RGGWCCY 1 cut(s) 1123
PstI CTGCAG 1 cut(s) 1504
PstNI CAGNNNCTG 1 cut(s) 854
PsuI RGATCY 2 cut(s) 1395, 1632
PsyI GACNNNGTC 1 cut(s) 161
RseI CAYNNNNRTG 1 cut(s) 989
SacI GAGCTC 1 cut(s) 351
SapI GCTCTTC 1 cut(s) 107
SaqAI TTAA 3 cut(s) 399, 917, 1073
SatI GCNGC 9 cut(s) 64, 104, 226, 364, 913, 995, 1029, 1201, 1204
Sau3AI GATC 2 cut(s) 1395, 1632
Sau96I GGNCC 4 cut(s) 191, 1123, 1474, 1554
SbfI CCTGCAGG 1 cut(s) 1504
SchI GAGTC 3 cut(s) 393, 501, 1264
ScrFI CCNGG 9 cut(s) 270, 337, 723, 754, 1079, 1114, 1303, 1329, 1572
SdaI CCTGCAGG 1 cut(s) 1504
SduI GDGCHC 4 cut(s) 51, 320, 351, 624
SfaNI GCATC 4 cut(s) 212, 847, 905, 1177
SfcI CTRYAG 1 cut(s) 1500
SfuI TTCGAA 1 cut(s) 929
SinI GGWCC 2 cut(s) 191, 1123
SmiMI CAYNNNNRTG 1 cut(s) 989
Sse8387I CCTGCAGG 1 cut(s) 1504
Sse9I AATT 7 cut(s) 260, 412, 523, 808, 1355, 1378, 1559
SspMI CTAG 4 cut(s) 72, 735, 1059, 1636
SstI GAGCTC 1 cut(s) 351
StyD4I CCNGG 9 cut(s) 268, 335, 721, 752, 1077, 1112, 1301, 1327, 1570
StyI CCWWGG 1 cut(s) 1094
TaaI ACNGT 4 cut(s) 33, 850, 1184, 1531
TaiI ACGT 2 cut(s) 1365, 1482
TaqI TCGA 6 cut(s) 174, 899, 929, 1119, 1260, 1295
TasI AATT 7 cut(s) 260, 412, 523, 808, 1355, 1378, 1559
TatI WGTACW 1 cut(s) 28
TauI GCSGC 6 cut(s) 66, 228, 366, 915, 1031, 1203
TfiI GAWTC 3 cut(s) 123, 640, 1285
Tru1I TTAA 3 cut(s) 399, 917, 1073
Tru9I TTAA 3 cut(s) 399, 917, 1073
TscAI CASTG 4 cut(s) 51, 855, 1237, 1534
TseFI GTSAC 3 cut(s) 33, 83, 1402
TseI GCWGC 3 cut(s) 103, 994, 1203
Tsp45I GTSAC 3 cut(s) 33, 83, 1402
TspDTI ATGAA 3 cut(s) 249, 637, 1460
TspGWI ACGGA 4 cut(s) 197, 1309, 1403, 1407
TspRI CASTG 4 cut(s) 51, 855, 1237, 1534
Tth111I GACNNNGTC 1 cut(s) 161
VneI GTGCAC 1 cut(s) 620
VpaK11BI GGWCC 2 cut(s) 191, 1123
XapI RAATTY 2 cut(s) 260, 1355
XbaI TCTAGA 1 cut(s) 734
XmnI GAANNNNTTC 1 cut(s) 644
XspI CTAG 4 cut(s) 72, 735, 1059, 1636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.