B3 domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g12131 |
| rosa_laevigata | RLG00000004913 |
| rosa_multiflora | Rmu_sc0001761.1_g000001 Rmu_sc0030883.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00268940 |
| rosa_rugosa | Rorug06G0469000 |
| rosa_samantha | Rh7AG073700 Rh7BG074000 Rh7CG074200 Rh7DG074100 |
| rosa_wichuraiana | Rw7G006160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 270 |
| AciI | CCGC | 2 cut(s) | 174, 393 |
| AcsI | RAATTY | 1 cut(s) | 541 |
| AfaI | GTAC | 2 cut(s) | 287, 470 |
| AgsI | TTSAA | 2 cut(s) | 475, 547 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 32 |
| AluBI | AGCT | 4 cut(s) | 61, 265, 351, 448 |
| AluI | AGCT | 4 cut(s) | 61, 265, 351, 448 |
| ApeKI | GCWGC | 2 cut(s) | 334, 577 |
| ApoI | RAATTY | 1 cut(s) | 541 |
| AseI | ATTAAT | 1 cut(s) | 23 |
| AspLEI | GCGC | 1 cut(s) | 392 |
| AsuC2I | CCSGG | 1 cut(s) | 326 |
| AsuHPI | GGTGA | 3 cut(s) | 230, 352, 566 |
| BanI | GGYRCC | 1 cut(s) | 270 |
| BbsI | GAAGAC | 1 cut(s) | 493 |
| BbvCI | CCTCAGC | 1 cut(s) | 266 |
| BbvI | GCAGC | 2 cut(s) | 321, 589 |
| BccI | CCATC | 2 cut(s) | 74, 209 |
| BclI | TGATCA | 1 cut(s) | 361 |
| BcnI | CCSGG | 1 cut(s) | 326 |
| BfaI | CTAG | 2 cut(s) | 183, 449 |
| BfoI | RGCGCY | 1 cut(s) | 393 |
| BisI | GCNGC | 3 cut(s) | 335, 393, 578 |
| BlsI | GCNGC | 3 cut(s) | 336, 394, 579 |
| Bme1390I | CCNGG | 1 cut(s) | 326 |
| BmiI | GGNNCC | 1 cut(s) | 272 |
| BmrFI | CCNGG | 1 cut(s) | 326 |
| BmsI | GCATC | 1 cut(s) | 223 |
| BpiI | GAAGAC | 1 cut(s) | 493 |
| Bpu10I | CCTNAGC | 1 cut(s) | 266 |
| BpuMI | CCSGG | 1 cut(s) | 326 |
| BsaJI | CCNNGG | 2 cut(s) | 143, 177 |
| Bse118I | RCCGGY | 1 cut(s) | 337 |
| Bse1I | ACTGG | 1 cut(s) | 216 |
| Bse3DI | GCAATG | 1 cut(s) | 126 |
| BseDI | CCNNGG | 2 cut(s) | 143, 177 |
| BseGI | GGATG | 2 cut(s) | 220, 316 |
| BseMI | GCAATG | 1 cut(s) | 126 |
| BseMII | CTCAG | 1 cut(s) | 257 |
| BseNI | ACTGG | 1 cut(s) | 216 |
| BseXI | GCAGC | 2 cut(s) | 321, 589 |
| BseYI | CCCAGC | 1 cut(s) | 351 |
| Bsh1285I | CGRYCG | 1 cut(s) | 201 |
| BshNI | GGYRCC | 1 cut(s) | 270 |
| BsiEI | CGRYCG | 1 cut(s) | 201 |
| BsiSI | CCGG | 2 cut(s) | 325, 338 |
| Bsp143I | GATC | 2 cut(s) | 166, 361 |
| Bsp19I | CCATGG | 1 cut(s) | 143 |
| BspACI | CCGC | 2 cut(s) | 174, 393 |
| BspCNI | CTCAG | 1 cut(s) | 258 |
| BspLI | GGNNCC | 1 cut(s) | 272 |
| BspT107I | GGYRCC | 1 cut(s) | 270 |
| BsrDI | GCAATG | 1 cut(s) | 126 |
| BsrFI | RCCGGY | 1 cut(s) | 337 |
| BsrI | ACTGG | 1 cut(s) | 216 |
| BssAI | RCCGGY | 1 cut(s) | 337 |
| BssECI | CCNNGG | 2 cut(s) | 143, 177 |
| BssMI | GATC | 2 cut(s) | 166, 361 |
| BssT1I | CCWWGG | 2 cut(s) | 143, 177 |
| Bst4CI | ACNGT | 2 cut(s) | 275, 443 |
| BstDEI | CTNAG | 1 cut(s) | 266 |
| BstDSI | CCRYGG | 1 cut(s) | 143 |
| BstF5I | GGATG | 2 cut(s) | 220, 316 |
| BstH2I | RGCGCY | 1 cut(s) | 393 |
| BstHHI | GCGC | 1 cut(s) | 392 |
| BstKTI | GATC | 2 cut(s) | 169, 364 |
| BstMBI | GATC | 2 cut(s) | 166, 361 |
| BstMCI | CGRYCG | 1 cut(s) | 201 |
| BstSCI | CCNGG | 1 cut(s) | 324 |
| BstV1I | GCAGC | 2 cut(s) | 321, 589 |
| BstV2I | GAAGAC | 1 cut(s) | 493 |
| BtgI | CCRYGG | 1 cut(s) | 143 |
| BtsCI | GGATG | 2 cut(s) | 220, 316 |
| CfoI | GCGC | 1 cut(s) | 392 |
| Cfr10I | RCCGGY | 1 cut(s) | 337 |
| CseI | GACGC | 1 cut(s) | 287 |
| Csp6I | GTAC | 2 cut(s) | 286, 469 |
| CviAII | CATG | 4 cut(s) | 144, 242, 461, 592 |
| CviJI | RGCY | 8 cut(s) | 61, 125, 182, 265, 298, 324, 351, 448 |
| CviKI_1 | RGCY | 8 cut(s) | 61, 125, 182, 265, 298, 324, 351, 448 |
| CviQI | GTAC | 2 cut(s) | 286, 469 |
| DdeI | CTNAG | 1 cut(s) | 266 |
| DpnI | GATC | 2 cut(s) | 168, 363 |
| DpnII | GATC | 2 cut(s) | 166, 361 |
| Eco130I | CCWWGG | 2 cut(s) | 143, 177 |
| EcoT14I | CCWWGG | 2 cut(s) | 143, 177 |
| ErhI | CCWWGG | 2 cut(s) | 143, 177 |
| FaeI | CATG | 4 cut(s) | 147, 245, 464, 595 |
| FaiI | YATR | 8 cut(s) | 28, 50, 145, 243, 248, 332, 462, 593 |
| FatI | CATG | 4 cut(s) | 143, 241, 460, 591 |
| FbaI | TGATCA | 1 cut(s) | 361 |
| Fnu4HI | GCNGC | 3 cut(s) | 335, 393, 578 |
| FokI | GGATG | 2 cut(s) | 227, 323 |
| Fsp4HI | GCNGC | 3 cut(s) | 335, 393, 578 |
| FspBI | CTAG | 2 cut(s) | 183, 449 |
| GlaI | GCGC | 1 cut(s) | 391 |
| GluI | GCNGC | 3 cut(s) | 335, 393, 578 |
| GsaI | CCCAGC | 1 cut(s) | 355 |
| HaeII | RGCGCY | 1 cut(s) | 393 |
| HapII | CCGG | 2 cut(s) | 325, 338 |
| HgaI | GACGC | 1 cut(s) | 287 |
| HhaI | GCGC | 1 cut(s) | 392 |
| Hin1II | CATG | 4 cut(s) | 147, 245, 464, 595 |
| Hin6I | GCGC | 1 cut(s) | 390 |
| HinP1I | GCGC | 1 cut(s) | 390 |
| HinfI | GANTC | 4 cut(s) | 55, 402, 532, 587 |
| HpaII | CCGG | 2 cut(s) | 325, 338 |
| HphI | GGTGA | 3 cut(s) | 230, 352, 566 |
| Hpy166II | GTNNAC | 2 cut(s) | 73, 413 |
| Hpy188I | TCNGA | 3 cut(s) | 7, 537, 618 |
| Hpy188III | TCNNGA | 1 cut(s) | 104 |
| Hpy8I | GTNNAC | 2 cut(s) | 73, 413 |
| Hpy99I | CGWCG | 1 cut(s) | 308 |
| HpyAV | CCTTC | 2 cut(s) | 430, 541 |
| HpyCH4III | ACNGT | 2 cut(s) | 275, 443 |
| HpyCH4V | TGCA | 2 cut(s) | 119, 236 |
| HpyF3I | CTNAG | 1 cut(s) | 266 |
| Hsp92II | CATG | 4 cut(s) | 147, 245, 464, 595 |
| HspAI | GCGC | 1 cut(s) | 390 |
| Ksp22I | TGATCA | 1 cut(s) | 361 |
| Kzo9I | GATC | 2 cut(s) | 166, 361 |
| LpnPI | CCDG | 6 cut(s) | 102, 197, 337, 338, 350, 351 |
| Lsp1109I | GCAGC | 2 cut(s) | 321, 589 |
| LweI | GCATC | 1 cut(s) | 223 |
| MaeI | CTAG | 2 cut(s) | 183, 449 |
| MaeIII | GTNAC | 1 cut(s) | 275 |
| MalI | GATC | 2 cut(s) | 168, 363 |
| MboI | GATC | 2 cut(s) | 166, 361 |
| MboII | GAAGA | 6 cut(s) | 29, 148, 204, 215, 487, 493 |
| MluCI | AATT | 2 cut(s) | 8, 541 |
| MnlI | CCTC | 5 cut(s) | 261, 486, 504, 544, 577 |
| MseI | TTAA | 1 cut(s) | 23 |
| MslI | CAYNNNNRTG | 1 cut(s) | 142 |
| MspI | CCGG | 2 cut(s) | 325, 338 |
| MspR9I | CCNGG | 1 cut(s) | 326 |
| NciI | CCSGG | 1 cut(s) | 326 |
| NcoI | CCATGG | 1 cut(s) | 143 |
| NdeII | GATC | 2 cut(s) | 166, 361 |
| NlaIII | CATG | 4 cut(s) | 147, 245, 464, 595 |
| NlaIV | GGNNCC | 1 cut(s) | 272 |
| NmeAIII | GCCGAG | 1 cut(s) | 421 |
| NmuCI | GTSAC | 1 cut(s) | 275 |
| PfeI | GAWTC | 4 cut(s) | 55, 402, 532, 587 |
| PkrI | GCNGC | 3 cut(s) | 336, 394, 579 |
| PshBI | ATTAAT | 1 cut(s) | 23 |
| PspFI | CCCAGC | 1 cut(s) | 351 |
| PspN4I | GGNNCC | 1 cut(s) | 272 |
| RsaI | GTAC | 2 cut(s) | 287, 470 |
| RsaNI | GTAC | 2 cut(s) | 286, 469 |
| RseI | CAYNNNNRTG | 1 cut(s) | 142 |
| SaqAI | TTAA | 1 cut(s) | 23 |
| SatI | GCNGC | 3 cut(s) | 335, 393, 578 |
| Sau3AI | GATC | 2 cut(s) | 166, 361 |
| ScrFI | CCNGG | 1 cut(s) | 326 |
| SetI | ASST | 7 cut(s) | 63, 267, 353, 369, 450, 497, 515 |
| SfaNI | GCATC | 1 cut(s) | 223 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 142 |
| Sse9I | AATT | 2 cut(s) | 8, 541 |
| SsiI | CCGC | 2 cut(s) | 174, 393 |
| SspI | AATATT | 1 cut(s) | 562 |
| SspMI | CTAG | 2 cut(s) | 183, 449 |
| StyD4I | CCNGG | 1 cut(s) | 324 |
| StyI | CCWWGG | 2 cut(s) | 143, 177 |
| TaaI | ACNGT | 2 cut(s) | 275, 443 |
| TaqI | TCGA | 2 cut(s) | 105, 159 |
| TaqII | GACCGA | 1 cut(s) | 215 |
| TasI | AATT | 2 cut(s) | 8, 541 |
| TatI | WGTACW | 1 cut(s) | 468 |
| TauI | GCSGC | 1 cut(s) | 395 |
| TfiI | GAWTC | 4 cut(s) | 55, 402, 532, 587 |
| Tru1I | TTAA | 1 cut(s) | 23 |
| Tru9I | TTAA | 1 cut(s) | 23 |
| TseFI | GTSAC | 1 cut(s) | 275 |
| TseI | GCWGC | 2 cut(s) | 334, 577 |
| Tsp45I | GTSAC | 1 cut(s) | 275 |
| TspDTI | ATGAA | 3 cut(s) | 68, 222, 263 |
| VspI | ATTAAT | 1 cut(s) | 23 |
| XapI | RAATTY | 1 cut(s) | 541 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 141 |
| XspI | CTAG | 2 cut(s) | 183, 449 |