FvH4_6g38790

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0024188
Physical Location & Seq
Reverse (-)
30692473 .. 30699000
6528 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g38790.t1

Sequence Viewer

Length: 2871 bp
ATGAGCAACCGCCTGAGAAGTGCGATTTCGGCTACATTGCTACATGGAGGTGCTCCGGCTCCGCCGGCGGCAGAGCGGAGGGAACTGAAGGATGCGATGACCAAGTCTATTCCTTCTTTCCAGTCCCTGTTGGATTACGAGCCTCCGTCGGACTCCGGTGATCGTGCTGAGCTAGAGGGAATTGAAATTCCCGACGGATTTGATGAGGATTTGGCGTTGGAGATGAGTCATCGACTGCATCTCAACGTGAGTGATTGTATGCGATTTATTCGGTCTGCATATCAAGAGTGGGCTTCCATCGGTGGAAGTCCTCAAGACATTATCAAGCATGCCGAACGATTGTGGTTCAAGGAGAGGAGGGACCTGCTCGAAAATTTGTATACTATTTTGAGGATTCAAGTGCTTGGTCCTGTAGAACCTGAGATTCGATCTGATATCGCCAACTTTCTGGAAAGCATTTTGCGTAGCGGGCTGAGACAGAGGATTCTGTCTCTACTCAAGGATGTTAATAGAGAAGAACCAGCTGAGCTGGTTGGGCCTCATTCTGAGCCCCGTGTTCTTGATTCTAGTGGAATTCTTGTCCAGCAGGAAGATGTACTGTCCTTGGAGAAGCTCATACTTGGGCATTGCCTTTGCCTTTCTACATTGGTTGTTGACTCACCTCAAGCTGATATTAAGGAAATTTTGCTTTCCTTAATAGATTGCGTATCTTATCTTCACCACACAACACGACAGCAGGTTGCGTTTAGTCTTCTTTTCTCTATTGTGATCCCATTTGTAGCAGATTCTCCGAGTCCATCTACACTGGAAGATTCCTTCAAAAATGAATTTCTTGAAACTGTAATGGCCACAGGACGTGATCAAAATGTTGAGGGTTTTCTTGGCTGCATAAGATTAGCTTGGGCAGCACACATGATAGTCACACAAGATTTGGATCACCTAGATTCGTGTTTGGAGCTAGTTTTTATGAACAATGTATTCCAGTTTATATCAGATGAGATTCTTTATCAGAACCATGATGATGATGATATGAGCTATATATACAACATTTATTTTGACAAGCTGATCAGGTGCTTGGTATCTGACCCAACTTTCCTACTAAAGGTCAAACAATCAAAGGACATGGCTATAAGTTCACAAGGTCCTACAACCAGCCCTTTACCATTTCTCTCTCTCTTAGGACTGGTGGGAAAATTTTATGAGAATAATCCAGAGATGTTGTCTGGCAATGATGTGTTGTGGACATTTGTGAATGAGATTGGAGAGGGATCTCTAAATGTTCACACCCGTGTTTCTTTCTTGAATATGCTGAGTTCATTGGCCTCTAGTGAAGAAAGCACGTCAATTGTTCTTCAGTTACTTAGGTGGAGTGATGAGTTTGAAAAATTCTTTGCTGACTTATCAAGTTATCATGCTCGATCCTTACAACTCTCAGAGGTGGAAGCAAAAGTACTTGCTTCATATTTGAATATTCTTCAAAAGGTTGTGGAACATGGAAACTTCCTTGAATTAAACTCATTTGATTATGTAGAACCTTTATTCAAGCTCCTTCTTTCTGATGTGCCTCCTTTTGTGAAGGGCGCCTTATTTGGGGCAATAAAAGCCTTTGTACATGTCTCCCCTGTCCTAAAAGATAAAATTTGGGAGAAACTTGAGGAGTATGTGAAGAGTGGATATATGCTAGGGGTACATGATATGCAATTTGAGCTGCAGGAAGTAGAAGTGATGATACAGAGCTATCCTTCGACGATTTCATTCCTTGACCTGTTAAATGCTCTTCTTCTGGAAGAAAGAGACTTGGATTGTATGAAGAAAAGATGTGTTGCAATTTTCTTTTGGTTCATTTATAATGATGTTTTCCGGTTAATCCCTCAAAGAGCCTATACAGATCTTTCTGAGAAATGGCAGCTGGTTGTTGCTTGCCTCCGGCATTTTCAAATGATTTTGAGTCTGTATGACATCTCCGAGGACAACGTCAGCAGTTACCTTGTCAGCTCTCAGCATTCCACAGTGATCCCCATGTTAGACTTTCTAGAAGATTTCACAAACGGAAATACTGTTTTCCAGAACATTATGCTTATTCTTTCGCCGGGTGTGAATGTGCTTATATCTGAGAGGACAAATCAAGTGTATGGGAAACTTTTGGAGAAGGCAGTCCAACTGTCTATGGAAATTATAGTCCTTGTATTACAGAACGATTTGCTTGCAGATTACCAGAGACAACTGCATGTTACGCTCTGTCAAGACTTCAATCATATTTTACCTCTGTTGGAGTATGTCGGATATTATTTTGAACCACAAATTCAGCTCTGCTCTATCAAGATCATGTCTATATTGAGTTCTCGCGTGAATGGCTTTGTGGAGTTACTGCTAAGATCCGATTCTGCAAGCTCTGTGATTGGAAAATATGCAGCCTGCCTAGAGTTATGCTCAGAAGTCTGTAAGTCCCTTGGGGATACAAGTGAACCAGCTATACTGATAATGCAGCTTCTAGATGACAATATAAGTCAACCAGCTCCCAATATCACTCATTTTCTGCTCCATTTCGATCTTGAGAGTTCTACTGGACAGATTGTGTTTGAACCAAAATTTCCTCACAGTTGTTTGAAAGTCATTCTTGAAACTTTGGAGAAGCTTTCAAAGCTAAATATGTCACTTCATGAATCTGGGTTTAAGCTCCTTTATAAGTTGTGCTCGGATGCTAAGACACGCAATCCTATGATGAAGCTGTTGAGGGGTAAAGAGTATCTGTTCTTCGTAAAGCACCTATGTGTTTGCCCTTGTCCTGAAGACTCTCTTTGCATCAGTTCCCGCCAGATAACTTGGCTGTCGAACTTTATGCTGGCGATGTCAGTAGATCCACTGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
Nup192

Protein Analysis

957

Amino Acids

108.49

Weight (kDa)

4.9

Isoelectric Point (pI)

49.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nup192 PF11894 426 - 927 3.9e-31 Nuclear pore complex scaffold, nucleoporins 186/192/205
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0024188)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g38790
rosa_chinensis RchiOBHm_Chr2g0152361 RchiOBHm_Chr2g0152391

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1848, 2685
Acc36I ACCTGC 2 cut(s) 372, 727
AccB1I GGYRCC 1 cut(s) 1580
AccBSI CCGCTC 1 cut(s) 76
AccI GTMKAC 1 cut(s) 380
AccII CGCG 1 cut(s) 2346
AciI CCGC 6 cut(s) 10, 62, 68, 76, 468, 2812
AclWI GGATC 7 cut(s) 763, 942, 1276, 1413, 2008, 2370, 2852
AcoI YGGCCR 1 cut(s) 846
AcuI CTGAAG 3 cut(s) 107, 1337, 2808
AcyI GRCGYC 1 cut(s) 1581
AfaI GTAC 4 cut(s) 597, 1452, 1611, 1689
AfiI CCNNNNNNNGG 2 cut(s) 1102, 1590
AflIII ACRYGT 1 cut(s) 1612
AjiI CACGTC 2 cut(s) 857, 1341
AleI CACNNNNGTG 2 cut(s) 1287, 2769
Alw21I GWGCWC 2 cut(s) 55, 2696
Alw26I GTCTC 5 cut(s) 469, 495, 1621, 1788, 2212
AlwI GGATC 7 cut(s) 763, 942, 1276, 1413, 2008, 2370, 2852
AlwNI CAGNNNCTG 1 cut(s) 127
AoxI GGCC 3 cut(s) 536, 846, 1320
ApeKI GCWGC 6 cut(s) 885, 905, 1708, 1906, 2411, 2485
AspLEI GCGC 1 cut(s) 1583
AspS9I GGNCC 4 cut(s) 361, 407, 536, 1142
AsuC2I CCSGG 1 cut(s) 2091
AsuHPI GGTGA 4 cut(s) 170, 651, 710, 929
AvaII GGWCC 3 cut(s) 361, 407, 1142
BalI TGGCCA 1 cut(s) 848
BanI GGYRCC 1 cut(s) 1580
BanII GRGCYC 1 cut(s) 552
BarI GAAGNNNNNNTAC 8 cut(s) 699, 731, 1434, 1466, 1713, 1745, 2738, 2770
BbsI GAAGAC 2 cut(s) 743, 2796
Bbv12I GWGCWC 2 cut(s) 55, 2696
BbvI GCAGC 6 cut(s) 872, 917, 1695, 1918, 2423, 2497
BccI CCATC 2 cut(s) 305, 805
BcgI CGANNNNNNTGC 4 cut(s) 2186, 2220, 2821, 2855
BciVI GTATCC 1 cut(s) 2449
BclI TGATCA 2 cut(s) 859, 1065
BcnI CCSGG 1 cut(s) 2091
BcoDI GTCTC 5 cut(s) 469, 495, 1621, 1788, 2212
BfmI CTRYAG 2 cut(s) 411, 1709
BfoI RGCGCY 1 cut(s) 1584
BfuAI ACCTGC 2 cut(s) 372, 727
BfuI GTATCC 1 cut(s) 2449
BglII AGATCT 1 cut(s) 1888
BisI GCNGC 7 cut(s) 69, 886, 906, 1709, 1907, 2412, 2486
BlpI GCTNAGC 2 cut(s) 168, 525
BlsI GCNGC 7 cut(s) 70, 887, 907, 1710, 1908, 2413, 2487
BmcAI AGTACT 1 cut(s) 1452
Bme1390I CCNGG 1 cut(s) 2091
Bme18I GGWCC 3 cut(s) 361, 407, 1142
BmgBI CACGTC 2 cut(s) 857, 1341
BmgT120I GGNCC 4 cut(s) 361, 407, 536, 1142
BmiI GGNNCC 3 cut(s) 60, 362, 1582
BmrFI CCNGG 1 cut(s) 2091
BmsI GCATC 4 cut(s) 82, 247, 2689, 2811
BpiI GAAGAC 2 cut(s) 743, 2796
BplI GAGNNNNNCTC 2 cut(s) 2414, 2446
Bpu1102I GCTNAGC 2 cut(s) 168, 525
BpuEI CTTGAG 5 cut(s) 297, 482, 648, 1673, 2573
BpuMI CCSGG 1 cut(s) 2091
BsaBI GATNNNNATC 1 cut(s) 933
BsaHI GRCGYC 1 cut(s) 1581
BsaJI CCNNGG 3 cut(s) 603, 1965, 2449
BsaWI WCCGGW 2 cut(s) 155, 1860
Bsc4I CCNNNNNNNGG 2 cut(s) 1102, 1590
Bse118I RCCGGY 1 cut(s) 64
Bse1I ACTGG 5 cut(s) 121, 810, 982, 1188, 2569
Bse3DI GCAATG 3 cut(s) 35, 625, 1234
Bse8I GATNNNNATC 1 cut(s) 933
BseDI CCNNGG 3 cut(s) 603, 1965, 2449
BseGI GGATG 3 cut(s) 97, 508, 2704
BseJI GATNNNNATC 1 cut(s) 933
BseLI CCNNNNNNNGG 2 cut(s) 1102, 1590
BseMI GCAATG 3 cut(s) 35, 625, 1234
BseNI ACTGG 5 cut(s) 121, 810, 982, 1188, 2569
BseRI GAGGAG 2 cut(s) 370, 1670
BseXI GCAGC 6 cut(s) 872, 917, 1695, 1918, 2423, 2497
Bsh1236I CGCG 1 cut(s) 2346
BshFI GGCC 3 cut(s) 538, 848, 1322
BshNI GGYRCC 1 cut(s) 1580
BsiHKAI GWGCWC 2 cut(s) 55, 2696
BsiSI CCGG 6 cut(s) 56, 65, 156, 1861, 1927, 2090
BslFI GGGAC 3 cut(s) 109, 374, 2431
BslI CCNNNNNNNGG 2 cut(s) 1102, 1590
BsmAI GTCTC 5 cut(s) 469, 495, 1621, 1788, 2212
BsmFI GGGAC 3 cut(s) 109, 374, 2431
BsmI GAATGC 1 cut(s) 2002
BsnI GGCC 3 cut(s) 538, 848, 1322
Bsp1286I GDGCHC 3 cut(s) 55, 552, 2696
Bsp1407I TGTACA 1 cut(s) 1609
Bsp1720I GCTNAGC 2 cut(s) 168, 525
BspACI CCGC 6 cut(s) 10, 62, 68, 76, 468, 2812
BspANI GGCC 3 cut(s) 538, 848, 1322
BspFNI CGCG 1 cut(s) 2346
BspHI TCATGA 1 cut(s) 2659
BspLI GGNNCC 3 cut(s) 60, 362, 1582
BspMAI CTGCAG 1 cut(s) 1713
BspMI ACCTGC 2 cut(s) 372, 727
BspPI GGATC 7 cut(s) 763, 942, 1276, 1413, 2008, 2370, 2852
BspQI GCTCTTC 1 cut(s) 1782
BspT107I GGYRCC 1 cut(s) 1580
BsrBI CCGCTC 1 cut(s) 76
BsrDI GCAATG 3 cut(s) 35, 625, 1234
BsrFI RCCGGY 1 cut(s) 64
BsrGI TGTACA 1 cut(s) 1609
BsrI ACTGG 5 cut(s) 121, 810, 982, 1188, 2569
BssAI RCCGGY 1 cut(s) 64
BssECI CCNNGG 3 cut(s) 603, 1965, 2449
BssNAI GTATAC 1 cut(s) 381
BssNI GRCGYC 1 cut(s) 1581
BssT1I CCWWGG 2 cut(s) 603, 2449
Bst1107I GTATAC 1 cut(s) 381
Bst4CI ACNGT 6 cut(s) 600, 841, 2011, 2059, 2163, 2600
Bst6I CTCTTC 2 cut(s) 1661, 1782
BstACI GRCGYC 1 cut(s) 1581
BstAUI TGTACA 1 cut(s) 1609
BstC8I GCNNGC 8 cut(s) 66, 330, 470, 1921, 2205, 2389, 2416, 2844
BstENI CCTNNNNNAGG 1 cut(s) 1100
BstF5I GGATG 3 cut(s) 97, 508, 2704
BstFNI CGCG 1 cut(s) 2346
BstH2I RGCGCY 1 cut(s) 1584
BstHHI GCGC 1 cut(s) 1583
BstMAI GTCTC 5 cut(s) 469, 495, 1621, 1788, 2212
BstNSI RCATGY 3 cut(s) 332, 1616, 2231
BstSCI CCNGG 1 cut(s) 2089
BstSFI CTRYAG 2 cut(s) 411, 1709
BstUI CGCG 1 cut(s) 2346
BstV1I GCAGC 6 cut(s) 872, 917, 1695, 1918, 2423, 2497
BstV2I GAAGAC 2 cut(s) 743, 2796
BstX2I RGATCY 4 cut(s) 1268, 1888, 2375, 2857
BstXI CCANNNNNNTGG 1 cut(s) 448
BstYI RGATCY 4 cut(s) 1268, 1888, 2375, 2857
BstZ17I GTATAC 1 cut(s) 381
BsuI GTATCC 1 cut(s) 2449
BsuRI GGCC 3 cut(s) 538, 848, 1322
BtgZI GCGATG 2 cut(s) 110, 2861
BtrI CACGTC 2 cut(s) 857, 1341
BtsCI GGATG 3 cut(s) 97, 508, 2704
BtsIMutI CAGTG 3 cut(s) 803, 2016, 2861
BveI ACCTGC 2 cut(s) 372, 727
Cac8I GCNNGC 8 cut(s) 66, 330, 470, 1921, 2205, 2389, 2416, 2844
CaiI CAGNNNCTG 1 cut(s) 127
CciI TCATGA 1 cut(s) 2659
CfoI GCGC 1 cut(s) 1583
Cfr10I RCCGGY 1 cut(s) 64
Cfr13I GGNCC 4 cut(s) 361, 407, 536, 1142
Csp6I GTAC 4 cut(s) 596, 1451, 1610, 1688
CviQI GTAC 4 cut(s) 596, 1451, 1610, 1688
DinI GGCGCC 1 cut(s) 1582
EaeI YGGCCR 1 cut(s) 846
Eam1104I CTCTTC 2 cut(s) 1661, 1782
EarI CTCTTC 2 cut(s) 1661, 1782
EciI GGCGGA 1 cut(s) 51
Eco130I CCWWGG 2 cut(s) 603, 2449
Eco24I GRGCYC 1 cut(s) 552
Eco32I GATATC 1 cut(s) 436
Eco47I GGWCC 3 cut(s) 361, 407, 1142
Eco57I CTGAAG 3 cut(s) 107, 1337, 2808
EcoNI CCTNNNNNAGG 1 cut(s) 1100
EcoO109I RGGNCCY 2 cut(s) 361, 1142
EcoRI GAATTC 1 cut(s) 573
EcoRV GATATC 1 cut(s) 436
EcoT14I CCWWGG 2 cut(s) 603, 2449
EcoT38I GRGCYC 1 cut(s) 552
EgeI GGCGCC 1 cut(s) 1582
EheI GGCGCC 1 cut(s) 1582
ErhI CCWWGG 2 cut(s) 603, 2449
FalI AAGNNNNNCTT 8 cut(s) 883, 915, 1568, 1600, 2601, 2633, 2781, 2813
FaqI GGGAC 3 cut(s) 109, 374, 2431
FauI CCCGC 2 cut(s) 461, 2819
FbaI TGATCA 2 cut(s) 859, 1065
FblI GTMKAC 1 cut(s) 380
Fnu4HI GCNGC 7 cut(s) 69, 886, 906, 1709, 1907, 2412, 2486
FokI GGATG 3 cut(s) 104, 515, 2711
FriOI GRGCYC 1 cut(s) 552
Fsp4HI GCNGC 7 cut(s) 69, 886, 906, 1709, 1907, 2412, 2486
GlaI GCGC 1 cut(s) 1582
GluI GCNGC 7 cut(s) 69, 886, 906, 1709, 1907, 2412, 2486
HaeII RGCGCY 1 cut(s) 1584
HaeIII GGCC 3 cut(s) 538, 848, 1322
HapII CCGG 6 cut(s) 56, 65, 156, 1861, 1927, 2090
HhaI GCGC 1 cut(s) 1583
Hin1I GRCGYC 1 cut(s) 1581
Hin6I GCGC 1 cut(s) 1581
HinP1I GCGC 1 cut(s) 1581
HincII GTYRAC 2 cut(s) 655, 2510
HindII GTYRAC 2 cut(s) 655, 2510
HindIII AAGCTT 1 cut(s) 2633
HpaII CCGG 6 cut(s) 56, 65, 156, 1861, 1927, 2090
HphI GGTGA 4 cut(s) 170, 651, 710, 929
Hpy166II GTNNAC 7 cut(s) 381, 655, 1136, 1242, 1282, 2465, 2510
Hpy8I GTNNAC 7 cut(s) 381, 655, 1136, 1242, 1282, 2465, 2510
Hpy99I CGWCG 3 cut(s) 151, 197, 1750
HpyAV CCTTC 7 cut(s) 82, 123, 826, 1559, 1570, 1752, 2143
HpyCH4III ACNGT 6 cut(s) 600, 841, 2011, 2059, 2163, 2600
HpyCH4IV ACGT 4 cut(s) 246, 856, 1340, 1974
HpySE526I ACGT 4 cut(s) 246, 856, 1340, 1974
Hsp92I GRCGYC 1 cut(s) 1581
HspAI GCGC 1 cut(s) 1581
KasI GGCGCC 1 cut(s) 1580
KroI GCCGGC 1 cut(s) 64
KroNI GCCGGC 1 cut(s) 66
Ksp22I TGATCA 2 cut(s) 859, 1065
LguI GCTCTTC 1 cut(s) 1782
LmnI GCTCC 7 cut(s) 58, 64, 955, 1551, 2521, 2544, 2682
Lsp1109I GCAGC 6 cut(s) 872, 917, 1695, 1918, 2423, 2497
LweI GCATC 4 cut(s) 82, 247, 2689, 2811
MaeII ACGT 4 cut(s) 246, 856, 1340, 1974
MaeIII GTNAC 6 cut(s) 919, 1356, 1982, 2230, 2364, 2652
MbiI CCGCTC 1 cut(s) 76
MfeI CAATTG 1 cut(s) 1344
MflI RGATCY 4 cut(s) 1268, 1888, 2375, 2857
MhlI GDGCHC 3 cut(s) 55, 552, 2696
MlsI TGGCCA 1 cut(s) 848
MluNI TGGCCA 1 cut(s) 848
Mly113I GGCGCC 1 cut(s) 1581
MlyI GAGTC 6 cut(s) 146, 235, 650, 802, 1957, 2786
MmeI TCCRAC 6 cut(s) 111, 129, 198, 2182, 2250, 2260
Mox20I TGGCCA 1 cut(s) 848
MreI CGCCGGCG 1 cut(s) 64
MroNI GCCGGC 1 cut(s) 64
MscI TGGCCA 1 cut(s) 848
MseI TTAA 7 cut(s) 507, 675, 695, 1511, 1769, 1865, 2673
MslI CAYNNNNRTG 4 cut(s) 48, 1020, 1287, 2769
Msp20I TGGCCA 1 cut(s) 848
MspA1I CMGCKG 2 cut(s) 524, 1909
MspI CCGG 6 cut(s) 56, 65, 156, 1861, 1927, 2090
MspR9I CCNGG 1 cut(s) 2091
MunI CAATTG 1 cut(s) 1344
Mva1269I GAATGC 1 cut(s) 2002
MvnI CGCG 1 cut(s) 2346
NaeI GCCGGC 1 cut(s) 66
NarI GGCGCC 1 cut(s) 1581
NciI CCSGG 1 cut(s) 2091
NgoMIV GCCGGC 1 cut(s) 64
NlaIV GGNNCC 3 cut(s) 60, 362, 1582
NmuCI GTSAC 2 cut(s) 919, 2652
NspI RCATGY 3 cut(s) 332, 1616, 2231
OliI CACNNNNGTG 2 cut(s) 1287, 2769
PaeI GCATGC 1 cut(s) 332
PagI TCATGA 1 cut(s) 2659
PciI ACATGT 1 cut(s) 1612
PciSI GCTCTTC 1 cut(s) 1782
PctI GAATGC 1 cut(s) 2002
PdiI GCCGGC 1 cut(s) 66
PflFI GACNNNGTC 2 cut(s) 103, 1973
PkrI GCNGC 7 cut(s) 70, 887, 907, 1710, 1908, 2413, 2487
PleI GAGTC 6 cut(s) 146, 234, 650, 801, 1956, 2786
PluTI GGCGCC 1 cut(s) 1584
PpsI GAGTC 6 cut(s) 146, 234, 650, 801, 1956, 2786
PpuMI RGGWCCY 2 cut(s) 361, 1142
PscI ACATGT 1 cut(s) 1612
PsiI TTATAA 2 cut(s) 1848, 2685
Psp5II RGGWCCY 2 cut(s) 361, 1142
PspN4I GGNNCC 3 cut(s) 60, 362, 1582
PspPI GGNCC 4 cut(s) 361, 407, 536, 1142
PspPPI RGGWCCY 2 cut(s) 361, 1142
PsrI GAACNNNNNNTAC 2 cut(s) 2457, 2489
PstI CTGCAG 1 cut(s) 1713
PstNI CAGNNNCTG 1 cut(s) 127
PsuI RGATCY 4 cut(s) 1268, 1888, 2375, 2857
PsyI GACNNNGTC 2 cut(s) 103, 1973
PvuII CAGCTG 2 cut(s) 524, 1909
RsaI GTAC 4 cut(s) 597, 1452, 1611, 1689
RsaNI GTAC 4 cut(s) 596, 1451, 1610, 1688
RseI CAYNNNNRTG 4 cut(s) 48, 1020, 1287, 2769
SapI GCTCTTC 1 cut(s) 1782
SaqAI TTAA 7 cut(s) 507, 675, 695, 1511, 1769, 1865, 2673
SatI GCNGC 7 cut(s) 69, 886, 906, 1709, 1907, 2412, 2486
Sau96I GGNCC 4 cut(s) 361, 407, 536, 1142
ScaI AGTACT 1 cut(s) 1452
SchI GAGTC 6 cut(s) 146, 235, 650, 802, 1957, 2786
ScrFI CCNGG 1 cut(s) 2091
SduI GDGCHC 3 cut(s) 55, 552, 2696
SfaNI GCATC 4 cut(s) 82, 247, 2689, 2811
SfcI CTRYAG 2 cut(s) 411, 1709
SfoI GGCGCC 1 cut(s) 1582
SgrAI CRCCGGYG 1 cut(s) 64
SinI GGWCC 3 cut(s) 361, 407, 1142
SmiMI CAYNNNNRTG 4 cut(s) 48, 1020, 1287, 2769
SmlI CTYRAG 5 cut(s) 312, 497, 663, 1652, 2552
SmoI CTYRAG 5 cut(s) 312, 497, 663, 1652, 2552
SphI GCATGC 1 cut(s) 332
SsiI CCGC 6 cut(s) 10, 62, 68, 76, 468, 2812
SspDI GGCGCC 1 cut(s) 1580
SspI AATATT 1 cut(s) 1471
StyD4I CCNGG 1 cut(s) 2089
StyI CCWWGG 2 cut(s) 603, 2449
TaaI ACNGT 6 cut(s) 600, 841, 2011, 2059, 2163, 2600
TaiI ACGT 4 cut(s) 249, 859, 1343, 1977
TaqI TCGA 7 cut(s) 232, 369, 427, 1417, 1745, 2547, 2831
TaqII GACCGA 1 cut(s) 261
TatI WGTACW 3 cut(s) 595, 1450, 1609
TauI GCSGC 1 cut(s) 71
Tru1I TTAA 7 cut(s) 507, 675, 695, 1511, 1769, 1865, 2673
Tru9I TTAA 7 cut(s) 507, 675, 695, 1511, 1769, 1865, 2673
TscAI CASTG 3 cut(s) 810, 2016, 2868
TseFI GTSAC 2 cut(s) 919, 2652
TseI GCWGC 6 cut(s) 885, 905, 1708, 1906, 2411, 2485
Tsp45I GTSAC 2 cut(s) 919, 2652
TspGWI ACGGA 3 cut(s) 135, 210, 2064
TspRI CASTG 3 cut(s) 810, 2016, 2868
Tth111I GACNNNGTC 2 cut(s) 103, 1973
VpaK11BI GGWCC 3 cut(s) 361, 407, 1142
XagI CCTNNNNNAGG 1 cut(s) 1100
XbaI TCTAGA 2 cut(s) 2032, 2491
XceI RCATGY 3 cut(s) 332, 1616, 2231
XmiI GTMKAC 1 cut(s) 380
ZrmI AGTACT 1 cut(s) 1452
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.