FvH4_6g53960
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
39470064 .. 39473825
3762 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g53960.t2

Sequence Viewer

Length: 1281 bp
ATGGGATATTGCCCCTGCTTCGGGATCAGAAAGGGCAAGAAGCTCAAGCGCGGCAAAGACGACGACGTTCACAAAACCTCAACCAAGGTCGAGGACATACACCCTTCTACCCATAATGCCGAGCCTCAATTGTCTTCTGCTCAAGAAGATGAAACTAATTCCCCCACTAAGGCTCAGACATTCACCTTCCGTGAACTTGCAACTGCAACCAAAAACTTTAGGGCGGAATGCTTTATTGGGGAAGGAGGATTTGGCCCTGTATACAAAGGACAATTGAGCTCTGGTCGAGTTGTAGCTGTAAAGAAACTCGATCAGACTGGTGTTCAAGGAGACAAGGAGTTTCTGGTGGAGGTTCTAATGCTTTCTCTTCTGCGTCACCCAAACCTTGTAAGTTTAATTGGTTACTGTGCTGAAGGGGAGCAGCGCCTGCTTGTCTATGAATACATGCCCTTAGGGTCCTTGGCAGATCATCTCCATGATCTTAGACCTGATAAAGAACCACTTGATTGGAACACAAGGATGATGATAGCGGCTGGTGCAGCCAAAGGGTTGGAATATCTTCACCATGATGCTGAACCACCTGTCATATACAGGGATGTAAAATCAGCCAACATTTTGTTGGGAGAGGATTTTTACCCGAAACTTTCTGATTTTGGGCTTGCAAAGTTTGGTCCTACTGGAGATAGATCGCATGTCTCCACCAGGGTCATGGGAACTCATGGTTACTGTGCTCCTGAGTATGCTAAAAGTGGGAGGTTGACAGCAAAGTCGGATATCTACAGTTTCGGCATAGTCTTGCTGGAGCTGCTTACAGGACATAAGGCAGTTGATGGTACTCTTGGTCGTAATAAACAACTTGTTGAATGGGCACGTCCTTATATGAGAAATCCCAAGAATCTTACCATGCAATTTGCAGATCCATATCTCAGAGGGCAGTTTCCGTTACATATCTTGAGAAAAGCATTAGCAGTGGCTTCCATGTGTCTGCAAGAAAATGCTTCTCTGCGACCAACCATGAGGGATGTGGTACTTGCCTTGAATTTCTTGACAACTCATCCATACAATGAACCAAAGGTGTTGAGCATCAGCACCGAGCGGGTTGAAGAAATAAAGAGTTCGAATGCATCAGGGAATAACTCTCCAAATGAAACAACTTCTATGTTAAACAAGAACGATGAGCGAGAGAGAGCTGTGGCAGAAGCCAAGATGTGGGGAGAGACTTGGAGAGACAAACGAAGACCAGGTGCACAAAATAGTCATCATGATACCTTTAGTCTTTAG

Protein Analysis

427

Amino Acids

47.61

Weight (kDa)

8.36

Isoelectric Point (pI)

34.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 2 - 224 2e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 2 - 225 4.4e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015678)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 766
AccB7I CCANNNNNTGG 1 cut(s) 1209
AccBSI CCGCTC 1 cut(s) 1096
AccI GTMKAC 1 cut(s) 261
AccII CGCG 1 cut(s) 51
AciI CCGC 4 cut(s) 51, 224, 530, 1096
AclWI GGATC 2 cut(s) 32, 911
AcsI RAATTY 1 cut(s) 1039
AcuI CTGAAG 1 cut(s) 432
AfaI GTAC 2 cut(s) 835, 1029
AfiI CCNNNNNNNGG 4 cut(s) 20, 21, 169, 1209
AgsI TTSAA 4 cut(s) 326, 863, 1039, 1103
AjiI CACGTC 1 cut(s) 872
AjnI CCWGG 2 cut(s) 701, 1240
AjuI GAANNNNNNNTTGG 4 cut(s) 219, 234, 251, 266
AluBI AGCT 5 cut(s) 43, 279, 296, 805, 1190
AluI AGCT 5 cut(s) 43, 279, 296, 805, 1190
Alw21I GWGCWC 3 cut(s) 281, 733, 1249
Alw26I GTCTC 4 cut(s) 324, 700, 1211, 1221
Alw44I GTGCAC 1 cut(s) 1245
AlwI GGATC 2 cut(s) 32, 911
AlwNI CAGNNNCTG 1 cut(s) 427
AoxI GGCC 1 cut(s) 253
ApaLI GTGCAC 1 cut(s) 1245
ApeKI GCWGC 3 cut(s) 421, 539, 805
ApoI RAATTY 1 cut(s) 1039
Asp700I GAANNNNTTC 1 cut(s) 558
AspLEI GCGC 2 cut(s) 51, 426
AspS9I GGNCC 3 cut(s) 254, 456, 671
AsuHPI GGTGA 3 cut(s) 175, 368, 554
AsuII TTCGAA 1 cut(s) 1118
AvaII GGWCC 2 cut(s) 456, 671
AxyI CCTNAGG 1 cut(s) 451
BaeGI GKGCMC 2 cut(s) 871, 1249
BanII GRGCYC 1 cut(s) 281
BbsI GAAGAC 2 cut(s) 126, 1243
Bbv12I GWGCWC 3 cut(s) 281, 733, 1249
BbvI GCAGC 3 cut(s) 433, 551, 792
BccI CCATC 1 cut(s) 824
BciT130I CCWGG 2 cut(s) 703, 1242
BcoDI GTCTC 4 cut(s) 324, 700, 1211, 1221
BfmI CTRYAG 1 cut(s) 778
BfoI RGCGCY 1 cut(s) 427
BisI GCNGC 5 cut(s) 52, 422, 531, 540, 806
BlsI GCNGC 5 cut(s) 53, 423, 532, 541, 807
Bme1390I CCNGG 2 cut(s) 703, 1242
Bme18I GGWCC 2 cut(s) 456, 671
BmgBI CACGTC 1 cut(s) 872
BmgT120I GGNCC 3 cut(s) 254, 456, 671
BmiI GGNNCC 1 cut(s) 457
BmrFI CCNGG 2 cut(s) 703, 1242
BmsI GCATC 3 cut(s) 559, 1092, 1133
BpiI GAAGAC 2 cut(s) 126, 1243
BpmI CTGGAG 2 cut(s) 699, 821
Bpu14I TTCGAA 1 cut(s) 1118
BpuEI CTTGAG 3 cut(s) 29, 126, 973
BsaBI GATNNNNATC 1 cut(s) 921
BsaJI CCNNGG 3 cut(s) 84, 459, 702
Bsc4I CCNNNNNNNGG 4 cut(s) 20, 21, 169, 1209
Bse1I ACTGG 2 cut(s) 322, 682
Bse21I CCTNAGG 1 cut(s) 451
Bse8I GATNNNNATC 1 cut(s) 921
BseBI CCWGG 2 cut(s) 703, 1242
BseDI CCNNGG 3 cut(s) 84, 459, 702
BseGI GGATG 4 cut(s) 525, 601, 1027, 1054
BseJI GATNNNNATC 1 cut(s) 921
BseLI CCNNNNNNNGG 4 cut(s) 20, 21, 169, 1209
BseMII CTCAG 3 cut(s) 188, 726, 940
BseNI ACTGG 2 cut(s) 322, 682
BseSI GKGCMC 2 cut(s) 871, 1249
BseXI GCAGC 3 cut(s) 433, 551, 792
BsgI GTGCAG 1 cut(s) 558
Bsh1236I CGCG 1 cut(s) 51
BshFI GGCC 1 cut(s) 255
BsiHKAI GWGCWC 3 cut(s) 281, 733, 1249
BslI CCNNNNNNNGG 4 cut(s) 20, 21, 169, 1209
BsmAI GTCTC 4 cut(s) 324, 700, 1211, 1221
BsmI GAATGC 2 cut(s) 233, 1126
BsnI GGCC 1 cut(s) 255
Bsp119I TTCGAA 1 cut(s) 1118
Bsp1286I GDGCHC 4 cut(s) 281, 733, 871, 1249
Bsp143I GATC 6 cut(s) 24, 310, 466, 478, 686, 916
BspACI CCGC 4 cut(s) 51, 224, 530, 1096
BspANI GGCC 1 cut(s) 255
BspCNI CTCAG 3 cut(s) 187, 727, 939
BspFNI CGCG 1 cut(s) 51
BspHI TCATGA 1 cut(s) 1261
BspLI GGNNCC 1 cut(s) 457
BspPI GGATC 2 cut(s) 32, 911
BspT104I TTCGAA 1 cut(s) 1118
BsrBI CCGCTC 1 cut(s) 1096
BsrI ACTGG 2 cut(s) 322, 682
BssECI CCNNGG 3 cut(s) 84, 459, 702
BssMI GATC 6 cut(s) 24, 310, 466, 478, 686, 916
BssNAI GTATAC 1 cut(s) 262
BssT1I CCWWGG 2 cut(s) 84, 459
Bst1107I GTATAC 1 cut(s) 262
Bst2UI CCWGG 2 cut(s) 703, 1242
Bst4CI ACNGT 3 cut(s) 407, 728, 782
Bst6I CTCTTC 1 cut(s) 372
BstAPI GCANNNNNTGC 1 cut(s) 427
BstBI TTCGAA 1 cut(s) 1118
BstC8I GCNNGC 2 cut(s) 428, 660
BstDEI CTNAG 6 cut(s) 168, 174, 451, 482, 735, 926
BstF5I GGATG 4 cut(s) 525, 601, 1027, 1054
BstFNI CGCG 1 cut(s) 51
BstH2I RGCGCY 1 cut(s) 427
BstHHI GCGC 2 cut(s) 51, 426
BstKTI GATC 6 cut(s) 27, 313, 469, 481, 689, 919
BstMAI GTCTC 4 cut(s) 324, 700, 1211, 1221
BstMBI GATC 6 cut(s) 24, 310, 466, 478, 686, 916
BstMWI GCNNNNNNNGC 4 cut(s) 427, 536, 539, 805
BstNI CCWGG 2 cut(s) 703, 1242
BstNSI RCATGY 2 cut(s) 448, 695
BstSCI CCNGG 2 cut(s) 701, 1240
BstSFI CTRYAG 1 cut(s) 778
BstSLI GKGCMC 2 cut(s) 871, 1249
BstUI CGCG 1 cut(s) 51
BstV1I GCAGC 3 cut(s) 433, 551, 792
BstV2I GAAGAC 2 cut(s) 126, 1243
BstX2I RGATCY 1 cut(s) 916
BstXI CCANNNNNNTGG 3 cut(s) 507, 550, 709
BstYI RGATCY 1 cut(s) 916
BstZ17I GTATAC 1 cut(s) 262
Bsu36I CCTNAGG 1 cut(s) 451
BsuRI GGCC 1 cut(s) 255
BtrI CACGTC 1 cut(s) 872
BtsCI GGATG 4 cut(s) 525, 601, 1027, 1054
BtsI GCAGTG 1 cut(s) 975
BtsIMutI CAGTG 1 cut(s) 975
Cac8I GCNNGC 2 cut(s) 428, 660
CaiI CAGNNNCTG 1 cut(s) 427
CciI TCATGA 1 cut(s) 1261
CfoI GCGC 2 cut(s) 51, 426
Cfr13I GGNCC 3 cut(s) 254, 456, 671
CseI GACGC 1 cut(s) 362
CsiI ACCWGGT 1 cut(s) 1240
Csp6I GTAC 2 cut(s) 834, 1028
CviQI GTAC 2 cut(s) 834, 1028
DdeI CTNAG 6 cut(s) 168, 174, 451, 482, 735, 926
DpnI GATC 6 cut(s) 26, 312, 468, 480, 688, 918
DpnII GATC 6 cut(s) 24, 310, 466, 478, 686, 916
DrdI GACNNNNNNGTC 1 cut(s) 766
DseDI GACNNNNNNGTC 1 cut(s) 766
Eam1104I CTCTTC 1 cut(s) 372
EarI CTCTTC 1 cut(s) 372
EciI GGCGGA 1 cut(s) 239
Ecl136II GAGCTC 1 cut(s) 279
Eco130I CCWWGG 2 cut(s) 84, 459
Eco24I GRGCYC 1 cut(s) 281
Eco32I GATATC 1 cut(s) 775
Eco47I GGWCC 2 cut(s) 456, 671
Eco53kI GAGCTC 1 cut(s) 279
Eco57I CTGAAG 1 cut(s) 432
Eco81I CCTNAGG 1 cut(s) 451
EcoICRI GAGCTC 1 cut(s) 279
EcoO109I RGGNCCY 1 cut(s) 456
EcoRII CCWGG 2 cut(s) 701, 1240
EcoRV GATATC 1 cut(s) 775
EcoT14I CCWWGG 2 cut(s) 84, 459
EcoT22I ATGCAT 1 cut(s) 1126
EcoT38I GRGCYC 1 cut(s) 281
ErhI CCWWGG 2 cut(s) 84, 459
FalI AAGNNNNNCTT 2 cut(s) 486, 518
FauI CCCGC 1 cut(s) 1089
FblI GTMKAC 1 cut(s) 261
Fnu4HI GCNGC 5 cut(s) 52, 422, 531, 540, 806
FokI GGATG 4 cut(s) 532, 608, 1034, 1041
FriOI GRGCYC 1 cut(s) 281
Fsp4HI GCNGC 5 cut(s) 52, 422, 531, 540, 806
GlaI GCGC 2 cut(s) 50, 425
GluI GCNGC 5 cut(s) 52, 422, 531, 540, 806
GsuI CTGGAG 2 cut(s) 699, 821
HaeII RGCGCY 1 cut(s) 427
HaeIII GGCC 1 cut(s) 255
HgaI GACGC 1 cut(s) 362
HhaI GCGC 2 cut(s) 51, 426
Hin6I GCGC 2 cut(s) 49, 424
HinP1I GCGC 2 cut(s) 49, 424
HincII GTYRAC 1 cut(s) 759
HindII GTYRAC 1 cut(s) 759
HinfI GANTC 1 cut(s) 895
HphI GGTGA 3 cut(s) 175, 368, 554
Hpy166II GTNNAC 5 cut(s) 70, 194, 262, 759, 1247
Hpy188I TCNGA 6 cut(s) 29, 177, 315, 649, 772, 929
Hpy188III TCNNGA 6 cut(s) 22, 143, 734, 952, 1045, 1262
Hpy8I GTNNAC 5 cut(s) 70, 194, 262, 759, 1247
Hpy99I CGWCG 2 cut(s) 65, 68
HpyAV CCTTC 4 cut(s) 114, 196, 236, 407
HpyCH4III ACNGT 3 cut(s) 407, 728, 782
HpyCH4IV ACGT 2 cut(s) 66, 871
HpyCH4V TGCA 9 cut(s) 200, 206, 539, 662, 907, 914, 988, 1124, 1247
HpyF10VI GCNNNNNNNGC 4 cut(s) 427, 536, 539, 805
HpyF3I CTNAG 6 cut(s) 168, 174, 451, 482, 735, 926
HpySE526I ACGT 2 cut(s) 66, 871
HspAI GCGC 2 cut(s) 49, 424
Kzo9I GATC 6 cut(s) 24, 310, 466, 478, 686, 916
LmnI GCTCC 3 cut(s) 418, 736, 802
Lsp1109I GCAGC 3 cut(s) 433, 551, 792
LweI GCATC 3 cut(s) 559, 1092, 1133
MabI ACCWGGT 1 cut(s) 1240
MaeII ACGT 2 cut(s) 66, 871
MaeIII GTNAC 4 cut(s) 374, 401, 722, 942
MalI GATC 6 cut(s) 26, 312, 468, 480, 688, 918
MbiI CCGCTC 1 cut(s) 1096
MboI GATC 6 cut(s) 24, 310, 466, 478, 686, 916
MboII GAAGA 6 cut(s) 126, 158, 359, 551, 1115, 1248
MfeI CAATTG 2 cut(s) 128, 272
MflI RGATCY 1 cut(s) 916
MhlI GDGCHC 4 cut(s) 281, 733, 871, 1249
MluCI AATT 6 cut(s) 128, 157, 272, 396, 908, 1039
MmeI TCCRAC 2 cut(s) 531, 750
MnlI CCTC 9 cut(s) 85, 88, 135, 239, 343, 619, 747, 923, 1011
Mph1103I ATGCAT 1 cut(s) 1126
MroXI GAANNNNTTC 1 cut(s) 558
MseI TTAA 2 cut(s) 395, 1163
MslI CAYNNNNRTG 3 cut(s) 474, 518, 567
MspR9I CCNGG 2 cut(s) 703, 1242
MunI CAATTG 2 cut(s) 128, 272
Mva1269I GAATGC 2 cut(s) 233, 1126
MvaI CCWGG 2 cut(s) 703, 1242
MvnI CGCG 1 cut(s) 51
MwoI GCNNNNNNNGC 4 cut(s) 427, 536, 539, 805
NdeII GATC 6 cut(s) 24, 310, 466, 478, 686, 916
NlaIV GGNNCC 1 cut(s) 457
NmeAIII GCCGAG 1 cut(s) 145
NmuCI GTSAC 1 cut(s) 374
NsiI ATGCAT 1 cut(s) 1126
NspI RCATGY 2 cut(s) 448, 695
NspV TTCGAA 1 cut(s) 1118
PagI TCATGA 1 cut(s) 1261
PctI GAATGC 2 cut(s) 233, 1126
PdmI GAANNNNTTC 1 cut(s) 558
PfeI GAWTC 1 cut(s) 895
PflMI CCANNNNNTGG 1 cut(s) 1209
PkrI GCNGC 5 cut(s) 53, 423, 532, 541, 807
PpuMI RGGWCCY 1 cut(s) 456
Psp124BI GAGCTC 1 cut(s) 281
Psp5II RGGWCCY 1 cut(s) 456
Psp6I CCWGG 2 cut(s) 701, 1240
PspGI CCWGG 2 cut(s) 701, 1240
PspN4I GGNNCC 1 cut(s) 457
PspPI GGNCC 3 cut(s) 254, 456, 671
PspPPI RGGWCCY 1 cut(s) 456
PstNI CAGNNNCTG 1 cut(s) 427
PsuI RGATCY 1 cut(s) 916
RsaI GTAC 2 cut(s) 835, 1029
RsaNI GTAC 2 cut(s) 834, 1028
RseI CAYNNNNRTG 3 cut(s) 474, 518, 567
SacI GAGCTC 1 cut(s) 281
SaqAI TTAA 2 cut(s) 395, 1163
SatI GCNGC 5 cut(s) 52, 422, 531, 540, 806
Sau3AI GATC 6 cut(s) 24, 310, 466, 478, 686, 916
Sau96I GGNCC 3 cut(s) 254, 456, 671
ScrFI CCNGG 2 cut(s) 703, 1242
SduI GDGCHC 4 cut(s) 281, 733, 871, 1249
SexAI ACCWGGT 1 cut(s) 1240
SfaNI GCATC 3 cut(s) 559, 1092, 1133
SfcI CTRYAG 1 cut(s) 778
SfuI TTCGAA 1 cut(s) 1118
SinI GGWCC 2 cut(s) 456, 671
SmiMI CAYNNNNRTG 3 cut(s) 474, 518, 567
SmlI CTYRAG 3 cut(s) 44, 141, 952
SmoI CTYRAG 3 cut(s) 44, 141, 952
Sse9I AATT 6 cut(s) 128, 157, 272, 396, 908, 1039
SsiI CCGC 4 cut(s) 51, 224, 530, 1096
SstI GAGCTC 1 cut(s) 281
StyD4I CCNGG 2 cut(s) 701, 1240
StyI CCWWGG 2 cut(s) 84, 459
TaaI ACNGT 3 cut(s) 407, 728, 782
TaiI ACGT 2 cut(s) 69, 874
TaqI TCGA 4 cut(s) 90, 286, 309, 1118
TasI AATT 6 cut(s) 128, 157, 272, 396, 908, 1039
TauI GCSGC 2 cut(s) 54, 533
TfiI GAWTC 1 cut(s) 895
Tru1I TTAA 2 cut(s) 395, 1163
Tru9I TTAA 2 cut(s) 395, 1163
TscAI CASTG 1 cut(s) 975
TseFI GTSAC 1 cut(s) 374
TseI GCWGC 3 cut(s) 421, 539, 805
Tsp45I GTSAC 1 cut(s) 374
TspDTI ATGAA 4 cut(s) 165, 453, 1080, 1161
TspGWI ACGGA 2 cut(s) 179, 930
TspRI CASTG 1 cut(s) 975
Van91I CCANNNNNTGG 1 cut(s) 1209
VneI GTGCAC 1 cut(s) 1245
VpaK11BI GGWCC 2 cut(s) 456, 671
XapI RAATTY 1 cut(s) 1039
XceI RCATGY 2 cut(s) 448, 695
XcmI CCANNNNNNNNNTGG 3 cut(s) 616, 706, 1021
XmiI GTMKAC 1 cut(s) 261
XmnI GAANNNNTTC 1 cut(s) 558
Zsp2I ATGCAT 1 cut(s) 1126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.