MD09G1006900.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
493939 .. 497583
3645 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1006900.v1.1.491

Sequence Viewer

Length: 1236 bp
ATGGGCTATTGCCCATGTTTCGGGTTCAGGAAGGGGAGGAAGCTCGAGACCGGTACGGACGAAGCCAAAGACGACAAAACCGACAAAGCCGACAAGAAGAAGACGATAAACAACAAACCTCAAGAAAATGTGACTCAATTGTCATCTTCCGAAGAAGATGGAATTAATGGCAATAACAAGGCTCAGACATTCACTTTTCGTGAGCTTGCAACTGCAACTAAAAATTTTAGGACGGATTCCTGTATTGGAGAAGGTGGTTTTGGGCCTGTGTACAAAGGGAAACTGGCCTCTGGTCAAGCTGTTGCCGTAAAAAAACTTGATCAGACAGGTCTTCAAGGAGAAAAGGAGTTTCTGGTGGAGGTTCTCATGCTCTCTCTCTTGCGTCATTCTAATCTTGTCAGTTTAATTGGTTACTGTGCTGAAGGAGAGCAGCGCCTTCTTGTCTACGAATACATGCCGTTAGGGTCCTTGGCAGACCACCTCCATGATCTTCCACCGGGTCAGGAGCCAATTGATTGGAATAAACGGATGATGATAGCTGCTGGTGCAGCCAAAGGATTGGAATATCTTCACCATGAGGCTGATCCACCTGTGATATATAGGGATCTAAAATCAGCCAACATTTTATTGGGTGAAGATTTCTTCCCAAAGCTTTCCGATTTTGGGCTTGCAAAATTTGGTCCAACAGGAGATAGATCGCATGTCTCCACCAGGGTCATGGGCACCCATGGCTACTGTGCTCCTGAATATGCTAAAAGTGGAAAGTTGACGGCAAAGTCTGACATCTACAGTTTTGGGGTAGTATTGCTGGAGCTGATCACTGGACATAAGGCGGTCGATAGCAGTCTTGGTCGTGAAAAACATCTTGTTGAGTGGGCACGTCCGTTTATGAAAGACCACAAGAATATTGCGCAACTTGCAGATCCACTTCTTAGAGGTCGGTTTCAGGTATCAATATTGAGGAAAGCCTTTGAAGTAGCTTTCATGTGTCTCAGGGAGGATGCCAGTACCCGGCCTTCCATGACTGAAGTGGTGCTTGCTATGAATTACTTGACCTCCCGCCTGTATAGCGAACCAGATGAGAACAAAGTGGTTGACAAAAAGAATTCAGAGCCTAACACTCCAGATGAAACGACGGCTATGTTGAAAAAGGAGTCCGAAAGAGAGAGAGCGGTTGCAGAGGCCAAGATGTGGGGAGAGACTTGGAGAGACAAACGAAGACAAGGAACTCCCTAG

Protein Analysis

412

Amino Acids

45.89

Weight (kDa)

7.62

Isoelectric Point (pI)

32.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 78 - 345 3.7e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 79 - 345 1.1e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015678)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 139, 775
Acc16I TGCGCA 1 cut(s) 912
AccB1I GGYRCC 1 cut(s) 722
AccB7I CCANNNNNTGG 1 cut(s) 1191
AccBSI CCGCTC 1 cut(s) 1172
AccI GTMKAC 1 cut(s) 444
AciI CCGC 3 cut(s) 833, 1060, 1172
AclWI GGATC 3 cut(s) 578, 612, 917
AcsI RAATTY 3 cut(s) 223, 674, 1105
AcuI CTGAAG 2 cut(s) 441, 1047
AfaI GTAC 3 cut(s) 55, 272, 1009
AfiI CCNNNNNNNGG 4 cut(s) 20, 663, 1011, 1191
AgeI ACCGGT 1 cut(s) 50
AgsI TTSAA 3 cut(s) 335, 974, 1147
AjiI CACGTC 1 cut(s) 881
AjnI CCWGG 1 cut(s) 710
AjuI GAANNNNNNNTTGG 2 cut(s) 243, 275
AluBI AGCT 7 cut(s) 43, 205, 299, 539, 652, 814, 980
AluI AGCT 7 cut(s) 43, 205, 299, 539, 652, 814, 980
Alw21I GWGCWC 1 cut(s) 742
Alw26I GTCTC 5 cut(s) 41, 709, 995, 1193, 1203
AlwI GGATC 3 cut(s) 578, 612, 917
Ama87I CYCGRG 1 cut(s) 44
AoxI GGCC 4 cut(s) 263, 285, 1013, 1182
ApeKI GCWGC 3 cut(s) 430, 539, 548
ApoI RAATTY 3 cut(s) 223, 674, 1105
AseI ATTAAT 1 cut(s) 165
AsiGI ACCGGT 1 cut(s) 50
Asp700I GAANNNNTTC 1 cut(s) 567
AspLEI GCGC 2 cut(s) 435, 913
AspS9I GGNCC 3 cut(s) 263, 465, 680
AsuC2I CCSGG 2 cut(s) 498, 1012
AsuHPI GGTGA 2 cut(s) 563, 644
AvaI CYCGRG 1 cut(s) 44
AvaII GGWCC 2 cut(s) 465, 680
BaeGI GKGCMC 2 cut(s) 725, 880
BanI GGYRCC 1 cut(s) 722
BarI GAAGNNNNNNTAC 2 cut(s) 1000, 1032
BbsI GAAGAC 3 cut(s) 107, 323, 1225
Bbv12I GWGCWC 1 cut(s) 742
BbvI GCAGC 3 cut(s) 442, 526, 560
BccI CCATC 1 cut(s) 152
BceAI ACGGC 4 cut(s) 290, 442, 786, 1152
BciT130I CCWGG 1 cut(s) 712
BclI TGATCA 2 cut(s) 319, 816
BcnI CCSGG 2 cut(s) 498, 1012
BcoDI GTCTC 5 cut(s) 41, 709, 995, 1193, 1203
BfaI CTAG 1 cut(s) 1234
BfmI CTRYAG 1 cut(s) 787
BfoI RGCGCY 1 cut(s) 436
BisI GCNGC 3 cut(s) 431, 540, 549
BlsI GCNGC 3 cut(s) 432, 541, 550
Bme1390I CCNGG 3 cut(s) 498, 712, 1012
Bme18I GGWCC 2 cut(s) 465, 680
BmeT110I CYCGRG 1 cut(s) 44
BmgBI CACGTC 1 cut(s) 881
BmgT120I GGNCC 3 cut(s) 263, 465, 680
BmiI GGNNCC 3 cut(s) 466, 507, 724
BmrFI CCNGG 3 cut(s) 498, 712, 1012
BmsI GCATC 1 cut(s) 991
BpiI GAAGAC 3 cut(s) 107, 323, 1225
BpmI CTGGAG 2 cut(s) 830, 1107
BpuEI CTTGAG 1 cut(s) 105
BpuMI CCSGG 2 cut(s) 498, 1012
BsaI GGTCTC 1 cut(s) 41
BsaJI CCNNGG 3 cut(s) 468, 711, 727
BsaWI WCCGGW 1 cut(s) 50
BsaXI ACNNNNNCTCC 2 cut(s) 1040, 1070
Bsc4I CCNNNNNNNGG 4 cut(s) 20, 663, 1011, 1191
Bse118I RCCGGY 1 cut(s) 50
Bse1I ACTGG 3 cut(s) 288, 826, 1005
BseBI CCWGG 1 cut(s) 712
BseDI CCNNGG 3 cut(s) 468, 711, 727
BseGI GGATG 2 cut(s) 534, 1006
BseLI CCNNNNNNNGG 4 cut(s) 20, 663, 1011, 1191
BseMII CTCAG 2 cut(s) 197, 1006
BseNI ACTGG 3 cut(s) 288, 826, 1005
BseSI GKGCMC 2 cut(s) 725, 880
BseXI GCAGC 3 cut(s) 442, 526, 560
BsgI GTGCAG 1 cut(s) 567
Bsh1285I CGRYCG 1 cut(s) 837
BshFI GGCC 4 cut(s) 265, 287, 1015, 1184
BshNI GGYRCC 1 cut(s) 722
BshTI ACCGGT 1 cut(s) 50
BsiEI CGRYCG 1 cut(s) 837
BsiHKAI GWGCWC 1 cut(s) 742
BsiHKCI CYCGRG 1 cut(s) 44
BsiSI CCGG 3 cut(s) 51, 497, 1012
BslI CCNNNNNNNGG 4 cut(s) 20, 663, 1011, 1191
BsmAI GTCTC 5 cut(s) 41, 709, 995, 1193, 1203
BsnI GGCC 4 cut(s) 265, 287, 1015, 1184
Bso31I GGTCTC 1 cut(s) 41
BsoBI CYCGRG 1 cut(s) 44
Bsp1286I GDGCHC 3 cut(s) 725, 742, 880
Bsp1407I TGTACA 1 cut(s) 270
Bsp143I GATC 7 cut(s) 319, 487, 583, 604, 695, 816, 922
Bsp19I CCATGG 1 cut(s) 727
BspACI CCGC 3 cut(s) 833, 1060, 1172
BspANI GGCC 4 cut(s) 265, 287, 1015, 1184
BspCNI CTCAG 2 cut(s) 196, 1005
BspLI GGNNCC 3 cut(s) 466, 507, 724
BspPI GGATC 3 cut(s) 578, 612, 917
BspT107I GGYRCC 1 cut(s) 722
BspTNI GGTCTC 1 cut(s) 41
BsrBI CCGCTC 1 cut(s) 1172
BsrFI RCCGGY 1 cut(s) 50
BsrGI TGTACA 1 cut(s) 270
BsrI ACTGG 3 cut(s) 288, 826, 1005
BssAI RCCGGY 1 cut(s) 50
BssECI CCNNGG 3 cut(s) 468, 711, 727
BssMI GATC 7 cut(s) 319, 487, 583, 604, 695, 816, 922
BssT1I CCWWGG 2 cut(s) 468, 727
Bst2UI CCWGG 1 cut(s) 712
Bst4CI ACNGT 3 cut(s) 416, 737, 791
BstAUI TGTACA 1 cut(s) 270
BstC8I GCNNGC 3 cut(s) 207, 669, 1038
BstDEI CTNAG 3 cut(s) 183, 932, 992
BstDSI CCRYGG 1 cut(s) 727
BstF5I GGATG 2 cut(s) 534, 1006
BstH2I RGCGCY 1 cut(s) 436
BstHHI GCGC 2 cut(s) 435, 913
BstKTI GATC 7 cut(s) 322, 490, 586, 607, 698, 819, 925
BstMAI GTCTC 5 cut(s) 41, 709, 995, 1193, 1203
BstMBI GATC 7 cut(s) 319, 487, 583, 604, 695, 816, 922
BstMCI CGRYCG 1 cut(s) 837
BstMWI GCNNNNNNNGC 5 cut(s) 545, 548, 729, 917, 1068
BstNI CCWGG 1 cut(s) 712
BstNSI RCATGY 2 cut(s) 457, 704
BstSCI CCNGG 3 cut(s) 496, 710, 1010
BstSFI CTRYAG 1 cut(s) 787
BstSLI GKGCMC 2 cut(s) 725, 880
BstV1I GCAGC 3 cut(s) 442, 526, 560
BstV2I GAAGAC 3 cut(s) 107, 323, 1225
BstX2I RGATCY 2 cut(s) 604, 922
BstXI CCANNNNNNTGG 3 cut(s) 516, 559, 718
BstYI RGATCY 2 cut(s) 604, 922
BsuRI GGCC 4 cut(s) 265, 287, 1015, 1184
BtgI CCRYGG 1 cut(s) 727
BtrI CACGTC 1 cut(s) 881
BtsCI GGATG 2 cut(s) 534, 1006
BtsIMutI CAGTG 1 cut(s) 819
Cac8I GCNNGC 3 cut(s) 207, 669, 1038
CfoI GCGC 2 cut(s) 435, 913
Cfr10I RCCGGY 1 cut(s) 50
Cfr13I GGNCC 3 cut(s) 263, 465, 680
CseI GACGC 1 cut(s) 371
Csp6I GTAC 3 cut(s) 54, 271, 1008
CspAI ACCGGT 1 cut(s) 50
CviQI GTAC 3 cut(s) 54, 271, 1008
DdeI CTNAG 3 cut(s) 183, 932, 992
DpnI GATC 7 cut(s) 321, 489, 585, 606, 697, 818, 924
DpnII GATC 7 cut(s) 319, 487, 583, 604, 695, 816, 922
DrdI GACNNNNNNGTC 2 cut(s) 139, 775
DseDI GACNNNNNNGTC 2 cut(s) 139, 775
Eco130I CCWWGG 2 cut(s) 468, 727
Eco31I GGTCTC 1 cut(s) 41
Eco47I GGWCC 2 cut(s) 465, 680
Eco57I CTGAAG 2 cut(s) 441, 1047
Eco88I CYCGRG 1 cut(s) 44
EcoO109I RGGNCCY 1 cut(s) 465
EcoRI GAATTC 1 cut(s) 1105
EcoRII CCWGG 1 cut(s) 710
EcoT14I CCWWGG 2 cut(s) 468, 727
ErhI CCWWGG 2 cut(s) 468, 727
FalI AAGNNNNNCTT 2 cut(s) 1020, 1052
FauI CCCGC 1 cut(s) 1067
FbaI TGATCA 2 cut(s) 319, 816
FblI GTMKAC 1 cut(s) 444
Fnu4HI GCNGC 3 cut(s) 431, 540, 549
FokI GGATG 2 cut(s) 541, 1013
Fsp4HI GCNGC 3 cut(s) 431, 540, 549
FspBI CTAG 1 cut(s) 1234
FspI TGCGCA 1 cut(s) 912
GlaI GCGC 2 cut(s) 434, 912
GluI GCNGC 3 cut(s) 431, 540, 549
GsuI CTGGAG 2 cut(s) 830, 1107
HaeII RGCGCY 1 cut(s) 436
HaeIII GGCC 4 cut(s) 265, 287, 1015, 1184
HapII CCGG 3 cut(s) 51, 497, 1012
HgaI GACGC 1 cut(s) 371
HhaI GCGC 2 cut(s) 435, 913
Hin6I GCGC 2 cut(s) 433, 911
HinP1I GCGC 2 cut(s) 433, 911
HincII GTYRAC 2 cut(s) 768, 1096
HindII GTYRAC 2 cut(s) 768, 1096
HindIII AAGCTT 1 cut(s) 650
HinfI GANTC 3 cut(s) 133, 236, 1154
HpaII CCGG 3 cut(s) 51, 497, 1012
HphI GGTGA 2 cut(s) 563, 644
Hpy166II GTNNAC 4 cut(s) 271, 445, 768, 1096
Hpy188I TCNGA 7 cut(s) 151, 186, 324, 658, 781, 1111, 1159
Hpy188III TCNNGA 8 cut(s) 28, 46, 122, 200, 503, 743, 854, 1124
Hpy8I GTNNAC 4 cut(s) 271, 445, 768, 1096
Hpy99I CGWCG 1 cut(s) 1138
HpyAV CCTTC 5 cut(s) 25, 245, 416, 446, 1026
HpyCH4III ACNGT 3 cut(s) 416, 737, 791
HpyCH4IV ACGT 1 cut(s) 880
HpyCH4V TGCA 6 cut(s) 209, 215, 548, 671, 920, 1178
HpyF10VI GCNNNNNNNGC 5 cut(s) 545, 548, 729, 917, 1068
HpyF3I CTNAG 3 cut(s) 183, 932, 992
HpySE526I ACGT 1 cut(s) 880
HspAI GCGC 2 cut(s) 433, 911
Ksp22I TGATCA 2 cut(s) 319, 816
Kzo9I GATC 7 cut(s) 319, 487, 583, 604, 695, 816, 922
LmnI GCTCC 3 cut(s) 505, 745, 811
Lsp1109I GCAGC 3 cut(s) 442, 526, 560
LweI GCATC 1 cut(s) 991
MaeI CTAG 1 cut(s) 1234
MaeII ACGT 1 cut(s) 880
MaeIII GTNAC 2 cut(s) 130, 410
MalI GATC 7 cut(s) 321, 489, 585, 606, 697, 818, 924
MbiI CCGCTC 1 cut(s) 1172
MboI GATC 7 cut(s) 319, 487, 583, 604, 695, 816, 922
MfeI CAATTG 2 cut(s) 137, 510
MflI RGATCY 2 cut(s) 604, 922
MhlI GDGCHC 3 cut(s) 725, 742, 880
MluCI AATT 8 cut(s) 137, 162, 223, 405, 510, 674, 1045, 1105
MlyI GAGTC 2 cut(s) 127, 1163
MmeI TCCRAC 1 cut(s) 707
MroXI GAANNNNTTC 1 cut(s) 567
MseI TTAA 2 cut(s) 165, 404
MslI CAYNNNNRTG 1 cut(s) 483
MspI CCGG 3 cut(s) 51, 497, 1012
MspR9I CCNGG 3 cut(s) 498, 712, 1012
MunI CAATTG 2 cut(s) 137, 510
MvaI CCWGG 1 cut(s) 712
MwoI GCNNNNNNNGC 5 cut(s) 545, 548, 729, 917, 1068
NciI CCSGG 2 cut(s) 498, 1012
NcoI CCATGG 1 cut(s) 727
NdeII GATC 7 cut(s) 319, 487, 583, 604, 695, 816, 922
NlaIV GGNNCC 3 cut(s) 466, 507, 724
NmuCI GTSAC 1 cut(s) 130
NsbI TGCGCA 1 cut(s) 912
NspI RCATGY 2 cut(s) 457, 704
PaeR7I CTCGAG 1 cut(s) 44
PcsI WCGNNNNNNNCGW 1 cut(s) 78
PdmI GAANNNNTTC 1 cut(s) 567
PfeI GAWTC 1 cut(s) 236
PflMI CCANNNNNTGG 1 cut(s) 1191
PinAI ACCGGT 1 cut(s) 50
PkrI GCNGC 3 cut(s) 432, 541, 550
PleI GAGTC 2 cut(s) 127, 1162
PpsI GAGTC 2 cut(s) 127, 1162
PpuMI RGGWCCY 1 cut(s) 465
PshBI ATTAAT 1 cut(s) 165
Psp5II RGGWCCY 1 cut(s) 465
Psp6I CCWGG 1 cut(s) 710
PspGI CCWGG 1 cut(s) 710
PspN4I GGNNCC 3 cut(s) 466, 507, 724
PspPI GGNCC 3 cut(s) 263, 465, 680
PspPPI RGGWCCY 1 cut(s) 465
PsuI RGATCY 2 cut(s) 604, 922
RsaI GTAC 3 cut(s) 55, 272, 1009
RsaNI GTAC 3 cut(s) 54, 271, 1008
RseI CAYNNNNRTG 1 cut(s) 483
SaqAI TTAA 2 cut(s) 165, 404
SatI GCNGC 3 cut(s) 431, 540, 549
Sau3AI GATC 7 cut(s) 319, 487, 583, 604, 695, 816, 922
Sau96I GGNCC 3 cut(s) 263, 465, 680
SchI GAGTC 2 cut(s) 127, 1163
ScrFI CCNGG 3 cut(s) 498, 712, 1012
SduI GDGCHC 3 cut(s) 725, 742, 880
SfaNI GCATC 1 cut(s) 991
SfcI CTRYAG 1 cut(s) 787
Sfr274I CTCGAG 1 cut(s) 44
SinI GGWCC 2 cut(s) 465, 680
SlaI CTCGAG 1 cut(s) 44
SmiMI CAYNNNNRTG 1 cut(s) 483
SmlI CTYRAG 2 cut(s) 44, 120
SmoI CTYRAG 2 cut(s) 44, 120
Sse9I AATT 8 cut(s) 137, 162, 223, 405, 510, 674, 1045, 1105
SsiI CCGC 3 cut(s) 833, 1060, 1172
SspI AATATT 2 cut(s) 907, 957
SspMI CTAG 1 cut(s) 1234
StyD4I CCNGG 3 cut(s) 496, 710, 1010
StyI CCWWGG 2 cut(s) 468, 727
TaaI ACNGT 3 cut(s) 416, 737, 791
TaiI ACGT 1 cut(s) 883
TaqI TCGA 2 cut(s) 45, 837
TasI AATT 8 cut(s) 137, 162, 223, 405, 510, 674, 1045, 1105
TatI WGTACW 1 cut(s) 270
TfiI GAWTC 1 cut(s) 236
Tru1I TTAA 2 cut(s) 165, 404
Tru9I TTAA 2 cut(s) 165, 404
TscAI CASTG 1 cut(s) 826
TseFI GTSAC 1 cut(s) 130
TseI GCWGC 3 cut(s) 430, 539, 548
Tsp45I GTSAC 1 cut(s) 130
TspDTI ATGAA 4 cut(s) 905, 973, 1058, 1143
TspGWI ACGGA 4 cut(s) 71, 248, 541, 873
TspRI CASTG 1 cut(s) 826
Van91I CCANNNNNTGG 1 cut(s) 1191
VpaK11BI GGWCC 2 cut(s) 465, 680
VspI ATTAAT 1 cut(s) 165
XapI RAATTY 3 cut(s) 223, 674, 1105
XceI RCATGY 2 cut(s) 457, 704
XcmI CCANNNNNNNNNTGG 3 cut(s) 625, 715, 1027
XhoI CTCGAG 1 cut(s) 44
XmiI GTMKAC 1 cut(s) 444
XmnI GAANNNNTTC 1 cut(s) 567
XspI CTAG 1 cut(s) 1234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.