Replication factor C subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g02410 FvH4_7g06980 |
| pyrus_communis | pycom04g03620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 139 |
| AccII | CGCG | 1 cut(s) | 233 |
| AciI | CCGC | 4 cut(s) | 72, 134, 139, 233 |
| AcuI | CTGAAG | 1 cut(s) | 65 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 179 |
| AgsI | TTSAA | 2 cut(s) | 298, 383 |
| AluBI | AGCT | 1 cut(s) | 45 |
| AluI | AGCT | 1 cut(s) | 45 |
| AoxI | GGCC | 1 cut(s) | 167 |
| AspLEI | GCGC | 1 cut(s) | 233 |
| AspS9I | GGNCC | 2 cut(s) | 167, 224 |
| AsuC2I | CCSGG | 2 cut(s) | 25, 174 |
| AsuHPI | GGTGA | 2 cut(s) | 20, 253 |
| AvaII | GGWCC | 1 cut(s) | 224 |
| BbsI | GAAGAC | 1 cut(s) | 68 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 51, 85, 113, 147 |
| BcnI | CCSGG | 2 cut(s) | 25, 174 |
| BglII | AGATCT | 1 cut(s) | 84 |
| Bme1390I | CCNGG | 2 cut(s) | 25, 174 |
| Bme18I | GGWCC | 1 cut(s) | 224 |
| BmgT120I | GGNCC | 2 cut(s) | 167, 224 |
| BmiI | GGNNCC | 2 cut(s) | 178, 226 |
| BmrFI | CCNGG | 2 cut(s) | 25, 174 |
| BmsI | GCATC | 1 cut(s) | 262 |
| BpiI | GAAGAC | 1 cut(s) | 68 |
| BpuMI | CCSGG | 2 cut(s) | 25, 174 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 179 |
| BseGI | GGATG | 1 cut(s) | 403 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 179 |
| BseYI | CCCAGC | 1 cut(s) | 227 |
| Bsh1236I | CGCG | 1 cut(s) | 233 |
| BshFI | GGCC | 1 cut(s) | 169 |
| BsiSI | CCGG | 3 cut(s) | 25, 174, 180 |
| BslFI | GGGAC | 1 cut(s) | 155 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 179 |
| BsmFI | GGGAC | 1 cut(s) | 155 |
| BsnI | GGCC | 1 cut(s) | 169 |
| Bsp143I | GATC | 4 cut(s) | 84, 97, 124, 302 |
| BspACI | CCGC | 4 cut(s) | 72, 134, 139, 233 |
| BspANI | GGCC | 1 cut(s) | 169 |
| BspFNI | CGCG | 1 cut(s) | 233 |
| BspLI | GGNNCC | 2 cut(s) | 178, 226 |
| BsrBI | CCGCTC | 1 cut(s) | 139 |
| BssMI | GATC | 4 cut(s) | 84, 97, 124, 302 |
| BstF5I | GGATG | 1 cut(s) | 403 |
| BstFNI | CGCG | 1 cut(s) | 233 |
| BstHHI | GCGC | 1 cut(s) | 233 |
| BstKTI | GATC | 4 cut(s) | 87, 100, 127, 305 |
| BstMBI | GATC | 4 cut(s) | 84, 97, 124, 302 |
| BstSCI | CCNGG | 2 cut(s) | 23, 172 |
| BstUI | CGCG | 1 cut(s) | 233 |
| BstV2I | GAAGAC | 1 cut(s) | 68 |
| BstX2I | RGATCY | 1 cut(s) | 84 |
| BstYI | RGATCY | 1 cut(s) | 84 |
| BsuRI | GGCC | 1 cut(s) | 169 |
| BtgZI | GCGATG | 1 cut(s) | 184 |
| BtsCI | GGATG | 1 cut(s) | 403 |
| CfoI | GCGC | 1 cut(s) | 233 |
| Cfr13I | GGNCC | 2 cut(s) | 167, 224 |
| CviAII | CATG | 4 cut(s) | 261, 370, 409, 432 |
| CviJI | RGCY | 3 cut(s) | 45, 169, 177 |
| CviKI_1 | RGCY | 3 cut(s) | 45, 169, 177 |
| DpnI | GATC | 4 cut(s) | 86, 99, 126, 304 |
| DpnII | GATC | 4 cut(s) | 84, 97, 124, 302 |
| Eco32I | GATATC | 1 cut(s) | 358 |
| Eco47I | GGWCC | 1 cut(s) | 224 |
| Eco57I | CTGAAG | 1 cut(s) | 65 |
| EcoRV | GATATC | 1 cut(s) | 358 |
| FaeI | CATG | 4 cut(s) | 264, 373, 412, 435 |
| FaiI | YATR | 5 cut(s) | 262, 371, 410, 417, 433 |
| FaqI | GGGAC | 1 cut(s) | 155 |
| FatI | CATG | 4 cut(s) | 260, 369, 408, 431 |
| FauI | CCCGC | 1 cut(s) | 132 |
| FokI | GGATG | 1 cut(s) | 410 |
| GlaI | GCGC | 1 cut(s) | 232 |
| GsaI | CCCAGC | 1 cut(s) | 231 |
| HaeIII | GGCC | 1 cut(s) | 169 |
| HapII | CCGG | 3 cut(s) | 25, 174, 180 |
| HhaI | GCGC | 1 cut(s) | 233 |
| Hin1II | CATG | 4 cut(s) | 264, 373, 412, 435 |
| Hin6I | GCGC | 1 cut(s) | 231 |
| HinP1I | GCGC | 1 cut(s) | 231 |
| HindIII | AAGCTT | 1 cut(s) | 43 |
| HinfI | GANTC | 1 cut(s) | 105 |
| HpaII | CCGG | 3 cut(s) | 25, 174, 180 |
| HphI | GGTGA | 2 cut(s) | 20, 253 |
| Hpy188I | TCNGA | 3 cut(s) | 84, 97, 216 |
| Hpy188III | TCNNGA | 2 cut(s) | 280, 298 |
| HpyAV | CCTTC | 1 cut(s) | 238 |
| HpyCH4V | TGCA | 1 cut(s) | 423 |
| Hsp92II | CATG | 4 cut(s) | 264, 373, 412, 435 |
| HspAI | GCGC | 1 cut(s) | 231 |
| Kzo9I | GATC | 4 cut(s) | 84, 97, 124, 302 |
| LmnI | GCTCC | 2 cut(s) | 136, 182 |
| LpnPI | CCDG | 6 cut(s) | 38, 113, 187, 193, 241, 265 |
| LweI | GCATC | 1 cut(s) | 262 |
| MalI | GATC | 4 cut(s) | 86, 99, 126, 304 |
| MbiI | CCGCTC | 1 cut(s) | 139 |
| MboI | GATC | 4 cut(s) | 84, 97, 124, 302 |
| MboII | GAAGA | 2 cut(s) | 68, 71 |
| MflI | RGATCY | 1 cut(s) | 84 |
| MluCI | AATT | 1 cut(s) | 314 |
| MlyI | GAGTC | 1 cut(s) | 99 |
| MmeI | TCCRAC | 1 cut(s) | 375 |
| MnlI | CCTC | 3 cut(s) | 4, 69, 180 |
| MseI | TTAA | 1 cut(s) | 308 |
| MspI | CCGG | 3 cut(s) | 25, 174, 180 |
| MspR9I | CCNGG | 2 cut(s) | 25, 174 |
| MvnI | CGCG | 1 cut(s) | 233 |
| NciI | CCSGG | 2 cut(s) | 25, 174 |
| NdeII | GATC | 4 cut(s) | 84, 97, 124, 302 |
| NlaIII | CATG | 4 cut(s) | 264, 373, 412, 435 |
| NlaIV | GGNNCC | 2 cut(s) | 178, 226 |
| PleI | GAGTC | 1 cut(s) | 99 |
| PpsI | GAGTC | 1 cut(s) | 99 |
| PspFI | CCCAGC | 1 cut(s) | 227 |
| PspN4I | GGNNCC | 2 cut(s) | 178, 226 |
| PspPI | GGNCC | 2 cut(s) | 167, 224 |
| PsuI | RGATCY | 1 cut(s) | 84 |
| SaqAI | TTAA | 1 cut(s) | 308 |
| Sau3AI | GATC | 4 cut(s) | 84, 97, 124, 302 |
| Sau96I | GGNCC | 2 cut(s) | 167, 224 |
| SchI | GAGTC | 1 cut(s) | 99 |
| ScrFI | CCNGG | 2 cut(s) | 25, 174 |
| SetI | ASST | 4 cut(s) | 10, 47, 243, 249 |
| SfaNI | GCATC | 1 cut(s) | 262 |
| SinI | GGWCC | 1 cut(s) | 224 |
| Sse9I | AATT | 1 cut(s) | 314 |
| SsiI | CCGC | 4 cut(s) | 72, 134, 139, 233 |
| StyD4I | CCNGG | 2 cut(s) | 23, 172 |
| TaqI | TCGA | 1 cut(s) | 61 |
| TasI | AATT | 1 cut(s) | 314 |
| Tru1I | TTAA | 1 cut(s) | 308 |
| Tru9I | TTAA | 1 cut(s) | 308 |
| VpaK11BI | GGWCC | 1 cut(s) | 224 |