Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0008264

Physical Location & Seq

Genomic Coordinates Reverse (-)

11415533 .. 11420700

Gene Structure 5168 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g12620.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGGCGGTGAAGCGCGGGCTCCACCGGAACCGAGCCGCCGGATCTCGATTCCCTATCGCGGTTTTCATATTCGTTCTCTTCCTCGTTCCGTTGATTTTCTTCGTCGGCCGTGGCCTCTACACCTCTGATAAAAATGATTATATATCTGGTCCTGGTGAAAAGACTTTGGATTGGAGGGAGCGAGTGGTGCTGCAACATGCCAAATCTCTTTTTTCGAAAGAGGTCATTGATGTGATTGCAGCCAGCACAAATGACATGGGACCTTTGAGCCTTGATTTCTTCCGGAAAAACAATTTGTCAGCTTCGTGGAAAGTCATTGGGGAAATGACATCGTCTGTAACAGATCCAAAGATAAATTTGACAGCCGTAGATGCAAAACAAGAGACATCTAGGGCTGAAGTGGATGATGCTTCAGATAATCATGCTCAACCTCTTGATGCATCAAAACTAGCCCGAAGGCAACTAAGAGAGGCTAAACGTGCCAGCCGTGCAACTGAGTTGACACGACACGATGATGAATCAATTGTAAAACTTGAAAGTGCAGCCATTGAACGCTCCAAATCAGTTGACTCAGCTGTTCTCGGAAAATACAGCATTTGGAGGAAAGAAAACGAGAATGAAAACTCCGACTCAACAGTGCGCTTGATGCGTGACCAAATCATAATGGCAAGGGTTTACTTAAGTATTGCGAAGATGAAGAACAAGCCTGATCTATATGAACAACTACAGATTCGATTGAGAGAATCTCAGCGTGCATTGGGAGAGGCAACTGCTGATGCAGATTTACCCAAAAGTGCACCGGAGAGAATAAAAGCTATGGGCCAAGTTCTTTCAAAGTCGAGAGAGCAACTGTATGATTGTAATCTGGTCACTGGCAAGCTGAGAGCAATGCTTCAGTCTGCAGATGAACAAGTGCGTAGCTTGAAAAAGCAGAGCACATTCCTTAGTCAGTTAGCTGCCAAGACCATTCCAAATGGAATACACTGCTTGTCTATGCGCCTAACTATAGATTATTATCTCCTTCCTATGGAAAAGAGAAAATTTCCTAGAAGTGAGAACTTGGAAAATCCTAGCCTTTATCATTATGCTCTCTTCTCTGACAACGTCTTGGCTGCATCGGTCGTCGTCAACTCTACTGTCAAGAATGCCAAGGATCCTTCAAAACATGTATTCCATCTTGTTACTGATAAGCTTAACTTTGGAGCCATGAATATGTGGTTCTTATTGAATCCTCCTGGAAAAGCCACAATTCATGTTGAAAATGTTGATGAGTTTAAGTGGCTTAACTCATCGTACTGCCCAGTTCTGCGGCAACTTGAGTCTGCTGCAATGAAAAACTATTATTTCAAGGCTGACCATCCCACCACTCTCTCATCTGGCGCTTCTAATCTGAAGTACCGTAACCCGAAGTATCTCTCAATGCTTAATCATTTGAGGTTCTATCTTCCACAGGTCTATCCCAAGTTGAATAAGATTTTGTTTCTGGATGATGACATTGTTGTCCAGAAAGACTTAACTGGATTGTGGGCAGTGGATCTACATGGAAAAGTCAATGGTGCAGTAGAAACCTGTGGTGAGAGCTTCCATCGTTTTGATAAGTACCTAAACTTTTCAAATCCCCATATTGCAAGAAACTTTGATCCAAATGCATGTGGATGGGCATATGGAATGAACATGTTTGATTTGAAGGAGTGGAAAAAGAAAGATATAACCGGTATCTATCACAAGTGGCAGAACATGAATGAAGAGAGGACACTGTGGAAACTTGGAACACTCCCTCCAGGGCTAATCACATTTTATGGGCTGACACATCCACTACAAAAGTCATGGCATGTGCTTGGTTTGGGATACAATCCAAGTCTGGATAGGAATGAGATTGAGAATGCAGCTGTCGTACACTATAATGGTAATATGAAACCATGGCTGGAGTTGGCGATGACAAAGTACCGAGCATATTGGACAAAGTACATCAAGTATGACCATCCCTATCTCCGCAGTTGCAAGCTAAGTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009664 GO:0009832 GO:0009987 GO:0010289 GO:0010383 GO:0010393 GO:0010394 GO:0012505 GO:0016043 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0017144 GO:0031410 GO:0031982 GO:0031984 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0045488 GO:0045489 GO:0047262 GO:0052325 GO:0052546 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0097708 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00520 map00520

Pfam Domains

Protein Families

Glyco_transf_8

Protein Analysis

672

Amino Acids

76.78

Weight (kDa)

9.31

Isoelectric Point (pI)

33.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GAUT_1	PF25557	209 - 285	3.2e-34	Galacturonosyltransferase domain 1
Glyco_transf_8	PF01501	329 - 644	2.8e-85	Glycosyl transferase family 8

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008264)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61130
fragaria_vesca	FvH4_7g12620 FvH4_7g12620 FvH4_7g12620 FvH4_7g12620 FvH4_7g12620
malus_domestica	MD00G1136600.v1.1 MD02G1197800.v1.1
prunus_persica	Prupe.2G150800_v2.0.a1 Prupe.2G150800_v2.0.a1
pyrus_communis	pycom02g16150 pycom07g11590
rosa_chinensis	RchiOBHm_Chr1g0351641
rosa_laevigata	RLG00000028393
rosa_multiflora	Rmu_sc0001144.1_g000007
rosa_roxburghii	Rroxscaffold_4G00303640
rosa_rugosa	Rorug01G0219600 Rorug01G0219700
rosa_samantha	Rh1AG234300 Rh1BG204900 Rh1CG218900 Rh1DG231900
rosa_wichuraiana	Rw1G020400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1499
AccII	CGCG	2 cut(s)	15, 59
AccIII	TCCGGA	1 cut(s)	282
AciI	CCGC	6 cut(s)	5, 15, 36, 59, 1309, 1993
AclWI	GGATC	6 cut(s)	49, 338, 1148, 1161, 1542, 1634
AcoI	YGGCCR	1 cut(s)	106
AcsI	RAATTY	2 cut(s)	355, 1040
AcuI	CTGAAG	4 cut(s)	396, 417, 878, 1412
AfaI	GTAC	6 cut(s)	1295, 1397, 1601, 1896, 1946, 1967
AfiI	CCNNNNNNNGG	2 cut(s)	58, 1027
AflII	CTTAAG	1 cut(s)	679
AflIII	ACRYGT	2 cut(s)	1165, 1674
AgeI	ACCGGT	1 cut(s)	1712
AjnI	CCWGG	3 cut(s)	151, 1234, 1780
AloI	GAACNNNNNNTCC	2 cut(s)	1762, 1794
Alw21I	GWGCWC	2 cut(s)	799, 938
Alw26I	GTCTC	1 cut(s)	377
Alw44I	GTGCAC	1 cut(s)	795
AlwI	GGATC	6 cut(s)	49, 338, 1148, 1161, 1542, 1634
Aor13HI	TCCGGA	1 cut(s)	282
AoxI	GGCC	3 cut(s)	106, 112, 820
ApaLI	GTGCAC	1 cut(s)	795
ApeKI	GCWGC	7 cut(s)	190, 239, 542, 956, 1112, 1325, 1886
ApoI	RAATTY	2 cut(s)	355, 1040
AsiGI	ACCGGT	1 cut(s)	1712
AspLEI	GCGC	4 cut(s)	15, 642, 999, 1382
AspS9I	GGNCC	3 cut(s)	149, 260, 820
AsuHPI	GGTGA	3 cut(s)	19, 167, 1586
AsuII	TTCGAA	1 cut(s)	215
AvaII	GGWCC	2 cut(s)	149, 260
BaeGI	GKGCMC	1 cut(s)	799
BamHI	GGATCC	1 cut(s)	1153
BanII	GRGCYC	1 cut(s)	21
Bbv12I	GWGCWC	2 cut(s)	799, 938
BbvI	GCAGC	7 cut(s)	177, 251, 554, 943, 1099, 1312, 1898
BccI	CCATC	5 cut(s)	1182, 1365, 1593, 1650, 1989
BceAI	ACGGC	3 cut(s)	93, 350, 471
BciT130I	CCWGG	3 cut(s)	153, 1236, 1782
BciVI	GTATCC	1 cut(s)	1841
BcoDI	GTCTC	1 cut(s)	377
BfaI	CTAG	4 cut(s)	390, 449, 1047, 1071
BfmI	CTRYAG	3 cut(s)	725, 900, 1005
BfoI	RGCGCY	1 cut(s)	1383
BfrI	CTTAAG	1 cut(s)	679
BfuI	GTATCC	1 cut(s)	1841
BisI	GCNGC	9 cut(s)	36, 191, 240, 543, 957, 1113, 1310, 1326, 1887
BlsI	GCNGC	9 cut(s)	37, 192, 241, 544, 958, 1114, 1311, 1327, 1888
Bme1390I	CCNGG	3 cut(s)	153, 1236, 1782
Bme18I	GGWCC	2 cut(s)	149, 260
BmgT120I	GGNCC	3 cut(s)	149, 260, 820
BmiI	GGNNCC	5 cut(s)	20, 29, 261, 1155, 1204
BmrFI	CCNGG	3 cut(s)	153, 1236, 1782
BmrI	ACTGGG	1 cut(s)	1295
BmsI	GCATC	7 cut(s)	361, 397, 427, 449, 636, 766, 1124
BmuI	ACTGGG	1 cut(s)	1295
BplI	GAGNNNNNCTC	2 cut(s)	730, 762
BpmI	CTGGAG	2 cut(s)	1764, 1946
Bpu14I	TTCGAA	1 cut(s)	215
BpuEI	CTTGAG	1 cut(s)	1337
BsaBI	GATNNNNATC	2 cut(s)	861, 1014
BsaJI	CCNNGG	4 cut(s)	109, 1149, 1781, 1919
BsaWI	WCCGGW	4 cut(s)	24, 282, 799, 1712
BsaXI	ACNNNNNCTCC	2 cut(s)	1762, 1792
Bsc4I	CCNNNNNNNGG	2 cut(s)	58, 1027
Bse118I	RCCGGY	1 cut(s)	1712
Bse1I	ACTGG	3 cut(s)	877, 1301, 1522
Bse3DI	GCAATG	2 cut(s)	894, 1335
Bse8I	GATNNNNATC	2 cut(s)	861, 1014
BseAI	TCCGGA	1 cut(s)	282
BseBI	CCWGG	3 cut(s)	153, 1236, 1782
BseDI	CCNNGG	4 cut(s)	109, 1149, 1781, 1919
BseGI	GGATG	6 cut(s)	409, 1357, 1492, 1661, 1810, 1981
BseJI	GATNNNNATC	2 cut(s)	861, 1014
BseLI	CCNNNNNNNGG	2 cut(s)	58, 1027
BseMI	GCAATG	2 cut(s)	894, 1335
BseMII	CTCAG	4 cut(s)	486, 585, 761, 872
BseNI	ACTGG	3 cut(s)	877, 1301, 1522
BseSI	GKGCMC	1 cut(s)	799
BseX3I	CGGCCG	1 cut(s)	106
BseXI	GCAGC	7 cut(s)	177, 251, 554, 943, 1099, 1312, 1898
BsgI	GTGCAG	2 cut(s)	561, 1578
Bsh1236I	CGCG	2 cut(s)	15, 59
Bsh1285I	CGRYCG	2 cut(s)	109, 1122
BshFI	GGCC	3 cut(s)	108, 114, 822
BshTI	ACCGGT	1 cut(s)	1712
BsiEI	CGRYCG	2 cut(s)	109, 1122
BsiHKAI	GWGCWC	2 cut(s)	799, 938
BsiSI	CCGG	5 cut(s)	25, 39, 283, 800, 1713
BslFI	GGGAC	1 cut(s)	273
BslI	CCNNNNNNNGG	2 cut(s)	58, 1027
BsmAI	GTCTC	1 cut(s)	377
BsmFI	GGGAC	1 cut(s)	273
BsmI	GAATGC	2 cut(s)	1150, 1888
BsnI	GGCC	3 cut(s)	108, 114, 822
Bsp119I	TTCGAA	1 cut(s)	215
Bsp1286I	GDGCHC	3 cut(s)	21, 799, 938
Bsp13I	TCCGGA	1 cut(s)	282
Bsp143I	GATC	6 cut(s)	41, 343, 709, 1153, 1534, 1639
Bsp19I	CCATGG	1 cut(s)	1919
BspACI	CCGC	6 cut(s)	5, 15, 36, 59, 1309, 1993
BspANI	GGCC	3 cut(s)	108, 114, 822
BspCNI	CTCAG	4 cut(s)	487, 584, 760, 873
BspEI	TCCGGA	1 cut(s)	282
BspFNI	CGCG	2 cut(s)	15, 59
BspLI	GGNNCC	5 cut(s)	20, 29, 261, 1155, 1204
BspMAI	CTGCAG	1 cut(s)	904
BspPI	GGATC	6 cut(s)	49, 338, 1148, 1161, 1542, 1634
BspT104I	TTCGAA	1 cut(s)	215
BspTI	CTTAAG	1 cut(s)	679
BsrDI	GCAATG	2 cut(s)	894, 1335
BsrFI	RCCGGY	1 cut(s)	1712
BsrI	ACTGG	3 cut(s)	877, 1301, 1522
BssAI	RCCGGY	1 cut(s)	1712
BssECI	CCNNGG	4 cut(s)	109, 1149, 1781, 1919
BssMI	GATC	6 cut(s)	41, 343, 709, 1153, 1534, 1639
BssT1I	CCWWGG	2 cut(s)	1149, 1919
Bst2UI	CCWGG	3 cut(s)	153, 1236, 1782
Bst4CI	ACNGT	5 cut(s)	637, 852, 1138, 1400, 1758
Bst6I	CTCTTC	3 cut(s)	83, 1097, 1740
BstAFI	CTTAAG	1 cut(s)	679
BstBI	TTCGAA	1 cut(s)	215
BstC8I	GCNNGC	6 cut(s)	17, 244, 484, 753, 878, 2003
BstDEI	CTNAG	7 cut(s)	464, 495, 571, 747, 881, 944, 2006
BstDSI	CCRYGG	2 cut(s)	109, 1919
BstF5I	GGATG	6 cut(s)	409, 1357, 1492, 1661, 1810, 1981
BstFNI	CGCG	2 cut(s)	15, 59
BstH2I	RGCGCY	1 cut(s)	1383
BstHHI	GCGC	4 cut(s)	15, 642, 999, 1382
BstKTI	GATC	6 cut(s)	44, 346, 712, 1156, 1537, 1642
BstMAI	GTCTC	1 cut(s)	377
BstMBI	GATC	6 cut(s)	41, 343, 709, 1153, 1534, 1639
BstMCI	CGRYCG	2 cut(s)	109, 1122
BstMWI	GCNNNNNNNGC	5 cut(s)	187, 371, 479, 488, 646
BstNI	CCWGG	3 cut(s)	153, 1236, 1782
BstNSI	RCATGY	5 cut(s)	200, 1169, 1653, 1678, 1835
BstSCI	CCNGG	3 cut(s)	151, 1234, 1780
BstSFI	CTRYAG	3 cut(s)	725, 900, 1005
BstSLI	GKGCMC	1 cut(s)	799
BstUI	CGCG	2 cut(s)	15, 59
BstV1I	GCAGC	7 cut(s)	177, 251, 554, 943, 1099, 1312, 1898
BstX2I	RGATCY	4 cut(s)	41, 343, 1153, 1534
BstYI	RGATCY	4 cut(s)	41, 343, 1153, 1534
BstZI	CGGCCG	1 cut(s)	106
BsuI	GTATCC	1 cut(s)	1841
BsuRI	GGCC	3 cut(s)	108, 114, 822
BtgI	CCRYGG	2 cut(s)	109, 1919
BtgZI	GCGATG	1 cut(s)	1949
BtsCI	GGATG	6 cut(s)	409, 1357, 1492, 1661, 1810, 1981
BtsI	GCAGTG	2 cut(s)	982, 1536
BtsIMutI	CAGTG	5 cut(s)	642, 870, 982, 1536, 1754
Cac8I	GCNNGC	6 cut(s)	17, 244, 484, 753, 878, 2003
CfoI	GCGC	4 cut(s)	15, 642, 999, 1382
Cfr10I	RCCGGY	1 cut(s)	1712
Cfr13I	GGNCC	3 cut(s)	149, 260, 820
Csp6I	GTAC	6 cut(s)	1294, 1396, 1600, 1895, 1945, 1966
CspAI	ACCGGT	1 cut(s)	1712
CviQI	GTAC	6 cut(s)	1294, 1396, 1600, 1895, 1945, 1966
DdeI	CTNAG	7 cut(s)	464, 495, 571, 747, 881, 944, 2006
DpnI	GATC	6 cut(s)	43, 345, 711, 1155, 1536, 1641
DpnII	GATC	6 cut(s)	41, 343, 709, 1153, 1534, 1639
DrdI	GACNNNNNNGTC	1 cut(s)	1499
DseDI	GACNNNNNNGTC	1 cut(s)	1499
EaeI	YGGCCR	1 cut(s)	106
EagI	CGGCCG	1 cut(s)	106
Eam1104I	CTCTTC	3 cut(s)	83, 1097, 1740
EarI	CTCTTC	3 cut(s)	83, 1097, 1740
EclXI	CGGCCG	1 cut(s)	106
Eco130I	CCWWGG	2 cut(s)	1149, 1919
Eco24I	GRGCYC	1 cut(s)	21
Eco47I	GGWCC	2 cut(s)	149, 260
Eco52I	CGGCCG	1 cut(s)	106
Eco57I	CTGAAG	4 cut(s)	396, 417, 878, 1412
EcoO109I	RGGNCCY	1 cut(s)	260
EcoRII	CCWGG	3 cut(s)	151, 1234, 1780
EcoT14I	CCWWGG	2 cut(s)	1149, 1919
EcoT22I	ATGCAT	2 cut(s)	442, 1651
EcoT38I	GRGCYC	1 cut(s)	21
ErhI	CCWWGG	2 cut(s)	1149, 1919
FalI	AAGNNNNNCTT	2 cut(s)	1181, 1213
FaqI	GGGAC	1 cut(s)	273
FauI	CCCGC	1 cut(s)	8
FauNDI	CATATG	1 cut(s)	1663
Fnu4HI	GCNGC	9 cut(s)	36, 191, 240, 543, 957, 1113, 1310, 1326, 1887
FokI	GGATG	6 cut(s)	416, 1344, 1499, 1668, 1797, 1968
FriOI	GRGCYC	1 cut(s)	21
Fsp4HI	GCNGC	9 cut(s)	36, 191, 240, 543, 957, 1113, 1310, 1326, 1887
FspBI	CTAG	4 cut(s)	390, 449, 1047, 1071
GlaI	GCGC	4 cut(s)	14, 641, 998, 1381
GluI	GCNGC	9 cut(s)	36, 191, 240, 543, 957, 1113, 1310, 1326, 1887
GsuI	CTGGAG	2 cut(s)	1764, 1946
HaeII	RGCGCY	1 cut(s)	1383
HaeIII	GGCC	3 cut(s)	108, 114, 822
HapII	CCGG	5 cut(s)	25, 39, 283, 800, 1713
HhaI	GCGC	4 cut(s)	15, 642, 999, 1382
Hin6I	GCGC	4 cut(s)	13, 640, 997, 1380
HinP1I	GCGC	4 cut(s)	13, 640, 997, 1380
HincII	GTYRAC	3 cut(s)	501, 568, 1129
HindII	GTYRAC	3 cut(s)	501, 568, 1129
HindIII	AAGCTT	1 cut(s)	1190
HinfI	GANTC	8 cut(s)	48, 518, 569, 629, 730, 743, 1228, 1319
HpaII	CCGG	5 cut(s)	25, 39, 283, 800, 1713
HphI	GGTGA	3 cut(s)	19, 167, 1586
Hpy166II	GTNNAC	6 cut(s)	501, 568, 676, 797, 1129, 1897
Hpy188I	TCNGA	6 cut(s)	127, 415, 584, 628, 1099, 1392
Hpy188III	TCNNGA	8 cut(s)	45, 283, 434, 840, 1141, 1484, 1504, 1862
Hpy8I	GTNNAC	6 cut(s)	501, 568, 676, 797, 1129, 1897
Hpy99I	CGWCG	2 cut(s)	107, 1127
HpyAV	CCTTC	4 cut(s)	450, 1031, 1167, 1681
HpyCH4III	ACNGT	5 cut(s)	637, 852, 1138, 1400, 1758
HpyCH4IV	ACGT	2 cut(s)	478, 1104
HpyF10VI	GCNNNNNNNGC	5 cut(s)	187, 371, 479, 488, 646
HpyF3I	CTNAG	7 cut(s)	464, 495, 571, 747, 881, 944, 2006
HpySE526I	ACGT	2 cut(s)	478, 1104
HspAI	GCGC	4 cut(s)	13, 640, 997, 1380
Kpn2I	TCCGGA	1 cut(s)	282
Kzo9I	GATC	6 cut(s)	41, 343, 709, 1153, 1534, 1639
LmnI	GCTCC	4 cut(s)	24, 178, 560, 1202
Lsp1109I	GCAGC	7 cut(s)	177, 251, 554, 943, 1099, 1312, 1898
LweI	GCATC	7 cut(s)	361, 397, 427, 449, 636, 766, 1124
MaeI	CTAG	4 cut(s)	390, 449, 1047, 1071
MaeII	ACGT	2 cut(s)	478, 1104
MaeIII	GTNAC	5 cut(s)	337, 650, 868, 1180, 1400
MalI	GATC	6 cut(s)	43, 345, 711, 1155, 1536, 1641
MboI	GATC	6 cut(s)	41, 343, 709, 1153, 1534, 1639
MboII	GAAGA	8 cut(s)	70, 91, 271, 703, 709, 1084, 1436, 1757
MfeI	CAATTG	1 cut(s)	522
MflI	RGATCY	4 cut(s)	41, 343, 1153, 1534
MhlI	GDGCHC	3 cut(s)	21, 799, 938
MluCI	AATT	5 cut(s)	292, 355, 522, 1040, 1248
MlyI	GAGTC	3 cut(s)	563, 623, 1328
MmeI	TCCRAC	1 cut(s)	651
Mph1103I	ATGCAT	2 cut(s)	442, 1651
MroI	TCCGGA	1 cut(s)	282
MseI	TTAA	6 cut(s)	680, 1194, 1275, 1284, 1425, 1514
MslI	CAYNNNNRTG	5 cut(s)	230, 513, 1211, 1654, 1902
MspA1I	CMGCKG	2 cut(s)	575, 1889
MspCI	CTTAAG	1 cut(s)	679
MspI	CCGG	5 cut(s)	25, 39, 283, 800, 1713
MspR9I	CCNGG	3 cut(s)	153, 1236, 1782
MunI	CAATTG	1 cut(s)	522
Mva1269I	GAATGC	2 cut(s)	1150, 1888
MvaI	CCWGG	3 cut(s)	153, 1236, 1782
MvnI	CGCG	2 cut(s)	15, 59
MwoI	GCNNNNNNNGC	5 cut(s)	187, 371, 479, 488, 646
NcoI	CCATGG	1 cut(s)	1919
NdeI	CATATG	1 cut(s)	1663
NdeII	GATC	6 cut(s)	41, 343, 709, 1153, 1534, 1639
NlaIV	GGNNCC	5 cut(s)	20, 29, 261, 1155, 1204
NmuCI	GTSAC	2 cut(s)	650, 868
NsiI	ATGCAT	2 cut(s)	442, 1651
NspI	RCATGY	5 cut(s)	200, 1169, 1653, 1678, 1835
NspV	TTCGAA	1 cut(s)	215
PciI	ACATGT	2 cut(s)	1165, 1674
PcsI	WCGNNNNNNNCGW	1 cut(s)	484
PctI	GAATGC	2 cut(s)	1150, 1888
PfeI	GAWTC	5 cut(s)	48, 518, 730, 743, 1228
PflFI	GACNNNGTC	2 cut(s)	331, 1103
PfoI	TCCNGGA	1 cut(s)	1234
PinAI	ACCGGT	1 cut(s)	1712
PkrI	GCNGC	9 cut(s)	37, 192, 241, 544, 958, 1114, 1311, 1327, 1888
PleI	GAGTC	3 cut(s)	563, 623, 1327
PpsI	GAGTC	3 cut(s)	563, 623, 1327
PpuMI	RGGWCCY	1 cut(s)	260
PscI	ACATGT	2 cut(s)	1165, 1674
Psp5II	RGGWCCY	1 cut(s)	260
Psp6I	CCWGG	3 cut(s)	151, 1234, 1780
PspGI	CCWGG	3 cut(s)	151, 1234, 1780
PspN4I	GGNNCC	5 cut(s)	20, 29, 261, 1155, 1204
PspPI	GGNCC	3 cut(s)	149, 260, 820
PspPPI	RGGWCCY	1 cut(s)	260
PstI	CTGCAG	1 cut(s)	904
PsuI	RGATCY	4 cut(s)	41, 343, 1153, 1534
PsyI	GACNNNGTC	2 cut(s)	331, 1103
PvuII	CAGCTG	2 cut(s)	575, 1889
RsaI	GTAC	6 cut(s)	1295, 1397, 1601, 1896, 1946, 1967
RsaNI	GTAC	6 cut(s)	1294, 1396, 1600, 1895, 1945, 1966
RseI	CAYNNNNRTG	5 cut(s)	230, 513, 1211, 1654, 1902
SaqAI	TTAA	6 cut(s)	680, 1194, 1275, 1284, 1425, 1514
SatI	GCNGC	9 cut(s)	36, 191, 240, 543, 957, 1113, 1310, 1326, 1887
Sau3AI	GATC	6 cut(s)	41, 343, 709, 1153, 1534, 1639
Sau96I	GGNCC	3 cut(s)	149, 260, 820
SchI	GAGTC	3 cut(s)	563, 623, 1328
ScrFI	CCNGG	3 cut(s)	153, 1236, 1782
SduI	GDGCHC	3 cut(s)	21, 799, 938
SfaNI	GCATC	7 cut(s)	361, 397, 427, 449, 636, 766, 1124
SfcI	CTRYAG	3 cut(s)	725, 900, 1005
SfuI	TTCGAA	1 cut(s)	215
SinI	GGWCC	2 cut(s)	149, 260
SmiMI	CAYNNNNRTG	5 cut(s)	230, 513, 1211, 1654, 1902
SmlI	CTYRAG	2 cut(s)	679, 1316
SmoI	CTYRAG	2 cut(s)	679, 1316
Sse9I	AATT	5 cut(s)	292, 355, 522, 1040, 1248
SsiI	CCGC	6 cut(s)	5, 15, 36, 59, 1309, 1993
SspMI	CTAG	4 cut(s)	390, 449, 1047, 1071
StyD4I	CCNGG	3 cut(s)	151, 1234, 1780
StyI	CCWWGG	2 cut(s)	1149, 1919
TaaI	ACNGT	5 cut(s)	637, 852, 1138, 1400, 1758
TaiI	ACGT	2 cut(s)	481, 1107
TaqI	TCGA	4 cut(s)	46, 215, 733, 839
TaqII	GACCGA	1 cut(s)	1108
TasI	AATT	5 cut(s)	292, 355, 522, 1040, 1248
TatI	WGTACW	1 cut(s)	1965
TauI	GCSGC	2 cut(s)	38, 1312
TfiI	GAWTC	5 cut(s)	48, 518, 730, 743, 1228
Tru1I	TTAA	6 cut(s)	680, 1194, 1275, 1284, 1425, 1514
Tru9I	TTAA	6 cut(s)	680, 1194, 1275, 1284, 1425, 1514
TscAI	CASTG	5 cut(s)	642, 877, 989, 1536, 1761
TseFI	GTSAC	2 cut(s)	650, 868
TseI	GCWGC	7 cut(s)	190, 239, 542, 956, 1112, 1325, 1886
Tsp45I	GTSAC	2 cut(s)	650, 868
TspGWI	ACGGA	1 cut(s)	78
TspRI	CASTG	5 cut(s)	642, 877, 989, 1536, 1761
Tth111I	GACNNNGTC	2 cut(s)	331, 1103
Vha464I	CTTAAG	1 cut(s)	679
VneI	GTGCAC	1 cut(s)	795
VpaK11BI	GGWCC	2 cut(s)	149, 260
XapI	RAATTY	2 cut(s)	355, 1040
XceI	RCATGY	5 cut(s)	200, 1169, 1653, 1678, 1835
XspI	CTAG	4 cut(s)	390, 449, 1047, 1071
Zsp2I	ATGCAT	2 cut(s)	442, 1651

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.