Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0008264

Physical Location & Seq

Genomic Coordinates Forward (+)

31384897 .. 31393360

Gene Structure 8464 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0219700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGCCTGGTGAAGCCTCCTTTTCCAATTCTCGTCCTTGTCGATTTAGCTACGATGTCTTCCTCAGTTTCAGAGGCGAAGACACCCGCAAGACTTTCACCGACCACCTTTACACGGCCCTGGTCAACGCCAGAATCCGCACTTTCCGAGACGATGACGAAATTGAGAGAGGACAAGATATCAAGCCGGAGCTAAACAAAGCCATCCATCAATCACGGAGCTCCATCGTCGTCTTTTCCAAAGACTACGCCTCTTCCCAATGGCGCCTCCACCACAACACATTAGTGCTCCTCCAACGCCACGCCGACGACCCTCGTGGTTATGTCATTTTGTCGGTGTTCTACGACATCGATCCATCTCATGTGAGGAAGCAAACTGGAAGTTTTGCCGCAGCCTTTGCTAGACACCGGAAAACTCAATCGCTGAACAAGGTGAAGGAATGGAGGGAAGCACTTGCACAAGTTGCAAATCTGGCGGGGATCGTCTTGCAGAACCAAGTTGATGGCCAGGGCTCCGACGACGCTGGACTCTCCGAGTGGCTTGAAGTAGTGGTAGTACTCAGGCAACGAATTCTCCTTTTGGGGTTATTGAAAAGTGTTAGTGAAGGAATAACTAAGATTGCAGATGCCATAAACTCTAGAAGAGTTCTTCTTGTTCTTGATGATGTGGATCATATGGACCAATTAGATGCAGTACTTAGGTTGCAAGATCGGTTTTATCCAGGAAGTAAAATCATAATAACAACTAGGCGTCTGAGGTTATTGAAGGCTCAGCATGTTACTAATGTGCATATTGTTGAAACTTTGAATTACAAGGAATCATTGGAACTCTTCAGTTGGCATGCTTTTGGACAGAACCTTCCTGTTGAAGGTTACATGAAACACTCAGAAATGGTAGTACACCACAGCGGAGGACTTCCGTTAGCTCTTCAAGTTTTGGGCTCTTCTTTACTTGGGGAAAGTATAAGTTTATGGGAAAGTGCTTTACAAAAATTAGAAGCTATTTCCAATGGTGAAATTGTGAATAAACTCAAAATGAGCTACGAATCTTTACAAGATGACCATGACCGAAGGTTGTTCCTCCACATTGCTTGTTTCTTTATTGGAAAAAACAGGTATAATATTGTGAGATTACTAGATGATTGCGATTACTATACTACTGTTGGGATTCAAAATCTCGTTGATAGAGGTTTAGTGACAATTGATGTATATGATAAAGTGCAAATGCATAATATGATCCGTGACATGGGAAGAAGAATTGTTCGCCAAGAATCAGAGGATCCTGAAAAACGCAGTAGGTTATGGCATTATAAGGATTCCATCAAAGTACTGACAGAAAAGAATATCCTTGATCTCAGCTATTTTCATGGCCTTACTGAAATTGCTAATTTCTCACCTTGTCCCAATCTGGAGAAACTTGTTCTTGTAGATTGTGAAAACCTGATTGATGTCCATGAATCGATTGGAAGCCTTGAGAGACTTGTTTACTTGAACATGAAAGATTGCAAAAGTATTATGATGCTTCCGGAGAATATATATTTGTATGCTATAGTCACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009664 GO:0009832 GO:0009987 GO:0010289 GO:0010383 GO:0010393 GO:0010394 GO:0012505 GO:0016043 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0017144 GO:0031410 GO:0031982 GO:0031984 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0045488 GO:0045489 GO:0047262 GO:0052325 GO:0052546 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0097708 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00520 map00520

Pfam Domains

Protein Families

Glyco_transf_8

Protein Analysis

518

Amino Acids

59.5

Weight (kDa)

6.48

Isoelectric Point (pI)

49.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIR	PF01582	17 - 165	9.5e-44	TIR domain
TIR_2	PF13676	19 - 118	8.9e-13	TIR domain
NB-ARC	PF00931	203 - 285	8e-09	NB-ARC domain
WHD_ROQ1	PF23282	354 - 424	2e-22	Disease resistance protein Roq1-like, winged-helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008264)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61130
fragaria_vesca	FvH4_7g12620 FvH4_7g12620 FvH4_7g12620 FvH4_7g12620 FvH4_7g12620
malus_domestica	MD00G1136600.v1.1 MD02G1197800.v1.1
prunus_persica	Prupe.2G150800_v2.0.a1 Prupe.2G150800_v2.0.a1
pyrus_communis	pycom02g16150 pycom07g11590
rosa_chinensis	RchiOBHm_Chr1g0351641
rosa_laevigata	RLG00000028393
rosa_multiflora	Rmu_sc0001144.1_g000007
rosa_roxburghii	Rroxscaffold_4G00303640
rosa_rugosa	Rorug01G0219600 Rorug01G0219700
rosa_samantha	Rh1AG234300 Rh1BG204900 Rh1CG218900 Rh1DG231900
rosa_wichuraiana	Rw1G020400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1308
AccB1I	GGYRCC	1 cut(s)	261
AccIII	TCCGGA	1 cut(s)	1522
AciI	CCGC	5 cut(s)	85, 136, 387, 473, 906
AclWI	GGATC	6 cut(s)	344, 485, 675, 1228, 1271, 1284
AcoI	YGGCCR	1 cut(s)	502
AcsI	RAATTY	1 cut(s)	567
AcuI	CTGAAG	1 cut(s)	814
AcyI	GRCGYC	2 cut(s)	262, 748
AfaI	GTAC	4 cut(s)	555, 693, 897, 1326
AfiI	CCNNNNNNNGG	3 cut(s)	112, 866, 1243
AgsI	TTSAA	9 cut(s)	542, 589, 763, 797, 805, 866, 929, 1169, 1489
AjnI	CCWGG	4 cut(s)	4, 117, 504, 718
AleI	CACNNNNGTG	1 cut(s)	281
AluBI	AGCT	7 cut(s)	48, 190, 219, 923, 998, 1038, 1356
AluI	AGCT	7 cut(s)	48, 190, 219, 923, 998, 1038, 1356
Alw21I	GWGCWC	2 cut(s)	221, 288
Alw26I	GTCTC	2 cut(s)	141, 1468
AlwI	GGATC	6 cut(s)	344, 485, 675, 1228, 1271, 1284
Aor13HI	TCCGGA	1 cut(s)	1522
AoxI	GGCC	3 cut(s)	114, 502, 1366
ApeKI	GCWGC	1 cut(s)	389
ApoI	RAATTY	1 cut(s)	567
AspLEI	GCGC	1 cut(s)	264
AspS9I	GGNCC	2 cut(s)	115, 676
AsuHPI	GGTGA	5 cut(s)	20, 88, 442, 1022, 1383
AvaII	GGWCC	1 cut(s)	676
BalI	TGGCCA	1 cut(s)	504
BamHI	GGATCC	1 cut(s)	1276
BanI	GGYRCC	1 cut(s)	261
BanII	GRGCYC	3 cut(s)	221, 512, 941
BauI	CACGAG	1 cut(s)	312
BbsI	GAAGAC	2 cut(s)	49, 84
Bbv12I	GWGCWC	2 cut(s)	221, 288
BbvI	GCAGC	1 cut(s)	401
BccI	CCATC	6 cut(s)	209, 213, 230, 361, 494, 1325
BceAI	ACGGC	1 cut(s)	129
BciT130I	CCWGG	4 cut(s)	6, 119, 506, 720
BcoDI	GTCTC	2 cut(s)	141, 1468
BfaI	CTAG	4 cut(s)	399, 636, 744, 1133
BfmI	CTRYAG	1 cut(s)	1545
BfoI	RGCGCY	1 cut(s)	265
BisI	GCNGC	2 cut(s)	387, 390
BlpI	GCTNAGC	1 cut(s)	768
BlsI	GCNGC	2 cut(s)	388, 391
BmcAI	AGTACT	3 cut(s)	555, 693, 1326
Bme1390I	CCNGG	4 cut(s)	6, 119, 506, 720
Bme18I	GGWCC	1 cut(s)	676
BmgT120I	GGNCC	2 cut(s)	115, 676
BmiI	GGNNCC	3 cut(s)	263, 511, 1278
BmrFI	CCNGG	4 cut(s)	6, 119, 506, 720
BmsI	GCATC	3 cut(s)	613, 676, 1506
BpiI	GAAGAC	2 cut(s)	49, 84
BpmI	CTGGAG	1 cut(s)	1427
Bpu1102I	GCTNAGC	1 cut(s)	768
BpuEI	CTTGAG	1 cut(s)	1490
Bsa29I	ATCGAT	2 cut(s)	348, 1457
BsaBI	GATNNNNATC	1 cut(s)	666
BsaHI	GRCGYC	2 cut(s)	262, 748
BsaJI	CCNNGG	2 cut(s)	117, 505
BsaWI	WCCGGW	2 cut(s)	405, 1522
BsaXI	ACNNNNNCTCC	2 cut(s)	555, 585
Bsc4I	CCNNNNNNNGG	3 cut(s)	112, 866, 1243
Bse1I	ACTGG	1 cut(s)	379
Bse3DI	GCAATG	1 cut(s)	1083
Bse8I	GATNNNNATC	1 cut(s)	666
BseAI	TCCGGA	1 cut(s)	1522
BseBI	CCWGG	4 cut(s)	6, 119, 506, 720
BseCI	ATCGAT	2 cut(s)	348, 1457
BseDI	CCNNGG	2 cut(s)	117, 505
BseGI	GGATG	1 cut(s)	201
BseJI	GATNNNNATC	1 cut(s)	666
BseLI	CCNNNNNNNGG	3 cut(s)	112, 866, 1243
BseMI	GCAATG	1 cut(s)	1083
BseMII	CTCAG	6 cut(s)	76, 571, 743, 782, 897, 1366
BseNI	ACTGG	1 cut(s)	379
BseRI	GAGGAG	1 cut(s)	278
BseXI	GCAGC	1 cut(s)	401
BshFI	GGCC	3 cut(s)	116, 504, 1368
BshNI	GGYRCC	1 cut(s)	261
BshVI	ATCGAT	2 cut(s)	348, 1457
BsiHKAI	GWGCWC	2 cut(s)	221, 288
BsiSI	CCGG	3 cut(s)	185, 406, 1523
BslFI	GGGAC	1 cut(s)	1383
BslI	CCNNNNNNNGG	3 cut(s)	112, 866, 1243
BsmAI	GTCTC	2 cut(s)	141, 1468
BsmBI	CGTCTC	1 cut(s)	141
BsmFI	GGGAC	1 cut(s)	1383
BsnI	GGCC	3 cut(s)	116, 504, 1368
Bsp1286I	GDGCHC	4 cut(s)	221, 288, 512, 941
Bsp13I	TCCGGA	1 cut(s)	1522
Bsp143I	GATC	7 cut(s)	349, 477, 667, 706, 1233, 1276, 1348
Bsp1720I	GCTNAGC	1 cut(s)	768
BspACI	CCGC	5 cut(s)	85, 136, 387, 473, 906
BspANI	GGCC	3 cut(s)	116, 504, 1368
BspCNI	CTCAG	6 cut(s)	75, 570, 744, 781, 896, 1365
BspDI	ATCGAT	2 cut(s)	348, 1457
BspEI	TCCGGA	1 cut(s)	1522
BspLI	GGNNCC	3 cut(s)	263, 511, 1278
BspPI	GGATC	6 cut(s)	344, 485, 675, 1228, 1271, 1284
BspQI	GCTCTTC	2 cut(s)	930, 946
BspT107I	GGYRCC	1 cut(s)	261
BsrDI	GCAATG	1 cut(s)	1083
BsrI	ACTGG	1 cut(s)	379
BssECI	CCNNGG	2 cut(s)	117, 505
BssMI	GATC	7 cut(s)	349, 477, 667, 706, 1233, 1276, 1348
BssNI	GRCGYC	2 cut(s)	262, 748
BssSI	CACGAG	1 cut(s)	312
Bst2BI	CACGAG	1 cut(s)	312
Bst2UI	CCWGG	4 cut(s)	6, 119, 506, 720
Bst4CI	ACNGT	1 cut(s)	1159
Bst6I	CTCTTC	5 cut(s)	256, 634, 833, 930, 946
BstACI	GRCGYC	2 cut(s)	262, 748
BstAPI	GCANNNNNTGC	2 cut(s)	395, 461
BstC8I	GCNNGC	1 cut(s)	840
BstDEI	CTNAG	8 cut(s)	62, 557, 612, 695, 752, 768, 883, 1352
BstENI	CCTNNNNNAGG	1 cut(s)	864
BstF5I	GGATG	1 cut(s)	201
BstH2I	RGCGCY	1 cut(s)	265
BstHHI	GCGC	1 cut(s)	264
BstKTI	GATC	7 cut(s)	352, 480, 670, 709, 1236, 1279, 1351
BstMAI	GTCTC	2 cut(s)	141, 1468
BstMBI	GATC	7 cut(s)	349, 477, 667, 706, 1233, 1276, 1348
BstMWI	GCNNNNNNNGC	3 cut(s)	395, 461, 470
BstNI	CCWGG	4 cut(s)	6, 119, 506, 720
BstNSI	RCATGY	2 cut(s)	776, 842
BstSCI	CCNGG	4 cut(s)	4, 117, 504, 718
BstSFI	CTRYAG	1 cut(s)	1545
BstV1I	GCAGC	1 cut(s)	401
BstV2I	GAAGAC	2 cut(s)	49, 84
BstX2I	RGATCY	1 cut(s)	1276
BstXI	CCANNNNNNTGG	1 cut(s)	500
BstYI	RGATCY	1 cut(s)	1276
Bsu15I	ATCGAT	2 cut(s)	348, 1457
BsuRI	GGCC	3 cut(s)	116, 504, 1368
BsuTUI	ATCGAT	2 cut(s)	348, 1457
BtsCI	GGATG	1 cut(s)	201
Cac8I	GCNNGC	1 cut(s)	840
CfoI	GCGC	1 cut(s)	264
Cfr13I	GGNCC	2 cut(s)	115, 676
ClaI	ATCGAT	2 cut(s)	348, 1457
CseI	GACGC	2 cut(s)	527, 737
Csp6I	GTAC	4 cut(s)	554, 692, 896, 1325
CspCI	CAANNNNNGTGG	2 cut(s)	1070, 1105
CviAII	CATG	9 cut(s)	359, 773, 839, 874, 1061, 1243, 1364, 1451, 1492
CviQI	GTAC	4 cut(s)	554, 692, 896, 1325
DdeI	CTNAG	8 cut(s)	62, 557, 612, 695, 752, 768, 883, 1352
DinI	GGCGCC	1 cut(s)	263
DpnI	GATC	7 cut(s)	351, 479, 669, 708, 1235, 1278, 1350
DpnII	GATC	7 cut(s)	349, 477, 667, 706, 1233, 1276, 1348
EaeI	YGGCCR	1 cut(s)	502
Eam1104I	CTCTTC	5 cut(s)	256, 634, 833, 930, 946
EarI	CTCTTC	5 cut(s)	256, 634, 833, 930, 946
Ecl136II	GAGCTC	1 cut(s)	219
Eco24I	GRGCYC	3 cut(s)	221, 512, 941
Eco32I	GATATC	1 cut(s)	178
Eco47I	GGWCC	1 cut(s)	676
Eco53kI	GAGCTC	1 cut(s)	219
Eco57I	CTGAAG	1 cut(s)	814
EcoICRI	GAGCTC	1 cut(s)	219
EcoNI	CCTNNNNNAGG	1 cut(s)	864
EcoRI	GAATTC	1 cut(s)	567
EcoRII	CCWGG	4 cut(s)	4, 117, 504, 718
EcoRV	GATATC	1 cut(s)	178
EcoT22I	ATGCAT	1 cut(s)	1227
EcoT38I	GRGCYC	3 cut(s)	221, 512, 941
EgeI	GGCGCC	1 cut(s)	263
EheI	GGCGCC	1 cut(s)	263
Esp3I	CGTCTC	1 cut(s)	141
FaeI	CATG	9 cut(s)	362, 776, 842, 877, 1064, 1246, 1367, 1454, 1495
FaqI	GGGAC	1 cut(s)	1383
FatI	CATG	9 cut(s)	358, 772, 838, 873, 1060, 1242, 1363, 1450, 1491
FauI	CCCGC	2 cut(s)	92, 466
FauNDI	CATATG	1 cut(s)	672
Fnu4HI	GCNGC	2 cut(s)	387, 390
FokI	GGATG	1 cut(s)	188
FriOI	GRGCYC	3 cut(s)	221, 512, 941
Fsp4HI	GCNGC	2 cut(s)	387, 390
FspBI	CTAG	4 cut(s)	399, 636, 744, 1133
GlaI	GCGC	1 cut(s)	263
GluI	GCNGC	2 cut(s)	387, 390
GsuI	CTGGAG	1 cut(s)	1427
HaeII	RGCGCY	1 cut(s)	265
HaeIII	GGCC	3 cut(s)	116, 504, 1368
HapII	CCGG	3 cut(s)	185, 406, 1523
HgaI	GACGC	2 cut(s)	527, 737
HhaI	GCGC	1 cut(s)	264
Hin1I	GRCGYC	2 cut(s)	262, 748
Hin1II	CATG	9 cut(s)	362, 776, 842, 877, 1064, 1246, 1367, 1454, 1495
Hin6I	GCGC	1 cut(s)	262
HinP1I	GCGC	1 cut(s)	262
HincII	GTYRAC	1 cut(s)	124
HindII	GTYRAC	1 cut(s)	124
HinfI	GANTC	8 cut(s)	132, 525, 815, 1043, 1165, 1268, 1313, 1454
HpaII	CCGG	3 cut(s)	185, 406, 1523
HphI	GGTGA	5 cut(s)	20, 88, 442, 1022, 1383
Hpy166II	GTNNAC	3 cut(s)	124, 898, 1483
Hpy188I	TCNGA	7 cut(s)	71, 146, 514, 532, 753, 886, 1273
Hpy188III	TCNNGA	5 cut(s)	636, 656, 1280, 1406, 1523
Hpy8I	GTNNAC	3 cut(s)	124, 898, 1483
Hpy99I	CGWCG	4 cut(s)	230, 308, 518, 521
HpyAV	CCTTC	6 cut(s)	427, 596, 757, 860, 866, 1062
HpyCH4III	ACNGT	1 cut(s)	1159
HpyF10VI	GCNNNNNNNGC	3 cut(s)	395, 461, 470
HpyF3I	CTNAG	8 cut(s)	62, 557, 612, 695, 752, 768, 883, 1352
Hsp92I	GRCGYC	2 cut(s)	262, 748
Hsp92II	CATG	9 cut(s)	362, 776, 842, 877, 1064, 1246, 1367, 1454, 1495
HspAI	GCGC	1 cut(s)	262
KasI	GGCGCC	1 cut(s)	261
Kpn2I	TCCGGA	1 cut(s)	1522
Kzo9I	GATC	7 cut(s)	349, 477, 667, 706, 1233, 1276, 1348
LguI	GCTCTTC	2 cut(s)	930, 946
LmnI	GCTCC	5 cut(s)	187, 216, 224, 291, 515
Lsp1109I	GCAGC	1 cut(s)	401
LweI	GCATC	3 cut(s)	613, 676, 1506
MaeI	CTAG	4 cut(s)	399, 636, 744, 1133
MaeIII	GTNAC	5 cut(s)	775, 869, 1192, 1238, 1549
MalI	GATC	7 cut(s)	351, 479, 669, 708, 1235, 1278, 1350
MboI	GATC	7 cut(s)	349, 477, 667, 706, 1233, 1276, 1348
MfeI	CAATTG	1 cut(s)	1197
MflI	RGATCY	1 cut(s)	1276
MhlI	GDGCHC	4 cut(s)	221, 288, 512, 941
MlsI	TGGCCA	1 cut(s)	504
MluNI	TGGCCA	1 cut(s)	504
Mly113I	GGCGCC	1 cut(s)	262
MlyI	GAGTC	1 cut(s)	519
MmeI	TCCRAC	2 cut(s)	316, 537
Mox20I	TGGCCA	1 cut(s)	504
Mph1103I	ATGCAT	1 cut(s)	1227
MroI	TCCGGA	1 cut(s)	1522
MscI	TGGCCA	1 cut(s)	504
MslI	CAYNNNNRTG	1 cut(s)	281
Msp20I	TGGCCA	1 cut(s)	504
MspA1I	CMGCKG	1 cut(s)	906
MspI	CCGG	3 cut(s)	185, 406, 1523
MspR9I	CCNGG	4 cut(s)	6, 119, 506, 720
MunI	CAATTG	1 cut(s)	1197
MvaI	CCWGG	4 cut(s)	6, 119, 506, 720
MwoI	GCNNNNNNNGC	3 cut(s)	395, 461, 470
NarI	GGCGCC	1 cut(s)	262
NdeI	CATATG	1 cut(s)	672
NdeII	GATC	7 cut(s)	349, 477, 667, 706, 1233, 1276, 1348
NlaIII	CATG	9 cut(s)	362, 776, 842, 877, 1064, 1246, 1367, 1454, 1495
NlaIV	GGNNCC	3 cut(s)	263, 511, 1278
NmuCI	GTSAC	3 cut(s)	1192, 1238, 1549
NsiI	ATGCAT	1 cut(s)	1227
NspI	RCATGY	2 cut(s)	776, 842
OliI	CACNNNNGTG	1 cut(s)	281
PaeI	GCATGC	1 cut(s)	842
PciSI	GCTCTTC	2 cut(s)	930, 946
PcsI	WCGNNNNNNNCGW	1 cut(s)	37
PfeI	GAWTC	7 cut(s)	132, 815, 1043, 1165, 1268, 1313, 1454
PfoI	TCCNGGA	1 cut(s)	718
PkrI	GCNGC	2 cut(s)	388, 391
PleI	GAGTC	1 cut(s)	519
PluTI	GGCGCC	1 cut(s)	265
PpsI	GAGTC	1 cut(s)	519
PsiI	TTATAA	1 cut(s)	1308
Psp124BI	GAGCTC	1 cut(s)	221
Psp6I	CCWGG	4 cut(s)	4, 117, 504, 718
PspGI	CCWGG	4 cut(s)	4, 117, 504, 718
PspN4I	GGNNCC	3 cut(s)	263, 511, 1278
PspPI	GGNCC	2 cut(s)	115, 676
PsuI	RGATCY	1 cut(s)	1276
RsaI	GTAC	4 cut(s)	555, 693, 897, 1326
RsaNI	GTAC	4 cut(s)	554, 692, 896, 1325
RseI	CAYNNNNRTG	1 cut(s)	281
SacI	GAGCTC	1 cut(s)	221
SapI	GCTCTTC	2 cut(s)	930, 946
SatI	GCNGC	2 cut(s)	387, 390
Sau3AI	GATC	7 cut(s)	349, 477, 667, 706, 1233, 1276, 1348
Sau96I	GGNCC	2 cut(s)	115, 676
ScaI	AGTACT	3 cut(s)	555, 693, 1326
SchI	GAGTC	1 cut(s)	519
ScrFI	CCNGG	4 cut(s)	6, 119, 506, 720
SduI	GDGCHC	4 cut(s)	221, 288, 512, 941
SfaNI	GCATC	3 cut(s)	613, 676, 1506
SfcI	CTRYAG	1 cut(s)	1545
SfoI	GGCGCC	1 cut(s)	263
SinI	GGWCC	1 cut(s)	676
SmiMI	CAYNNNNRTG	1 cut(s)	281
SmlI	CTYRAG	1 cut(s)	1469
SmoI	CTYRAG	1 cut(s)	1469
SphI	GCATGC	1 cut(s)	842
SsiI	CCGC	5 cut(s)	85, 136, 387, 473, 906
SspDI	GGCGCC	1 cut(s)	261
SspI	AATATT	1 cut(s)	1120
SspMI	CTAG	4 cut(s)	399, 636, 744, 1133
SstI	GAGCTC	1 cut(s)	221
StyD4I	CCNGG	4 cut(s)	4, 117, 504, 718
TaaI	ACNGT	1 cut(s)	1159
TaqI	TCGA	3 cut(s)	40, 348, 1457
TaqII	GACCGA	1 cut(s)	1080
TatI	WGTACW	4 cut(s)	553, 691, 895, 1324
TauI	GCSGC	1 cut(s)	389
TfiI	GAWTC	7 cut(s)	132, 815, 1043, 1165, 1268, 1313, 1454
TseFI	GTSAC	3 cut(s)	1192, 1238, 1549
TseI	GCWGC	1 cut(s)	389
Tsp45I	GTSAC	3 cut(s)	1192, 1238, 1549
TspDTI	ATGAA	4 cut(s)	890, 1352, 1467, 1508
TspGWI	ACGGA	3 cut(s)	229, 906, 1226
VpaK11BI	GGWCC	1 cut(s)	676
XagI	CCTNNNNNAGG	1 cut(s)	864
XapI	RAATTY	1 cut(s)	567
XbaI	TCTAGA	1 cut(s)	635
XceI	RCATGY	2 cut(s)	776, 842
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1457
XspI	CTAG	4 cut(s)	399, 636, 744, 1133
ZrmI	AGTACT	3 cut(s)	555, 693, 1326
Zsp2I	ATGCAT	1 cut(s)	1227

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.