FvH4_7g21500

Receptor-like protein kinase THESEUS

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
17186454 .. 17189433
2980 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g21500.t2

Sequence Viewer

Length: 1872 bp
ATGGGAGGTCCACATATAACACCCAAGAATGACACATTGTGGAGGACATGGGAACCAGATCAGGCTTTTCTTGTCAATGCTGCATCTGCGAGAAATGTCACAGCCAATCCACGCTCAATCAAGTACCCTGATGGAGTTTCAGTCGAAATTGCACCAAATTGGGTTTATGCCACAGCTCAGGAAATGGCAGATGCAAATGTGTTGAATCAGAAATTTAACATATCATGGGGATTTAAAGTTGAAAATGGCTTCAGCTATCTTATTAGGCTGCATTTCTGTGACATTGTAAGTACATCTCTAAATAATTTGCTGTTCAATGTGTATGTCAATCAACTATCTGCTCTAGACTGTTTTGATATCTCAAGCAGGACAATGTCATTGTCAGCAGCTTACTTCATAGACTTTGTGACAAATGTGTCAATGGGATCAGACCGGATTTTGGTTCAGATTGGTCCTCCCATGCTAACAGGCCTCTCATCCAATGCAATCTTGAATGGTTTGGAGATTATGAAAATGAGCAACTCTAGAGACAGCCTTGATGTAAATCTTCCAGGGGAGTATTATACGGATTTGAAATCCCCTGTAGGCAAGAAAAAGTGGATGATGCTGGCAGTTTGTTCTTCTTCAGCAGGATTCGTAGTCTTTGTGATTTTGTCAACTGCTTTCTATCTGTATCTGCGTCGAATCCATCAAAAGAAGAAAAATACTCACTGCTCAAGTTCAACATGGCTGCCACTTCCTACTCATGTAGGACTGTCTGATTCTAAAGTTTCGATTGACAGCTCTTCTTCCACATCACCTTCGCTTGGTTTAGGCCGAGTATTTGCTTTCTCAGATATCAGTGAAGCAACAAATAACTTTGACAAGAAATTGGTTTTGGGGGTGGGTGGATTTGGAATGGTTTATAGAGGAGTTCTAGAAAATGGGAGTGTAGTTGCAGTAAAGCGTGGAAATCCACGGTCTCAACAAGGACTCACAGAATTCCGGACAGAAATTGAGATGCTGTCAAAGATGAGGCATAGACATTTGGTTTCTCTTATAGGCTACTGTGAGGAACTTAATGAGATGATCCTTGTTTATGAATTCATGGCTGGTGGTCCTCTTCGAAAACATTTGTATGGCTCAGATTTTCCTTCACTGACATGGAAACAAAGGCTTGAGATCTGCATAGGAGCTGCAAAAGGATTGCATTACCTTCACACAGGAGCAGCGGAGACTATAATTCACAGAGATGTCAAATCAACCAACATACTTCTTGATGAGAATCTGACTGCTAAAGTGGCTGATTTCGGATTGTCAAAGTTAGGCCCTACTTTGAATCAAACACACGTAAGTACTGCAGTGAAGGGGAGCTTTGGTTATCTTGATCCAGATTACTATCGTCGGCAGCAACTCACTGAGAAGTCAGATGTATACTCATTTGGAGTAGTTTTATTAGAGGTATTATGTGCTAGACCTGCTATAAGCCCTTCACTCCCGAGAGAAGAGGTTAATATAGCTGAATGGGCCATGAACTTTCAAAAGAAAGGAAGATTGGAGAAGATTATGGACCGGAATCTTGTAGGGAGTGTCAATCTTGAATCACTGAGAAAATTTGGTGAAACAGCAGAGAAGTGTTTGCTTGAATATGGGGTTGAGAGGCCAACAATGGGAGATGTGTTATGGAATTTGGAGTATGCTCTTCAACTACAAGAGGCTTCTATACAATTCACCGCTTCAGCTGCAAACAGTGCAAATTACATTTCAGATATTCCAGAATGGCTTCCACAAATTGAAATTGGCAATGGTGATGGTCATGACCACAGTGATCAAGAATCTGATACAACATCAAGTGCAGTGTTTTCAGAGTTGGAGGATCCCAGAGGAAGATAG

Protein Analysis

624

Amino Acids

69.16

Weight (kDa)

6.01

Isoelectric Point (pI)

37.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 6 - 171 4.5e-12 Malectin-like domain
Pkinase PF00069 289 - 503 3.1e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 292 - 485 1.4e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014801)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 415
Acc36I ACCTGC 1 cut(s) 1465
AccI GTMKAC 1 cut(s) 1413
AccIII TCCGGA 1 cut(s) 984
AciI CCGC 2 cut(s) 1211, 1713
AclWI GGATC 5 cut(s) 433, 1063, 1361, 1850, 1863
AcsI RAATTY 5 cut(s) 212, 980, 1082, 1592, 1666
AcuI CTGAAG 3 cut(s) 235, 609, 1701
AdeI CACNNNGTG 1 cut(s) 39
AfaI GTAC 3 cut(s) 125, 292, 1336
AfiI CCNNNNNNNGG 3 cut(s) 439, 806, 1649
AflIII ACRYGT 1 cut(s) 1327
AjnI CCWGG 1 cut(s) 550
AjuI GAANNNNNNNTTGG 4 cut(s) 860, 892, 1517, 1549
AluBI AGCT 8 cut(s) 176, 255, 389, 783, 1175, 1353, 1499, 1721
AluI AGCT 8 cut(s) 176, 255, 389, 783, 1175, 1353, 1499, 1721
Alw26I GTCTC 3 cut(s) 522, 966, 1208
AlwI GGATC 5 cut(s) 433, 1063, 1361, 1850, 1863
Ama87I CYCGRG 1 cut(s) 1477
Aor13HI TCCGGA 1 cut(s) 984
AoxI GGCC 5 cut(s) 469, 814, 1306, 1506, 1640
ApeKI GCWGC 8 cut(s) 80, 268, 386, 730, 1175, 1208, 1387, 1721
ApoI RAATTY 5 cut(s) 212, 980, 1082, 1592, 1666
Asp700I GAANNNNTTC 1 cut(s) 1761
AspS9I GGNCC 6 cut(s) 8, 452, 1097, 1307, 1506, 1549
AsuHPI GGTGA 4 cut(s) 789, 1610, 1702, 1799
AsuII TTCGAA 1 cut(s) 1105
AvaI CYCGRG 1 cut(s) 1477
AvaII GGWCC 4 cut(s) 8, 452, 1097, 1549
BamHI GGATCC 1 cut(s) 1855
BbvI GCAGC 8 cut(s) 67, 255, 398, 717, 1162, 1220, 1399, 1708
BccI CCATC 3 cut(s) 125, 696, 1784
BciT130I CCWGG 1 cut(s) 552
BclI TGATCA 1 cut(s) 1807
BcoDI GTCTC 3 cut(s) 522, 966, 1208
BfaI CTAG 4 cut(s) 344, 525, 917, 1452
BfmI CTRYAG 2 cut(s) 582, 1338
BfuAI ACCTGC 1 cut(s) 1465
BglII AGATCT 1 cut(s) 1161
BisI GCNGC 8 cut(s) 81, 269, 387, 731, 1176, 1209, 1388, 1722
BlsI GCNGC 8 cut(s) 82, 270, 388, 732, 1177, 1210, 1389, 1723
BmcAI AGTACT 1 cut(s) 1336
Bme1390I CCNGG 1 cut(s) 552
Bme18I GGWCC 4 cut(s) 8, 452, 1097, 1549
BmeT110I CYCGRG 1 cut(s) 1477
BmgT120I GGNCC 6 cut(s) 8, 452, 1097, 1307, 1506, 1549
BmiI GGNNCC 2 cut(s) 54, 1857
BmrFI CCNGG 1 cut(s) 552
BmsI GCATC 4 cut(s) 92, 181, 594, 990
Bpu10I CCTNAGC 1 cut(s) 177
Bpu14I TTCGAA 1 cut(s) 1105
BpuEI CTTGAG 3 cut(s) 346, 700, 1178
BsaAI YACGTR 1 cut(s) 1330
BsaBI GATNNNNATC 3 cut(s) 543, 1263, 1377
BsaI GGTCTC 1 cut(s) 966
BsaJI CCNNGG 2 cut(s) 551, 956
BsaWI WCCGGW 3 cut(s) 432, 984, 1551
BsaXI ACNNNNNCTCC 4 cut(s) 126, 156, 1342, 1372
Bsc4I CCNNNNNNNGG 3 cut(s) 439, 806, 1649
Bse3DI GCAATG 1 cut(s) 1789
Bse8I GATNNNNATC 3 cut(s) 543, 1263, 1377
BseAI TCCGGA 1 cut(s) 984
BseBI CCWGG 1 cut(s) 552
BseDI CCNNGG 2 cut(s) 551, 956
BseGI GGATG 2 cut(s) 476, 606
BseJI GATNNNNATC 3 cut(s) 543, 1263, 1377
BseLI CCNNNNNNNGG 3 cut(s) 439, 806, 1649
BseMI GCAATG 1 cut(s) 1789
BseMII CTCAG 5 cut(s) 191, 846, 1137, 1389, 1577
BseRI GAGGAG 1 cut(s) 924
BseXI GCAGC 8 cut(s) 67, 255, 398, 717, 1162, 1220, 1399, 1708
BsgI GTGCAG 1 cut(s) 1854
BshFI GGCC 5 cut(s) 471, 816, 1308, 1508, 1642
BsiHKCI CYCGRG 1 cut(s) 1477
BsiSI CCGG 3 cut(s) 433, 985, 1552
BslI CCNNNNNNNGG 3 cut(s) 439, 806, 1649
BsmAI GTCTC 3 cut(s) 522, 966, 1208
BsnI GGCC 5 cut(s) 471, 816, 1308, 1508, 1642
Bso31I GGTCTC 1 cut(s) 966
BsoBI CYCGRG 1 cut(s) 1477
Bsp119I TTCGAA 1 cut(s) 1105
Bsp13I TCCGGA 1 cut(s) 984
Bsp143I GATC 7 cut(s) 58, 425, 1068, 1161, 1366, 1807, 1855
BspACI CCGC 2 cut(s) 1211, 1713
BspANI GGCC 5 cut(s) 471, 816, 1308, 1508, 1642
BspCNI CTCAG 5 cut(s) 190, 845, 1136, 1390, 1578
BspEI TCCGGA 1 cut(s) 984
BspHI TCATGA 1 cut(s) 1795
BspLI GGNNCC 2 cut(s) 54, 1857
BspMAI CTGCAG 1 cut(s) 1342
BspMI ACCTGC 1 cut(s) 1465
BspPI GGATC 5 cut(s) 433, 1063, 1361, 1850, 1863
BspQI GCTCTTC 2 cut(s) 790, 1686
BspT104I TTCGAA 1 cut(s) 1105
BspTNI GGTCTC 1 cut(s) 966
BsrDI GCAATG 1 cut(s) 1789
BssECI CCNNGG 2 cut(s) 551, 956
BssMI GATC 7 cut(s) 58, 425, 1068, 1161, 1366, 1807, 1855
BssNAI GTATAC 1 cut(s) 1414
Bst1107I GTATAC 1 cut(s) 1414
Bst2UI CCWGG 1 cut(s) 552
Bst4CI ACNGT 6 cut(s) 350, 756, 960, 1049, 1730, 1805
Bst6I CTCTTC 4 cut(s) 790, 1107, 1479, 1686
BstAPI GCANNNNNTGC 1 cut(s) 1730
BstBAI YACGTR 1 cut(s) 1330
BstBI TTCGAA 1 cut(s) 1105
BstC8I GCNNGC 1 cut(s) 609
BstDEI CTNAG 5 cut(s) 177, 832, 1123, 1398, 1586
BstDSI CCRYGG 1 cut(s) 956
BstF5I GGATG 2 cut(s) 476, 606
BstKTI GATC 7 cut(s) 61, 428, 1071, 1164, 1369, 1810, 1858
BstMAI GTCTC 3 cut(s) 522, 966, 1208
BstMBI GATC 7 cut(s) 58, 425, 1068, 1161, 1366, 1807, 1855
BstMWI GCNNNNNNNGC 6 cut(s) 86, 1280, 1457, 1505, 1721, 1730
BstNI CCWGG 1 cut(s) 552
BstSCI CCNGG 1 cut(s) 550
BstSFI CTRYAG 2 cut(s) 582, 1338
BstV1I GCAGC 8 cut(s) 67, 255, 398, 717, 1162, 1220, 1399, 1708
BstX2I RGATCY 2 cut(s) 1161, 1855
BstYI RGATCY 2 cut(s) 1161, 1855
BstZ17I GTATAC 1 cut(s) 1414
BsuRI GGCC 5 cut(s) 471, 816, 1308, 1508, 1642
BtgI CCRYGG 1 cut(s) 956
BtsCI GGATG 2 cut(s) 476, 606
BtsI GCAGTG 3 cut(s) 709, 1347, 1842
BtsIMutI CAGTG 9 cut(s) 709, 847, 1136, 1347, 1395, 1583, 1735, 1810, 1842
BveI ACCTGC 1 cut(s) 1465
Cac8I GCNNGC 1 cut(s) 609
CciI TCATGA 1 cut(s) 1795
Cfr13I GGNCC 6 cut(s) 8, 452, 1097, 1307, 1506, 1549
CseI GACGC 1 cut(s) 668
Csp6I GTAC 3 cut(s) 124, 291, 1335
CviAII CATG 9 cut(s) 48, 225, 460, 726, 746, 1087, 1143, 1510, 1796
CviQI GTAC 3 cut(s) 124, 291, 1335
DdeI CTNAG 5 cut(s) 177, 832, 1123, 1398, 1586
DpnI GATC 7 cut(s) 60, 427, 1070, 1163, 1368, 1809, 1857
DpnII GATC 7 cut(s) 58, 425, 1068, 1161, 1366, 1807, 1855
DraI TTTAAA 1 cut(s) 235
DraIII CACNNNGTG 1 cut(s) 39
DrdI GACNNNNNNGTC 1 cut(s) 415
DseDI GACNNNNNNGTC 1 cut(s) 415
Eam1104I CTCTTC 4 cut(s) 790, 1107, 1479, 1686
EarI CTCTTC 4 cut(s) 790, 1107, 1479, 1686
Eco147I AGGCCT 1 cut(s) 471
Eco31I GGTCTC 1 cut(s) 966
Eco32I GATATC 2 cut(s) 358, 838
Eco47I GGWCC 4 cut(s) 8, 452, 1097, 1549
Eco57I CTGAAG 3 cut(s) 235, 609, 1701
Eco88I CYCGRG 1 cut(s) 1477
EcoO109I RGGNCCY 1 cut(s) 1307
EcoRI GAATTC 2 cut(s) 980, 1082
EcoRII CCWGG 1 cut(s) 550
EcoRV GATATC 2 cut(s) 358, 838
FaeI CATG 9 cut(s) 51, 228, 463, 729, 749, 1090, 1146, 1513, 1799
FalI AAGNNNNNCTT 2 cut(s) 1337, 1369
FatI CATG 9 cut(s) 47, 224, 459, 725, 745, 1086, 1142, 1509, 1795
FbaI TGATCA 1 cut(s) 1807
FblI GTMKAC 1 cut(s) 1413
Fnu4HI GCNGC 8 cut(s) 81, 269, 387, 731, 1176, 1209, 1388, 1722
FokI GGATG 2 cut(s) 463, 613
Fsp4HI GCNGC 8 cut(s) 81, 269, 387, 731, 1176, 1209, 1388, 1722
FspBI CTAG 4 cut(s) 344, 525, 917, 1452
GluI GCNGC 8 cut(s) 81, 269, 387, 731, 1176, 1209, 1388, 1722
HaeIII GGCC 5 cut(s) 471, 816, 1308, 1508, 1642
HapII CCGG 3 cut(s) 433, 985, 1552
HgaI GACGC 1 cut(s) 668
Hin1II CATG 9 cut(s) 51, 228, 463, 729, 749, 1090, 1146, 1513, 1799
HincII GTYRAC 1 cut(s) 657
HindII GTYRAC 1 cut(s) 657
HpaII CCGG 3 cut(s) 433, 985, 1552
HphI GGTGA 4 cut(s) 789, 1610, 1702, 1799
Hpy166II GTNNAC 3 cut(s) 11, 657, 1414
Hpy8I GTNNAC 3 cut(s) 11, 657, 1414
Hpy99I CGWCG 2 cut(s) 684, 1386
HpyAV CCTTC 5 cut(s) 810, 1143, 1205, 1339, 1479
HpyCH4III ACNGT 6 cut(s) 350, 756, 960, 1049, 1730, 1805
HpyCH4IV ACGT 1 cut(s) 1329
HpyF10VI GCNNNNNNNGC 6 cut(s) 86, 1280, 1457, 1505, 1721, 1730
HpyF3I CTNAG 5 cut(s) 177, 832, 1123, 1398, 1586
HpySE526I ACGT 1 cut(s) 1329
Hsp92II CATG 9 cut(s) 51, 228, 463, 729, 749, 1090, 1146, 1513, 1799
Kpn2I TCCGGA 1 cut(s) 984
Ksp22I TGATCA 1 cut(s) 1807
Kzo9I GATC 7 cut(s) 58, 425, 1068, 1161, 1366, 1807, 1855
LguI GCTCTTC 2 cut(s) 790, 1686
LmnI GCTCC 3 cut(s) 1172, 1205, 1350
Lsp1109I GCAGC 8 cut(s) 67, 255, 398, 717, 1162, 1220, 1399, 1708
LweI GCATC 4 cut(s) 92, 181, 594, 990
MaeI CTAG 4 cut(s) 344, 525, 917, 1452
MaeII ACGT 1 cut(s) 1329
MaeIII GTNAC 3 cut(s) 97, 278, 406
MalI GATC 7 cut(s) 60, 427, 1070, 1163, 1368, 1809, 1857
MboI GATC 7 cut(s) 58, 425, 1068, 1161, 1366, 1807, 1855
MflI RGATCY 2 cut(s) 1161, 1855
MlyI GAGTC 1 cut(s) 966
MmeI TCCRAC 1 cut(s) 1830
MroI TCCGGA 1 cut(s) 984
MroXI GAANNNNTTC 1 cut(s) 1761
MseI TTAA 4 cut(s) 216, 234, 1059, 1491
MslI CAYNNNNRTG 4 cut(s) 276, 1116, 1141, 1230
MspA1I CMGCKG 2 cut(s) 1211, 1721
MspI CCGG 3 cut(s) 433, 985, 1552
MspR9I CCNGG 1 cut(s) 552
MvaI CCWGG 1 cut(s) 552
MwoI GCNNNNNNNGC 6 cut(s) 86, 1280, 1457, 1505, 1721, 1730
NdeII GATC 7 cut(s) 58, 425, 1068, 1161, 1366, 1807, 1855
NlaIII CATG 9 cut(s) 51, 228, 463, 729, 749, 1090, 1146, 1513, 1799
NlaIV GGNNCC 2 cut(s) 54, 1857
NmeAIII GCCGAG 1 cut(s) 842
NmuCI GTSAC 3 cut(s) 97, 278, 406
NspV TTCGAA 1 cut(s) 1105
PagI TCATGA 1 cut(s) 1795
PceI AGGCCT 1 cut(s) 471
PciSI GCTCTTC 2 cut(s) 790, 1686
PdmI GAANNNNTTC 1 cut(s) 1761
PfeI GAWTC 9 cut(s) 205, 633, 684, 761, 1264, 1318, 1555, 1580, 1814
PflFI GACNNNGTC 1 cut(s) 373
PkrI GCNGC 8 cut(s) 82, 270, 388, 732, 1177, 1210, 1389, 1723
PleI GAGTC 1 cut(s) 966
PpsI GAGTC 1 cut(s) 966
Ppu21I YACGTR 1 cut(s) 1330
Psp6I CCWGG 1 cut(s) 550
PspGI CCWGG 1 cut(s) 550
PspN4I GGNNCC 2 cut(s) 54, 1857
PspPI GGNCC 6 cut(s) 8, 452, 1097, 1307, 1506, 1549
PstI CTGCAG 1 cut(s) 1342
PsuI RGATCY 2 cut(s) 1161, 1855
PsyI GACNNNGTC 1 cut(s) 373
PvuII CAGCTG 1 cut(s) 1721
RsaI GTAC 3 cut(s) 125, 292, 1336
RsaNI GTAC 3 cut(s) 124, 291, 1335
RseI CAYNNNNRTG 4 cut(s) 276, 1116, 1141, 1230
SapI GCTCTTC 2 cut(s) 790, 1686
SaqAI TTAA 4 cut(s) 216, 234, 1059, 1491
SatI GCNGC 8 cut(s) 81, 269, 387, 731, 1176, 1209, 1388, 1722
Sau3AI GATC 7 cut(s) 58, 425, 1068, 1161, 1366, 1807, 1855
Sau96I GGNCC 6 cut(s) 8, 452, 1097, 1307, 1506, 1549
ScaI AGTACT 1 cut(s) 1336
SchI GAGTC 1 cut(s) 966
ScrFI CCNGG 1 cut(s) 552
SfaNI GCATC 4 cut(s) 92, 181, 594, 990
SfcI CTRYAG 2 cut(s) 582, 1338
SfuI TTCGAA 1 cut(s) 1105
SinI GGWCC 4 cut(s) 8, 452, 1097, 1549
SmiMI CAYNNNNRTG 4 cut(s) 276, 1116, 1141, 1230
SmlI CTYRAG 3 cut(s) 361, 715, 1157
SmoI CTYRAG 3 cut(s) 361, 715, 1157
SseBI AGGCCT 1 cut(s) 471
SsiI CCGC 2 cut(s) 1211, 1713
SspMI CTAG 4 cut(s) 344, 525, 917, 1452
StuI AGGCCT 1 cut(s) 471
StyD4I CCNGG 1 cut(s) 550
TaaI ACNGT 6 cut(s) 350, 756, 960, 1049, 1730, 1805
TaiI ACGT 1 cut(s) 1332
TaqI TCGA 4 cut(s) 144, 682, 773, 1105
TatI WGTACW 2 cut(s) 290, 1334
TfiI GAWTC 9 cut(s) 205, 633, 684, 761, 1264, 1318, 1555, 1580, 1814
Tru1I TTAA 4 cut(s) 216, 234, 1059, 1491
Tru9I TTAA 4 cut(s) 216, 234, 1059, 1491
TscAI CASTG 9 cut(s) 716, 847, 1143, 1347, 1402, 1590, 1735, 1810, 1842
TseFI GTSAC 3 cut(s) 97, 278, 406
TseI GCWGC 8 cut(s) 80, 268, 386, 730, 1175, 1208, 1387, 1721
Tsp45I GTSAC 3 cut(s) 97, 278, 406
TspDTI ATGAA 5 cut(s) 385, 524, 1075, 1095, 1526
TspGWI ACGGA 1 cut(s) 581
TspRI CASTG 9 cut(s) 716, 847, 1143, 1347, 1402, 1590, 1735, 1810, 1842
Tth111I GACNNNGTC 1 cut(s) 373
VpaK11BI GGWCC 4 cut(s) 8, 452, 1097, 1549
XapI RAATTY 5 cut(s) 212, 980, 1082, 1592, 1666
XbaI TCTAGA 3 cut(s) 343, 524, 916
XmiI GTMKAC 1 cut(s) 1413
XmnI GAANNNNTTC 1 cut(s) 1761
XspI CTAG 4 cut(s) 344, 525, 917, 1452
ZrmI AGTACT 1 cut(s) 1336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.