Rorug01G0324400

Receptor-like protein kinase THESEUS

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
44355369 .. 44358119
2751 bp
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UTR
Exon/CDS
Intron
Rorug01G0324400.1

Sequence Viewer

Length: 564 bp
ATGTCGTCCTCAGCCCTCAAGTCCAAGAAGGGAAAGACACGTTATATATCTTCCTCTCAACGTCAGTTCGATCTCTCTCTCTTTTCTTGTTTGTTAATAGTATCTGAATTGTGTGTGGGTCAGAGGTCGGTGAAGAAGAAAGGGCTGTATTCTTTACCCCCGGTCGTGGCAGGCTTCTTTATCACTTGTGATCGTGCTGCTGCTTTATATGCAAAAGTATCCAATTTCTCTCTTAATGTCTATGGTCTGAATACCAAATCAAAGTATTGCTTGACCAACAAGAGAGGTTGTATGAAAGACAAGCTGAACTACAAGCTCTACTGGAAGCTTCCAAAGGTCCTGGACCCCCTGTTAATGGGGCTTCAACAGCCACAGAAGGCTGATTCTCATGATTTACTTAACGACAGCGCATTATTTCTTCGGAGTAGAGTTGAAAGGGTAGTATCTGATTGCTCTGACGTTGGTCTGTTAGGGGATCAAGATTTTGAAGCATATATGGGACGTTTTGAGCAGGAGCTTAGCTCCATGGAGGCCGAGAATGCTAAGGTTTCCAATGAAATTTGA

Protein Analysis

187

Amino Acids

20.98

Weight (kDa)

9.18

Isoelectric Point (pI)

43.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014801)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 483
AcsI RAATTY 1 cut(s) 558
AfiI CCNNNNNNNGG 2 cut(s) 166, 355
AflIII ACRYGT 1 cut(s) 38
AgsI TTSAA 3 cut(s) 365, 434, 488
AjnI CCWGG 1 cut(s) 339
AluBI AGCT 5 cut(s) 304, 316, 328, 517, 522
AluI AGCT 5 cut(s) 304, 316, 328, 517, 522
AlwI GGATC 1 cut(s) 483
AoxI GGCC 1 cut(s) 531
ApeKI GCWGC 2 cut(s) 197, 200
ApoI RAATTY 1 cut(s) 558
AspLEI GCGC 1 cut(s) 410
AspS9I GGNCC 2 cut(s) 337, 343
AsuC2I CCSGG 1 cut(s) 161
AsuHPI GGTGA 1 cut(s) 142
AvaII GGWCC 2 cut(s) 337, 343
BbvCI CCTCAGC 1 cut(s) 10
BbvI GCAGC 2 cut(s) 184, 187
BciT130I CCWGG 1 cut(s) 341
BciVI GTATCC 1 cut(s) 229
BcnI CCSGG 1 cut(s) 161
BfuI GTATCC 1 cut(s) 229
BisI GCNGC 2 cut(s) 198, 201
BlpI GCTNAGC 1 cut(s) 518
BlsI GCNGC 2 cut(s) 199, 202
Bme1390I CCNGG 2 cut(s) 161, 341
Bme18I GGWCC 2 cut(s) 337, 343
BmgT120I GGNCC 2 cut(s) 337, 343
BmiI GGNNCC 1 cut(s) 345
BmrFI CCNGG 2 cut(s) 161, 341
BoxI GACNNNNGTC 1 cut(s) 462
BplI GAGNNNNNCTC 2 cut(s) 506, 538
Bpu10I CCTNAGC 2 cut(s) 10, 543
Bpu1102I GCTNAGC 1 cut(s) 518
BpuMI CCSGG 1 cut(s) 161
BsaJI CCNNGG 2 cut(s) 159, 525
Bsc4I CCNNNNNNNGG 2 cut(s) 166, 355
Bse1I ACTGG 1 cut(s) 326
BseBI CCWGG 1 cut(s) 341
BseDI CCNNGG 2 cut(s) 159, 525
BseLI CCNNNNNNNGG 2 cut(s) 166, 355
BseMII CTCAG 1 cut(s) 24
BseNI ACTGG 1 cut(s) 326
BseXI GCAGC 2 cut(s) 184, 187
Bsh1285I CGRYCG 1 cut(s) 165
BshFI GGCC 1 cut(s) 533
BsiEI CGRYCG 1 cut(s) 165
BsiSI CCGG 1 cut(s) 161
BslFI GGGAC 1 cut(s) 513
BslI CCNNNNNNNGG 2 cut(s) 166, 355
BsmFI GGGAC 1 cut(s) 513
BsmI GAATGC 1 cut(s) 544
BsnI GGCC 1 cut(s) 533
Bsp143I GATC 3 cut(s) 70, 190, 475
Bsp1720I GCTNAGC 1 cut(s) 518
Bsp19I CCATGG 1 cut(s) 525
BspANI GGCC 1 cut(s) 533
BspCNI CTCAG 1 cut(s) 23
BspHI TCATGA 1 cut(s) 388
BspLI GGNNCC 1 cut(s) 345
BspPI GGATC 1 cut(s) 483
BsrI ACTGG 1 cut(s) 326
BssECI CCNNGG 2 cut(s) 159, 525
BssMI GATC 3 cut(s) 70, 190, 475
BssT1I CCWWGG 1 cut(s) 525
Bst2UI CCWGG 1 cut(s) 341
BstC8I GCNNGC 1 cut(s) 172
BstDEI CTNAG 3 cut(s) 10, 518, 543
BstDSI CCRYGG 1 cut(s) 525
BstHHI GCGC 1 cut(s) 410
BstKTI GATC 3 cut(s) 73, 193, 478
BstMBI GATC 3 cut(s) 70, 190, 475
BstMCI CGRYCG 1 cut(s) 165
BstMWI GCNNNNNNNGC 3 cut(s) 209, 367, 539
BstNI CCWGG 1 cut(s) 341
BstPAI GACNNNNGTC 1 cut(s) 462
BstSCI CCNGG 2 cut(s) 159, 339
BstV1I GCAGC 2 cut(s) 184, 187
BsuI GTATCC 1 cut(s) 229
BsuRI GGCC 1 cut(s) 533
BtgI CCRYGG 1 cut(s) 525
Cac8I GCNNGC 1 cut(s) 172
CciI TCATGA 1 cut(s) 388
CfoI GCGC 1 cut(s) 410
Cfr13I GGNCC 2 cut(s) 337, 343
CviAII CATG 2 cut(s) 389, 526
DdeI CTNAG 3 cut(s) 10, 518, 543
DpnI GATC 3 cut(s) 72, 192, 477
DpnII GATC 3 cut(s) 70, 190, 475
Eco130I CCWWGG 1 cut(s) 525
Eco47I GGWCC 2 cut(s) 337, 343
EcoO109I RGGNCCY 1 cut(s) 337
EcoRII CCWGG 1 cut(s) 339
EcoT14I CCWWGG 1 cut(s) 525
ErhI CCWWGG 1 cut(s) 525
FaeI CATG 2 cut(s) 392, 529
FalI AAGNNNNNCTT 2 cut(s) 254, 286
FaqI GGGAC 1 cut(s) 513
FatI CATG 2 cut(s) 388, 525
Fnu4HI GCNGC 2 cut(s) 198, 201
Fsp4HI GCNGC 2 cut(s) 198, 201
GlaI GCGC 1 cut(s) 409
GluI GCNGC 2 cut(s) 198, 201
HaeIII GGCC 1 cut(s) 533
HapII CCGG 1 cut(s) 161
HhaI GCGC 1 cut(s) 410
Hin1II CATG 2 cut(s) 392, 529
Hin6I GCGC 1 cut(s) 408
HinP1I GCGC 1 cut(s) 408
HindIII AAGCTT 1 cut(s) 326
HinfI GANTC 1 cut(s) 383
HpaII CCGG 1 cut(s) 161
HphI GGTGA 1 cut(s) 142
Hpy188I TCNGA 6 cut(s) 106, 123, 249, 423, 448, 457
Hpy188III TCNNGA 2 cut(s) 389, 479
HpyAV CCTTC 2 cut(s) 22, 370
HpyCH4IV ACGT 4 cut(s) 40, 61, 459, 502
HpyCH4V TGCA 1 cut(s) 212
HpyF10VI GCNNNNNNNGC 3 cut(s) 209, 367, 539
HpyF3I CTNAG 3 cut(s) 10, 518, 543
HpySE526I ACGT 4 cut(s) 40, 61, 459, 502
Hsp92II CATG 2 cut(s) 392, 529
HspAI GCGC 1 cut(s) 408
Kzo9I GATC 3 cut(s) 70, 190, 475
LmnI GCTCC 2 cut(s) 514, 527
LpnPI CCDG 7 cut(s) 156, 174, 307, 326, 353, 362, 497
Lsp1109I GCAGC 2 cut(s) 184, 187
MaeII ACGT 4 cut(s) 40, 61, 459, 502
MalI GATC 3 cut(s) 72, 192, 477
MboI GATC 3 cut(s) 70, 190, 475
MboII GAAGA 4 cut(s) 42, 145, 148, 410
MluCI AATT 3 cut(s) 107, 223, 558
MnlI CCTC 6 cut(s) 19, 26, 64, 117, 278, 523
MseI TTAA 4 cut(s) 95, 234, 353, 399
MspI CCGG 1 cut(s) 161
MspR9I CCNGG 2 cut(s) 161, 341
Mva1269I GAATGC 1 cut(s) 544
MvaI CCWGG 1 cut(s) 341
MwoI GCNNNNNNNGC 3 cut(s) 209, 367, 539
NciI CCSGG 1 cut(s) 161
NcoI CCATGG 1 cut(s) 525
NdeII GATC 3 cut(s) 70, 190, 475
NlaIII CATG 2 cut(s) 392, 529
NlaIV GGNNCC 1 cut(s) 345
NmeAIII GCCGAG 1 cut(s) 559
PagI TCATGA 1 cut(s) 388
PctI GAATGC 1 cut(s) 544
PfeI GAWTC 1 cut(s) 383
PfoI TCCNGGA 1 cut(s) 339
PkrI GCNGC 2 cut(s) 199, 202
PpuMI RGGWCCY 1 cut(s) 337
PshAI GACNNNNGTC 1 cut(s) 462
Psp5II RGGWCCY 1 cut(s) 337
Psp6I CCWGG 1 cut(s) 339
PspGI CCWGG 1 cut(s) 339
PspN4I GGNNCC 1 cut(s) 345
PspPI GGNCC 2 cut(s) 337, 343
PspPPI RGGWCCY 1 cut(s) 337
SaqAI TTAA 4 cut(s) 95, 234, 353, 399
SatI GCNGC 2 cut(s) 198, 201
Sau3AI GATC 3 cut(s) 70, 190, 475
Sau96I GGNCC 2 cut(s) 337, 343
ScrFI CCNGG 2 cut(s) 161, 341
SinI GGWCC 2 cut(s) 337, 343
SmlI CTYRAG 1 cut(s) 17
SmoI CTYRAG 1 cut(s) 17
Sse9I AATT 3 cut(s) 107, 223, 558
StyD4I CCNGG 2 cut(s) 159, 339
StyI CCWWGG 1 cut(s) 525
TaiI ACGT 4 cut(s) 43, 64, 462, 505
TaqI TCGA 1 cut(s) 69
TasI AATT 3 cut(s) 107, 223, 558
TfiI GAWTC 1 cut(s) 383
Tru1I TTAA 4 cut(s) 95, 234, 353, 399
Tru9I TTAA 4 cut(s) 95, 234, 353, 399
TseI GCWGC 2 cut(s) 197, 200
TspDTI ATGAA 1 cut(s) 308
VpaK11BI GGWCC 2 cut(s) 337, 343
XapI RAATTY 1 cut(s) 558
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.