FvH4_7g33230

UNC93-like protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
23685618 .. 23687803
2186 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g33230.t1

Sequence Viewer

Length: 1389 bp
ATGGGTTTCGAAGCTGGCGACGATTCCGACAAGGAGAAGGGCCAGAACCTCCCGCCGAACTCGATATTCCGGTACAACTCGCCGCTGGTGCAAGTGGGTCTGATCGGTCTGGTTTGCTTCTGCTGCCCCGGCATGTTCAACGCCCTCTCCGGCATGGGCGGAGGAGGCCAGGTAGACCCCACCGCCTCCAACAACGCCTCCACCGCTCTCTACACCACCTTCGCCATCTTCGGCATCCTCGGCGGCGGCATCTACAACATCCTCGGTCCACGTCTCACTCTCCTCTCCGCTTGCTCCACCTACGTCCTCTACGCCGGCTCTTTCCTCTACTACAACCACTACAAGCACCAGGCTTTCGCCATCACCGCCGGCGCCATTCTCGGCGTCGGCGCCGGCCTACTCTGGGCCGGGCAGGGCGCCATCATGACGTCATACCCGCCCCCGAATAGGAAGGGGACTTACATATCTATCTTTTGGAGTATCTTCAACATGGGAGGTGTCATTGGTGGGTTGATCCCATTTGTGCTCAATTACAACAGAACTGAGGCTGCTTCTGTGAATGATGCAACTTATATTGGGTTCATGGTGTTTATGAGTATCGGCACGTTTCTGACGCTGGCTATCTTGCCGCCGAGTAAGGTGGTACGTGACGACGGGACAAAGTGTACTAACATTCAGTACTCGAATGTCACTACGGAGGCGATTGAGATTGGGAAGCTGTTTCTGAATTGGAAGATGCTGCTTATTGTCCCTGCTGCTTGGTCTAGCAACTTTTTTTATACGTACCAGTTTAACAATGTGAATGGGGTGATGTTCAATTTGAGGACTAGGGGTTTGAACAATGTGGTCTACTGGGGTGCACAGATGGCTGGGTCGATTGGGATTGGTTACATAATGGATTTCAGCTTCAAAAGTAGGAGGACGAGGGGGGTTTTCGGCATTATAGTGGTGGCTGTACTTAGCAGTGCTATTTGGGCTGGTGGACTTGCCAATCAGCTAGGGTACAGTCGCGGAAATAAGCCAGAGAAGCTGGATTTCAAGGGCGGTTCTGATTACGCTGGACCGTTTGTGTTGTACTTTAGCTTCGGGTTGCTGGATGCCATGTTCCAGAGCCTTGTTTACTGGGTCATTGGAGCCTTGGCTAATGATTCTGAAACTCTAAGCAGGTATGTTGGATTCTACAAAGGAGTGCAGAGTGCTGGAGGAGCTGTTGCTTGGCAAGTTGATGCTCGCAATGTCTCGTTCCTTGGTCAATTGATTATGAATTGGGTTTTTACAACTGTGAGCTATCCGTTGTTGATTGTTCTGGTCTTGTTTGCTGTGAAGAATGAGGATGAAGAAGAGGAAATCACTAAGGCCAAGGAGGTTGCACCTAAGGAGGTTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

463

Amino Acids

50.16

Weight (kDa)

7.53

Isoelectric Point (pI)

30.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 20 - 169 2.7e-10 Major Facilitator Superfamily
UNC-93 PF05978 57 - 257 1.2e-17 Ion channel regulatory protein UNC-93
MFS_1 PF07690 59 - 405 2e-11 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 431
Acc36I ACCTGC 1 cut(s) 1155
AccB1I GGYRCC 3 cut(s) 371, 389, 416
AccBSI CCGCTC 1 cut(s) 206
AccI GTMKAC 2 cut(s) 174, 849
AccII CGCG 1 cut(s) 1011
AclWI GGATC 1 cut(s) 508
AcyI GRCGYC 5 cut(s) 372, 384, 390, 417, 428
AfaI GTAC 8 cut(s) 74, 645, 667, 680, 785, 957, 1004, 1076
AfiI CCNNNNNNNGG 2 cut(s) 403, 447
AgsI TTSAA 7 cut(s) 139, 487, 817, 838, 910, 1039, 1385
AjiI CACGTC 1 cut(s) 272
AjnI CCWGG 2 cut(s) 168, 348
AloI GAACNNNNNNTCC 2 cut(s) 1088, 1120
AluBI AGCT 8 cut(s) 14, 718, 906, 997, 1030, 1083, 1208, 1287
AluI AGCT 8 cut(s) 14, 718, 906, 997, 1030, 1083, 1208, 1287
Alw21I GWGCWC 2 cut(s) 528, 862
Alw26I GTCTC 2 cut(s) 278, 1243
Alw44I GTGCAC 1 cut(s) 858
AlwI GGATC 1 cut(s) 508
AoxI GGCC 5 cut(s) 40, 166, 394, 405, 1356
ApaLI GTGCAC 1 cut(s) 858
ApeKI GCWGC 4 cut(s) 123, 548, 739, 755
ArsI GACNNNNNNTTYG 2 cut(s) 817, 849
AspLEI GCGC 3 cut(s) 374, 392, 419
AspS9I GGNCC 4 cut(s) 40, 266, 405, 1061
AsuC2I CCSGG 2 cut(s) 129, 409
AsuHPI GGTGA 2 cut(s) 355, 820
AsuII TTCGAA 1 cut(s) 9
AvaII GGWCC 2 cut(s) 266, 1061
AxyI CCTNAGG 1 cut(s) 1374
BaeGI GKGCMC 1 cut(s) 862
BanI GGYRCC 3 cut(s) 371, 389, 416
BarI GAAGNNNNNNTAC 4 cut(s) 443, 475, 1067, 1099
Bbv12I GWGCWC 2 cut(s) 528, 862
BbvI GCAGC 4 cut(s) 110, 535, 726, 742
BccI CCATC 4 cut(s) 233, 368, 428, 859
BciT130I CCWGG 2 cut(s) 170, 350
BcnI CCSGG 2 cut(s) 129, 409
BcoDI GTCTC 2 cut(s) 278, 1243
BfaI CTAG 3 cut(s) 765, 828, 998
BfoI RGCGCY 3 cut(s) 375, 393, 420
BfuAI ACCTGC 1 cut(s) 1155
BisI GCNGC 8 cut(s) 83, 124, 244, 247, 549, 629, 740, 756
BlsI GCNGC 8 cut(s) 84, 125, 245, 248, 550, 630, 741, 757
BmcAI AGTACT 1 cut(s) 680
Bme1390I CCNGG 4 cut(s) 129, 170, 350, 409
Bme18I GGWCC 2 cut(s) 266, 1061
BmgBI CACGTC 1 cut(s) 272
BmgT120I GGNCC 4 cut(s) 40, 266, 405, 1061
BmiI GGNNCC 4 cut(s) 373, 391, 418, 1135
BmrFI CCNGG 4 cut(s) 129, 170, 350, 409
BmrI ACTGGG 2 cut(s) 862, 1132
BmsI GCATC 6 cut(s) 243, 258, 553, 726, 1087, 1216
BmuI ACTGGG 2 cut(s) 862, 1132
BpmI CTGGAG 1 cut(s) 1221
Bpu14I TTCGAA 1 cut(s) 9
BpuMI CCSGG 2 cut(s) 129, 409
BsaAI YACGTR 2 cut(s) 647, 783
BsaHI GRCGYC 5 cut(s) 372, 384, 390, 417, 428
BsaJI CCNNGG 6 cut(s) 127, 238, 262, 1137, 1246, 1359
BsaWI WCCGGW 1 cut(s) 69
BsaXI ACNNNNNCTCC 8 cut(s) 131, 156, 161, 182, 186, 212, 1194, 1224
Bsc4I CCNNNNNNNGG 2 cut(s) 403, 447
Bse118I RCCGGY 3 cut(s) 314, 368, 392
Bse1I ACTGG 3 cut(s) 787, 857, 1127
Bse21I CCTNAGG 1 cut(s) 1374
Bse3DI GCAATG 1 cut(s) 1240
BseBI CCWGG 2 cut(s) 170, 350
BseDI CCNNGG 6 cut(s) 127, 238, 262, 1137, 1246, 1359
BseGI GGATG 4 cut(s) 234, 258, 1102, 1339
BseLI CCNNNNNNNGG 2 cut(s) 403, 447
BseMI GCAATG 1 cut(s) 1240
BseMII CTCAG 1 cut(s) 534
BseNI ACTGG 3 cut(s) 787, 857, 1127
BseRI GAGGAG 3 cut(s) 177, 272, 1218
BseSI GKGCMC 1 cut(s) 862
BseXI GCAGC 4 cut(s) 110, 535, 726, 742
BseYI CCCAGC 1 cut(s) 869
BsgI GTGCAG 1 cut(s) 1211
Bsh1236I CGCG 1 cut(s) 1011
BshFI GGCC 5 cut(s) 42, 168, 396, 407, 1358
BshNI GGYRCC 3 cut(s) 371, 389, 416
BsiHKAI GWGCWC 2 cut(s) 528, 862
BsiSI CCGG 7 cut(s) 70, 129, 150, 315, 369, 393, 408
BslFI GGGAC 3 cut(s) 469, 670, 734
BslI CCNNNNNNNGG 2 cut(s) 403, 447
BsmAI GTCTC 2 cut(s) 278, 1243
BsmBI CGTCTC 1 cut(s) 278
BsmFI GGGAC 3 cut(s) 469, 670, 734
BsnI GGCC 5 cut(s) 42, 168, 396, 407, 1358
Bsp119I TTCGAA 1 cut(s) 9
Bsp1286I GDGCHC 2 cut(s) 528, 862
Bsp143I GATC 2 cut(s) 102, 513
BspANI GGCC 5 cut(s) 42, 168, 396, 407, 1358
BspCNI CTCAG 1 cut(s) 535
BspFNI CGCG 1 cut(s) 1011
BspHI TCATGA 1 cut(s) 423
BspLI GGNNCC 4 cut(s) 373, 391, 418, 1135
BspMI ACCTGC 1 cut(s) 1155
BspPI GGATC 1 cut(s) 508
BspT104I TTCGAA 1 cut(s) 9
BspT107I GGYRCC 3 cut(s) 371, 389, 416
BsrBI CCGCTC 1 cut(s) 206
BsrDI GCAATG 1 cut(s) 1240
BsrFI RCCGGY 3 cut(s) 314, 368, 392
BsrI ACTGG 3 cut(s) 787, 857, 1127
BssAI RCCGGY 3 cut(s) 314, 368, 392
BssECI CCNNGG 6 cut(s) 127, 238, 262, 1137, 1246, 1359
BssMI GATC 2 cut(s) 102, 513
BssNI GRCGYC 5 cut(s) 372, 384, 390, 417, 428
BssT1I CCWWGG 3 cut(s) 1137, 1246, 1359
Bst2UI CCWGG 2 cut(s) 170, 350
Bst4CI ACNGT 3 cut(s) 1007, 1065, 1282
Bst6I CTCTTC 1 cut(s) 1335
BstACI GRCGYC 5 cut(s) 372, 384, 390, 417, 428
BstBAI YACGTR 2 cut(s) 647, 783
BstBI TTCGAA 1 cut(s) 9
BstC8I GCNNGC 7 cut(s) 16, 292, 316, 370, 394, 618, 1231
BstDEI CTNAG 5 cut(s) 543, 959, 1160, 1353, 1374
BstF5I GGATG 4 cut(s) 234, 258, 1102, 1339
BstFNI CGCG 1 cut(s) 1011
BstH2I RGCGCY 3 cut(s) 375, 393, 420
BstHHI GCGC 3 cut(s) 374, 392, 419
BstKTI GATC 2 cut(s) 105, 516
BstMAI GTCTC 2 cut(s) 278, 1243
BstMBI GATC 2 cut(s) 102, 513
BstNI CCWGG 2 cut(s) 170, 350
BstNSI RCATGY 1 cut(s) 136
BstSCI CCNGG 4 cut(s) 127, 168, 348, 407
BstSLI GKGCMC 1 cut(s) 862
BstSNI TACGTA 1 cut(s) 783
BstUI CGCG 1 cut(s) 1011
BstV1I GCAGC 4 cut(s) 110, 535, 726, 742
Bsu36I CCTNAGG 1 cut(s) 1374
BsuRI GGCC 5 cut(s) 42, 168, 396, 407, 1358
BtrI CACGTC 1 cut(s) 272
BtsCI GGATG 4 cut(s) 234, 258, 1102, 1339
BtsI GCAGTG 1 cut(s) 970
BtsIMutI CAGTG 1 cut(s) 970
BveI ACCTGC 1 cut(s) 1155
Cac8I GCNNGC 7 cut(s) 16, 292, 316, 370, 394, 618, 1231
CciI TCATGA 1 cut(s) 423
CfoI GCGC 3 cut(s) 374, 392, 419
Cfr10I RCCGGY 3 cut(s) 314, 368, 392
Cfr13I GGNCC 4 cut(s) 40, 266, 405, 1061
CseI GACGC 2 cut(s) 373, 622
Csp6I GTAC 8 cut(s) 73, 644, 666, 679, 784, 956, 1003, 1075
CviAII CATG 6 cut(s) 133, 154, 424, 490, 583, 1102
CviQI GTAC 8 cut(s) 73, 644, 666, 679, 784, 956, 1003, 1075
DdeI CTNAG 5 cut(s) 543, 959, 1160, 1353, 1374
DinI GGCGCC 3 cut(s) 373, 391, 418
DpnI GATC 2 cut(s) 104, 515
DpnII GATC 2 cut(s) 102, 513
Eam1104I CTCTTC 1 cut(s) 1335
EarI CTCTTC 1 cut(s) 1335
EciI GGCGGA 1 cut(s) 174
Eco105I TACGTA 1 cut(s) 783
Eco130I CCWWGG 3 cut(s) 1137, 1246, 1359
Eco47I GGWCC 2 cut(s) 266, 1061
Eco81I CCTNAGG 1 cut(s) 1374
EcoRII CCWGG 2 cut(s) 168, 348
EcoT14I CCWWGG 3 cut(s) 1137, 1246, 1359
EgeI GGCGCC 3 cut(s) 373, 391, 418
EheI GGCGCC 3 cut(s) 373, 391, 418
ErhI CCWWGG 3 cut(s) 1137, 1246, 1359
Esp3I CGTCTC 1 cut(s) 278
FaeI CATG 6 cut(s) 136, 157, 427, 493, 586, 1105
FaqI GGGAC 3 cut(s) 469, 670, 734
FatI CATG 6 cut(s) 132, 153, 423, 489, 582, 1101
FauI CCCGC 2 cut(s) 60, 444
FblI GTMKAC 2 cut(s) 174, 849
Fnu4HI GCNGC 8 cut(s) 83, 124, 244, 247, 549, 629, 740, 756
FokI GGATG 4 cut(s) 221, 245, 1109, 1346
Fsp4HI GCNGC 8 cut(s) 83, 124, 244, 247, 549, 629, 740, 756
FspBI CTAG 3 cut(s) 765, 828, 998
GlaI GCGC 3 cut(s) 373, 391, 418
GluI GCNGC 8 cut(s) 83, 124, 244, 247, 549, 629, 740, 756
GsaI CCCAGC 1 cut(s) 873
GsuI CTGGAG 1 cut(s) 1221
HaeII RGCGCY 3 cut(s) 375, 393, 420
HaeIII GGCC 5 cut(s) 42, 168, 396, 407, 1358
HapII CCGG 7 cut(s) 70, 129, 150, 315, 369, 393, 408
HgaI GACGC 2 cut(s) 373, 622
HhaI GCGC 3 cut(s) 374, 392, 419
Hin1I GRCGYC 5 cut(s) 372, 384, 390, 417, 428
Hin1II CATG 6 cut(s) 136, 157, 427, 493, 586, 1105
Hin6I GCGC 3 cut(s) 372, 390, 417
HinP1I GCGC 3 cut(s) 372, 390, 417
HinfI GANTC 3 cut(s) 23, 1148, 1176
HpaII CCGG 7 cut(s) 70, 129, 150, 315, 369, 393, 408
HphI GGTGA 2 cut(s) 355, 820
Hpy166II GTNNAC 7 cut(s) 175, 269, 666, 850, 860, 983, 1120
Hpy188I TCNGA 6 cut(s) 28, 102, 612, 726, 1051, 1153
Hpy188III TCNNGA 2 cut(s) 424, 1108
Hpy8I GTNNAC 7 cut(s) 175, 269, 666, 850, 860, 983, 1120
Hpy99I CGWCG 3 cut(s) 23, 389, 656
HpyAV CCTTC 3 cut(s) 31, 229, 445
HpyCH4III ACNGT 3 cut(s) 1007, 1065, 1282
HpyCH4IV ACGT 6 cut(s) 271, 303, 428, 605, 646, 782
HpyCH4V TGCA 5 cut(s) 91, 566, 860, 1192, 1370
HpyF3I CTNAG 5 cut(s) 543, 959, 1160, 1353, 1374
HpySE526I ACGT 6 cut(s) 271, 303, 428, 605, 646, 782
Hsp92I GRCGYC 5 cut(s) 372, 384, 390, 417, 428
Hsp92II CATG 6 cut(s) 136, 157, 427, 493, 586, 1105
HspAI GCGC 3 cut(s) 372, 390, 417
KasI GGCGCC 3 cut(s) 371, 389, 416
KroI GCCGGC 3 cut(s) 314, 368, 392
KroNI GCCGGC 3 cut(s) 316, 370, 394
Kzo9I GATC 2 cut(s) 102, 513
LmnI GCTCC 3 cut(s) 299, 1133, 1205
Lsp1109I GCAGC 4 cut(s) 110, 535, 726, 742
LweI GCATC 6 cut(s) 243, 258, 553, 726, 1087, 1216
MaeI CTAG 3 cut(s) 765, 828, 998
MaeII ACGT 6 cut(s) 271, 303, 428, 605, 646, 782
MaeIII GTNAC 3 cut(s) 647, 688, 887
MalI GATC 2 cut(s) 104, 515
MbiI CCGCTC 1 cut(s) 206
MboI GATC 2 cut(s) 102, 513
MboII GAAGA 6 cut(s) 220, 475, 745, 1336, 1349, 1352
MfeI CAATTG 1 cut(s) 1253
MhlI GDGCHC 2 cut(s) 528, 862
MluCI AATT 5 cut(s) 529, 727, 817, 1253, 1264
Mly113I GGCGCC 3 cut(s) 372, 390, 417
MmeI TCCRAC 3 cut(s) 51, 213, 1153
MreI CGCCGGCG 1 cut(s) 368
MroNI GCCGGC 3 cut(s) 314, 368, 392
MseI TTAA 1 cut(s) 792
MslI CAYNNNNRTG 1 cut(s) 944
MspA1I CMGCKG 1 cut(s) 85
MspI CCGG 7 cut(s) 70, 129, 150, 315, 369, 393, 408
MspR9I CCNGG 4 cut(s) 129, 170, 350, 409
MunI CAATTG 1 cut(s) 1253
MvaI CCWGG 2 cut(s) 170, 350
MvnI CGCG 1 cut(s) 1011
NaeI GCCGGC 3 cut(s) 316, 370, 394
NarI GGCGCC 3 cut(s) 372, 390, 417
NciI CCSGG 2 cut(s) 129, 409
NdeII GATC 2 cut(s) 102, 513
NgoMIV GCCGGC 3 cut(s) 314, 368, 392
NlaIII CATG 6 cut(s) 136, 157, 427, 493, 586, 1105
NlaIV GGNNCC 4 cut(s) 373, 391, 418, 1135
NmeAIII GCCGAG 3 cut(s) 219, 360, 657
NmuCI GTSAC 2 cut(s) 647, 688
NspI RCATGY 1 cut(s) 136
NspV TTCGAA 1 cut(s) 9
PagI TCATGA 1 cut(s) 423
PcsI WCGNNNNNNNCGW 1 cut(s) 15
PdiI GCCGGC 3 cut(s) 316, 370, 394
PfeI GAWTC 3 cut(s) 23, 1148, 1176
PkrI GCNGC 8 cut(s) 84, 125, 245, 248, 550, 630, 741, 757
PluTI GGCGCC 3 cut(s) 375, 393, 420
Ppu21I YACGTR 2 cut(s) 647, 783
Psp6I CCWGG 2 cut(s) 168, 348
PspFI CCCAGC 1 cut(s) 869
PspGI CCWGG 2 cut(s) 168, 348
PspN4I GGNNCC 4 cut(s) 373, 391, 418, 1135
PspPI GGNCC 4 cut(s) 40, 266, 405, 1061
RsaI GTAC 8 cut(s) 74, 645, 667, 680, 785, 957, 1004, 1076
RsaNI GTAC 8 cut(s) 73, 644, 666, 679, 784, 956, 1003, 1075
RseI CAYNNNNRTG 1 cut(s) 944
SaqAI TTAA 1 cut(s) 792
SatI GCNGC 8 cut(s) 83, 124, 244, 247, 549, 629, 740, 756
Sau3AI GATC 2 cut(s) 102, 513
Sau96I GGNCC 4 cut(s) 40, 266, 405, 1061
ScaI AGTACT 1 cut(s) 680
ScrFI CCNGG 4 cut(s) 129, 170, 350, 409
SduI GDGCHC 2 cut(s) 528, 862
SfaNI GCATC 6 cut(s) 243, 258, 553, 726, 1087, 1216
SfoI GGCGCC 3 cut(s) 373, 391, 418
SfuI TTCGAA 1 cut(s) 9
SgrAI CRCCGGYG 1 cut(s) 368
SinI GGWCC 2 cut(s) 266, 1061
SmiMI CAYNNNNRTG 1 cut(s) 944
SnaBI TACGTA 1 cut(s) 783
Sse9I AATT 5 cut(s) 529, 727, 817, 1253, 1264
SspDI GGCGCC 3 cut(s) 371, 389, 416
SspMI CTAG 3 cut(s) 765, 828, 998
StyD4I CCNGG 4 cut(s) 127, 168, 348, 407
StyI CCWWGG 3 cut(s) 1137, 1246, 1359
TaaI ACNGT 3 cut(s) 1007, 1065, 1282
TaiI ACGT 6 cut(s) 274, 306, 431, 608, 649, 785
TaqI TCGA 4 cut(s) 9, 62, 683, 875
TaqII GACCGA 2 cut(s) 95, 254
TasI AATT 5 cut(s) 529, 727, 817, 1253, 1264
TatI WGTACW 4 cut(s) 665, 678, 955, 1074
TauI GCSGC 4 cut(s) 85, 246, 249, 631
TfiI GAWTC 3 cut(s) 23, 1148, 1176
Tru1I TTAA 1 cut(s) 792
Tru9I TTAA 1 cut(s) 792
TscAI CASTG 1 cut(s) 970
TseFI GTSAC 2 cut(s) 647, 688
TseI GCWGC 4 cut(s) 123, 548, 739, 755
Tsp45I GTSAC 2 cut(s) 647, 688
TspDTI ATGAA 3 cut(s) 571, 1277, 1350
TspGWI ACGGA 2 cut(s) 710, 1281
TspRI CASTG 1 cut(s) 970
VneI GTGCAC 1 cut(s) 858
VpaK11BI GGWCC 2 cut(s) 266, 1061
XceI RCATGY 1 cut(s) 136
XmiI GTMKAC 2 cut(s) 174, 849
XspI CTAG 3 cut(s) 765, 828, 998
ZraI GACGTC 1 cut(s) 429
ZrmI AGTACT 1 cut(s) 680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.