pycom01g23860

UNC93-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0010252
Physical Location & Seq
Forward (+)
21039971 .. 21040846
876 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g23860.1

Sequence Viewer

Length: 690 bp
ATGCTTCTTATAATCCCGGCTGCTTGGTCGAGCATTTTTTTCTACACCTACCTATTCATCAACGTCAATAAAGTTATGTTTAATCTGAGGACTAGAGGATTGAACAATGTGTTCTACTGGGGAGCGGAGATTTTTGGGTCCATTGGGATTGGATACGTTATGGATTTCAGCTTCAAAAGCAGGAGGACTAGGGGTTTCGTGGGCATTTCGGTTGTTGGTGTCCTCGGGACTGCAATTTGGATTGGCGGACTTGCCAACCAGCTCAACTACTCTCGAAGCGATTTGCCTGAGAAGTTGGATTTTAAGGACTCCAGCTCTGCTTTCGCAGGACCGTTCGTGTTGTATTTTAGTTTCGGGTTGCTTGATGCCATGTTCCAGAGCATGGTTTTCTGGGTCATTGGAGCCTTGGCTGATAACTCTGAAATTCTAAGCAGGTATGCTGGATTCTACAAGGGAATACAGAGTGCAGGGGCAGCAGTAGCTTGGCAAGTCGATACACGCAAGGCATCCTTCCTCTCCCAATTGGTTACGAATTTTGCGCTTTACACCGTGAGTTATCCGCTGCTGGTGGTTCTGATCTTGCTGGCCGTGAAGGATGAAGGTGAGGCTGATGTGGAGGAATTTACCAAGGGGAAGGTTGCTGAATTAGCAGATGAAATTAGTCATAAGCCATCCAAATGTTTGTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MFS_1 UNC-93

Protein Analysis

230

Amino Acids

25.36

Weight (kDa)

6.59

Isoelectric Point (pI)

29.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 11
Acc36I ACCTGC 1 cut(s) 423
AccB7I CCANNNNNTGG 1 cut(s) 382
AccBSI CCGCTC 1 cut(s) 125
AciI CCGC 3 cut(s) 125, 246, 560
AcoI YGGCCR 1 cut(s) 585
AcsI RAATTY 3 cut(s) 423, 532, 620
AfiI CCNNNNNNNGG 1 cut(s) 382
AgsI TTSAA 2 cut(s) 103, 175
AluBI AGCT 4 cut(s) 171, 262, 315, 482
AluI AGCT 4 cut(s) 171, 262, 315, 482
Ama87I CYCGRG 1 cut(s) 224
AoxI GGCC 1 cut(s) 585
ApeKI GCWGC 3 cut(s) 20, 473, 562
ApoI RAATTY 3 cut(s) 423, 532, 620
AspLEI GCGC 1 cut(s) 541
AspS9I GGNCC 2 cut(s) 138, 329
AsuC2I CCSGG 1 cut(s) 17
AsuHPI GGTGA 1 cut(s) 614
AvaI CYCGRG 1 cut(s) 224
AvaII GGWCC 2 cut(s) 138, 329
BbvI GCAGC 3 cut(s) 7, 485, 549
BccI CCATC 1 cut(s) 679
BceAI ACGGC 1 cut(s) 572
BciVI GTATCC 1 cut(s) 146
BcnI CCSGG 1 cut(s) 17
BfaI CTAG 2 cut(s) 93, 189
BfuAI ACCTGC 1 cut(s) 423
BfuI GTATCC 1 cut(s) 146
BisI GCNGC 3 cut(s) 21, 474, 563
BlsI GCNGC 3 cut(s) 22, 475, 564
Bme1390I CCNGG 1 cut(s) 17
Bme18I GGWCC 2 cut(s) 138, 329
BmeT110I CYCGRG 1 cut(s) 224
BmgT120I GGNCC 2 cut(s) 138, 329
BmiI GGNNCC 2 cut(s) 139, 403
BmrFI CCNGG 1 cut(s) 17
BmrI ACTGGG 1 cut(s) 127
BmsI GCATC 2 cut(s) 355, 515
BmuI ACTGGG 1 cut(s) 127
BpmI CTGGAG 1 cut(s) 295
BpuMI CCSGG 1 cut(s) 17
BsaJI CCNNGG 3 cut(s) 223, 405, 627
Bsc4I CCNNNNNNNGG 1 cut(s) 382
Bse1I ACTGG 1 cut(s) 122
BseDI CCNNGG 3 cut(s) 223, 405, 627
BseGI GGATG 3 cut(s) 506, 601, 671
BseLI CCNNNNNNNGG 1 cut(s) 382
BseMII CTCAG 2 cut(s) 77, 279
BseNI ACTGG 1 cut(s) 122
BseXI GCAGC 3 cut(s) 7, 485, 549
BsgI GTGCAG 1 cut(s) 486
BshFI GGCC 1 cut(s) 587
BsiHKCI CYCGRG 1 cut(s) 224
BsiSI CCGG 1 cut(s) 17
BslFI GGGAC 1 cut(s) 241
BslI CCNNNNNNNGG 1 cut(s) 382
BsmFI GGGAC 1 cut(s) 241
BsnI GGCC 1 cut(s) 587
BsoBI CYCGRG 1 cut(s) 224
Bsp143I GATC 1 cut(s) 576
BspACI CCGC 3 cut(s) 125, 246, 560
BspANI GGCC 1 cut(s) 587
BspCNI CTCAG 2 cut(s) 78, 280
BspLI GGNNCC 2 cut(s) 139, 403
BspMI ACCTGC 1 cut(s) 423
BsrBI CCGCTC 1 cut(s) 125
BsrI ACTGG 1 cut(s) 122
BssECI CCNNGG 3 cut(s) 223, 405, 627
BssMI GATC 1 cut(s) 576
BssT1I CCWWGG 2 cut(s) 405, 627
Bst4CI ACNGT 2 cut(s) 333, 550
BstC8I GCNNGC 1 cut(s) 585
BstDEI CTNAG 3 cut(s) 86, 288, 428
BstF5I GGATG 3 cut(s) 506, 601, 671
BstHHI GCGC 1 cut(s) 541
BstKTI GATC 1 cut(s) 579
BstMBI GATC 1 cut(s) 576
BstMWI GCNNNNNNNGC 4 cut(s) 177, 473, 479, 647
BstSCI CCNGG 1 cut(s) 15
BstV1I GCAGC 3 cut(s) 7, 485, 549
BsuI GTATCC 1 cut(s) 146
BsuRI GGCC 1 cut(s) 587
BtsCI GGATG 3 cut(s) 506, 601, 671
BveI ACCTGC 1 cut(s) 423
Cac8I GCNNGC 1 cut(s) 585
CfoI GCGC 1 cut(s) 541
Cfr13I GGNCC 2 cut(s) 138, 329
CviAII CATG 2 cut(s) 370, 382
DdeI CTNAG 3 cut(s) 86, 288, 428
DpnI GATC 1 cut(s) 578
DpnII GATC 1 cut(s) 576
EaeI YGGCCR 1 cut(s) 585
EciI GGCGGA 1 cut(s) 261
Eco130I CCWWGG 2 cut(s) 405, 627
Eco47I GGWCC 2 cut(s) 138, 329
Eco88I CYCGRG 1 cut(s) 224
EcoT14I CCWWGG 2 cut(s) 405, 627
ErhI CCWWGG 2 cut(s) 405, 627
FaeI CATG 2 cut(s) 373, 385
FaiI YATR 7 cut(s) 11, 77, 161, 371, 383, 438, 666
FalI AAGNNNNNCTT 2 cut(s) 494, 526
FaqI GGGAC 1 cut(s) 241
FatI CATG 2 cut(s) 369, 381
Fnu4HI GCNGC 3 cut(s) 21, 474, 563
FokI GGATG 3 cut(s) 493, 608, 658
Fsp4HI GCNGC 3 cut(s) 21, 474, 563
FspBI CTAG 2 cut(s) 93, 189
GlaI GCGC 1 cut(s) 540
GluI GCNGC 3 cut(s) 21, 474, 563
GsuI CTGGAG 1 cut(s) 295
HaeIII GGCC 1 cut(s) 587
HapII CCGG 1 cut(s) 17
HhaI GCGC 1 cut(s) 541
Hin1II CATG 2 cut(s) 373, 385
Hin6I GCGC 1 cut(s) 539
HinP1I GCGC 1 cut(s) 539
HinfI GANTC 2 cut(s) 308, 444
HpaII CCGG 1 cut(s) 17
HphI GGTGA 1 cut(s) 614
Hpy188I TCNGA 3 cut(s) 87, 421, 576
Hpy188III TCNNGA 3 cut(s) 226, 273, 376
HpyAV CCTTC 4 cut(s) 520, 586, 593, 628
HpyCH4III ACNGT 2 cut(s) 333, 550
HpyCH4IV ACGT 2 cut(s) 63, 156
HpyCH4V TGCA 2 cut(s) 233, 467
HpyF10VI GCNNNNNNNGC 4 cut(s) 177, 473, 479, 647
HpyF3I CTNAG 3 cut(s) 86, 288, 428
HpySE526I ACGT 2 cut(s) 63, 156
Hsp92II CATG 2 cut(s) 373, 385
HspAI GCGC 1 cut(s) 539
Kzo9I GATC 1 cut(s) 576
LmnI GCTCC 2 cut(s) 122, 401
Lsp1109I GCAGC 3 cut(s) 7, 485, 549
LweI GCATC 2 cut(s) 355, 515
MaeI CTAG 2 cut(s) 93, 189
MaeII ACGT 2 cut(s) 63, 156
MaeIII GTNAC 1 cut(s) 526
MalI GATC 1 cut(s) 578
MbiI CCGCTC 1 cut(s) 125
MboI GATC 1 cut(s) 576
MfeI CAATTG 1 cut(s) 521
MluCI AATT 7 cut(s) 234, 423, 521, 532, 620, 644, 657
MlyI GAGTC 1 cut(s) 302
MmeI TCCRAC 1 cut(s) 276
MnlI CCTC 7 cut(s) 81, 89, 177, 233, 524, 598, 610
MseI TTAA 3 cut(s) 81, 303, 688
MslI CAYNNNNRTG 1 cut(s) 676
MspA1I CMGCKG 1 cut(s) 562
MspI CCGG 1 cut(s) 17
MspR9I CCNGG 1 cut(s) 17
MunI CAATTG 1 cut(s) 521
MwoI GCNNNNNNNGC 4 cut(s) 177, 473, 479, 647
NciI CCSGG 1 cut(s) 17
NdeII GATC 1 cut(s) 576
NlaIII CATG 2 cut(s) 373, 385
NlaIV GGNNCC 2 cut(s) 139, 403
PfeI GAWTC 1 cut(s) 444
PflMI CCANNNNNTGG 1 cut(s) 382
PkrI GCNGC 3 cut(s) 22, 475, 564
PleI GAGTC 1 cut(s) 302
PpsI GAGTC 1 cut(s) 302
PsiI TTATAA 1 cut(s) 11
PspN4I GGNNCC 2 cut(s) 139, 403
PspPI GGNCC 2 cut(s) 138, 329
RseI CAYNNNNRTG 1 cut(s) 676
SaqAI TTAA 3 cut(s) 81, 303, 688
SatI GCNGC 3 cut(s) 21, 474, 563
Sau3AI GATC 1 cut(s) 576
Sau96I GGNCC 2 cut(s) 138, 329
SchI GAGTC 1 cut(s) 302
ScrFI CCNGG 1 cut(s) 17
SfaNI GCATC 2 cut(s) 355, 515
SinI GGWCC 2 cut(s) 138, 329
SmiMI CAYNNNNRTG 1 cut(s) 676
Sse9I AATT 7 cut(s) 234, 423, 521, 532, 620, 644, 657
SsiI CCGC 3 cut(s) 125, 246, 560
SspMI CTAG 2 cut(s) 93, 189
StyD4I CCNGG 1 cut(s) 15
StyI CCWWGG 2 cut(s) 405, 627
TaaI ACNGT 2 cut(s) 333, 550
TaiI ACGT 2 cut(s) 66, 159
TaqI TCGA 3 cut(s) 29, 274, 492
TasI AATT 7 cut(s) 234, 423, 521, 532, 620, 644, 657
TfiI GAWTC 1 cut(s) 444
Tru1I TTAA 3 cut(s) 81, 303, 688
Tru9I TTAA 3 cut(s) 81, 303, 688
TseI GCWGC 3 cut(s) 20, 473, 562
TspDTI ATGAA 3 cut(s) 46, 612, 669
Van91I CCANNNNNTGG 1 cut(s) 382
VpaK11BI GGWCC 2 cut(s) 138, 329
XapI RAATTY 3 cut(s) 423, 532, 620
XspI CTAG 2 cut(s) 93, 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.