MD01G1046500.v1.1

starch synthase 4, chloroplastic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0011846
Physical Location & Seq
Forward (+)
14747123 .. 14771000
23878 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1046500.v1.1.491

Sequence Viewer

Length: 1998 bp
ATGAAGGCGCTGATGAGCAGCTCGATCCTCCGCCCGTGGCAGTGGCAACCACCGCATCAGAAAACTCCAACTCCACTAGTTTGCTGCTCCGCCGTCAATGCCTCCTCCTCCTCCTCAGAAATGAAGTTTAAGGGCGATGAAAATGCGGAGTCCGTCTCTCGGGCCGAAGACATTTGGAAACTCTTCAGAGAAGCTCAGAAGAATATTCTGCAGTTAAACCAGCAACGTGTTAAGGCGGTAGAAGAACTCAACAAAATCAACAGAGAGAAAGAGCTGTTGGTGGATAGGATTGAGCAACTGGAGCTGGAAAAGCAGGCTGCCATTGCAAGGCCTCAAGATAGGGTAAGCTGTTGGGAGCTACTCTTTTGGATAGATTCAATGGTCCTCAATGGAATGGTTACCACCGTGGAGGCATCCGATTTGAGAAGGCTGGTTATGGATAACAAATTTAGCTTACCTGAAGTATTTAATGACAACCTGCAGAAAGGAGACACTGAGATTCTAGCTGAACTCCGTCACTTCTCTGAGAGAATCAAAAGGAATGGCTTTCACATTGTCCATGTATGCACGGAAATGGCACCCCTGGTCTCTGTCGGATCCTTGGCTTCATATGTGACAGGCTTGTCCTGTGCACTACAAAGGAAGGGAAATTTGGTGGAGGTGATACTTCCAAAGTTTTCAAGCTTGGACTTAAACGAAGTTCAAGGCCTAAAAGAAATTGAGGCAGAATGTTATTCATATTACAATGGTCAGTTGCATGGGAACAAAATCTGGACTGGCATTGTCTATGGCATTGGAGTTACTTTAATTCAACCAGTATACTACTCATCCTTTTTCAATCGTGAGAGGCTATATGGCTACTCAGATGACTTTGAAAGGTTTACCTATTTTTCCCGTGCTTCATTGGATTATATTGTAAAATCTGGAAAGCGTCCTGATGTGATACATATCCACAACTGGGAGACTGCTATTATTGGGCCACTTTTCTGGGATATTACTGTTAAACAGGGACTTGAAGGTACAAGAATTCTATTGACATGCCATGACCTCAACTCACAGTGTCTTGAGCATCCAGAGAAACTAGAGTTATGCGGACTCGATCCTGCTGGACTTCACCGTCCTGATCGTTTACAAGATAATACCAAGGCACATCTCGTTAATATCTTGAAGGGTGGAGTTGTTTACTCCAATAAAGTTGTCATTATGTCATCCATACTTTCAAAAGGCAGGGTTATTCAGAGTCTGAGTCATGGGCTGGATCCTACCTTAAACATTCACAAAAACAAAGTGATTATTGCTCCTTGTGGATTTGACAACTCCACCTGGGATCCATCCACGGACAACTTTCTTCCTGTACAGTATAATGCTAAGGATATGAAAGGGAAAACAGTCTGCAAAGCTGCATTGCAGCAGCACCTTGGGTTATCCGAGCATGCTTCTACTTTTCTTGTTGGATGCATCTTCTCTAAAGTATCAGATGTTGATCTGGAGAAGCTGAGGGAAATATTTTCGAAAACTAGTGGGATTGATGTACAGTACATCGTCATGGGGATTGGCAAAATATCAAGTGTAAACAAGTTGGGATCATTGCATGAACCCTTGAAGGATGCAAATGTACAATTCATAGATGGGAATGATGAAGCGTTATCACATTTGGTTTTCGCGGGATCTGATATTATCTTATGCCAATCTTTTCATGACCCTGGCCTTCAAGTTCCACTAAAAGCTTTAAAATACGGAGCTGCTCCAATTACAGTAAACTCCAACGACGAGGGGTTCGGGAACTTTGTCGAACATAACTACGAGACCACAAATTTCTCACGTTTCATCAGCTCTACGTTTGGAAATATGACTCTAAGCCAAGCCCTGGATGAAATTAAAAACAACCCGTCGAAGTGGAAGAGAAAGATAACGGATGCCATGGAAATGGACTTCTCGTGGGATGCTGAGTGCTGCGACATCCATACTTCTGCGTATACAGCCTTGAAAAATTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00500 ko01100 ko01110 ko02026 map00500 map01100 map01110 map02026
Pfam Domains
Protein Families
Glyco_transf_5

Protein Analysis

666

Amino Acids

74.81

Weight (kDa)

6.08

Isoelectric Point (pI)

39.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_5 PF08323 184 - 423 1.7e-36 Starch synthase catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 622, 1116
Acc36I ACCTGC 1 cut(s) 486
AccB1I GGYRCC 1 cut(s) 577
AccB7I CCANNNNNTGG 1 cut(s) 1867
AccI GTMKAC 2 cut(s) 819, 1976
AccII CGCG 1 cut(s) 1664
AciI CCGC 7 cut(s) 31, 53, 90, 146, 236, 1092, 1664
AcsI RAATTY 5 cut(s) 446, 649, 1026, 1813, 1990
AcuI CTGAAG 2 cut(s) 169, 480
AfaI GTAC 5 cut(s) 1021, 1356, 1533, 1538, 1617
AfiI CCNNNNNNNGG 4 cut(s) 159, 327, 958, 1867
AflIII ACRYGT 1 cut(s) 226
AhlI ACTAGT 2 cut(s) 76, 1517
AjnI CCWGG 4 cut(s) 582, 1322, 1702, 1866
AjuI GAANNNNNNNTTGG 4 cut(s) 260, 292, 635, 667
Alw21I GWGCWC 1 cut(s) 634
Alw26I GTCTC 5 cut(s) 160, 483, 592, 956, 1799
Alw44I GTGCAC 1 cut(s) 630
AlwNI CAGNNNCTG 1 cut(s) 1243
Ama87I CYCGRG 1 cut(s) 159
AoxI GGCC 5 cut(s) 162, 329, 706, 977, 1705
ApaLI GTGCAC 1 cut(s) 630
ApeKI GCWGC 8 cut(s) 18, 84, 317, 1400, 1408, 1411, 1742, 1953
ApoI RAATTY 5 cut(s) 446, 649, 1026, 1813, 1990
ArsI GACNNNNNNTTYG 2 cut(s) 1760, 1792
Asp700I GAANNNNTTC 1 cut(s) 182
AspLEI GCGC 1 cut(s) 10
AspS9I GGNCC 3 cut(s) 162, 382, 977
AsuHPI GGTGA 2 cut(s) 673, 1106
AsuII TTCGAA 1 cut(s) 1511
AvaI CYCGRG 1 cut(s) 159
AvaII GGWCC 1 cut(s) 382
BaeGI GKGCMC 1 cut(s) 634
BamHI GGATCC 3 cut(s) 596, 1258, 1327
BanI GGYRCC 1 cut(s) 577
BauI CACGAG 1 cut(s) 1936
BbsI GAAGAC 1 cut(s) 174
Bbv12I GWGCWC 1 cut(s) 634
BbvCI CCTCAGC 1 cut(s) 1496
BbvI GCAGC 8 cut(s) 30, 71, 304, 1387, 1420, 1423, 1729, 1940
BccI CCATC 2 cut(s) 1339, 1622
BceAI ACGGC 1 cut(s) 77
BcgI CGANNNNNNTGC 2 cut(s) 125, 159
BciT130I CCWGG 4 cut(s) 584, 1324, 1704, 1868
BcoDI GTCTC 5 cut(s) 160, 483, 592, 956, 1799
BcuI ACTAGT 2 cut(s) 76, 1517
BfaI CTAG 4 cut(s) 77, 503, 1082, 1518
BfmI CTRYAG 2 cut(s) 209, 479
BfoI RGCGCY 1 cut(s) 11
BfuAI ACCTGC 1 cut(s) 486
BisI GCNGC 8 cut(s) 19, 85, 318, 1401, 1409, 1412, 1743, 1954
BlsI GCNGC 8 cut(s) 20, 86, 319, 1402, 1410, 1413, 1744, 1955
Bme1390I CCNGG 4 cut(s) 584, 1324, 1704, 1868
Bme18I GGWCC 1 cut(s) 382
BmeT110I CYCGRG 1 cut(s) 159
BmgT120I GGNCC 3 cut(s) 162, 382, 977
BmiI GGNNCC 4 cut(s) 579, 598, 1260, 1329
BmrFI CCNGG 4 cut(s) 584, 1324, 1704, 1868
BmrI ACTGGG 1 cut(s) 967
BmsI GCATC 8 cut(s) 64, 422, 1078, 1445, 1467, 1597, 1906, 1933
BmuI ACTGGG 1 cut(s) 967
BpiI GAAGAC 1 cut(s) 174
BplI GAGNNNNNCTC 2 cut(s) 140, 172
BpmI CTGGAG 2 cut(s) 320, 1508
Bpu10I CCTNAGC 2 cut(s) 1368, 1496
Bpu14I TTCGAA 1 cut(s) 1511
BpuEI CTTGAG 2 cut(s) 318, 1085
BsaBI GATNNNNATC 2 cut(s) 947, 1482
BsaI GGTCTC 2 cut(s) 592, 1799
BsaXI ACNNNNNCTCC 2 cut(s) 55, 85
Bsc4I CCNNNNNNNGG 4 cut(s) 159, 327, 958, 1867
Bse1I ACTGG 4 cut(s) 303, 781, 815, 962
Bse3DI GCAATG 3 cut(s) 321, 1403, 1586
Bse8I GATNNNNATC 2 cut(s) 947, 1482
BseBI CCWGG 4 cut(s) 584, 1324, 1704, 1868
BseJI GATNNNNATC 2 cut(s) 947, 1482
BseLI CCNNNNNNNGG 4 cut(s) 159, 327, 958, 1867
BseMI GCAATG 3 cut(s) 321, 1403, 1586
BseMII CTCAG 8 cut(s) 129, 209, 486, 516, 876, 1235, 1487, 1938
BseNI ACTGG 4 cut(s) 303, 781, 815, 962
BseRI GAGGAG 4 cut(s) 94, 97, 100, 103
BseSI GKGCMC 1 cut(s) 634
BseXI GCAGC 8 cut(s) 30, 71, 304, 1387, 1420, 1423, 1729, 1940
Bsh1236I CGCG 1 cut(s) 1664
BshFI GGCC 5 cut(s) 164, 331, 708, 979, 1707
BshNI GGYRCC 1 cut(s) 577
BsiHKAI GWGCWC 1 cut(s) 634
BsiHKCI CYCGRG 1 cut(s) 159
BslFI GGGAC 1 cut(s) 1023
BslI CCNNNNNNNGG 4 cut(s) 159, 327, 958, 1867
BsmAI GTCTC 5 cut(s) 160, 483, 592, 956, 1799
BsmBI CGTCTC 1 cut(s) 160
BsmFI GGGAC 1 cut(s) 1023
BsnI GGCC 5 cut(s) 164, 331, 708, 979, 1707
Bso31I GGTCTC 2 cut(s) 592, 1799
BsoBI CYCGRG 1 cut(s) 159
Bsp119I TTCGAA 1 cut(s) 1511
Bsp1286I GDGCHC 1 cut(s) 634
Bsp1407I TGTACA 3 cut(s) 1354, 1531, 1615
Bsp143I GATC 9 cut(s) 24, 596, 1099, 1123, 1258, 1327, 1483, 1583, 1667
Bsp19I CCATGG 1 cut(s) 1920
BspACI CCGC 7 cut(s) 31, 53, 90, 146, 236, 1092, 1664
BspANI GGCC 5 cut(s) 164, 331, 708, 979, 1707
BspCNI CTCAG 8 cut(s) 128, 208, 487, 517, 875, 1236, 1488, 1939
BspFNI CGCG 1 cut(s) 1664
BspHI TCATGA 1 cut(s) 1696
BspLI GGNNCC 4 cut(s) 579, 598, 1260, 1329
BspMAI CTGCAG 2 cut(s) 213, 483
BspMI ACCTGC 1 cut(s) 486
BspT104I TTCGAA 1 cut(s) 1511
BspT107I GGYRCC 1 cut(s) 577
BspTNI GGTCTC 2 cut(s) 592, 1799
BsrDI GCAATG 3 cut(s) 321, 1403, 1586
BsrGI TGTACA 3 cut(s) 1354, 1531, 1615
BsrI ACTGG 4 cut(s) 303, 781, 815, 962
BssMI GATC 9 cut(s) 24, 596, 1099, 1123, 1258, 1327, 1483, 1583, 1667
BssNAI GTATAC 2 cut(s) 820, 1977
BssSI CACGAG 1 cut(s) 1936
BssT1I CCWWGG 4 cut(s) 600, 1143, 1417, 1920
Bst1107I GTATAC 2 cut(s) 820, 1977
Bst2BI CACGAG 1 cut(s) 1936
Bst2UI CCWGG 4 cut(s) 584, 1324, 1704, 1868
Bst4CI ACNGT 8 cut(s) 406, 1000, 1059, 1118, 1359, 1390, 1536, 1756
Bst6I CTCTTC 2 cut(s) 188, 1895
BstAUI TGTACA 3 cut(s) 1354, 1531, 1615
BstBI TTCGAA 1 cut(s) 1511
BstC8I GCNNGC 2 cut(s) 315, 1434
BstDSI CCRYGG 4 cut(s) 35, 405, 1335, 1920
BstEII GGTNACC 1 cut(s) 397
BstFNI CGCG 1 cut(s) 1664
BstH2I RGCGCY 1 cut(s) 11
BstHHI GCGC 1 cut(s) 10
BstKTI GATC 9 cut(s) 27, 599, 1102, 1126, 1261, 1330, 1486, 1586, 1670
BstMAI GTCTC 5 cut(s) 160, 483, 592, 956, 1799
BstMBI GATC 9 cut(s) 24, 596, 1099, 1123, 1258, 1327, 1483, 1583, 1667
BstMWI GCNNNNNNNGC 6 cut(s) 52, 98, 301, 310, 323, 1979
BstNI CCWGG 4 cut(s) 584, 1324, 1704, 1868
BstNSI RCATGY 2 cut(s) 1041, 1436
BstPI GGTNACC 1 cut(s) 397
BstSCI CCNGG 4 cut(s) 582, 1322, 1702, 1866
BstSFI CTRYAG 2 cut(s) 209, 479
BstSLI GKGCMC 1 cut(s) 634
BstUI CGCG 1 cut(s) 1664
BstV1I GCAGC 8 cut(s) 30, 71, 304, 1387, 1420, 1423, 1729, 1940
BstV2I GAAGAC 1 cut(s) 174
BstX2I RGATCY 4 cut(s) 596, 1258, 1327, 1667
BstXI CCANNNNNNTGG 2 cut(s) 987, 1927
BstYI RGATCY 4 cut(s) 596, 1258, 1327, 1667
BstZ17I GTATAC 2 cut(s) 820, 1977
BsuRI GGCC 5 cut(s) 164, 331, 708, 979, 1707
BtgI CCRYGG 4 cut(s) 35, 405, 1335, 1920
BtgZI GCGATG 1 cut(s) 150
BtsI GCAGTG 1 cut(s) 47
BtsIMutI CAGTG 3 cut(s) 47, 492, 1064
BveI ACCTGC 1 cut(s) 486
Cac8I GCNNGC 2 cut(s) 315, 1434
CaiI CAGNNNCTG 1 cut(s) 1243
CciI TCATGA 1 cut(s) 1696
CfoI GCGC 1 cut(s) 10
Cfr13I GGNCC 3 cut(s) 162, 382, 977
CseI GACGC 1 cut(s) 920
Csp6I GTAC 5 cut(s) 1020, 1355, 1532, 1537, 1616
CviQI GTAC 5 cut(s) 1020, 1355, 1532, 1537, 1616
DpnI GATC 9 cut(s) 26, 598, 1101, 1125, 1260, 1329, 1485, 1585, 1669
DpnII GATC 9 cut(s) 24, 596, 1099, 1123, 1258, 1327, 1483, 1583, 1667
DraI TTTAAA 1 cut(s) 1731
DrdI GACNNNNNNGTC 2 cut(s) 622, 1116
DseDI GACNNNNNNGTC 2 cut(s) 622, 1116
Eam1104I CTCTTC 2 cut(s) 188, 1895
EarI CTCTTC 2 cut(s) 188, 1895
EciI GGCGGA 2 cut(s) 20, 79
Eco130I CCWWGG 4 cut(s) 600, 1143, 1417, 1920
Eco147I AGGCCT 2 cut(s) 331, 708
Eco31I GGTCTC 2 cut(s) 592, 1799
Eco47I GGWCC 1 cut(s) 382
Eco57I CTGAAG 2 cut(s) 169, 480
Eco88I CYCGRG 1 cut(s) 159
Eco91I GGTNACC 1 cut(s) 397
EcoO65I GGTNACC 1 cut(s) 397
EcoRI GAATTC 1 cut(s) 1026
EcoRII CCWGG 4 cut(s) 582, 1322, 1702, 1866
EcoT14I CCWWGG 4 cut(s) 600, 1143, 1417, 1920
EcoT22I ATGCAT 1 cut(s) 1460
ErhI CCWWGG 4 cut(s) 600, 1143, 1417, 1920
Esp3I CGTCTC 1 cut(s) 160
FaqI GGGAC 1 cut(s) 1023
FauI CCCGC 1 cut(s) 1657
FauNDI CATATG 1 cut(s) 610
FblI GTMKAC 2 cut(s) 819, 1976
Fnu4HI GCNGC 8 cut(s) 19, 85, 318, 1401, 1409, 1412, 1743, 1954
Fsp4HI GCNGC 8 cut(s) 19, 85, 318, 1401, 1409, 1412, 1743, 1954
FspBI CTAG 4 cut(s) 77, 503, 1082, 1518
GlaI GCGC 1 cut(s) 9
GluI GCNGC 8 cut(s) 19, 85, 318, 1401, 1409, 1412, 1743, 1954
GsuI CTGGAG 2 cut(s) 320, 1508
HaeII RGCGCY 1 cut(s) 11
HaeIII GGCC 5 cut(s) 164, 331, 708, 979, 1707
HgaI GACGC 1 cut(s) 920
HhaI GCGC 1 cut(s) 10
Hin6I GCGC 1 cut(s) 8
HinP1I GCGC 1 cut(s) 8
HindIII AAGCTT 2 cut(s) 682, 1725
HinfI GANTC 8 cut(s) 149, 374, 499, 531, 1095, 1240, 1246, 1852
HphI GGTGA 2 cut(s) 673, 1106
Hpy166II GTNNAC 8 cut(s) 632, 820, 882, 1130, 1183, 1573, 1759, 1977
Hpy8I GTNNAC 8 cut(s) 632, 820, 882, 1130, 1183, 1573, 1759, 1977
Hpy99I CGWCG 2 cut(s) 1772, 1894
HpyAV CCTTC 6 cut(s) 420, 637, 1010, 1162, 1597, 1718
HpyCH4III ACNGT 8 cut(s) 406, 1000, 1059, 1118, 1359, 1390, 1536, 1756
HpyCH4IV ACGT 3 cut(s) 226, 1822, 1838
HpyF10VI GCNNNNNNNGC 6 cut(s) 52, 98, 301, 310, 323, 1979
HpySE526I ACGT 3 cut(s) 226, 1822, 1838
HspAI GCGC 1 cut(s) 8
Kzo9I GATC 9 cut(s) 24, 596, 1099, 1123, 1258, 1327, 1483, 1583, 1667
LmnI GCTCC 6 cut(s) 92, 301, 355, 1303, 1739, 1750
Lsp1109I GCAGC 8 cut(s) 30, 71, 304, 1387, 1420, 1423, 1729, 1940
LweI GCATC 8 cut(s) 64, 422, 1078, 1445, 1467, 1597, 1906, 1933
MaeI CTAG 4 cut(s) 77, 503, 1082, 1518
MaeII ACGT 3 cut(s) 226, 1822, 1838
MaeIII GTNAC 4 cut(s) 397, 515, 613, 799
MalI GATC 9 cut(s) 26, 598, 1101, 1125, 1260, 1329, 1485, 1585, 1669
MboI GATC 9 cut(s) 24, 596, 1099, 1123, 1258, 1327, 1483, 1583, 1667
MboII GAAGA 7 cut(s) 175, 179, 211, 254, 1340, 1453, 1912
MflI RGATCY 4 cut(s) 596, 1258, 1327, 1667
MhlI GDGCHC 1 cut(s) 634
MlyI GAGTC 5 cut(s) 158, 1089, 1249, 1255, 1846
MmeI TCCRAC 4 cut(s) 92, 574, 1432, 1788
Mph1103I ATGCAT 1 cut(s) 1460
MroXI GAANNNNTTC 1 cut(s) 182
MslI CAYNNNNRTG 3 cut(s) 572, 1544, 1925
MspR9I CCNGG 4 cut(s) 584, 1324, 1704, 1868
MvaI CCWGG 4 cut(s) 584, 1324, 1704, 1868
MvnI CGCG 1 cut(s) 1664
MwoI GCNNNNNNNGC 6 cut(s) 52, 98, 301, 310, 323, 1979
NcoI CCATGG 1 cut(s) 1920
NdeI CATATG 1 cut(s) 610
NdeII GATC 9 cut(s) 24, 596, 1099, 1123, 1258, 1327, 1483, 1583, 1667
NlaIV GGNNCC 4 cut(s) 579, 598, 1260, 1329
NmuCI GTSAC 2 cut(s) 515, 613
NsiI ATGCAT 1 cut(s) 1460
NspI RCATGY 2 cut(s) 1041, 1436
NspV TTCGAA 1 cut(s) 1511
PaeI GCATGC 1 cut(s) 1436
PagI TCATGA 1 cut(s) 1696
PceI AGGCCT 2 cut(s) 331, 708
PdmI GAANNNNTTC 1 cut(s) 182
PfeI GAWTC 3 cut(s) 374, 499, 531
PflMI CCANNNNNTGG 1 cut(s) 1867
PkrI GCNGC 8 cut(s) 20, 86, 319, 1402, 1410, 1413, 1744, 1955
PleI GAGTC 5 cut(s) 157, 1089, 1248, 1254, 1846
PpsI GAGTC 5 cut(s) 157, 1089, 1248, 1254, 1846
Psp6I CCWGG 4 cut(s) 582, 1322, 1702, 1866
PspEI GGTNACC 1 cut(s) 397
PspGI CCWGG 4 cut(s) 582, 1322, 1702, 1866
PspN4I GGNNCC 4 cut(s) 579, 598, 1260, 1329
PspPI GGNCC 3 cut(s) 162, 382, 977
PstI CTGCAG 2 cut(s) 213, 483
PstNI CAGNNNCTG 1 cut(s) 1243
PsuI RGATCY 4 cut(s) 596, 1258, 1327, 1667
RsaI GTAC 5 cut(s) 1021, 1356, 1533, 1538, 1617
RsaNI GTAC 5 cut(s) 1020, 1355, 1532, 1537, 1616
RseI CAYNNNNRTG 3 cut(s) 572, 1544, 1925
SatI GCNGC 8 cut(s) 19, 85, 318, 1401, 1409, 1412, 1743, 1954
Sau3AI GATC 9 cut(s) 24, 596, 1099, 1123, 1258, 1327, 1483, 1583, 1667
Sau96I GGNCC 3 cut(s) 162, 382, 977
SchI GAGTC 5 cut(s) 158, 1089, 1249, 1255, 1846
ScrFI CCNGG 4 cut(s) 584, 1324, 1704, 1868
SduI GDGCHC 1 cut(s) 634
SfaNI GCATC 8 cut(s) 64, 422, 1078, 1445, 1467, 1597, 1906, 1933
SfcI CTRYAG 2 cut(s) 209, 479
SfuI TTCGAA 1 cut(s) 1511
SinI GGWCC 1 cut(s) 382
SmiMI CAYNNNNRTG 3 cut(s) 572, 1544, 1925
SmlI CTYRAG 2 cut(s) 333, 1064
SmoI CTYRAG 2 cut(s) 333, 1064
SpeI ACTAGT 2 cut(s) 76, 1517
SphI GCATGC 1 cut(s) 1436
SseBI AGGCCT 2 cut(s) 331, 708
SsiI CCGC 7 cut(s) 31, 53, 90, 146, 236, 1092, 1664
SspI AATATT 2 cut(s) 205, 1506
SspMI CTAG 4 cut(s) 77, 503, 1082, 1518
StuI AGGCCT 2 cut(s) 331, 708
StyD4I CCNGG 4 cut(s) 582, 1322, 1702, 1866
StyI CCWWGG 4 cut(s) 600, 1143, 1417, 1920
TaaI ACNGT 8 cut(s) 406, 1000, 1059, 1118, 1359, 1390, 1536, 1756
TaiI ACGT 3 cut(s) 229, 1825, 1841
TaqI TCGA 5 cut(s) 23, 1098, 1511, 1791, 1892
TatI WGTACW 4 cut(s) 1354, 1531, 1536, 1615
TfiI GAWTC 3 cut(s) 374, 499, 531
TscAI CASTG 3 cut(s) 47, 499, 1064
TseFI GTSAC 2 cut(s) 515, 613
TseI GCWGC 8 cut(s) 18, 84, 317, 1400, 1408, 1411, 1742, 1953
Tsp45I GTSAC 2 cut(s) 515, 613
TspGWI ACGGA 6 cut(s) 142, 503, 584, 1352, 1752, 1928
TspRI CASTG 3 cut(s) 47, 499, 1064
Van91I CCANNNNNTGG 1 cut(s) 1867
VneI GTGCAC 1 cut(s) 630
VpaK11BI GGWCC 1 cut(s) 382
XapI RAATTY 5 cut(s) 446, 649, 1026, 1813, 1990
XceI RCATGY 2 cut(s) 1041, 1436
XmiI GTMKAC 2 cut(s) 819, 1976
XmnI GAANNNNTTC 1 cut(s) 182
XspI CTAG 4 cut(s) 77, 503, 1082, 1518
Zsp2I ATGCAT 1 cut(s) 1460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.