Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0021174

Physical Location & Seq

Genomic Coordinates Forward (+)

21208869 .. 21209309

Gene Structure 441 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1098100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 441 bp

ATGGCACACGGCTGCTTCCTCTGTCGTGGTGACGTTGAGGTAGACGTTTGTGCGCAATGCGTGAACGCCGCAATCCTAATGGTAGTCCGGAGCTGCCCCACAAGTAAACGGGTTGTATGGTGGTACGGCAAGAACTGTATGTTAAGGTACTCAGATGAGTCATTCTTTTCCATTGTGCAATACTTGCCTGATTTCATCGAAACGATGCTTTCCATCCAGCCAGTACCGAAAGTTAATGCAACACTATCAGATGAACCAACCGGATTTAATCACGTAATGAAGAGTATTTTGAATGATTTAGTCACCGAGATTTCCAAGGCTCCTTCCAAGTTTGCAACCAAGGAAGCGCATGTTGCAGGGTCGAATATATTACGCTGTGCAGCCTTGCGCAGTGCACGCAGGACCTCTCCACTGCAGATTGCAATTCCTGTCTTAGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

147

Amino Acids

16.11

Weight (kDa)

8.51

Isoelectric Point (pI)

51.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	3 - 52	4.2e-10	Salt stress response/antifungal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0021174)

Species	Orthologous Gene IDs
malus_domestica	MD01G1096800.v1.1 MD01G1098100.v1.1
pyrus_communis	pycom01g02380 pycom01g12210 pycom13g25000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	54, 389
AccI	GTMKAC	1 cut(s)	42
AccIII	TCCGGA	1 cut(s)	87
AciI	CCGC	1 cut(s)	69
AfaI	GTAC	3 cut(s)	125, 149, 225
AfiI	CCNNNNNNNGG	1 cut(s)	434
AgsI	TTSAA	1 cut(s)	292
AluBI	AGCT	1 cut(s)	93
AluI	AGCT	1 cut(s)	93
Alw21I	GWGCWC	1 cut(s)	397
Alw44I	GTGCAC	1 cut(s)	393
Aor13HI	TCCGGA	1 cut(s)	87
ApaLI	GTGCAC	1 cut(s)	393
ApeKI	GCWGC	3 cut(s)	12, 93, 380
AspLEI	GCGC	3 cut(s)	55, 349, 390
AspS9I	GGNCC	1 cut(s)	402
AsuHPI	GGTGA	2 cut(s)	41, 295
AvaII	GGWCC	1 cut(s)	402
BaeGI	GKGCMC	1 cut(s)	397
Bbv12I	GWGCWC	1 cut(s)	397
BbvI	GCAGC	2 cut(s)	80, 392
BccI	CCATC	1 cut(s)	221
BceAI	ACGGC	2 cut(s)	25, 142
BfmI	CTRYAG	1 cut(s)	413
BisI	GCNGC	4 cut(s)	13, 69, 94, 381
BlsI	GCNGC	4 cut(s)	14, 70, 95, 382
Bme18I	GGWCC	1 cut(s)	402
BmgT120I	GGNCC	1 cut(s)	402
BmiI	GGNNCC	1 cut(s)	321
BmsI	GCATC	1 cut(s)	195
BsaAI	YACGTR	1 cut(s)	274
BsaJI	CCNNGG	2 cut(s)	315, 339
BsaWI	WCCGGW	2 cut(s)	87, 260
Bsc4I	CCNNNNNNNGG	1 cut(s)	434
Bse1I	ACTGG	1 cut(s)	221
Bse3DI	GCAATG	1 cut(s)	62
BseAI	TCCGGA	1 cut(s)	87
BseDI	CCNNGG	2 cut(s)	315, 339
BseGI	GGATG	1 cut(s)	213
BseLI	CCNNNNNNNGG	1 cut(s)	434
BseMI	GCAATG	1 cut(s)	62
BseMII	CTCAG	1 cut(s)	165
BseNI	ACTGG	1 cut(s)	221
BseSI	GKGCMC	1 cut(s)	397
BseXI	GCAGC	2 cut(s)	80, 392
BsgI	GTGCAG	1 cut(s)	399
BsiHKAI	GWGCWC	1 cut(s)	397
BsiSI	CCGG	2 cut(s)	88, 261
BslI	CCNNNNNNNGG	1 cut(s)	434
Bsp1286I	GDGCHC	1 cut(s)	397
Bsp13I	TCCGGA	1 cut(s)	87
BspACI	CCGC	1 cut(s)	69
BspCNI	CTCAG	1 cut(s)	164
BspEI	TCCGGA	1 cut(s)	87
BspLI	GGNNCC	1 cut(s)	321
BspMAI	CTGCAG	1 cut(s)	417
BsrDI	GCAATG	1 cut(s)	62
BsrI	ACTGG	1 cut(s)	221
BssECI	CCNNGG	2 cut(s)	315, 339
BssT1I	CCWWGG	2 cut(s)	315, 339
Bst4CI	ACNGT	1 cut(s)	137
Bst6I	CTCTTC	1 cut(s)	275
BstAPI	GCANNNNNTGC	1 cut(s)	184
BstBAI	YACGTR	1 cut(s)	274
BstC8I	GCNNGC	1 cut(s)	397
BstDEI	CTNAG	2 cut(s)	151, 433
BstENI	CCTNNNNNAGG	1 cut(s)	432
BstF5I	GGATG	1 cut(s)	213
BstHHI	GCGC	3 cut(s)	55, 349, 390
BstMWI	GCNNNNNNNGC	3 cut(s)	184, 353, 396
BstNSI	RCATGY	1 cut(s)	353
BstSFI	CTRYAG	1 cut(s)	413
BstSLI	GKGCMC	1 cut(s)	397
BstV1I	GCAGC	2 cut(s)	80, 392
BtsCI	GGATG	1 cut(s)	213
BtsI	GCAGTG	2 cut(s)	397, 410
BtsIMutI	CAGTG	2 cut(s)	397, 410
Cac8I	GCNNGC	1 cut(s)	397
CfoI	GCGC	3 cut(s)	55, 349, 390
Cfr13I	GGNCC	1 cut(s)	402
Csp6I	GTAC	3 cut(s)	124, 148, 224
CviAII	CATG	1 cut(s)	350
CviJI	RGCY	5 cut(s)	12, 93, 220, 320, 383
CviKI_1	RGCY	5 cut(s)	12, 93, 220, 320, 383
CviQI	GTAC	3 cut(s)	124, 148, 224
DdeI	CTNAG	2 cut(s)	151, 433
Eam1104I	CTCTTC	1 cut(s)	275
EarI	CTCTTC	1 cut(s)	275
Eco130I	CCWWGG	2 cut(s)	315, 339
Eco47I	GGWCC	1 cut(s)	402
EcoNI	CCTNNNNNAGG	1 cut(s)	432
EcoO109I	RGGNCCY	1 cut(s)	402
EcoT14I	CCWWGG	2 cut(s)	315, 339
ErhI	CCWWGG	2 cut(s)	315, 339
FaeI	CATG	1 cut(s)	353
FaiI	YATR	4 cut(s)	118, 140, 351, 368
FatI	CATG	1 cut(s)	349
FblI	GTMKAC	1 cut(s)	42
Fnu4HI	GCNGC	4 cut(s)	13, 69, 94, 381
FokI	GGATG	1 cut(s)	200
Fsp4HI	GCNGC	4 cut(s)	13, 69, 94, 381
FspI	TGCGCA	2 cut(s)	54, 389
GlaI	GCGC	3 cut(s)	54, 348, 389
GluI	GCNGC	4 cut(s)	13, 69, 94, 381
HapII	CCGG	2 cut(s)	88, 261
HhaI	GCGC	3 cut(s)	55, 349, 390
Hin1II	CATG	1 cut(s)	353
Hin6I	GCGC	3 cut(s)	53, 347, 388
HinP1I	GCGC	3 cut(s)	53, 347, 388
HinfI	GANTC	1 cut(s)	158
HpaII	CCGG	2 cut(s)	88, 261
HphI	GGTGA	2 cut(s)	41, 295
Hpy166II	GTNNAC	4 cut(s)	43, 64, 107, 395
Hpy188I	TCNGA	2 cut(s)	154, 250
Hpy188III	TCNNGA	1 cut(s)	88
Hpy8I	GTNNAC	4 cut(s)	43, 64, 107, 395
HpyAV	CCTTC	1 cut(s)	333
HpyCH4III	ACNGT	1 cut(s)	137
HpyCH4IV	ACGT	3 cut(s)	33, 45, 273
HpyCH4V	TGCA	8 cut(s)	178, 239, 335, 356, 380, 395, 415, 422
HpyF10VI	GCNNNNNNNGC	3 cut(s)	184, 353, 396
HpyF3I	CTNAG	2 cut(s)	151, 433
HpySE526I	ACGT	3 cut(s)	33, 45, 273
Hsp92II	CATG	1 cut(s)	353
HspAI	GCGC	3 cut(s)	53, 347, 388
Kpn2I	TCCGGA	1 cut(s)	87
LmnI	GCTCC	2 cut(s)	90, 325
LpnPI	CCDG	7 cut(s)	101, 201, 230, 234, 274, 342, 385
Lsp1109I	GCAGC	2 cut(s)	80, 392
LweI	GCATC	1 cut(s)	195
MaeII	ACGT	3 cut(s)	33, 45, 273
MaeIII	GTNAC	2 cut(s)	29, 301
MboII	GAAGA	1 cut(s)	292
MhlI	GDGCHC	1 cut(s)	397
MluCI	AATT	1 cut(s)	423
MlyI	GAGTC	1 cut(s)	167
MnlI	CCTC	3 cut(s)	29, 31, 415
MroI	TCCGGA	1 cut(s)	87
MseI	TTAA	3 cut(s)	143, 234, 267
MspI	CCGG	2 cut(s)	88, 261
MwoI	GCNNNNNNNGC	3 cut(s)	184, 353, 396
NlaIII	CATG	1 cut(s)	353
NlaIV	GGNNCC	1 cut(s)	321
NmuCI	GTSAC	2 cut(s)	29, 301
NsbI	TGCGCA	2 cut(s)	54, 389
NspI	RCATGY	1 cut(s)	353
PkrI	GCNGC	4 cut(s)	14, 70, 95, 382
PleI	GAGTC	1 cut(s)	166
PpsI	GAGTC	1 cut(s)	166
Ppu21I	YACGTR	1 cut(s)	274
PpuMI	RGGWCCY	1 cut(s)	402
Psp5II	RGGWCCY	1 cut(s)	402
PspN4I	GGNNCC	1 cut(s)	321
PspPI	GGNCC	1 cut(s)	402
PspPPI	RGGWCCY	1 cut(s)	402
PstI	CTGCAG	1 cut(s)	417
RsaI	GTAC	3 cut(s)	125, 149, 225
RsaNI	GTAC	3 cut(s)	124, 148, 224
SaqAI	TTAA	3 cut(s)	143, 234, 267
SatI	GCNGC	4 cut(s)	13, 69, 94, 381
Sau96I	GGNCC	1 cut(s)	402
SchI	GAGTC	1 cut(s)	167
SduI	GDGCHC	1 cut(s)	397
SetI	ASST	7 cut(s)	36, 42, 48, 95, 149, 276, 407
SfaNI	GCATC	1 cut(s)	195
SfcI	CTRYAG	1 cut(s)	413
SinI	GGWCC	1 cut(s)	402
Sse9I	AATT	1 cut(s)	423
SsiI	CCGC	1 cut(s)	69
StyI	CCWWGG	2 cut(s)	315, 339
TaaI	ACNGT	1 cut(s)	137
TaiI	ACGT	3 cut(s)	36, 48, 276
TaqI	TCGA	2 cut(s)	198, 362
TasI	AATT	1 cut(s)	423
TauI	GCSGC	1 cut(s)	71
Tru1I	TTAA	3 cut(s)	143, 234, 267
Tru9I	TTAA	3 cut(s)	143, 234, 267
TscAI	CASTG	2 cut(s)	397, 417
TseFI	GTSAC	2 cut(s)	29, 301
TseI	GCWGC	3 cut(s)	12, 93, 380
Tsp45I	GTSAC	2 cut(s)	29, 301
TspDTI	ATGAA	3 cut(s)	184, 267, 293
TspRI	CASTG	2 cut(s)	397, 417
VneI	GTGCAC	1 cut(s)	393
VpaK11BI	GGWCC	1 cut(s)	402
XagI	CCTNNNNNAGG	1 cut(s)	432
XceI	RCATGY	1 cut(s)	353
XmiI	GTMKAC	1 cut(s)	42

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.