MD02G1059400.v1.1
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
4774840 .. 4776557
1718 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1059400.v1.1.491

Sequence Viewer

Length: 1413 bp
ATGGATGATTTCTTGAAGGAATTCTTCCCCAACATATACAGAAGGAAGCAACTGCACCTCAATGAGACAGACTACTGTAAATATAATAACCAAATTTTGACACTCTTCACATCCTGTTTGTACTTTGCGGGCCTCATTTCTACATTCGGAGCTTCTTATGTTACCCGAAACAAAGGAAGAAAGGCAAGCATTCTTGTTGGAGCAGTCAGCTTGTTTTTAGGAGCAGTCCTGAATGCTGCTGCAAAAAACATTGCAATGTTGATCATCGGACGAATATTTCTTGGTGTTGGCTTTGGATTTGGAAATCAGGCAGTTCCCTTGTATCTCCGGGAAATGGCTCCTGCGAAAATTCGAGCAGCAGTTAACCAACTTTTCCAGCTGACAGCTTTCTTAGGCATCCTGATCGCTAACTGGATAAATTATGGAACCGATAAAATCCATCCGTGGGGTTGGCGATTGTCTCTTGGATTAGCTACAGTCCCAGCAGTTCTTATGTTTGTTGGGGGTCTTTTTCTTCCTGAGACCCCAAATAGCCTTGTAGAGCAAGGCAGGTTAGAAGAGGCAAGAACTATACTTGAGAAAGTGAGAGGTACCAAAAAAGTTGATGCGGAGTTTGCCAACCTGGTTGATGCTAGCAATGTAGCTCGATCCATAAAGAACCCGTTTAGGAATCTACTCGCGCGAAAAAATCGCCCCCAATTGGTGATAGGGGCCTTGGGAATCCCTGCATTCCAACAGCTCACTGGCATGAGCTCAATCCTCGTCTATGCACCTGTCATATTTCAGAGCTTGGGATTTGGATCGGGGGCAGCTCTGTACTCATCTATCTTCACAAGTGGAGCATTTCTTGTTGCTACATTCATTTCAATTGGATATGTTGATATGTTTGGTAGAAGAGCTTCCTTCTTAGCAGCTGGAACTGAAATGATATGCTGCTTGGTTGCTGTGACCATAACCCTAGCCCTGAAGTTTGGACAAGGAGAAGTCCTCCCAAAAGGGATAGGAATCTTCCTTGTTATCGTCATATGCATATTTGTTTTGGCTTATGGAAGGTCATGGCGTCCTTTGGCGTGGTTAGTTCCAAGTGAGCTGTTTCCTTTAGAGATGAGATCAGCTGGACTGAGTGTCGTTTTCTGTGTCAATCTCCTCTTCACGGCTTTGATAGCGCAGGGCTTCCTCGCGGGGCTTTGCCATCTTCAATATGGTATTTTTCTGCTGTTTGCGGGTTTGATAATCATCATGAATACCTTCATCTTCTTCCTCTTGCCAGAGACAAAGCAAGTCCCCATAGAAGAAATATATCTTCTGTTTCAGAAACATTGGTTTTGGAAAAGAATAGTAGGAGATGGGGAGCAAATTGGACCCAATGGGAAGCCAAGCCAACCAGATGGGAAGTCTGGAGCACAAGTTTAG

Protein Analysis

471

Amino Acids

51.65

Weight (kDa)

9.54

Isoelectric Point (pI)

33.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 22 - 435 9.5e-103 Sugar (and other) transporter
MFS_1 PF07690 33 - 384 7.9e-19 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011228)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 540
Acc65I GGTACC 1 cut(s) 590
AccB1I GGYRCC 1 cut(s) 590
AccII CGCG 3 cut(s) 680, 682, 1181
AciI CCGC 4 cut(s) 128, 608, 1181, 1223
AclWI GGATC 2 cut(s) 642, 808
AcsI RAATTY 3 cut(s) 20, 93, 348
AcuI CTGAAG 1 cut(s) 986
AcyI GRCGYC 1 cut(s) 1060
AfaI GTAC 3 cut(s) 122, 592, 818
AfiI CCNNNNNNNGG 4 cut(s) 334, 445, 700, 1153
AgsI TTSAA 3 cut(s) 16, 867, 1199
AhdI GACNNNNNGTC 1 cut(s) 1124
AjnI CCWGG 1 cut(s) 621
Alw21I GWGCWC 2 cut(s) 755, 1405
Alw26I GTCTC 4 cut(s) 59, 465, 515, 1265
AlwI GGATC 2 cut(s) 642, 808
AoxI GGCC 2 cut(s) 130, 711
ApeKI GCWGC 6 cut(s) 236, 239, 356, 809, 911, 933
ApoI RAATTY 3 cut(s) 20, 93, 348
Asp700I GAANNNNTTC 3 cut(s) 20, 898, 1247
Asp718I GGTACC 1 cut(s) 590
AspLEI GCGC 2 cut(s) 682, 1168
AspS9I GGNCC 3 cut(s) 130, 711, 1361
AsuC2I CCSGG 1 cut(s) 329
AsuHPI GGTGA 1 cut(s) 715
AsuNHI GCTAGC 1 cut(s) 632
AvaII GGWCC 1 cut(s) 1361
BanI GGYRCC 1 cut(s) 590
BanII GRGCYC 1 cut(s) 755
BarI GAAGNNNNNNTAC 2 cut(s) 883, 915
Bbv12I GWGCWC 2 cut(s) 755, 1405
BbvI GCAGC 6 cut(s) 223, 226, 368, 821, 920, 923
BccI CCATC 4 cut(s) 447, 1200, 1340, 1382
BceAI ACGGC 1 cut(s) 1170
BcgI CGANNNNNNTGC 2 cut(s) 385, 419
BciT130I CCWGG 1 cut(s) 623
BclI TGATCA 1 cut(s) 261
BcnI CCSGG 1 cut(s) 329
BcoDI GTCTC 4 cut(s) 59, 465, 515, 1265
BfaI CTAG 2 cut(s) 633, 959
BfmI CTRYAG 1 cut(s) 474
BfuAI ACCTGC 1 cut(s) 540
BisI GCNGC 6 cut(s) 237, 240, 357, 810, 912, 934
BlsI GCNGC 6 cut(s) 238, 241, 358, 811, 913, 935
Bme1390I CCNGG 2 cut(s) 329, 623
Bme18I GGWCC 1 cut(s) 1361
BmeRI GACNNNNNGTC 1 cut(s) 1124
BmgT120I GGNCC 3 cut(s) 130, 711, 1361
BmiI GGNNCC 5 cut(s) 339, 427, 592, 712, 1363
BmrFI CCNGG 2 cut(s) 329, 623
BmsI GCATC 3 cut(s) 405, 595, 619
BmtI GCTAGC 1 cut(s) 636
BplI GAGNNNNNCTC 2 cut(s) 972, 1004
BpuEI CTTGAG 1 cut(s) 596
BpuMI CCSGG 1 cut(s) 329
BsaBI GATNNNNATC 3 cut(s) 799, 1004, 1235
BsaHI GRCGYC 1 cut(s) 1060
BsaI GGTCTC 1 cut(s) 515
BsaJI CCNNGG 2 cut(s) 443, 714
BsaXI ACNNNNNCTCC 1 cut(s) 1392
Bsc4I CCNNNNNNNGG 4 cut(s) 334, 445, 700, 1153
Bse1I ACTGG 2 cut(s) 416, 748
Bse3DI GCAATG 3 cut(s) 249, 261, 643
Bse8I GATNNNNATC 3 cut(s) 799, 1004, 1235
BseBI CCWGG 1 cut(s) 623
BseDI CCNNGG 2 cut(s) 443, 714
BseGI GGATG 4 cut(s) 10, 110, 396, 439
BseJI GATNNNNATC 3 cut(s) 799, 1004, 1235
BseLI CCNNNNNNNGG 4 cut(s) 334, 445, 700, 1153
BseMI GCAATG 3 cut(s) 249, 261, 643
BseMII CTCAG 2 cut(s) 510, 1112
BseNI ACTGG 2 cut(s) 416, 748
BseRI GAGGAG 1 cut(s) 1136
BseXI GCAGC 6 cut(s) 223, 226, 368, 821, 920, 923
BseYI CCCAGC 1 cut(s) 481
BsgI GTGCAG 1 cut(s) 38
Bsh1236I CGCG 3 cut(s) 680, 682, 1181
BshFI GGCC 2 cut(s) 132, 713
BshNI GGYRCC 1 cut(s) 590
BsiHKAI GWGCWC 2 cut(s) 755, 1405
BsiSI CCGG 1 cut(s) 328
BslFI GGGAC 2 cut(s) 464, 1268
BslI CCNNNNNNNGG 4 cut(s) 334, 445, 700, 1153
BsmAI GTCTC 4 cut(s) 59, 465, 515, 1265
BsmFI GGGAC 2 cut(s) 464, 1268
BsmI GAATGC 3 cut(s) 189, 238, 728
BsnI GGCC 2 cut(s) 132, 713
Bso31I GGTCTC 1 cut(s) 515
Bsp1286I GDGCHC 2 cut(s) 755, 1405
Bsp143I GATC 5 cut(s) 261, 402, 647, 800, 1109
BspACI CCGC 4 cut(s) 128, 608, 1181, 1223
BspANI GGCC 2 cut(s) 132, 713
BspCNI CTCAG 2 cut(s) 511, 1113
BspFNI CGCG 3 cut(s) 680, 682, 1181
BspHI TCATGA 1 cut(s) 1239
BspLI GGNNCC 5 cut(s) 339, 427, 592, 712, 1363
BspMI ACCTGC 1 cut(s) 540
BspOI GCTAGC 1 cut(s) 636
BspPI GGATC 2 cut(s) 642, 808
BspQI GCTCTTC 1 cut(s) 889
BspT107I GGYRCC 1 cut(s) 590
BspTNI GGTCTC 1 cut(s) 515
BsrDI GCAATG 3 cut(s) 249, 261, 643
BsrI ACTGG 2 cut(s) 416, 748
BssECI CCNNGG 2 cut(s) 443, 714
BssMI GATC 5 cut(s) 261, 402, 647, 800, 1109
BssNI GRCGYC 1 cut(s) 1060
BssT1I CCWWGG 1 cut(s) 714
Bst2UI CCWGG 1 cut(s) 623
Bst4CI ACNGT 2 cut(s) 77, 478
Bst6I CTCTTC 4 cut(s) 110, 552, 889, 1154
BstACI GRCGYC 1 cut(s) 1060
BstC8I GCNNGC 3 cut(s) 130, 187, 634
BstDEI CTNAG 4 cut(s) 391, 519, 907, 1121
BstDSI CCRYGG 1 cut(s) 443
BstF5I GGATG 4 cut(s) 10, 110, 396, 439
BstFNI CGCG 3 cut(s) 680, 682, 1181
BstHHI GCGC 2 cut(s) 682, 1168
BstKTI GATC 5 cut(s) 264, 405, 650, 803, 1112
BstMAI GTCTC 4 cut(s) 59, 465, 515, 1265
BstMBI GATC 5 cut(s) 261, 402, 647, 800, 1109
BstMWI GCNNNNNNNGC 2 cut(s) 614, 1163
BstNI CCWGG 1 cut(s) 623
BstSCI CCNGG 2 cut(s) 327, 621
BstSFI CTRYAG 1 cut(s) 474
BstUI CGCG 3 cut(s) 680, 682, 1181
BstV1I GCAGC 6 cut(s) 223, 226, 368, 821, 920, 923
BstXI CCANNNNNNTGG 1 cut(s) 1388
BsuRI GGCC 2 cut(s) 132, 713
BtgI CCRYGG 1 cut(s) 443
BtsCI GGATG 4 cut(s) 10, 110, 396, 439
BtsIMutI CAGTG 1 cut(s) 741
BveI ACCTGC 1 cut(s) 540
Cac8I GCNNGC 3 cut(s) 130, 187, 634
CciI TCATGA 1 cut(s) 1239
CfoI GCGC 2 cut(s) 682, 1168
Cfr13I GGNCC 3 cut(s) 130, 711, 1361
CseI GACGC 1 cut(s) 1049
CsiI ACCWGGT 1 cut(s) 621
Csp6I GTAC 3 cut(s) 121, 591, 817
CviAII CATG 3 cut(s) 748, 1056, 1240
CviQI GTAC 3 cut(s) 121, 591, 817
DdeI CTNAG 4 cut(s) 391, 519, 907, 1121
DpnI GATC 5 cut(s) 263, 404, 649, 802, 1111
DpnII GATC 5 cut(s) 261, 402, 647, 800, 1109
DriI GACNNNNNGTC 1 cut(s) 1124
Eam1104I CTCTTC 4 cut(s) 110, 552, 889, 1154
Eam1105I GACNNNNNGTC 1 cut(s) 1124
EarI CTCTTC 4 cut(s) 110, 552, 889, 1154
Ecl136II GAGCTC 1 cut(s) 753
Eco130I CCWWGG 1 cut(s) 714
Eco24I GRGCYC 1 cut(s) 755
Eco31I GGTCTC 1 cut(s) 515
Eco47I GGWCC 1 cut(s) 1361
Eco53kI GAGCTC 1 cut(s) 753
Eco57I CTGAAG 1 cut(s) 986
EcoICRI GAGCTC 1 cut(s) 753
EcoO109I RGGNCCY 1 cut(s) 711
EcoRI GAATTC 1 cut(s) 20
EcoRII CCWGG 1 cut(s) 621
EcoT14I CCWWGG 1 cut(s) 714
EcoT22I ATGCAT 1 cut(s) 1031
EcoT38I GRGCYC 1 cut(s) 755
ErhI CCWWGG 1 cut(s) 714
FaeI CATG 3 cut(s) 751, 1059, 1243
FalI AAGNNNNNCTT 2 cut(s) 8, 40
FaqI GGGAC 2 cut(s) 464, 1268
FatI CATG 3 cut(s) 747, 1055, 1239
FauI CCCGC 3 cut(s) 121, 1174, 1216
FauNDI CATATG 1 cut(s) 1025
FbaI TGATCA 1 cut(s) 261
Fnu4HI GCNGC 6 cut(s) 237, 240, 357, 810, 912, 934
FokI GGATG 4 cut(s) 17, 97, 383, 426
FriOI GRGCYC 1 cut(s) 755
Fsp4HI GCNGC 6 cut(s) 237, 240, 357, 810, 912, 934
FspBI CTAG 2 cut(s) 633, 959
GlaI GCGC 2 cut(s) 681, 1167
GluI GCNGC 6 cut(s) 237, 240, 357, 810, 912, 934
GsaI CCCAGC 1 cut(s) 485
HaeIII GGCC 2 cut(s) 132, 713
HapII CCGG 1 cut(s) 328
HgaI GACGC 1 cut(s) 1049
HhaI GCGC 2 cut(s) 682, 1168
Hin1I GRCGYC 1 cut(s) 1060
Hin1II CATG 3 cut(s) 751, 1059, 1243
Hin6I GCGC 2 cut(s) 680, 1166
HinP1I GCGC 2 cut(s) 680, 1166
HincII GTYRAC 1 cut(s) 364
HindII GTYRAC 1 cut(s) 364
HinfI GANTC 3 cut(s) 670, 720, 1005
HpaI GTTAAC 1 cut(s) 364
HpaII CCGG 1 cut(s) 328
HphI GGTGA 1 cut(s) 715
Hpy166II GTNNAC 1 cut(s) 364
Hpy188I TCNGA 4 cut(s) 149, 269, 786, 1314
Hpy188III TCNNGA 6 cut(s) 13, 229, 400, 518, 1240, 1398
Hpy8I GTNNAC 1 cut(s) 364
HpyAV CCTTC 5 cut(s) 10, 36, 913, 1044, 1258
HpyCH4III ACNGT 2 cut(s) 77, 478
HpyCH4V TGCA 6 cut(s) 55, 242, 254, 728, 770, 1029
HpyF10VI GCNNNNNNNGC 2 cut(s) 614, 1163
HpyF3I CTNAG 4 cut(s) 391, 519, 907, 1121
Hsp92I GRCGYC 1 cut(s) 1060
Hsp92II CATG 3 cut(s) 751, 1059, 1243
HspAI GCGC 2 cut(s) 680, 1166
KpnI GGTACC 1 cut(s) 594
Ksp22I TGATCA 1 cut(s) 261
KspAI GTTAAC 1 cut(s) 364
Kzo9I GATC 5 cut(s) 261, 402, 647, 800, 1109
LguI GCTCTTC 1 cut(s) 889
LmnI GCTCC 7 cut(s) 149, 200, 221, 343, 839, 1351, 1400
Lsp1109I GCAGC 6 cut(s) 223, 226, 368, 821, 920, 923
LweI GCATC 3 cut(s) 405, 595, 619
MabI ACCWGGT 1 cut(s) 621
MaeI CTAG 2 cut(s) 633, 959
MaeIII GTNAC 2 cut(s) 160, 946
MalI GATC 5 cut(s) 263, 404, 649, 802, 1111
MboI GATC 5 cut(s) 261, 402, 647, 800, 1109
MfeI CAATTG 2 cut(s) 698, 867
MhlI GDGCHC 2 cut(s) 755, 1405
MluCI AATT 7 cut(s) 20, 93, 348, 418, 698, 867, 1356
MmeI TCCRAC 2 cut(s) 178, 757
MnlI CCTC 9 cut(s) 68, 143, 553, 581, 770, 998, 1157, 1187, 1271
Mph1103I ATGCAT 1 cut(s) 1031
MroXI GAANNNNTTC 3 cut(s) 20, 898, 1247
MseI TTAA 1 cut(s) 363
MslI CAYNNNNRTG 3 cut(s) 60, 254, 746
MspA1I CMGCKG 3 cut(s) 379, 914, 1115
MspI CCGG 1 cut(s) 328
MspR9I CCNGG 2 cut(s) 329, 623
MunI CAATTG 2 cut(s) 698, 867
Mva1269I GAATGC 3 cut(s) 189, 238, 728
MvaI CCWGG 1 cut(s) 623
MvnI CGCG 3 cut(s) 680, 682, 1181
MwoI GCNNNNNNNGC 2 cut(s) 614, 1163
NciI CCSGG 1 cut(s) 329
NdeI CATATG 1 cut(s) 1025
NdeII GATC 5 cut(s) 261, 402, 647, 800, 1109
NheI GCTAGC 1 cut(s) 632
NlaIII CATG 3 cut(s) 751, 1059, 1243
NlaIV GGNNCC 5 cut(s) 339, 427, 592, 712, 1363
NmuCI GTSAC 1 cut(s) 946
NsiI ATGCAT 1 cut(s) 1031
PagI TCATGA 1 cut(s) 1239
PciSI GCTCTTC 1 cut(s) 889
PctI GAATGC 3 cut(s) 189, 238, 728
PdmI GAANNNNTTC 3 cut(s) 20, 898, 1247
PfeI GAWTC 3 cut(s) 670, 720, 1005
PfoI TCCNGGA 1 cut(s) 327
PkrI GCNGC 6 cut(s) 238, 241, 358, 811, 913, 935
Psp124BI GAGCTC 1 cut(s) 755
Psp6I CCWGG 1 cut(s) 621
PspFI CCCAGC 1 cut(s) 481
PspGI CCWGG 1 cut(s) 621
PspN4I GGNNCC 5 cut(s) 339, 427, 592, 712, 1363
PspPI GGNCC 3 cut(s) 130, 711, 1361
PvuII CAGCTG 3 cut(s) 379, 914, 1115
RsaI GTAC 3 cut(s) 122, 592, 818
RsaNI GTAC 3 cut(s) 121, 591, 817
RseI CAYNNNNRTG 3 cut(s) 60, 254, 746
SacI GAGCTC 1 cut(s) 755
SapI GCTCTTC 1 cut(s) 889
SaqAI TTAA 1 cut(s) 363
SatI GCNGC 6 cut(s) 237, 240, 357, 810, 912, 934
Sau3AI GATC 5 cut(s) 261, 402, 647, 800, 1109
Sau96I GGNCC 3 cut(s) 130, 711, 1361
ScrFI CCNGG 2 cut(s) 329, 623
SduI GDGCHC 2 cut(s) 755, 1405
SexAI ACCWGGT 1 cut(s) 621
SfaNI GCATC 3 cut(s) 405, 595, 619
SfcI CTRYAG 1 cut(s) 474
SinI GGWCC 1 cut(s) 1361
SmiMI CAYNNNNRTG 3 cut(s) 60, 254, 746
SmlI CTYRAG 1 cut(s) 575
SmoI CTYRAG 1 cut(s) 575
Sse9I AATT 7 cut(s) 20, 93, 348, 418, 698, 867, 1356
SsiI CCGC 4 cut(s) 128, 608, 1181, 1223
SspI AATATT 1 cut(s) 276
SspMI CTAG 2 cut(s) 633, 959
SstI GAGCTC 1 cut(s) 755
StyD4I CCNGG 2 cut(s) 327, 621
StyI CCWWGG 1 cut(s) 714
TaaI ACNGT 2 cut(s) 77, 478
TaqI TCGA 2 cut(s) 352, 646
TasI AATT 7 cut(s) 20, 93, 348, 418, 698, 867, 1356
TatI WGTACW 2 cut(s) 120, 816
TfiI GAWTC 3 cut(s) 670, 720, 1005
Tru1I TTAA 1 cut(s) 363
Tru9I TTAA 1 cut(s) 363
TscAI CASTG 1 cut(s) 748
TseFI GTSAC 1 cut(s) 946
TseI GCWGC 6 cut(s) 236, 239, 356, 809, 911, 933
Tsp45I GTSAC 1 cut(s) 946
TspDTI ATGAA 3 cut(s) 850, 1240, 1256
TspGWI ACGGA 1 cut(s) 432
TspRI CASTG 1 cut(s) 748
VpaK11BI GGWCC 1 cut(s) 1361
XapI RAATTY 3 cut(s) 20, 93, 348
XcmI CCANNNNNNNNNTGG 2 cut(s) 740, 1199
XmnI GAANNNNTTC 3 cut(s) 20, 898, 1247
XspI CTAG 2 cut(s) 633, 959
Zsp2I ATGCAT 1 cut(s) 1031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.