Rmu_co8499403.1_g000001
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8499403.1
Physical Location & Seq
Forward (+)
733 .. 2882
2150 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8499403.1_g000001.1.cds

Sequence Viewer

Length: 1312 bp
atggcaggagggtttggaggagcagaagttgtacatgagagggctcaacactatgagcatagaattacttggtatttcatctttacttgcattattgcagctcttggaggctctctctttggctatgatcttggtgtttcaggtggagtgacttccatggatgatttcttgaaggaattcttccctaaaatccatagaaggaaacaattacacctcaatgagacagattactgtaaatacgataaccagatcctgacactcttcacatcctctttgtactttgctggcctgatttcaacatttggagcttcctatgttacccgaagcaagggcaggaaagccagcatcattgttggatcaatcagcttcttcttaggagcggtcctcaatgcttctgctaaaaacatattaatgttgatcttgggacgaatatttcttggtgttggcattggattcggaaatcaagcagttccgttgtacctctcagaaatggctcctgcaaaaattcgaggtgcaattaaccaacttttccagctgaccacctgcttggggattttgatagccaacttgatcaattactttactgagaagattcatccatggggttggagactgtcgcttggtttagctgcagtgccggcaactcttatgtttgttgggggtctctttcttcctgagaccccaaacagtcttgtagaacaaggcagattagaagaaggaagaaggatactggagaaagtgagaggtacaacaaaagttgatgcagagtttgctgacctggttgatgccagcaatgcagctcgagccattaagcacccgttcaggaatctacttacacgaaaaaatcgtccccagttggtgattggggcattgggaatcccggcattccaacagctcactggcatgaactctatcctcttctatgcccccgtcatatttcagagcttgggttttggctcaggggcatctctctactcatctatctttaccagcggagcgcttgttattgcagcacttatttcaatgcgttgggtcgataagtttggcagaagagctttcttcttagaagctggcaccgaaatgatatgctgcttggttgctttggcaattactctagcactgaagtttggacaaggagaagtccttccaaaaggaattggaatcttccttgtgattcttctttgcgtatttgttttggcttatggaaggtcttggggtcctctgggatggctagttccaagtgagctattccccttggaaacaagatcagcaggacagagtattgtggtgtgtgtcaacctcctcttcacag

Protein Analysis

437

Amino Acids

47.72

Weight (kDa)

9.35

Isoelectric Point (pI)

33.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011228)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 551
Acc36I ACCTGC 1 cut(s) 551
AccB1I GGYRCC 1 cut(s) 1073
AccBSI CCGCTC 1 cut(s) 380
AciI CCGC 2 cut(s) 380, 993
AclWI GGATC 2 cut(s) 244, 364
AcsI RAATTY 2 cut(s) 176, 504
AcuI CTGAAG 1 cut(s) 1142
AfaI GTAC 4 cut(s) 33, 278, 479, 748
AfeI AGCGCT 1 cut(s) 999
AfiI CCNNNNNNNGG 2 cut(s) 328, 549
AgsI TTSAA 3 cut(s) 172, 297, 1023
AjnI CCWGG 1 cut(s) 777
AloI GAACNNNNNNTCC 2 cut(s) 1218, 1250
Alw26I GTCTC 4 cut(s) 215, 604, 668, 671
AlwI GGATC 2 cut(s) 244, 364
AlwNI CAGNNNCTG 1 cut(s) 253
Ama87I CYCGRG 1 cut(s) 801
Aor51HI AGCGCT 1 cut(s) 999
AoxI GGCC 1 cut(s) 286
ApeKI GCWGC 5 cut(s) 98, 629, 797, 1010, 1089
ApoI RAATTY 2 cut(s) 176, 504
ArsI GACNNNNNNTTYG 2 cut(s) 832, 864
AseI ATTAAT 1 cut(s) 410
Asp700I GAANNNNTTC 2 cut(s) 176, 1143
AspLEI GCGC 1 cut(s) 1000
AspS9I GGNCC 2 cut(s) 382, 1217
AsuC2I CCSGG 1 cut(s) 881
AsuHPI GGTGA 1 cut(s) 871
AvaI CYCGRG 1 cut(s) 801
AvaII GGWCC 2 cut(s) 382, 1217
BanI GGYRCC 1 cut(s) 1073
BanII GRGCYC 1 cut(s) 46
BbvI GCAGC 5 cut(s) 110, 616, 809, 1022, 1076
BccI CCATC 1 cut(s) 1221
BcgI CGANNNNNNTGC 2 cut(s) 436, 470
BciT130I CCWGG 1 cut(s) 779
BciVI GTATCC 1 cut(s) 720
BclI TGATCA 1 cut(s) 570
BcnI CCSGG 1 cut(s) 881
BcoDI GTCTC 4 cut(s) 215, 604, 668, 671
BfaI CTAG 2 cut(s) 1115, 1232
BfmI CTRYAG 1 cut(s) 630
BfoI RGCGCY 1 cut(s) 1001
BfuAI ACCTGC 1 cut(s) 551
BfuI GTATCC 1 cut(s) 720
BisI GCNGC 5 cut(s) 99, 630, 798, 1011, 1090
BlsI GCNGC 5 cut(s) 100, 631, 799, 1012, 1091
Bme1390I CCNGG 2 cut(s) 779, 881
Bme18I GGWCC 2 cut(s) 382, 1217
BmeT110I CYCGRG 1 cut(s) 801
BmgT120I GGNCC 2 cut(s) 382, 1217
BmiI GGNNCC 3 cut(s) 495, 1075, 1218
BmrFI CCNGG 2 cut(s) 779, 881
BmrI ACTGGG 1 cut(s) 847
BmsI GCATC 4 cut(s) 354, 751, 775, 974
BmuI ACTGGG 1 cut(s) 847
BplI GAGNNNNNCTC 4 cut(s) 99, 131, 369, 401
BpmI CTGGAG 1 cut(s) 752
Bpu10I CCTNAGC 1 cut(s) 958
BpuMI CCSGG 1 cut(s) 881
BsaI GGTCTC 2 cut(s) 668, 671
BsaJI CCNNGG 3 cut(s) 156, 599, 1254
BsaXI ACNNNNNCTCC 4 cut(s) 12, 42, 987, 1017
Bsc4I CCNNNNNNNGG 2 cut(s) 328, 549
Bse118I RCCGGY 1 cut(s) 637
Bse1I ACTGG 3 cut(s) 735, 853, 904
Bse3DI GCAATG 1 cut(s) 799
BseBI CCWGG 1 cut(s) 779
BseDI CCNNGG 3 cut(s) 156, 599, 1254
BseGI GGATG 4 cut(s) 166, 266, 595, 1232
BseLI CCNNNNNNNGG 2 cut(s) 328, 549
BseMI GCAATG 1 cut(s) 799
BseMII CTCAG 4 cut(s) 498, 576, 666, 972
BseNI ACTGG 3 cut(s) 735, 853, 904
BseRI GAGGAG 2 cut(s) 33, 1292
BseXI GCAGC 5 cut(s) 110, 616, 809, 1022, 1076
BshFI GGCC 1 cut(s) 288
BshNI GGYRCC 1 cut(s) 1073
BsiHKCI CYCGRG 1 cut(s) 801
BsiSI CCGG 2 cut(s) 638, 881
BslFI GGGAC 2 cut(s) 438, 834
BslI CCNNNNNNNGG 2 cut(s) 328, 549
BsmAI GTCTC 4 cut(s) 215, 604, 668, 671
BsmFI GGGAC 2 cut(s) 438, 834
BsmI GAATGC 1 cut(s) 884
BsnI GGCC 1 cut(s) 288
Bso31I GGTCTC 2 cut(s) 668, 671
BsoBI CYCGRG 1 cut(s) 801
Bsp1286I GDGCHC 1 cut(s) 46
Bsp1407I TGTACA 1 cut(s) 31
Bsp143I GATC 6 cut(s) 127, 249, 356, 417, 570, 1265
Bsp19I CCATGG 2 cut(s) 156, 599
BspACI CCGC 2 cut(s) 380, 993
BspANI GGCC 1 cut(s) 288
BspCNI CTCAG 4 cut(s) 497, 577, 667, 971
BspLI GGNNCC 3 cut(s) 495, 1075, 1218
BspMAI CTGCAG 1 cut(s) 634
BspMI ACCTGC 1 cut(s) 551
BspPI GGATC 2 cut(s) 244, 364
BspQI GCTCTTC 1 cut(s) 1045
BspT107I GGYRCC 1 cut(s) 1073
BspTNI GGTCTC 2 cut(s) 668, 671
BsrBI CCGCTC 1 cut(s) 380
BsrDI GCAATG 1 cut(s) 799
BsrFI RCCGGY 1 cut(s) 637
BsrGI TGTACA 1 cut(s) 31
BsrI ACTGG 3 cut(s) 735, 853, 904
BssAI RCCGGY 1 cut(s) 637
BssECI CCNNGG 3 cut(s) 156, 599, 1254
BssMI GATC 6 cut(s) 127, 249, 356, 417, 570, 1265
BssT1I CCWWGG 3 cut(s) 156, 599, 1254
Bst2UI CCWGG 1 cut(s) 779
Bst4CI ACNGT 3 cut(s) 233, 615, 689
Bst6I CTCTTC 3 cut(s) 266, 923, 1045
BstAPI GCANNNNNTGC 1 cut(s) 770
BstAUI TGTACA 1 cut(s) 31
BstC8I GCNNGC 5 cut(s) 286, 343, 639, 790, 1072
BstDEI CTNAG 6 cut(s) 373, 484, 585, 675, 958, 1063
BstDSI CCRYGG 2 cut(s) 156, 599
BstF5I GGATG 4 cut(s) 166, 266, 595, 1232
BstH2I RGCGCY 1 cut(s) 1001
BstHHI GCGC 1 cut(s) 1000
BstKTI GATC 6 cut(s) 130, 252, 359, 420, 573, 1268
BstMAI GTCTC 4 cut(s) 215, 604, 668, 671
BstMBI GATC 6 cut(s) 127, 249, 356, 417, 570, 1265
BstMWI GCNNNNNNNGC 4 cut(s) 638, 770, 794, 803
BstNI CCWGG 1 cut(s) 779
BstSCI CCNGG 2 cut(s) 777, 879
BstSFI CTRYAG 1 cut(s) 630
BstV1I GCAGC 5 cut(s) 110, 616, 809, 1022, 1076
BstX2I RGATCY 1 cut(s) 249
BstXI CCANNNNNNTGG 2 cut(s) 547, 606
BstYI RGATCY 1 cut(s) 249
BsuI GTATCC 1 cut(s) 720
BsuRI GGCC 1 cut(s) 288
BtgI CCRYGG 2 cut(s) 156, 599
BtsCI GGATG 4 cut(s) 166, 266, 595, 1232
BtsI GCAGTG 1 cut(s) 639
BtsIMutI CAGTG 3 cut(s) 639, 897, 1118
BveI ACCTGC 1 cut(s) 551
Cac8I GCNNGC 5 cut(s) 286, 343, 639, 790, 1072
CaiI CAGNNNCTG 1 cut(s) 253
CfoI GCGC 1 cut(s) 1000
Cfr10I RCCGGY 1 cut(s) 637
Cfr13I GGNCC 2 cut(s) 382, 1217
CsiI ACCWGGT 1 cut(s) 777
Csp6I GTAC 4 cut(s) 32, 277, 478, 747
CviAII CATG 4 cut(s) 35, 157, 600, 904
CviQI GTAC 4 cut(s) 32, 277, 478, 747
DdeI CTNAG 6 cut(s) 373, 484, 585, 675, 958, 1063
DpnI GATC 6 cut(s) 129, 251, 358, 419, 572, 1267
DpnII GATC 6 cut(s) 127, 249, 356, 417, 570, 1265
Eam1104I CTCTTC 3 cut(s) 266, 923, 1045
EarI CTCTTC 3 cut(s) 266, 923, 1045
Eco130I CCWWGG 3 cut(s) 156, 599, 1254
Eco24I GRGCYC 1 cut(s) 46
Eco31I GGTCTC 2 cut(s) 668, 671
Eco47I GGWCC 2 cut(s) 382, 1217
Eco47III AGCGCT 1 cut(s) 999
Eco57I CTGAAG 1 cut(s) 1142
Eco88I CYCGRG 1 cut(s) 801
EcoO109I RGGNCCY 1 cut(s) 1217
EcoRI GAATTC 1 cut(s) 176
EcoRII CCWGG 1 cut(s) 777
EcoT14I CCWWGG 3 cut(s) 156, 599, 1254
EcoT38I GRGCYC 1 cut(s) 46
ErhI CCWWGG 3 cut(s) 156, 599, 1254
FaeI CATG 4 cut(s) 38, 160, 603, 907
FalI AAGNNNNNCTT 2 cut(s) 164, 196
FaqI GGGAC 2 cut(s) 438, 834
FatI CATG 4 cut(s) 34, 156, 599, 903
FbaI TGATCA 1 cut(s) 570
Fnu4HI GCNGC 5 cut(s) 99, 630, 798, 1011, 1090
FokI GGATG 4 cut(s) 173, 253, 582, 1239
FriOI GRGCYC 1 cut(s) 46
Fsp4HI GCNGC 5 cut(s) 99, 630, 798, 1011, 1090
FspBI CTAG 2 cut(s) 1115, 1232
GlaI GCGC 1 cut(s) 999
GluI GCNGC 5 cut(s) 99, 630, 798, 1011, 1090
GsuI CTGGAG 1 cut(s) 752
HaeII RGCGCY 1 cut(s) 1001
HaeIII GGCC 1 cut(s) 288
HapII CCGG 2 cut(s) 638, 881
HhaI GCGC 1 cut(s) 1000
Hin1II CATG 4 cut(s) 38, 160, 603, 907
Hin6I GCGC 1 cut(s) 998
HinP1I GCGC 1 cut(s) 998
HincII GTYRAC 1 cut(s) 1297
HindII GTYRAC 1 cut(s) 1297
HinfI GANTC 6 cut(s) 453, 592, 826, 876, 1161, 1174
HpaII CCGG 2 cut(s) 638, 881
HphI GGTGA 1 cut(s) 871
Hpy166II GTNNAC 1 cut(s) 1297
Hpy188I TCNGA 3 cut(s) 458, 487, 942
Hpy188III TCNNGA 4 cut(s) 169, 253, 674, 823
Hpy8I GTNNAC 1 cut(s) 1297
HpyAV CCTTC 6 cut(s) 166, 192, 710, 717, 1154, 1200
HpyCH4III ACNGT 3 cut(s) 233, 615, 689
HpyCH4V TGCA 8 cut(s) 90, 98, 500, 515, 632, 764, 797, 1010
HpyF10VI GCNNNNNNNGC 4 cut(s) 638, 770, 794, 803
HpyF3I CTNAG 6 cut(s) 373, 484, 585, 675, 958, 1063
Hsp92II CATG 4 cut(s) 38, 160, 603, 907
HspAI GCGC 1 cut(s) 998
KroI GCCGGC 1 cut(s) 637
KroNI GCCGGC 1 cut(s) 639
Ksp22I TGATCA 1 cut(s) 570
Kzo9I GATC 6 cut(s) 127, 249, 356, 417, 570, 1265
LguI GCTCTTC 1 cut(s) 1045
LmnI GCTCC 5 cut(s) 20, 305, 377, 499, 995
Lsp1109I GCAGC 5 cut(s) 110, 616, 809, 1022, 1076
LweI GCATC 4 cut(s) 354, 751, 775, 974
MabI ACCWGGT 1 cut(s) 777
MaeI CTAG 2 cut(s) 1115, 1232
MaeIII GTNAC 2 cut(s) 148, 316
MalI GATC 6 cut(s) 129, 251, 358, 419, 572, 1267
MbiI CCGCTC 1 cut(s) 380
MboI GATC 6 cut(s) 127, 249, 356, 417, 570, 1265
MflI RGATCY 1 cut(s) 249
MhlI GDGCHC 1 cut(s) 46
MluCI AATT 8 cut(s) 63, 176, 206, 504, 516, 574, 1107, 1155
MmeI TCCRAC 3 cut(s) 334, 587, 913
MroNI GCCGGC 1 cut(s) 637
MroXI GAANNNNTTC 2 cut(s) 176, 1143
MseI TTAA 3 cut(s) 410, 519, 810
MslI CAYNNNNRTG 4 cut(s) 216, 410, 902, 1079
MspA1I CMGCKG 2 cut(s) 535, 993
MspI CCGG 2 cut(s) 638, 881
MspR9I CCNGG 2 cut(s) 779, 881
Mva1269I GAATGC 1 cut(s) 884
MvaI CCWGG 1 cut(s) 779
MwoI GCNNNNNNNGC 4 cut(s) 638, 770, 794, 803
NaeI GCCGGC 1 cut(s) 639
NciI CCSGG 1 cut(s) 881
NcoI CCATGG 2 cut(s) 156, 599
NdeII GATC 6 cut(s) 127, 249, 356, 417, 570, 1265
NgoMIV GCCGGC 1 cut(s) 637
NlaIII CATG 4 cut(s) 38, 160, 603, 907
NlaIV GGNNCC 3 cut(s) 495, 1075, 1218
NmuCI GTSAC 1 cut(s) 148
PaeR7I CTCGAG 1 cut(s) 801
PaqCI CACCTGC 1 cut(s) 551
PciSI GCTCTTC 1 cut(s) 1045
PcsI WCGNNNNNNNCGW 1 cut(s) 844
PctI GAATGC 1 cut(s) 884
PdiI GCCGGC 1 cut(s) 639
PdmI GAANNNNTTC 2 cut(s) 176, 1143
PfeI GAWTC 6 cut(s) 453, 592, 826, 876, 1161, 1174
PkrI GCNGC 5 cut(s) 100, 631, 799, 1012, 1091
PpuMI RGGWCCY 1 cut(s) 1217
PshBI ATTAAT 1 cut(s) 410
Psp5II RGGWCCY 1 cut(s) 1217
Psp6I CCWGG 1 cut(s) 777
PspGI CCWGG 1 cut(s) 777
PspN4I GGNNCC 3 cut(s) 495, 1075, 1218
PspPI GGNCC 2 cut(s) 382, 1217
PspPPI RGGWCCY 1 cut(s) 1217
PspXI VCTCGAGB 1 cut(s) 801
PstI CTGCAG 1 cut(s) 634
PstNI CAGNNNCTG 1 cut(s) 253
PsuI RGATCY 1 cut(s) 249
PvuII CAGCTG 1 cut(s) 535
RsaI GTAC 4 cut(s) 33, 278, 479, 748
RsaNI GTAC 4 cut(s) 32, 277, 478, 747
RseI CAYNNNNRTG 4 cut(s) 216, 410, 902, 1079
SapI GCTCTTC 1 cut(s) 1045
SaqAI TTAA 3 cut(s) 410, 519, 810
SatI GCNGC 5 cut(s) 99, 630, 798, 1011, 1090
Sau3AI GATC 6 cut(s) 127, 249, 356, 417, 570, 1265
Sau96I GGNCC 2 cut(s) 382, 1217
ScrFI CCNGG 2 cut(s) 779, 881
SduI GDGCHC 1 cut(s) 46
SexAI ACCWGGT 1 cut(s) 777
SfaNI GCATC 4 cut(s) 354, 751, 775, 974
SfcI CTRYAG 1 cut(s) 630
Sfr274I CTCGAG 1 cut(s) 801
SinI GGWCC 2 cut(s) 382, 1217
SlaI CTCGAG 1 cut(s) 801
SmiMI CAYNNNNRTG 4 cut(s) 216, 410, 902, 1079
SmlI CTYRAG 1 cut(s) 801
SmoI CTYRAG 1 cut(s) 801
Sse9I AATT 8 cut(s) 63, 176, 206, 504, 516, 574, 1107, 1155
SsiI CCGC 2 cut(s) 380, 993
SspI AATATT 1 cut(s) 432
SspMI CTAG 2 cut(s) 1115, 1232
StyD4I CCNGG 2 cut(s) 777, 879
StyI CCWWGG 3 cut(s) 156, 599, 1254
TaaI ACNGT 3 cut(s) 233, 615, 689
TaqI TCGA 3 cut(s) 508, 802, 1035
TasI AATT 8 cut(s) 63, 176, 206, 504, 516, 574, 1107, 1155
TatI WGTACW 2 cut(s) 31, 276
TfiI GAWTC 6 cut(s) 453, 592, 826, 876, 1161, 1174
Tru1I TTAA 3 cut(s) 410, 519, 810
Tru9I TTAA 3 cut(s) 410, 519, 810
TscAI CASTG 3 cut(s) 639, 904, 1125
TseFI GTSAC 1 cut(s) 148
TseI GCWGC 5 cut(s) 98, 629, 797, 1010, 1089
Tsp45I GTSAC 1 cut(s) 148
TspDTI ATGAA 3 cut(s) 67, 584, 920
TspGWI ACGGA 1 cut(s) 462
TspRI CASTG 3 cut(s) 639, 904, 1125
VpaK11BI GGWCC 2 cut(s) 382, 1217
VspI ATTAAT 1 cut(s) 410
XapI RAATTY 2 cut(s) 176, 504
XcmI CCANNNNNNNNNTGG 2 cut(s) 860, 896
XhoI CTCGAG 1 cut(s) 801
XmnI GAANNNNTTC 2 cut(s) 176, 1143
XspI CTAG 2 cut(s) 1115, 1232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.