Ubiquitin fusion degradation protein 1 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1066100.v1.1 MD15G1196800.v1.1 |
| pyrus_communis | pycom15g17580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 756 |
| AatII | GACGTC | 2 cut(s) | 675, 693 |
| AccI | GTMKAC | 1 cut(s) | 1268 |
| AccIII | TCCGGA | 1 cut(s) | 239 |
| AciI | CCGC | 3 cut(s) | 410, 510, 1194 |
| AclI | AACGTT | 1 cut(s) | 545 |
| AclWI | GGATC | 1 cut(s) | 293 |
| AcsI | RAATTY | 6 cut(s) | 211, 439, 521, 662, 956, 1041 |
| AcuI | CTGAAG | 7 cut(s) | 4, 30, 105, 150, 174, 201, 324 |
| AcyI | GRCGYC | 2 cut(s) | 672, 690 |
| AfaI | GTAC | 1 cut(s) | 770 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 625, 971 |
| AgeI | ACCGGT | 2 cut(s) | 971, 1024 |
| AgsI | TTSAA | 5 cut(s) | 197, 263, 470, 788, 1155 |
| AjnI | CCWGG | 1 cut(s) | 289 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 677, 709 |
| AluBI | AGCT | 3 cut(s) | 340, 714, 1132 |
| AluI | AGCT | 3 cut(s) | 340, 714, 1132 |
| Alw26I | GTCTC | 4 cut(s) | 679, 692, 901, 1224 |
| AlwI | GGATC | 1 cut(s) | 293 |
| Ama87I | CYCGRG | 1 cut(s) | 1046 |
| Aor13HI | TCCGGA | 1 cut(s) | 239 |
| AoxI | GGCC | 3 cut(s) | 538, 918, 1227 |
| ApeKI | GCWGC | 5 cut(s) | 53, 294, 337, 646, 1206 |
| ApoI | RAATTY | 6 cut(s) | 211, 439, 521, 662, 956, 1041 |
| AsiGI | ACCGGT | 2 cut(s) | 971, 1024 |
| AspS9I | GGNCC | 3 cut(s) | 538, 748, 1009 |
| AsuC2I | CCSGG | 1 cut(s) | 483 |
| AsuHPI | GGTGA | 4 cut(s) | 107, 602, 616, 746 |
| AvaI | CYCGRG | 1 cut(s) | 1046 |
| AvaII | GGWCC | 2 cut(s) | 748, 1009 |
| BanII | GRGCYC | 1 cut(s) | 1088 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 133, 165, 199, 231, 617, 649 |
| BauI | CACGAG | 1 cut(s) | 1133 |
| BbsI | GAAGAC | 1 cut(s) | 138 |
| BbvI | GCAGC | 5 cut(s) | 40, 306, 349, 658, 1218 |
| BccI | CCATC | 2 cut(s) | 895, 986 |
| BceAI | ACGGC | 1 cut(s) | 781 |
| BciT130I | CCWGG | 1 cut(s) | 291 |
| BcnI | CCSGG | 1 cut(s) | 483 |
| BcoDI | GTCTC | 4 cut(s) | 679, 692, 901, 1224 |
| BfaI | CTAG | 2 cut(s) | 312, 324 |
| BfmI | CTRYAG | 3 cut(s) | 54, 61, 112 |
| BisI | GCNGC | 7 cut(s) | 54, 295, 338, 410, 647, 1194, 1207 |
| BlsI | GCNGC | 7 cut(s) | 55, 296, 339, 411, 648, 1195, 1208 |
| BmcAI | AGTACT | 1 cut(s) | 770 |
| Bme1390I | CCNGG | 2 cut(s) | 291, 483 |
| Bme18I | GGWCC | 2 cut(s) | 748, 1009 |
| BmeT110I | CYCGRG | 1 cut(s) | 1046 |
| BmgT120I | GGNCC | 3 cut(s) | 538, 748, 1009 |
| BmiI | GGNNCC | 3 cut(s) | 750, 867, 1078 |
| BmrFI | CCNGG | 2 cut(s) | 291, 483 |
| BmsI | GCATC | 1 cut(s) | 40 |
| BpiI | GAAGAC | 1 cut(s) | 138 |
| BpuMI | CCSGG | 1 cut(s) | 483 |
| BsaHI | GRCGYC | 2 cut(s) | 672, 690 |
| BsaI | GGTCTC | 1 cut(s) | 901 |
| BsaJI | CCNNGG | 2 cut(s) | 247, 1080 |
| BsaWI | WCCGGW | 3 cut(s) | 239, 971, 1024 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 625, 971 |
| Bse118I | RCCGGY | 3 cut(s) | 971, 1000, 1024 |
| Bse1I | ACTGG | 2 cut(s) | 563, 736 |
| BseAI | TCCGGA | 1 cut(s) | 239 |
| BseBI | CCWGG | 1 cut(s) | 291 |
| BseDI | CCNNGG | 2 cut(s) | 247, 1080 |
| BseGI | GGATG | 5 cut(s) | 278, 567, 934, 960, 997 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 625, 971 |
| BseMII | CTCAG | 5 cut(s) | 464, 690, 698, 908, 933 |
| BseNI | ACTGG | 2 cut(s) | 563, 736 |
| BseRI | GAGGAG | 2 cut(s) | 724, 779 |
| BseXI | GCAGC | 5 cut(s) | 40, 306, 349, 658, 1218 |
| BsgI | GTGCAG | 1 cut(s) | 687 |
| Bsh1285I | CGRYCG | 1 cut(s) | 427 |
| BshFI | GGCC | 3 cut(s) | 540, 920, 1229 |
| BshTI | ACCGGT | 2 cut(s) | 971, 1024 |
| BsiEI | CGRYCG | 1 cut(s) | 427 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1046 |
| BsiSI | CCGG | 5 cut(s) | 240, 483, 972, 1001, 1025 |
| BslFI | GGGAC | 3 cut(s) | 734, 784, 1152 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 625, 971 |
| BsmAI | GTCTC | 4 cut(s) | 679, 692, 901, 1224 |
| BsmBI | CGTCTC | 1 cut(s) | 679 |
| BsmFI | GGGAC | 3 cut(s) | 734, 784, 1152 |
| BsmI | GAATGC | 1 cut(s) | 1250 |
| BsnI | GGCC | 3 cut(s) | 540, 920, 1229 |
| Bso31I | GGTCTC | 1 cut(s) | 901 |
| BsoBI | CYCGRG | 1 cut(s) | 1046 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1088 |
| Bsp13I | TCCGGA | 1 cut(s) | 239 |
| Bsp143I | GATC | 6 cut(s) | 157, 223, 298, 424, 592, 1118 |
| BspACI | CCGC | 3 cut(s) | 410, 510, 1194 |
| BspANI | GGCC | 3 cut(s) | 540, 920, 1229 |
| BspCNI | CTCAG | 5 cut(s) | 465, 689, 699, 907, 934 |
| BspEI | TCCGGA | 1 cut(s) | 239 |
| BspLI | GGNNCC | 3 cut(s) | 750, 867, 1078 |
| BspMAI | CTGCAG | 1 cut(s) | 58 |
| BspPI | GGATC | 1 cut(s) | 293 |
| BspQI | GCTCTTC | 2 cut(s) | 279, 1196 |
| BspTNI | GGTCTC | 1 cut(s) | 901 |
| BsrFI | RCCGGY | 3 cut(s) | 971, 1000, 1024 |
| BsrI | ACTGG | 2 cut(s) | 563, 736 |
| BssAI | RCCGGY | 3 cut(s) | 971, 1000, 1024 |
| BssECI | CCNNGG | 2 cut(s) | 247, 1080 |
| BssMI | GATC | 6 cut(s) | 157, 223, 298, 424, 592, 1118 |
| BssNAI | GTATAC | 1 cut(s) | 1269 |
| BssNI | GRCGYC | 2 cut(s) | 672, 690 |
| BssSI | CACGAG | 1 cut(s) | 1133 |
| BssT1I | CCWWGG | 1 cut(s) | 1080 |
| Bst1107I | GTATAC | 1 cut(s) | 1269 |
| Bst2BI | CACGAG | 1 cut(s) | 1133 |
| Bst2UI | CCWGG | 1 cut(s) | 291 |
| Bst4CI | ACNGT | 4 cut(s) | 347, 590, 939, 1166 |
| Bst6I | CTCTTC | 2 cut(s) | 279, 1196 |
| BstACI | GRCGYC | 2 cut(s) | 672, 690 |
| BstC8I | GCNNGC | 2 cut(s) | 879, 1248 |
| BstDEI | CTNAG | 7 cut(s) | 203, 473, 676, 707, 894, 900, 942 |
| BstDSI | CCRYGG | 1 cut(s) | 247 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 623 |
| BstF5I | GGATG | 5 cut(s) | 278, 567, 934, 960, 997 |
| BstKTI | GATC | 6 cut(s) | 160, 226, 301, 427, 595, 1121 |
| BstMAI | GTCTC | 4 cut(s) | 679, 692, 901, 1224 |
| BstMBI | GATC | 6 cut(s) | 157, 223, 298, 424, 592, 1118 |
| BstMCI | CGRYCG | 1 cut(s) | 427 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 21, 286, 874, 883, 1243 |
| BstNI | CCWGG | 1 cut(s) | 291 |
| BstSCI | CCNGG | 2 cut(s) | 289, 481 |
| BstSFI | CTRYAG | 3 cut(s) | 54, 61, 112 |
| BstV1I | GCAGC | 5 cut(s) | 40, 306, 349, 658, 1218 |
| BstV2I | GAAGAC | 1 cut(s) | 138 |
| BstZ17I | GTATAC | 1 cut(s) | 1269 |
| BsuRI | GGCC | 3 cut(s) | 540, 920, 1229 |
| BtgI | CCRYGG | 1 cut(s) | 247 |
| BtsCI | GGATG | 5 cut(s) | 278, 567, 934, 960, 997 |
| BtsI | GCAGTG | 3 cut(s) | 505, 888, 1271 |
| BtsIMutI | CAGTG | 7 cut(s) | 172, 238, 505, 704, 729, 888, 1271 |
| Cac8I | GCNNGC | 2 cut(s) | 879, 1248 |
| Cfr10I | RCCGGY | 3 cut(s) | 971, 1000, 1024 |
| Cfr13I | GGNCC | 3 cut(s) | 538, 748, 1009 |
| CseI | GACGC | 1 cut(s) | 1095 |
| Csp6I | GTAC | 1 cut(s) | 769 |
| CspAI | ACCGGT | 2 cut(s) | 971, 1024 |
| CviAII | CATG | 5 cut(s) | 161, 227, 460, 637, 745 |
| CviQI | GTAC | 1 cut(s) | 769 |
| DdeI | CTNAG | 7 cut(s) | 203, 473, 676, 707, 894, 900, 942 |
| DpnI | GATC | 6 cut(s) | 159, 225, 300, 426, 594, 1120 |
| DpnII | GATC | 6 cut(s) | 157, 223, 298, 424, 592, 1118 |
| Eam1104I | CTCTTC | 2 cut(s) | 279, 1196 |
| EarI | CTCTTC | 2 cut(s) | 279, 1196 |
| Eco130I | CCWWGG | 1 cut(s) | 1080 |
| Eco24I | GRGCYC | 1 cut(s) | 1088 |
| Eco31I | GGTCTC | 1 cut(s) | 901 |
| Eco47I | GGWCC | 2 cut(s) | 748, 1009 |
| Eco57I | CTGAAG | 7 cut(s) | 4, 30, 105, 150, 174, 201, 324 |
| Eco88I | CYCGRG | 1 cut(s) | 1046 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 623 |
| EcoO109I | RGGNCCY | 1 cut(s) | 538 |
| EcoRI | GAATTC | 1 cut(s) | 211 |
| EcoRII | CCWGG | 1 cut(s) | 289 |
| EcoT14I | CCWWGG | 1 cut(s) | 1080 |
| EcoT38I | GRGCYC | 1 cut(s) | 1088 |
| ErhI | CCWWGG | 1 cut(s) | 1080 |
| Esp3I | CGTCTC | 1 cut(s) | 679 |
| FaeI | CATG | 5 cut(s) | 164, 230, 463, 640, 748 |
| FaqI | GGGAC | 3 cut(s) | 734, 784, 1152 |
| FatI | CATG | 5 cut(s) | 160, 226, 459, 636, 744 |
| FauI | CCCGC | 1 cut(s) | 503 |
| FblI | GTMKAC | 1 cut(s) | 1268 |
| Fnu4HI | GCNGC | 7 cut(s) | 54, 295, 338, 410, 647, 1194, 1207 |
| FokI | GGATG | 5 cut(s) | 285, 574, 941, 947, 1004 |
| FriOI | GRGCYC | 1 cut(s) | 1088 |
| Fsp4HI | GCNGC | 7 cut(s) | 54, 295, 338, 410, 647, 1194, 1207 |
| FspBI | CTAG | 2 cut(s) | 312, 324 |
| GluI | GCNGC | 7 cut(s) | 54, 295, 338, 410, 647, 1194, 1207 |
| HaeIII | GGCC | 3 cut(s) | 540, 920, 1229 |
| HapII | CCGG | 5 cut(s) | 240, 483, 972, 1001, 1025 |
| HgaI | GACGC | 1 cut(s) | 1095 |
| Hin1I | GRCGYC | 2 cut(s) | 672, 690 |
| Hin1II | CATG | 5 cut(s) | 164, 230, 463, 640, 748 |
| HincII | GTYRAC | 1 cut(s) | 1110 |
| HindII | GTYRAC | 1 cut(s) | 1110 |
| HinfI | GANTC | 7 cut(s) | 26, 71, 80, 98, 170, 236, 243 |
| HpaII | CCGG | 5 cut(s) | 240, 483, 972, 1001, 1025 |
| HphI | GGTGA | 4 cut(s) | 107, 602, 616, 746 |
| Hpy166II | GTNNAC | 2 cut(s) | 1110, 1269 |
| Hpy188III | TCNNGA | 6 cut(s) | 240, 302, 383, 492, 668, 1046 |
| Hpy8I | GTNNAC | 2 cut(s) | 1110, 1269 |
| Hpy99I | CGWCG | 1 cut(s) | 782 |
| HpyAV | CCTTC | 4 cut(s) | 5, 112, 619, 751 |
| HpyCH4III | ACNGT | 4 cut(s) | 347, 590, 939, 1166 |
| HpyCH4IV | ACGT | 4 cut(s) | 545, 672, 690, 780 |
| HpyCH4V | TGCA | 9 cut(s) | 56, 583, 646, 704, 806, 813, 1022, 1246, 1276 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 21, 286, 874, 883, 1243 |
| HpyF3I | CTNAG | 7 cut(s) | 203, 473, 676, 707, 894, 900, 942 |
| HpySE526I | ACGT | 4 cut(s) | 545, 672, 690, 780 |
| Hsp92I | GRCGYC | 2 cut(s) | 672, 690 |
| Hsp92II | CATG | 5 cut(s) | 164, 230, 463, 640, 748 |
| Kpn2I | TCCGGA | 1 cut(s) | 239 |
| Kzo9I | GATC | 6 cut(s) | 157, 223, 298, 424, 592, 1118 |
| LguI | GCTCTTC | 2 cut(s) | 279, 1196 |
| LmnI | GCTCC | 2 cut(s) | 711, 865 |
| Lsp1109I | GCAGC | 5 cut(s) | 40, 306, 349, 658, 1218 |
| LweI | GCATC | 1 cut(s) | 40 |
| MaeI | CTAG | 2 cut(s) | 312, 324 |
| MaeII | ACGT | 4 cut(s) | 545, 672, 690, 780 |
| MaeIII | GTNAC | 1 cut(s) | 350 |
| MalI | GATC | 6 cut(s) | 159, 225, 300, 426, 594, 1120 |
| MboI | GATC | 6 cut(s) | 157, 223, 298, 424, 592, 1118 |
| MhlI | GDGCHC | 1 cut(s) | 1088 |
| MmeI | TCCRAC | 2 cut(s) | 198, 498 |
| MroI | TCCGGA | 1 cut(s) | 239 |
| MslI | CAYNNNNRTG | 2 cut(s) | 165, 231 |
| MspA1I | CMGCKG | 1 cut(s) | 412 |
| MspI | CCGG | 5 cut(s) | 240, 483, 972, 1001, 1025 |
| MspR9I | CCNGG | 2 cut(s) | 291, 483 |
| Mva1269I | GAATGC | 1 cut(s) | 1250 |
| MvaI | CCWGG | 1 cut(s) | 291 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 21, 286, 874, 883, 1243 |
| NciI | CCSGG | 1 cut(s) | 483 |
| NdeII | GATC | 6 cut(s) | 157, 223, 298, 424, 592, 1118 |
| NlaIII | CATG | 5 cut(s) | 164, 230, 463, 640, 748 |
| NlaIV | GGNNCC | 3 cut(s) | 750, 867, 1078 |
| PaeR7I | CTCGAG | 1 cut(s) | 1046 |
| PciSI | GCTCTTC | 2 cut(s) | 279, 1196 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 390 |
| PctI | GAATGC | 1 cut(s) | 1250 |
| PfeI | GAWTC | 7 cut(s) | 26, 71, 80, 98, 170, 236, 243 |
| PinAI | ACCGGT | 2 cut(s) | 971, 1024 |
| PkrI | GCNGC | 7 cut(s) | 55, 296, 339, 411, 648, 1195, 1208 |
| Ple19I | CGATCG | 1 cut(s) | 427 |
| PsiI | TTATAA | 1 cut(s) | 756 |
| Psp1406I | AACGTT | 1 cut(s) | 545 |
| Psp6I | CCWGG | 1 cut(s) | 289 |
| PspGI | CCWGG | 1 cut(s) | 289 |
| PspN4I | GGNNCC | 3 cut(s) | 750, 867, 1078 |
| PspPI | GGNCC | 3 cut(s) | 538, 748, 1009 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 310, 342, 1135, 1167 |
| PstI | CTGCAG | 1 cut(s) | 58 |
| PvuI | CGATCG | 1 cut(s) | 427 |
| RsaI | GTAC | 1 cut(s) | 770 |
| RsaNI | GTAC | 1 cut(s) | 769 |
| RseI | CAYNNNNRTG | 2 cut(s) | 165, 231 |
| SapI | GCTCTTC | 2 cut(s) | 279, 1196 |
| SatI | GCNGC | 7 cut(s) | 54, 295, 338, 410, 647, 1194, 1207 |
| Sau3AI | GATC | 6 cut(s) | 157, 223, 298, 424, 592, 1118 |
| Sau96I | GGNCC | 3 cut(s) | 538, 748, 1009 |
| ScaI | AGTACT | 1 cut(s) | 770 |
| ScrFI | CCNGG | 2 cut(s) | 291, 483 |
| SduI | GDGCHC | 1 cut(s) | 1088 |
| SfaNI | GCATC | 1 cut(s) | 40 |
| SfcI | CTRYAG | 3 cut(s) | 54, 61, 112 |
| Sfr274I | CTCGAG | 1 cut(s) | 1046 |
| SinI | GGWCC | 2 cut(s) | 748, 1009 |
| SlaI | CTCGAG | 1 cut(s) | 1046 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 165, 231 |
| SmlI | CTYRAG | 1 cut(s) | 1046 |
| SmoI | CTYRAG | 1 cut(s) | 1046 |
| SsiI | CCGC | 3 cut(s) | 410, 510, 1194 |
| SspMI | CTAG | 2 cut(s) | 312, 324 |
| StyD4I | CCNGG | 2 cut(s) | 289, 481 |
| StyI | CCWWGG | 1 cut(s) | 1080 |
| TaaI | ACNGT | 4 cut(s) | 347, 590, 939, 1166 |
| TaiI | ACGT | 4 cut(s) | 548, 675, 693, 783 |
| TaqI | TCGA | 6 cut(s) | 384, 423, 437, 777, 1047, 1117 |
| TaqII | GACCGA | 1 cut(s) | 925 |
| TatI | WGTACW | 1 cut(s) | 768 |
| TauI | GCSGC | 2 cut(s) | 412, 1196 |
| TfiI | GAWTC | 7 cut(s) | 26, 71, 80, 98, 170, 236, 243 |
| TscAI | CASTG | 7 cut(s) | 172, 238, 512, 711, 736, 888, 1278 |
| TseI | GCWGC | 5 cut(s) | 53, 294, 337, 646, 1206 |
| TspDTI | ATGAA | 8 cut(s) | 18, 63, 581, 653, 733, 945, 949, 1191 |
| TspGWI | ACGGA | 3 cut(s) | 236, 352, 1089 |
| TspRI | CASTG | 7 cut(s) | 172, 238, 512, 711, 736, 888, 1278 |
| VpaK11BI | GGWCC | 2 cut(s) | 748, 1009 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 623 |
| XapI | RAATTY | 6 cut(s) | 211, 439, 521, 662, 956, 1041 |
| XhoI | CTCGAG | 1 cut(s) | 1046 |
| XmiI | GTMKAC | 1 cut(s) | 1268 |
| XspI | CTAG | 2 cut(s) | 312, 324 |
| ZraI | GACGTC | 2 cut(s) | 673, 691 |
| ZrmI | AGTACT | 1 cut(s) | 770 |