MD02G1086500.v1.1

Protein Brevis radix-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0010246
Physical Location & Seq
Forward (+)
6778416 .. 6782838
4423 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1086500.v1.1.491

Sequence Viewer

Length: 1452 bp
ATGCCTCCCCTCTCCCACATGCCCGCCCCTAGCCCAATCGCCTGCATGGGCTGGAGCAAAGAAAGATGGCTATTGGGTTTTTTTGGTCCCCTATCCACCGAGCTGTACCCTCCGGTGGCATTTAAGTACTCTGTCTCGGTCGTGTCTCTGGTAGCTGACAGTTGCAGCGCTCGCTTCGTTCTCCACGCCTTCTTCTTCCACTCCAAATTCCATCCCTTTGGCGCCGGGAAACACGAAACGACCTCGTTTCGCAACCGCATTCCGTTTCAATTCTCCTCTCTCTGGGAGCTTCGCAGACGAAGTGTGAGCGCAGTCACAATGCTGACGTGCATAGCTCGCCCGAAGAAACTCGGCGACAACTCGCTGAGTCAGCCCGAGGTCTCCGACTCCACCAACACTCCGGCTTCCTCCAGTACCAAGCAGCAAGCCGCAATTAAATCGCTCACGTTTCAGCTCAAGGACATGGCATTAAAGGCTTCGGGAGCCTACAGGCACTGCGCCCCCTGCGCGGGGCCGGCGACGGCGGCTCAGAGTCGGTTCAAGGGGAGCGGCGAGTCGGACGCCGACTCGGACCGGTTCAGGTGGTCGTACCGGCGGACCGGGAGCTCGAGCTCGACGACGCCGAGGACTTGGGGGAAGGAGATGGAGGCGAGGCTGAAAGGGATCTCCAGCGGCGAGGGGACGCCGAACTCGGCCAGCGGGCGGCGAGTCGACCCGGTCGTGTTCGTGGAAGAGCGCGAGCCCAAGGAGTGGGTGGCTCAGGTGGAGGCCGGAGTTCTCATCACGTTCGTCTCCCTGCCACGTGGCGGGAACGATCTCAAGCGCATTCGGTTCAGTCGAGATATTTTCAACAAATGGCAAGCTCAGAGGTGGTGGGCTGACAACTATGACAGGGTCATGGAACTTTACAATGTTCAAAGGTTTAACCGGAATGCCTTCCCGCTTCCAACCCCACGAAGATCTGAAGATGAGAGTTCAAAGATGGAATCTGCAGAAGCCAGCCCTGTAACTCCCCCACTAACTAGAGAACGCCTACCTCGCAACTTGTATCGTCCCACAGGGATGGCTATGAGCTACTCATCCTCAGATTCGCTCGATCATCACCCGATGCAGTCCCGCCATTACAGCGATTCAGTTGGTGTCAATTCCACCCCAAAACTCTCCAGCATAAGTGGGACCAAGACAGAGACATCATCCATGGATGCTTCTATCAGAAGTAGTTCGTCAAGGGATGCAGATCGCTCAGGGGAGCTATCAATCAGCAATGCCAGCGATATGGAGACTGAATGGGTTGAACAGGATGAGCCAGGGGTTTACATCACAATCAGAGCATTACCAGGGGGCAAACGGGAGCTTAGACGGGTCAGATTCAGCCGAGAAAAATTTGGGGAGATGCATGCCAGATTGTGGTGGGAAGAGAATCGGGCAAGGATACACGAACAATACTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BRX BRX_N

Protein Analysis

484

Amino Acids

54.38

Weight (kDa)

9.58

Isoelectric Point (pI)

58.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRX_N PF13713 136 - 169 1.9e-12 Transcription factor BRX N-terminal domain
BRX PF08381 249 - 303 2.3e-24 Transcription factor regulating root and shoot growth via Pin3
BRX PF08381 427 - 482 1.8e-28 Transcription factor regulating root and shoot growth via Pin3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 221
AccB7I CCANNNNNTGG 2 cut(s) 750, 1407
AccBSI CCGCTC 1 cut(s) 549
AccI GTMKAC 1 cut(s) 711
AccII CGCG 2 cut(s) 509, 738
AclWI GGATC 1 cut(s) 671
AcoI YGGCCR 1 cut(s) 693
AcsI RAATTY 2 cut(s) 206, 1382
AcuI CTGAAG 1 cut(s) 984
AcvI CACGTG 1 cut(s) 803
AcyI GRCGYC 4 cut(s) 222, 561, 620, 683
AfaI GTAC 4 cut(s) 107, 128, 415, 590
AfeI AGCGCT 1 cut(s) 169
AfiI CCNNNNNNNGG 9 cut(s) 115, 282, 508, 509, 510, 702, 750, 806, 1407
AgeI ACCGGT 1 cut(s) 573
AgsI TTSAA 6 cut(s) 269, 541, 850, 917, 978, 1295
AjiI CACGTC 1 cut(s) 327
AjnI CCWGG 2 cut(s) 1306, 1336
Alw21I GWGCWC 2 cut(s) 608, 614
Alw26I GTCTC 6 cut(s) 139, 150, 385, 796, 1181, 1274
AlwI GGATC 1 cut(s) 671
AlwNI CAGNNNCTG 1 cut(s) 495
Ama87I CYCGRG 2 cut(s) 374, 607
Aor51HI AGCGCT 1 cut(s) 169
AoxI GGCC 3 cut(s) 512, 693, 768
ApeKI GCWGC 2 cut(s) 165, 421
ApoI RAATTY 2 cut(s) 206, 1382
AsiGI ACCGGT 1 cut(s) 573
Asp700I GAANNNNTTC 2 cut(s) 935, 1219
AspLEI GCGC 7 cut(s) 170, 224, 311, 500, 509, 738, 825
AspS9I GGNCC 5 cut(s) 86, 512, 571, 597, 1176
AsuC2I CCSGG 3 cut(s) 226, 601, 716
AsuHPI GGTGA 1 cut(s) 1094
AvaI CYCGRG 2 cut(s) 374, 607
AvaII GGWCC 4 cut(s) 86, 571, 597, 1176
BanI GGYRCC 1 cut(s) 221
BanII GRGCYC 3 cut(s) 608, 614, 744
BbrPI CACGTG 1 cut(s) 803
Bbv12I GWGCWC 2 cut(s) 608, 614
BbvI GCAGC 2 cut(s) 177, 433
BccI CCATC 5 cut(s) 60, 219, 637, 976, 1057
BceAI ACGGC 1 cut(s) 537
BcgI CGANNNNNNTGC 2 cut(s) 420, 454
BciT130I CCWGG 2 cut(s) 1308, 1338
BciVI GTATCC 1 cut(s) 1425
BcnI CCSGG 3 cut(s) 226, 601, 716
BcoDI GTCTC 6 cut(s) 139, 150, 385, 796, 1181, 1274
BfaI CTAG 2 cut(s) 30, 1023
BfmI CTRYAG 2 cut(s) 487, 990
BfoI RGCGCY 2 cut(s) 171, 225
BfuI GTATCC 1 cut(s) 1425
BglII AGATCT 1 cut(s) 959
BisI GCNGC 7 cut(s) 166, 422, 429, 525, 550, 673, 704
BlsI GCNGC 7 cut(s) 167, 423, 430, 526, 551, 674, 705
BmcAI AGTACT 1 cut(s) 128
Bme1390I CCNGG 5 cut(s) 226, 601, 716, 1308, 1338
Bme18I GGWCC 4 cut(s) 86, 571, 597, 1176
BmeT110I CYCGRG 2 cut(s) 374, 607
BmgBI CACGTC 1 cut(s) 327
BmgT120I GGNCC 5 cut(s) 86, 512, 571, 597, 1176
BmiI GGNNCC 5 cut(s) 88, 223, 484, 513, 1177
BmrFI CCNGG 5 cut(s) 226, 601, 716, 1308, 1338
BmsI GCATC 4 cut(s) 1098, 1192, 1222, 1383
BpmI CTGGAG 4 cut(s) 73, 394, 652, 1147
Bpu10I CCTNAGC 2 cut(s) 759, 1243
BpuEI CTTGAG 2 cut(s) 440, 803
BpuMI CCSGG 3 cut(s) 226, 601, 716
BsaAI YACGTR 1 cut(s) 803
BsaBI GATNNNNATC 1 cut(s) 1236
BsaHI GRCGYC 4 cut(s) 222, 561, 620, 683
BsaI GGTCTC 1 cut(s) 385
BsaJI CCNNGG 6 cut(s) 375, 623, 744, 1197, 1307, 1337
BsaWI WCCGGW 3 cut(s) 112, 573, 927
BsaXI ACNNNNNCTCC 2 cut(s) 382, 412
Bsc4I CCNNNNNNNGG 9 cut(s) 115, 282, 508, 509, 510, 702, 750, 806, 1407
Bse118I RCCGGY 3 cut(s) 514, 573, 591
Bse1I ACTGG 1 cut(s) 411
Bse3DI GCAATG 1 cut(s) 1270
Bse8I GATNNNNATC 1 cut(s) 1236
BseBI CCWGG 2 cut(s) 1308, 1338
BseDI CCNNGG 6 cut(s) 375, 623, 744, 1197, 1307, 1337
BseGI GGATG 7 cut(s) 211, 1068, 1079, 1193, 1207, 1237, 1306
BseJI GATNNNNATC 1 cut(s) 1236
BseLI CCNNNNNNNGG 9 cut(s) 115, 282, 508, 509, 510, 702, 750, 806, 1407
BseMI GCAATG 1 cut(s) 1270
BseMII CTCAG 6 cut(s) 356, 542, 773, 878, 1098, 1257
BseNI ACTGG 1 cut(s) 411
BseRI GAGGAG 1 cut(s) 265
BseXI GCAGC 2 cut(s) 177, 433
Bsh1236I CGCG 2 cut(s) 509, 738
Bsh1285I CGRYCG 2 cut(s) 141, 720
BshFI GGCC 3 cut(s) 514, 695, 770
BshNI GGYRCC 1 cut(s) 221
BshTI ACCGGT 1 cut(s) 573
BsiEI CGRYCG 2 cut(s) 141, 720
BsiHKAI GWGCWC 2 cut(s) 608, 614
BsiHKCI CYCGRG 2 cut(s) 374, 607
BslFI GGGAC 5 cut(s) 72, 694, 1038, 1099, 1189
BslI CCNNNNNNNGG 9 cut(s) 115, 282, 508, 509, 510, 702, 750, 806, 1407
BsmAI GTCTC 6 cut(s) 139, 150, 385, 796, 1181, 1274
BsmBI CGTCTC 1 cut(s) 796
BsmFI GGGAC 5 cut(s) 72, 694, 1038, 1099, 1189
BsmI GAATGC 3 cut(s) 258, 825, 937
BsnI GGCC 3 cut(s) 514, 695, 770
Bso31I GGTCTC 1 cut(s) 385
BsoBI CYCGRG 2 cut(s) 374, 607
Bsp1286I GDGCHC 3 cut(s) 608, 614, 744
Bsp143I GATC 5 cut(s) 663, 814, 959, 1096, 1237
Bsp19I CCATGG 1 cut(s) 1197
BspANI GGCC 3 cut(s) 514, 695, 770
BspCNI CTCAG 6 cut(s) 357, 541, 772, 877, 1097, 1256
BspFNI CGCG 2 cut(s) 509, 738
BspLI GGNNCC 5 cut(s) 88, 223, 484, 513, 1177
BspMAI CTGCAG 1 cut(s) 994
BspPI GGATC 1 cut(s) 671
BspQI GCTCTTC 1 cut(s) 726
BspT107I GGYRCC 1 cut(s) 221
BspTNI GGTCTC 1 cut(s) 385
BsrBI CCGCTC 1 cut(s) 549
BsrDI GCAATG 1 cut(s) 1270
BsrFI RCCGGY 3 cut(s) 514, 573, 591
BsrI ACTGG 1 cut(s) 411
BssAI RCCGGY 3 cut(s) 514, 573, 591
BssECI CCNNGG 6 cut(s) 375, 623, 744, 1197, 1307, 1337
BssMI GATC 5 cut(s) 663, 814, 959, 1096, 1237
BssNI GRCGYC 4 cut(s) 222, 561, 620, 683
BssT1I CCWWGG 2 cut(s) 744, 1197
Bst2UI CCWGG 2 cut(s) 1308, 1338
Bst4CI ACNGT 1 cut(s) 161
Bst6I CTCTTC 2 cut(s) 726, 1410
BstACI GRCGYC 4 cut(s) 222, 561, 620, 683
BstBAI YACGTR 1 cut(s) 803
BstDEI CTNAG 7 cut(s) 365, 528, 759, 864, 1084, 1243, 1355
BstDSI CCRYGG 1 cut(s) 1197
BstF5I GGATG 7 cut(s) 211, 1068, 1079, 1193, 1207, 1237, 1306
BstFNI CGCG 2 cut(s) 509, 738
BstH2I RGCGCY 2 cut(s) 171, 225
BstHHI GCGC 7 cut(s) 170, 224, 311, 500, 509, 738, 825
BstKTI GATC 5 cut(s) 666, 817, 962, 1099, 1240
BstMAI GTCTC 6 cut(s) 139, 150, 385, 796, 1181, 1274
BstMBI GATC 5 cut(s) 663, 814, 959, 1096, 1237
BstMCI CGRYCG 2 cut(s) 141, 720
BstNI CCWGG 2 cut(s) 1308, 1338
BstNSI RCATGY 2 cut(s) 22, 1400
BstSCI CCNGG 5 cut(s) 224, 599, 714, 1306, 1336
BstSFI CTRYAG 2 cut(s) 487, 990
BstUI CGCG 2 cut(s) 509, 738
BstV1I GCAGC 2 cut(s) 177, 433
BstX2I RGATCY 2 cut(s) 663, 959
BstXI CCANNNNNNTGG 3 cut(s) 218, 1063, 1276
BstYI RGATCY 2 cut(s) 663, 959
BsuI GTATCC 1 cut(s) 1425
BsuRI GGCC 3 cut(s) 514, 695, 770
BtgI CCRYGG 1 cut(s) 1197
BtrI CACGTC 1 cut(s) 327
BtsCI GGATG 7 cut(s) 211, 1068, 1079, 1193, 1207, 1237, 1306
BtsI GCAGTG 1 cut(s) 493
BtsIMutI CAGTG 1 cut(s) 493
CaiI CAGNNNCTG 1 cut(s) 495
CfoI GCGC 7 cut(s) 170, 224, 311, 500, 509, 738, 825
Cfr10I RCCGGY 3 cut(s) 514, 573, 591
Cfr13I GGNCC 5 cut(s) 86, 512, 571, 597, 1176
CpoI CGGWCCG 2 cut(s) 571, 597
CseI GACGC 3 cut(s) 569, 628, 691
Csp6I GTAC 4 cut(s) 106, 127, 414, 589
CspAI ACCGGT 1 cut(s) 573
CspI CGGWCCG 2 cut(s) 571, 597
CviAII CATG 6 cut(s) 19, 46, 463, 898, 1198, 1397
CviQI GTAC 4 cut(s) 106, 127, 414, 589
DdeI CTNAG 7 cut(s) 365, 528, 759, 864, 1084, 1243, 1355
DinI GGCGCC 1 cut(s) 223
DpnI GATC 5 cut(s) 665, 816, 961, 1098, 1239
DpnII GATC 5 cut(s) 663, 814, 959, 1096, 1237
EaeI YGGCCR 1 cut(s) 693
Eam1104I CTCTTC 2 cut(s) 726, 1410
EarI CTCTTC 2 cut(s) 726, 1410
EciI GGCGGA 1 cut(s) 610
Ecl136II GAGCTC 2 cut(s) 606, 612
Eco130I CCWWGG 2 cut(s) 744, 1197
Eco24I GRGCYC 3 cut(s) 608, 614, 744
Eco31I GGTCTC 1 cut(s) 385
Eco47I GGWCC 4 cut(s) 86, 571, 597, 1176
Eco47III AGCGCT 1 cut(s) 169
Eco53kI GAGCTC 2 cut(s) 606, 612
Eco57I CTGAAG 1 cut(s) 984
Eco72I CACGTG 1 cut(s) 803
Eco88I CYCGRG 2 cut(s) 374, 607
EcoICRI GAGCTC 2 cut(s) 606, 612
EcoRII CCWGG 2 cut(s) 1306, 1336
EcoT14I CCWWGG 2 cut(s) 744, 1197
EcoT22I ATGCAT 1 cut(s) 1398
EcoT38I GRGCYC 3 cut(s) 608, 614, 744
EgeI GGCGCC 1 cut(s) 223
EheI GGCGCC 1 cut(s) 223
ErhI CCWWGG 2 cut(s) 744, 1197
Esp3I CGTCTC 1 cut(s) 796
FaeI CATG 6 cut(s) 22, 49, 466, 901, 1201, 1400
FaqI GGGAC 5 cut(s) 72, 694, 1038, 1099, 1189
FatI CATG 6 cut(s) 18, 45, 462, 897, 1197, 1396
FauI CCCGC 6 cut(s) 31, 502, 692, 800, 948, 1124
FblI GTMKAC 1 cut(s) 711
Fnu4HI GCNGC 7 cut(s) 166, 422, 429, 525, 550, 673, 704
FokI GGATG 7 cut(s) 198, 1066, 1075, 1180, 1214, 1244, 1313
FriOI GRGCYC 3 cut(s) 608, 614, 744
Fsp4HI GCNGC 7 cut(s) 166, 422, 429, 525, 550, 673, 704
FspBI CTAG 2 cut(s) 30, 1023
GlaI GCGC 7 cut(s) 169, 223, 310, 499, 508, 737, 824
GluI GCNGC 7 cut(s) 166, 422, 429, 525, 550, 673, 704
GsuI CTGGAG 4 cut(s) 73, 394, 652, 1147
HaeII RGCGCY 2 cut(s) 171, 225
HaeIII GGCC 3 cut(s) 514, 695, 770
HgaI GACGC 3 cut(s) 569, 628, 691
HhaI GCGC 7 cut(s) 170, 224, 311, 500, 509, 738, 825
Hin1I GRCGYC 4 cut(s) 222, 561, 620, 683
Hin1II CATG 6 cut(s) 22, 49, 466, 901, 1201, 1400
Hin6I GCGC 7 cut(s) 168, 222, 309, 498, 507, 736, 823
HinP1I GCGC 7 cut(s) 168, 222, 309, 498, 507, 736, 823
HincII GTYRAC 1 cut(s) 712
HindII GTYRAC 1 cut(s) 712
HphI GGTGA 1 cut(s) 1094
Hpy166II GTNNAC 2 cut(s) 712, 1315
Hpy188III TCNNGA 2 cut(s) 480, 839
Hpy8I GTNNAC 2 cut(s) 712, 1315
Hpy99I CGWCG 3 cut(s) 523, 619, 622
HpyAV CCTTC 3 cut(s) 199, 631, 946
HpyCH4III ACNGT 1 cut(s) 161
HpyCH4IV ACGT 4 cut(s) 326, 446, 785, 802
HpyCH4V TGCA 7 cut(s) 45, 165, 330, 992, 1111, 1235, 1396
HpyF3I CTNAG 7 cut(s) 365, 528, 759, 864, 1084, 1243, 1355
HpySE526I ACGT 4 cut(s) 326, 446, 785, 802
Hsp92I GRCGYC 4 cut(s) 222, 561, 620, 683
Hsp92II CATG 6 cut(s) 22, 49, 466, 901, 1201, 1400
HspAI GCGC 7 cut(s) 168, 222, 309, 498, 507, 736, 823
KasI GGCGCC 1 cut(s) 221
KroI GCCGGC 1 cut(s) 514
KroNI GCCGGC 1 cut(s) 516
Kzo9I GATC 5 cut(s) 663, 814, 959, 1096, 1237
LguI GCTCTTC 1 cut(s) 726
LmnI GCTCC 7 cut(s) 54, 286, 482, 546, 603, 1249, 1351
Lsp1109I GCAGC 2 cut(s) 177, 433
LweI GCATC 4 cut(s) 1098, 1192, 1222, 1383
MaeI CTAG 2 cut(s) 30, 1023
MaeII ACGT 4 cut(s) 326, 446, 785, 802
MaeIII GTNAC 2 cut(s) 313, 1006
MalI GATC 5 cut(s) 665, 816, 961, 1098, 1239
MbiI CCGCTC 1 cut(s) 549
MboI GATC 5 cut(s) 663, 814, 959, 1096, 1237
MboII GAAGA 7 cut(s) 184, 187, 355, 743, 969, 977, 1427
MflI RGATCY 2 cut(s) 663, 959
MhlI GDGCHC 3 cut(s) 608, 614, 744
MluCI AATT 5 cut(s) 206, 269, 432, 1144, 1382
Mly113I GGCGCC 1 cut(s) 222
MlyI GAGTC 6 cut(s) 376, 380, 541, 560, 563, 717
MmeI TCCRAC 3 cut(s) 408, 537, 971
Mph1103I ATGCAT 1 cut(s) 1398
MroNI GCCGGC 1 cut(s) 514
MroXI GAANNNNTTC 2 cut(s) 935, 1219
MseI TTAA 4 cut(s) 123, 435, 470, 924
MslI CAYNNNNRTG 1 cut(s) 1061
MspA1I CMGCKG 2 cut(s) 672, 699
MspR9I CCNGG 5 cut(s) 226, 601, 716, 1308, 1338
Mva1269I GAATGC 3 cut(s) 258, 825, 937
MvaI CCWGG 2 cut(s) 1308, 1338
MvnI CGCG 2 cut(s) 509, 738
NaeI GCCGGC 1 cut(s) 516
NarI GGCGCC 1 cut(s) 222
NciI CCSGG 3 cut(s) 226, 601, 716
NcoI CCATGG 1 cut(s) 1197
NdeII GATC 5 cut(s) 663, 814, 959, 1096, 1237
NgoMIV GCCGGC 1 cut(s) 514
NlaIII CATG 6 cut(s) 22, 49, 466, 901, 1201, 1400
NlaIV GGNNCC 5 cut(s) 88, 223, 484, 513, 1177
NmeAIII GCCGAG 4 cut(s) 330, 648, 671, 1400
NmuCI GTSAC 1 cut(s) 313
NsiI ATGCAT 1 cut(s) 1398
NspI RCATGY 2 cut(s) 22, 1400
PaeI GCATGC 1 cut(s) 1400
PaeR7I CTCGAG 1 cut(s) 607
PciSI GCTCTTC 1 cut(s) 726
PcsI WCGNNNNNNNCGW 4 cut(s) 614, 620, 717, 835
PctI GAATGC 3 cut(s) 258, 825, 937
PdiI GCCGGC 1 cut(s) 516
PdmI GAANNNNTTC 2 cut(s) 935, 1219
PfeI GAWTC 5 cut(s) 986, 1088, 1130, 1368, 1420
PflFI GACNNNGTC 2 cut(s) 716, 893
PflMI CCANNNNNTGG 2 cut(s) 750, 1407
PinAI ACCGGT 1 cut(s) 573
PkrI GCNGC 7 cut(s) 167, 423, 430, 526, 551, 674, 705
PleI GAGTC 6 cut(s) 375, 380, 540, 560, 562, 716
PluTI GGCGCC 1 cut(s) 225
PmaCI CACGTG 1 cut(s) 803
PmlI CACGTG 1 cut(s) 803
PpsI GAGTC 6 cut(s) 375, 380, 540, 560, 562, 716
Ppu21I YACGTR 1 cut(s) 803
Psp124BI GAGCTC 2 cut(s) 608, 614
Psp6I CCWGG 2 cut(s) 1306, 1336
PspCI CACGTG 1 cut(s) 803
PspGI CCWGG 2 cut(s) 1306, 1336
PspN4I GGNNCC 5 cut(s) 88, 223, 484, 513, 1177
PspPI GGNCC 5 cut(s) 86, 512, 571, 597, 1176
PspXI VCTCGAGB 1 cut(s) 607
PstI CTGCAG 1 cut(s) 994
PstNI CAGNNNCTG 1 cut(s) 495
PsuI RGATCY 2 cut(s) 663, 959
PsyI GACNNNGTC 2 cut(s) 716, 893
RsaI GTAC 4 cut(s) 107, 128, 415, 590
RsaNI GTAC 4 cut(s) 106, 127, 414, 589
RseI CAYNNNNRTG 1 cut(s) 1061
Rsr2I CGGWCCG 2 cut(s) 571, 597
RsrII CGGWCCG 2 cut(s) 571, 597
SacI GAGCTC 2 cut(s) 608, 614
SalI GTCGAC 1 cut(s) 710
SapI GCTCTTC 1 cut(s) 726
SaqAI TTAA 4 cut(s) 123, 435, 470, 924
SatI GCNGC 7 cut(s) 166, 422, 429, 525, 550, 673, 704
Sau3AI GATC 5 cut(s) 663, 814, 959, 1096, 1237
Sau96I GGNCC 5 cut(s) 86, 512, 571, 597, 1176
ScaI AGTACT 1 cut(s) 128
SchI GAGTC 6 cut(s) 376, 380, 541, 560, 563, 717
ScrFI CCNGG 5 cut(s) 226, 601, 716, 1308, 1338
SduI GDGCHC 3 cut(s) 608, 614, 744
SfaNI GCATC 4 cut(s) 1098, 1192, 1222, 1383
SfcI CTRYAG 2 cut(s) 487, 990
SfoI GGCGCC 1 cut(s) 223
Sfr274I CTCGAG 1 cut(s) 607
SinI GGWCC 4 cut(s) 86, 571, 597, 1176
SlaI CTCGAG 1 cut(s) 607
SmiMI CAYNNNNRTG 1 cut(s) 1061
SmlI CTYRAG 3 cut(s) 455, 607, 818
SmoI CTYRAG 3 cut(s) 455, 607, 818
SphI GCATGC 1 cut(s) 1400
Sse9I AATT 5 cut(s) 206, 269, 432, 1144, 1382
SspDI GGCGCC 1 cut(s) 221
SspMI CTAG 2 cut(s) 30, 1023
SstI GAGCTC 2 cut(s) 608, 614
StyD4I CCNGG 5 cut(s) 224, 599, 714, 1306, 1336
StyI CCWWGG 2 cut(s) 744, 1197
TaaI ACNGT 1 cut(s) 161
TaiI ACGT 4 cut(s) 329, 449, 788, 805
TaqI TCGA 5 cut(s) 608, 614, 711, 838, 1095
TaqII GACCGA 1 cut(s) 127
TasI AATT 5 cut(s) 206, 269, 432, 1144, 1382
TatI WGTACW 1 cut(s) 126
TauI GCSGC 5 cut(s) 431, 527, 552, 675, 706
TfiI GAWTC 5 cut(s) 986, 1088, 1130, 1368, 1420
Tru1I TTAA 4 cut(s) 123, 435, 470, 924
Tru9I TTAA 4 cut(s) 123, 435, 470, 924
TscAI CASTG 1 cut(s) 500
TseFI GTSAC 1 cut(s) 313
TseI GCWGC 2 cut(s) 165, 421
Tsp45I GTSAC 1 cut(s) 313
TspGWI ACGGA 1 cut(s) 252
TspRI CASTG 1 cut(s) 500
Tth111I GACNNNGTC 2 cut(s) 716, 893
Van91I CCANNNNNTGG 2 cut(s) 750, 1407
VpaK11BI GGWCC 4 cut(s) 86, 571, 597, 1176
XapI RAATTY 2 cut(s) 206, 1382
XceI RCATGY 2 cut(s) 22, 1400
XcmI CCANNNNNNNNNTGG 1 cut(s) 751
XhoI CTCGAG 1 cut(s) 607
XmiI GTMKAC 1 cut(s) 711
XmnI GAANNNNTTC 2 cut(s) 935, 1219
XspI CTAG 2 cut(s) 30, 1023
ZrmI AGTACT 1 cut(s) 128
Zsp2I ATGCAT 1 cut(s) 1398
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.