MD02G1105200.v1.1

Alpha-aminoadipic semialdehyde

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
8537796 .. 8538678
883 bp
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UTR
Exon/CDS
Intron
MD02G1105200.v1.1.491

Sequence Viewer

Length: 183 bp
ATGTATGAAGATGTTGGATGTGAAATCTCTGAGGATTTGTCACATTGTGGTTTGATCCTCGGCATCAAACAGCCAAAGCTGGAGATTATTCTGCCGGATAGAGCTTATGCGTTTTTTTCGCATACTCATAAGGCTCAGAAGGAAAACATGCCACTCTTGGATAAGGATCCACCTAATCCGTAA

Protein Analysis

61

Amino Acids

6.81

Weight (kDa)

5.1

Isoelectric Point (pI)

52.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022382)

Species Orthologous Gene IDs
malus_domestica MD02G1105200.v1.1
rosa_multiflora Rmu_sc0004096.1_g000017 Rmu_sc0008498.1_g000001
rosa_samantha Rh2AG104900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 49, 161, 174
AdeI CACNNNGTG 1 cut(s) 47
AluBI AGCT 2 cut(s) 79, 104
AluI AGCT 2 cut(s) 79, 104
AlwI GGATC 3 cut(s) 49, 161, 174
BamHI GGATCC 1 cut(s) 166
BmiI GGNNCC 1 cut(s) 168
BmsI GCATC 1 cut(s) 72
BpmI CTGGAG 1 cut(s) 101
BsaBI GATNNNNATC 1 cut(s) 165
BsaJI CCNNGG 1 cut(s) 58
Bse8I GATNNNNATC 1 cut(s) 165
BseDI CCNNGG 1 cut(s) 58
BseGI GGATG 1 cut(s) 23
BseJI GATNNNNATC 1 cut(s) 165
BseMII CTCAG 2 cut(s) 21, 149
BsiSI CCGG 1 cut(s) 95
Bsp143I GATC 2 cut(s) 54, 166
BspCNI CTCAG 2 cut(s) 22, 148
BspLI GGNNCC 1 cut(s) 168
BspPI GGATC 3 cut(s) 49, 161, 174
BssECI CCNNGG 1 cut(s) 58
BssMI GATC 2 cut(s) 54, 166
BstDEI CTNAG 2 cut(s) 30, 135
BstF5I GGATG 1 cut(s) 23
BstKTI GATC 2 cut(s) 57, 169
BstMBI GATC 2 cut(s) 54, 166
BstNSI RCATGY 1 cut(s) 151
BstX2I RGATCY 1 cut(s) 166
BstYI RGATCY 1 cut(s) 166
BtsCI GGATG 1 cut(s) 23
CviAII CATG 1 cut(s) 148
CviJI RGCY 4 cut(s) 73, 79, 104, 134
CviKI_1 RGCY 4 cut(s) 73, 79, 104, 134
DdeI CTNAG 2 cut(s) 30, 135
DpnI GATC 2 cut(s) 56, 168
DpnII GATC 2 cut(s) 54, 166
DraIII CACNNNGTG 1 cut(s) 47
FaeI CATG 1 cut(s) 151
FaiI YATR 5 cut(s) 6, 108, 123, 129, 149
FatI CATG 1 cut(s) 147
FokI GGATG 1 cut(s) 30
GsuI CTGGAG 1 cut(s) 101
HapII CCGG 1 cut(s) 95
Hin1II CATG 1 cut(s) 151
HpaII CCGG 1 cut(s) 95
Hpy188I TCNGA 2 cut(s) 31, 138
HpyAV CCTTC 1 cut(s) 133
HpyF3I CTNAG 2 cut(s) 30, 135
Hsp92II CATG 1 cut(s) 151
Kzo9I GATC 2 cut(s) 54, 166
LpnPI CCDG 2 cut(s) 65, 108
LweI GCATC 1 cut(s) 72
MaeIII GTNAC 1 cut(s) 39
MalI GATC 2 cut(s) 56, 168
MboI GATC 2 cut(s) 54, 166
MboII GAAGA 1 cut(s) 20
MflI RGATCY 1 cut(s) 166
MnlI CCTC 2 cut(s) 25, 68
MspI CCGG 1 cut(s) 95
NdeII GATC 2 cut(s) 54, 166
NlaIII CATG 1 cut(s) 151
NlaIV GGNNCC 1 cut(s) 168
NmeAIII GCCGAG 1 cut(s) 39
NmuCI GTSAC 1 cut(s) 39
NspI RCATGY 1 cut(s) 151
PspN4I GGNNCC 1 cut(s) 168
PsuI RGATCY 1 cut(s) 166
Sau3AI GATC 2 cut(s) 54, 166
SetI ASST 3 cut(s) 81, 106, 175
SfaNI GCATC 1 cut(s) 72
SgeI CNNG 5 cut(s) 71, 92, 107, 160, 169
TseFI GTSAC 1 cut(s) 39
Tsp45I GTSAC 1 cut(s) 39
TspDTI ATGAA 1 cut(s) 21
TspGWI ACGGA 1 cut(s) 168
XceI RCATGY 1 cut(s) 151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.