MD02G1258800.v1.1

exocyst complex component

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
31200643 .. 31211187
10545 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1258800.v1.1.491

Sequence Viewer

Length: 1962 bp
ATGGCTGTTGTTGCCGCCGCACCGGGCGGCGATTCACTGAGCGCGAGAGCAGCCACCATGAGAGAGTCACTGCAAAAGAGCCAGACCATCACTGACAGCGTCGTCTCAATTCTTGGCTCCTTTGACCACCGCCTCTCCGCCCTCGAAACCGCCATGCGTCCTACCCAGATTAGGACGCATTCTATTCGGAAAGCTCATGAGAACATTGACAAGACCTTGAAGGCTGCTGAGGTTATATTGGCGCAATTCGATCTTTCTCGTCAGGCCGAGTCAAAGATACTGAGAGGGCCTCGTGAGGACTTGGAAAGTTATCTAGAAGCAATTGATCAGCTAAGAAGAAACATACGGTTCTTTAGTAGCACAAAAGGCTTTAGGAGTAGTGATGGAGTTATCAGTGATGCAAATGGTTTGCTTGCTAAAGCTATTTCAAAGCTGGAAGAAGAGTTCAAGCAGCTGTTATTGTCTTACAGCAAACCTGTGGAGCCTGAACGCCTTTTTGATTGCCTCCCAACCTCATTGCGGCCATCCTCAGGATCTCCTGGGAATCAGGGTGATTATGGTGGCAAGAATCCTTCATCCAATAACCATCCTGAACACCACAACAGTAACCTAGAAAATGCTGTTTACACACCTCCTGCTTTGATACCACTACGGGTTCTTCCATTGTTACATGATTTAGCCCAGCAAATGTTTCAAGCTGGTCACCACCAGCAGCTGCTAATAATTTACAGGGATACCCGTTCTTCAGTTTTGGAAGCAAGCCTCCATAAATTGGGGGTCGAAAAACTTAGCAAGGATGATGTTCAGAAAATGCAATGGGAGATTTTGGAGGCCAAGATTGGGAACTGGATTCATTACATGCGTATAGCTGTCAAATTACTCTTTGCTGGAGAACGGAAAGTTTGCGATCAAATTTTTGAAAGCTTTGATTCTCTCAGTGACCATTGTTTTGCTGAAGTTACCAGAAGTAGTGTTTCAGTTCTACTTAGTTTTGGGGAGGCAATTGCTAACAGCAAAAGATCTCCGGAAAAGTTATTTGTACTTTTAGACATGTACGAGATAATGCGGGAGCTTCACTCAGAGATTGAAACGATCTTCATAGGTAAAGCTTGTGCTGAAATTAGAGAATCAGCTTCAAGCTTGACAAAAAGGCTTGCCCAGACCGCAAAAAGTACCTTTGGGGATTTTGAAGAAGCCGTTGAAAGGGATGCAACGAAAACTGCTGTAACTGATGGCACTGTCCATCCTTTGACAAGCTATGTGATCAACTATGTGAAGTTTCTTTTTGATTACCAATCGACATTGAAGCAACTTTTCAAAGAATTTGAAAATGGAGATGAAGGTGGTTCACAATTAGCTGCTGTCACGATGCAAATAATGCAAGCTCTTCAAACCAATTTGGATGGGAAGTCTAAGCAGTACAGAGATCCAGCTTTAACTCACCTATTTCTCATGAATAATATTCACTATATGGTCAGATCTGTGCGGAGATCTGAAGCCAAAGATTTGTTGGGGGATGATTGGGTGCAAAGACACCGGAGAATTGTTCAGCAGCATGCAAACCAATACAAAAGAAATGCTTGGGGAAAGATTCTGCAGTGCCTCTCCATCCAAGGCTTGACATCATCTGGAGGTGGTAGTTCAGTAGCTGCTGATGGAGGAAGCAGTGGAGTTTCTAGAGCAATTGTTAAAGATAGGTTCAAGACGTTCAATATGCAGTTTGAGGAATTTCATCAAAAACAATCTCAGTGGACAGTTCCTGATACTGAGTTGCGAGAGTCACTAAGACTTGCAGTTGCTGAAGTCTTATTGCCTGCCTACAGATCATTCATAAAACGTTATGGGCCTCTGGTTGAGAGTGGAAAGAACCCCCAAAAGTACATCCGGTACACCGCGGAGGATCTTGAGCGAATGTTGGGTGAATTCTTCGAGGGGAGGAACGTGAACGAACCCAGGAGGTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

654

Amino Acids

73.57

Weight (kDa)

8.09

Isoelectric Point (pI)

48.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo70_N PF20669 72 - 153 8.2e-21 Exocyst complex component Exo70 N-terminal
Exo70_C PF03081 282 - 640 6.5e-135 Exo70 exocyst complex subunit C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0010765)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 101
AccB7I CCANNNNNTGG 1 cut(s) 772
AccII CGCG 2 cut(s) 44, 1895
AccIII TCCGGA 1 cut(s) 1024
AclI AACGTT 1 cut(s) 1837
AclWI GGATC 3 cut(s) 541, 1421, 1908
AcoI YGGCCR 1 cut(s) 521
AcsI RAATTY 4 cut(s) 912, 1322, 1727, 1922
AcuI CTGAAG 4 cut(s) 729, 975, 1515, 1821
AfaI GTAC 6 cut(s) 1041, 1055, 1174, 1421, 1880, 1889
AfiI CCNNNNNNNGG 6 cut(s) 171, 519, 530, 772, 840, 1203
AflIII ACRYGT 1 cut(s) 1050
AjnI CCWGG 2 cut(s) 538, 1952
AloI GAACNNNNNNTCC 2 cut(s) 428, 460
Alw26I GTCTC 1 cut(s) 109
AlwI GGATC 3 cut(s) 541, 1421, 1908
AlwNI CAGNNNCTG 4 cut(s) 715, 1649, 1760, 1799
Aor13HI TCCGGA 1 cut(s) 1024
AoxI GGCC 5 cut(s) 264, 287, 521, 831, 1844
ApeKI GCWGC 8 cut(s) 50, 224, 451, 712, 715, 1358, 1552, 1649
ApoI RAATTY 4 cut(s) 912, 1322, 1727, 1922
ArsI GACNNNNNNTTYG 2 cut(s) 932, 964
AspLEI GCGC 2 cut(s) 44, 244
AspS9I GGNCC 2 cut(s) 287, 1844
AsuC2I CCSGG 1 cut(s) 24
AsuHPI GGTGA 4 cut(s) 563, 695, 1433, 1931
AxyI CCTNAGG 1 cut(s) 529
BauI CACGAG 1 cut(s) 291
BbvCI CCTCAGC 1 cut(s) 228
BbvI GCAGC 8 cut(s) 62, 211, 463, 702, 724, 1345, 1564, 1636
BccI CCATC 9 cut(s) 95, 377, 532, 594, 1226, 1251, 1397, 1616, 1649
BceAI ACGGC 1 cut(s) 1181
BcgI CGANNNNNNTGC 2 cut(s) 167, 201
BciT130I CCWGG 2 cut(s) 540, 1954
BciVI GTATCC 1 cut(s) 727
BclI TGATCA 2 cut(s) 325, 1263
BcnI CCSGG 1 cut(s) 24
BcoDI GTCTC 1 cut(s) 109
BfaI CTAG 3 cut(s) 314, 611, 1677
BfmI CTRYAG 2 cut(s) 1595, 1819
BfuI GTATCC 1 cut(s) 727
BglII AGATCT 3 cut(s) 1019, 1478, 1490
Bme1390I CCNGG 3 cut(s) 24, 540, 1954
BmgT120I GGNCC 2 cut(s) 287, 1844
BmiI GGNNCC 2 cut(s) 118, 483
BmrFI CCNGG 3 cut(s) 24, 540, 1954
BmsI GCATC 3 cut(s) 388, 1198, 1359
BplI GAGNNNNNCTC 4 cut(s) 274, 306, 1061, 1093
BpmI CTGGAG 2 cut(s) 909, 1650
Bpu10I CCTNAGC 1 cut(s) 228
BpuEI CTTGAG 1 cut(s) 1925
BpuMI CCSGG 1 cut(s) 24
BsaJI CCNNGG 4 cut(s) 539, 1612, 1893, 1952
BsaWI WCCGGW 3 cut(s) 1024, 1536, 1884
BsaXI ACNNNNNCTCC 2 cut(s) 119, 149
Bsc4I CCNNNNNNNGG 6 cut(s) 171, 519, 530, 772, 840, 1203
Bse1I ACTGG 1 cut(s) 851
Bse21I CCTNAGG 1 cut(s) 529
Bse3DI GCAATG 2 cut(s) 515, 821
BseAI TCCGGA 1 cut(s) 1024
BseBI CCWGG 2 cut(s) 540, 1954
BseDI CCNNGG 4 cut(s) 539, 1612, 1893, 1952
BseLI CCNNNNNNNGG 6 cut(s) 171, 519, 530, 772, 840, 1203
BseMI GCAATG 2 cut(s) 515, 821
BseMII CTCAG 8 cut(s) 29, 219, 272, 543, 949, 1092, 1758, 1760
BseNI ACTGG 1 cut(s) 851
BseXI GCAGC 8 cut(s) 62, 211, 463, 702, 724, 1345, 1564, 1636
BseYI CCCAGC 1 cut(s) 681
Bsh1236I CGCG 2 cut(s) 44, 1895
BshFI GGCC 5 cut(s) 266, 289, 523, 833, 1846
BsiSI CCGG 4 cut(s) 23, 1025, 1537, 1885
BslI CCNNNNNNNGG 6 cut(s) 171, 519, 530, 772, 840, 1203
BsmAI GTCTC 1 cut(s) 109
BsmBI CGTCTC 1 cut(s) 109
BsmI GAATGC 1 cut(s) 178
BsnI GGCC 5 cut(s) 266, 289, 523, 833, 1846
Bsp13I TCCGGA 1 cut(s) 1024
BspANI GGCC 5 cut(s) 266, 289, 523, 833, 1846
BspCNI CTCAG 8 cut(s) 30, 220, 273, 542, 948, 1091, 1759, 1759
BspEI TCCGGA 1 cut(s) 1024
BspFNI CGCG 2 cut(s) 44, 1895
BspHI TCATGA 2 cut(s) 196, 1452
BspLI GGNNCC 2 cut(s) 118, 483
BspMAI CTGCAG 1 cut(s) 1599
BspPI GGATC 3 cut(s) 541, 1421, 1908
BspQI GCTCTTC 1 cut(s) 1392
BsrDI GCAATG 2 cut(s) 515, 821
BsrI ACTGG 1 cut(s) 851
BssECI CCNNGG 4 cut(s) 539, 1612, 1893, 1952
BssSI CACGAG 1 cut(s) 291
BssT1I CCWWGG 1 cut(s) 1612
Bst2BI CACGAG 1 cut(s) 291
Bst2UI CCWGG 2 cut(s) 540, 1954
Bst4CI ACNGT 4 cut(s) 348, 605, 1240, 1756
Bst6I CTCTTC 2 cut(s) 435, 1392
BstAPI GCANNNNNTGC 1 cut(s) 1378
BstC8I GCNNGC 6 cut(s) 414, 760, 1155, 1383, 1557, 1815
BstDSI CCRYGG 1 cut(s) 1893
BstEII GGTNACC 1 cut(s) 701
BstFNI CGCG 2 cut(s) 44, 1895
BstHHI GCGC 2 cut(s) 44, 244
BstMAI GTCTC 1 cut(s) 109
BstMWI GCNNNNNNNGC 5 cut(s) 11, 50, 366, 1163, 1378
BstNI CCWGG 2 cut(s) 540, 1954
BstNSI RCATGY 3 cut(s) 862, 1054, 1559
BstPI GGTNACC 1 cut(s) 701
BstSCI CCNGG 3 cut(s) 22, 538, 1952
BstSFI CTRYAG 2 cut(s) 1595, 1819
BstUI CGCG 2 cut(s) 44, 1895
BstV1I GCAGC 8 cut(s) 62, 211, 463, 702, 724, 1345, 1564, 1636
BstX2I RGATCY 6 cut(s) 533, 1019, 1426, 1478, 1490, 1900
BstYI RGATCY 6 cut(s) 533, 1019, 1426, 1478, 1490, 1900
Bsu36I CCTNAGG 1 cut(s) 529
BsuI GTATCC 1 cut(s) 727
BsuRI GGCC 5 cut(s) 266, 289, 523, 833, 1846
BtgI CCRYGG 1 cut(s) 1893
BtsI GCAGTG 3 cut(s) 68, 1604, 1672
BtsIMutI CAGTG 9 cut(s) 35, 68, 90, 400, 943, 1236, 1604, 1672, 1754
Cac8I GCNNGC 6 cut(s) 414, 760, 1155, 1383, 1557, 1815
CaiI CAGNNNCTG 4 cut(s) 715, 1649, 1760, 1799
CciI TCATGA 2 cut(s) 196, 1452
CfoI GCGC 2 cut(s) 44, 244
Cfr13I GGNCC 2 cut(s) 287, 1844
Cfr42I CCGCGG 1 cut(s) 1896
CseI GACGC 3 cut(s) 88, 146, 184
Csp6I GTAC 6 cut(s) 1040, 1054, 1173, 1420, 1879, 1888
CspCI CAANNNNNGTGG 2 cut(s) 1730, 1765
CviAII CATG 8 cut(s) 58, 154, 197, 671, 859, 1051, 1453, 1556
CviQI GTAC 6 cut(s) 1040, 1054, 1173, 1420, 1879, 1888
DrdI GACNNNNNNGTC 1 cut(s) 101
DseDI GACNNNNNNGTC 1 cut(s) 101
EaeI YGGCCR 1 cut(s) 521
Eam1104I CTCTTC 2 cut(s) 435, 1392
EarI CTCTTC 2 cut(s) 435, 1392
EciI GGCGGA 1 cut(s) 127
Eco130I CCWWGG 1 cut(s) 1612
Eco57I CTGAAG 4 cut(s) 729, 975, 1515, 1821
Eco81I CCTNAGG 1 cut(s) 529
Eco91I GGTNACC 1 cut(s) 701
EcoO109I RGGNCCY 1 cut(s) 287
EcoO65I GGTNACC 1 cut(s) 701
EcoRI GAATTC 1 cut(s) 1922
EcoRII CCWGG 2 cut(s) 538, 1952
EcoT14I CCWWGG 1 cut(s) 1612
ErhI CCWWGG 1 cut(s) 1612
Esp3I CGTCTC 1 cut(s) 109
FaeI CATG 8 cut(s) 61, 157, 200, 674, 862, 1054, 1456, 1559
FalI AAGNNNNNCTT 2 cut(s) 1564, 1596
FatI CATG 8 cut(s) 57, 153, 196, 670, 858, 1050, 1452, 1555
FauI CCCGC 1 cut(s) 1059
FbaI TGATCA 2 cut(s) 325, 1263
FspBI CTAG 3 cut(s) 314, 611, 1677
GlaI GCGC 2 cut(s) 43, 243
GsaI CCCAGC 1 cut(s) 685
GsuI CTGGAG 2 cut(s) 909, 1650
HaeIII GGCC 5 cut(s) 266, 289, 523, 833, 1846
HapII CCGG 4 cut(s) 23, 1025, 1537, 1885
HgaI GACGC 3 cut(s) 88, 146, 184
HhaI GCGC 2 cut(s) 44, 244
Hin1II CATG 8 cut(s) 61, 157, 200, 674, 862, 1054, 1456, 1559
Hin6I GCGC 2 cut(s) 42, 242
HinP1I GCGC 2 cut(s) 42, 242
HindIII AAGCTT 3 cut(s) 922, 1107, 1138
HpaII CCGG 4 cut(s) 23, 1025, 1537, 1885
HphI GGTGA 4 cut(s) 563, 695, 1433, 1931
Hpy166II GTNNAC 5 cut(s) 625, 1349, 1752, 1890, 1945
Hpy188I TCNGA 5 cut(s) 189, 807, 1081, 1478, 1495
Hpy8I GTNNAC 5 cut(s) 625, 1349, 1752, 1890, 1945
Hpy99I CGWCG 1 cut(s) 104
HpyAV CCTTC 3 cut(s) 214, 582, 1334
HpyCH4III ACNGT 4 cut(s) 348, 605, 1240, 1756
HpyCH4IV ACGT 3 cut(s) 1706, 1837, 1941
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 50, 366, 1163, 1378
HpySE526I ACGT 3 cut(s) 1706, 1837, 1941
Hsp92II CATG 8 cut(s) 61, 157, 200, 674, 862, 1054, 1456, 1559
HspAI GCGC 2 cut(s) 42, 242
Kpn2I TCCGGA 1 cut(s) 1024
Ksp22I TGATCA 2 cut(s) 325, 1263
KspI CCGCGG 1 cut(s) 1896
LguI GCTCTTC 1 cut(s) 1392
LmnI GCTCC 3 cut(s) 122, 481, 1069
Lsp1109I GCAGC 8 cut(s) 62, 211, 463, 702, 724, 1345, 1564, 1636
LweI GCATC 3 cut(s) 388, 1198, 1359
MaeI CTAG 3 cut(s) 314, 611, 1677
MaeII ACGT 3 cut(s) 1706, 1837, 1941
MaeIII GTNAC 9 cut(s) 66, 605, 666, 701, 938, 958, 1225, 1363, 1779
MboII GAAGA 9 cut(s) 348, 449, 452, 650, 735, 1087, 1202, 1379, 1918
MfeI CAATTG 3 cut(s) 321, 1002, 1683
MflI RGATCY 6 cut(s) 533, 1019, 1426, 1478, 1490, 1900
MlyI GAGTC 3 cut(s) 74, 278, 1787
MroI TCCGGA 1 cut(s) 1024
MseI TTAA 2 cut(s) 1436, 1689
MspA1I CMGCKG 3 cut(s) 454, 715, 1895
MspI CCGG 4 cut(s) 23, 1025, 1537, 1885
MspR9I CCNGG 3 cut(s) 24, 540, 1954
MunI CAATTG 3 cut(s) 321, 1002, 1683
Mva1269I GAATGC 1 cut(s) 178
MvaI CCWGG 2 cut(s) 540, 1954
MvnI CGCG 2 cut(s) 44, 1895
MwoI GCNNNNNNNGC 5 cut(s) 11, 50, 366, 1163, 1378
NciI CCSGG 1 cut(s) 24
NlaIII CATG 8 cut(s) 61, 157, 200, 674, 862, 1054, 1456, 1559
NlaIV GGNNCC 2 cut(s) 118, 483
NmeAIII GCCGAG 1 cut(s) 292
NmuCI GTSAC 5 cut(s) 66, 701, 938, 1363, 1779
NspI RCATGY 3 cut(s) 862, 1054, 1559
PaeI GCATGC 1 cut(s) 1559
PagI TCATGA 2 cut(s) 196, 1452
PciI ACATGT 1 cut(s) 1050
PciSI GCTCTTC 1 cut(s) 1392
PctI GAATGC 1 cut(s) 178
PfeI GAWTC 7 cut(s) 32, 544, 568, 850, 929, 1127, 1591
PflFI GACNNNGTC 1 cut(s) 98
PflMI CCANNNNNTGG 1 cut(s) 772
PleI GAGTC 3 cut(s) 73, 277, 1786
PpsI GAGTC 3 cut(s) 73, 277, 1786
PscI ACATGT 1 cut(s) 1050
Psp1406I AACGTT 1 cut(s) 1837
Psp6I CCWGG 2 cut(s) 538, 1952
PspEI GGTNACC 1 cut(s) 701
PspFI CCCAGC 1 cut(s) 681
PspGI CCWGG 2 cut(s) 538, 1952
PspN4I GGNNCC 2 cut(s) 118, 483
PspPI GGNCC 2 cut(s) 287, 1844
PstI CTGCAG 1 cut(s) 1599
PstNI CAGNNNCTG 4 cut(s) 715, 1649, 1760, 1799
PsuI RGATCY 6 cut(s) 533, 1019, 1426, 1478, 1490, 1900
PsyI GACNNNGTC 1 cut(s) 98
PvuII CAGCTG 2 cut(s) 454, 715
RsaI GTAC 6 cut(s) 1041, 1055, 1174, 1421, 1880, 1889
RsaNI GTAC 6 cut(s) 1040, 1054, 1173, 1420, 1879, 1888
SacII CCGCGG 1 cut(s) 1896
SapI GCTCTTC 1 cut(s) 1392
SaqAI TTAA 2 cut(s) 1436, 1689
Sau96I GGNCC 2 cut(s) 287, 1844
SchI GAGTC 3 cut(s) 74, 278, 1787
ScrFI CCNGG 3 cut(s) 24, 540, 1954
SfaNI GCATC 3 cut(s) 388, 1198, 1359
SfcI CTRYAG 2 cut(s) 1595, 1819
Sfr303I CCGCGG 1 cut(s) 1896
SgrBI CCGCGG 1 cut(s) 1896
SmlI CTYRAG 1 cut(s) 1904
SmoI CTYRAG 1 cut(s) 1904
SphI GCATGC 1 cut(s) 1559
SspI AATATT 1 cut(s) 1462
SspMI CTAG 3 cut(s) 314, 611, 1677
StyD4I CCNGG 3 cut(s) 22, 538, 1952
StyI CCWWGG 1 cut(s) 1612
TaaI ACNGT 4 cut(s) 348, 605, 1240, 1756
TaiI ACGT 3 cut(s) 1709, 1840, 1944
TaqI TCGA 5 cut(s) 144, 249, 780, 1298, 1929
TatI WGTACW 3 cut(s) 1039, 1419, 1878
TauI GCSGC 4 cut(s) 17, 20, 30, 523
TfiI GAWTC 7 cut(s) 32, 544, 568, 850, 929, 1127, 1591
Tru1I TTAA 2 cut(s) 1436, 1689
Tru9I TTAA 2 cut(s) 1436, 1689
TscAI CASTG 9 cut(s) 42, 75, 97, 400, 943, 1243, 1604, 1672, 1754
TseFI GTSAC 5 cut(s) 66, 701, 938, 1363, 1779
TseI GCWGC 8 cut(s) 50, 224, 451, 712, 715, 1358, 1552, 1649
Tsp45I GTSAC 5 cut(s) 66, 701, 938, 1363, 1779
TspDTI ATGAA 7 cut(s) 564, 842, 1087, 1353, 1469, 1721, 1819
TspGWI ACGGA 1 cut(s) 910
TspRI CASTG 9 cut(s) 42, 75, 97, 400, 943, 1243, 1604, 1672, 1754
Tth111I GACNNNGTC 1 cut(s) 98
Van91I CCANNNNNTGG 1 cut(s) 772
XapI RAATTY 4 cut(s) 912, 1322, 1727, 1922
XbaI TCTAGA 2 cut(s) 313, 1676
XceI RCATGY 3 cut(s) 862, 1054, 1559
XcmI CCANNNNNNNNNTGG 1 cut(s) 1507
XspI CTAG 3 cut(s) 314, 611, 1677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.