MD03G1015200.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
1211327 .. 1211873
547 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1015200.v1.1.491

Sequence Viewer

Length: 144 bp
ATGCTTCGTTGCCGGAATATTCCAGTGTCCTTGTGGGCGAGCATTCATCTGTGTTTGGAAGTAAAGGACGAGAAAGCGATGAAGATGGCACCAGGGACGAGGAAGGCACTGCTGTCTTTAGTTCGTCCTGGTTACCAGGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

48

Amino Acids

5.34

Weight (kDa)

9.59

Isoelectric Point (pI)

55.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024335)

Species Orthologous Gene IDs
malus_domestica MD03G1015200.v1.1
pyrus_communis pycom03g01310 pycom03g01330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 88
AjnI CCWGG 3 cut(s) 91, 127, 135
BanI GGYRCC 1 cut(s) 88
BccI CCATC 1 cut(s) 79
BciT130I CCWGG 3 cut(s) 93, 129, 137
Bme1390I CCNGG 3 cut(s) 93, 129, 137
BmiI GGNNCC 1 cut(s) 90
BmrFI CCNGG 3 cut(s) 93, 129, 137
BsaJI CCNNGG 1 cut(s) 92
Bse1I ACTGG 1 cut(s) 23
BseBI CCWGG 3 cut(s) 93, 129, 137
BseDI CCNNGG 1 cut(s) 92
BseNI ACTGG 1 cut(s) 23
BshNI GGYRCC 1 cut(s) 88
BsiSI CCGG 1 cut(s) 13
BslFI GGGAC 1 cut(s) 109
BsmFI GGGAC 1 cut(s) 109
BsmI GAATGC 1 cut(s) 42
BspLI GGNNCC 1 cut(s) 90
BspT107I GGYRCC 1 cut(s) 88
BsrI ACTGG 1 cut(s) 23
BssECI CCNNGG 1 cut(s) 92
Bst2UI CCWGG 3 cut(s) 93, 129, 137
BstC8I GCNNGC 1 cut(s) 40
BstEII GGTNACC 1 cut(s) 131
BstNI CCWGG 3 cut(s) 93, 129, 137
BstPI GGTNACC 1 cut(s) 131
BstSCI CCNGG 3 cut(s) 91, 127, 135
BtgZI GCGATG 1 cut(s) 92
BtsI GCAGTG 1 cut(s) 107
BtsIMutI CAGTG 2 cut(s) 30, 107
Cac8I GCNNGC 1 cut(s) 40
Eco91I GGTNACC 1 cut(s) 131
EcoO65I GGTNACC 1 cut(s) 131
EcoRII CCWGG 3 cut(s) 91, 127, 135
FaqI GGGAC 1 cut(s) 109
HapII CCGG 1 cut(s) 13
HpaII CCGG 1 cut(s) 13
HpyAV CCTTC 1 cut(s) 97
LpnPI CCDG 6 cut(s) 26, 36, 78, 105, 114, 122
MaeIII GTNAC 1 cut(s) 131
MboII GAAGA 1 cut(s) 94
MnlI CCTC 1 cut(s) 93
MspI CCGG 1 cut(s) 13
MspR9I CCNGG 3 cut(s) 93, 129, 137
Mva1269I GAATGC 1 cut(s) 42
MvaI CCWGG 3 cut(s) 93, 129, 137
NlaIV GGNNCC 1 cut(s) 90
PctI GAATGC 1 cut(s) 42
Psp6I CCWGG 3 cut(s) 91, 127, 135
PspEI GGTNACC 1 cut(s) 131
PspGI CCWGG 3 cut(s) 91, 127, 135
PspN4I GGNNCC 1 cut(s) 90
ScrFI CCNGG 3 cut(s) 93, 129, 137
SgeI CNNG 9 cut(s) 25, 35, 43, 51, 82, 104, 105, 111, 140
SspI AATATT 1 cut(s) 19
StyD4I CCNGG 3 cut(s) 91, 127, 135
TscAI CASTG 2 cut(s) 30, 114
TspDTI ATGAA 2 cut(s) 35, 95
TspRI CASTG 2 cut(s) 30, 114
XcmI CCANNNNNNNNNTGG 1 cut(s) 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.