MD03G1105800.v1.1
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
9086560 .. 9090677
4118 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1105800.v1.1.491

Sequence Viewer

Length: 2010 bp
ATGATGGTCCTTGTTATGGTTTTTCGTTGCTTATTGTTTCAGGTCAATCAAAAAATGATGAAATCTGCTTTGATCAAGGATTTGTATTCTGAGATTGATCGGCTCAAGCAAGAGGTATATGCTGCCAGAGAGAAGAATGGAATCTATATACCACGAGATCGTTATCTTAGTGAAGAAGCAGAGAAGAAGGCAATGGCTGAAAAGATAGAACGGATGGATCATGATTCTGAATCCAAAGACAAGCAGCAATTGCTGGAGCTTCAGGAACTTTACAGTTCTCAGCAACTTTTGGCTGTAGAATTGGGCGATAAACTTGAAAAAACTGAGAAAAAGCTTGAGGAAACTGGACATGCACTGTTTGATCTCGAGGACAAACATCGACAAGCAAATGCGACCGTCAAAGAGAAGGAATTTCTGATAGTAAATCTTCTCAAATCGGAAAGATCACTTGTCGAGCGTGCATTTGAGCTGCGAGCAGAGCTAGAGAATGCTGCATCAGATGTGTCCAGTTTATTTGCTAAAATTGAGTGTAAGGACAAGATTGAAGATGGAAACCGGATACTAGTCCAGAAATTCCAGTCCCAATTAACTCAGCAGCTTGAAGTCCTGCATAAAACCGTGGCAGTTGCAGTGACACAACAAGAACAGCAATTGAAAGATATGGAAGAGGACATGCAGTCCTTTGTATCAACGAAGGCAGGGGCTACTGAAGAACTGCGAGGAAGATTAGGAAAGCTTAAAAACATGTATGGTTCTGGTATTAAAGCTCTGGATGGTATAGCTGGGGATCTTGAAGGAAATTCGCAATCAACATTTTCTCATCTAAACTCTGAAGTTTCTAACCATTCTTCTGCTCTGGAAGATCTCTTCAAAGGAATCGCTTCCGAAGCTGATGCGTTACTCAATGATCTTCAAGGCAATCTTCACAACCAAGAAGAGAAGCTAAGGGCATTTGCACAACAACAGCGTGAGGCTCATGCAAGAGCAGTTGAAACTGCACGGTCAGTTTCTAAAGTTACTGTGGACTTCTTCAAAACTCTAGACTTGCATGCATCCAGTCTGACCCAAATTGTGGAAGAAGCACAAACTGCCAACGACAAGAAATTGTCTGAACTTGAAGATAAGTTTGAGGAGTGTGCTGCTAATGAAGAAAGGCAGTTACTAGAGAAAGTGGCAGAGCTGCTGACAAGTTCAAATGCCAGGAAGAAAAGACTGGTCCAAACTGCAGTAAAGGATCTTCGAGAGAGCGCAACAAGCAGAACCACCAAATTACAGCAAGAAATGTCGACCATGCAAGGTTCAACTTCTTCTATAAAAGCAAAGTGGACACTTCACATGGAAACAACAGAATCCCATTACCATGAAGATACTTCGGCTGTGGAATGTGGAAAGAAAGGCATGGAGGAGGTTCTACAGAATTGTTTGAAGCAGGCGTCAATGGGTGCAGAACAATGGAAGAAAGCTCAGGGGTCCTTGCTCACTCTAGAAAAGAGAAATGTTTCTTCTGTGGATTCCGTTGTTAGGGGAACGGAAGCGGATCAAGCCTTACGTGAAAAGTTTTCCTTGGCTGTGTCAACTGCACTAGAAGATGTAGATGTTGCAGACAAGAATCTCCTTTCTTCCATAGATCATTCATTACAACTTGACCGTGAGGCGTGTGGAAATCTGAACTCAATGATTGTTCCATGTTGCGGGGATCTGAGGGAACTAAAGGGAGGTCACTACCATAATATTGTTGAAATCACCGAAAATGCAGGAAAATTTCTTCTCGATGAATATGTGGTGGATGAACCATCATGTTCCACACCAAGAAAGAGGTCATTCAATCTTCCAAGCGTTGCATCCATTGAAGAACTCAGGACTCCTGCTTTTGAGGAATTGTTGAGGTTATTCTGGGATGGAAGATCGGCAAAACAGCAAGCAAATGGTGACCTAAAACACATCACAGGGGCGTACGAGGCTGCTCAATCCATTAGAGACTCCAGAGTTCCCCTCACTGCTATTAACTAA

Protein Analysis

670

Amino Acids

75.17

Weight (kDa)

5.35

Isoelectric Point (pI)

48.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024343)

Species Orthologous Gene IDs
malus_domestica MD03G1105800.v1.1
pyrus_communis pycom11g09920
rosa_multiflora Rmu_sc0017669.1_g000014

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1072
AccI GTMKAC 1 cut(s) 1286
AciI CCGC 2 cut(s) 1535, 1692
AclWI GGATC 5 cut(s) 225, 795, 1242, 1545, 1704
AcsI RAATTY 4 cut(s) 410, 572, 799, 1760
AcuI CTGAAG 3 cut(s) 245, 729, 852
AcyI GRCGYC 1 cut(s) 1433
AfaI GTAC 1 cut(s) 1955
AfiI CCNNNNNNNGG 4 cut(s) 16, 1072, 1521, 1691
AflIII ACRYGT 1 cut(s) 744
AhdI GACNNNNNGTC 1 cut(s) 676
AhlI ACTAGT 1 cut(s) 562
AjnI CCWGG 1 cut(s) 1199
Alw26I GTCTC 1 cut(s) 1971
AlwI GGATC 5 cut(s) 225, 795, 1242, 1545, 1704
Ama87I CYCGRG 1 cut(s) 365
ApeKI GCWGC 8 cut(s) 122, 244, 469, 491, 595, 1139, 1180, 1961
ApoI RAATTY 4 cut(s) 410, 572, 799, 1760
Asp700I GAANNNNTTC 2 cut(s) 880, 1498
AspLEI GCGC 1 cut(s) 1250
AspS9I GGNCC 3 cut(s) 7, 1216, 1470
AsuHPI GGTGA 2 cut(s) 1735, 1940
AvaI CYCGRG 1 cut(s) 365
AvaII GGWCC 3 cut(s) 7, 1216, 1470
BarI GAAGNNNNNNTAC 2 cut(s) 1221, 1253
BauI CACGAG 1 cut(s) 153
BbvI GCAGC 8 cut(s) 109, 256, 456, 478, 607, 1126, 1167, 1948
BccI CCATC 5 cut(s) 208, 542, 767, 1801, 1892
BcgI CGANNNNNNTGC 2 cut(s) 875, 909
BciT130I CCWGG 1 cut(s) 1201
BciVI GTATCC 1 cut(s) 552
BclI TGATCA 1 cut(s) 72
BcoDI GTCTC 1 cut(s) 1971
BcuI ACTAGT 1 cut(s) 562
BfaI CTAG 6 cut(s) 482, 563, 1040, 1163, 1484, 1583
BfmI CTRYAG 3 cut(s) 294, 1224, 1412
BfuI GTATCC 1 cut(s) 552
BglII AGATCT 1 cut(s) 862
BisI GCNGC 8 cut(s) 123, 245, 470, 492, 596, 1140, 1181, 1962
BlsI GCNGC 8 cut(s) 124, 246, 471, 493, 597, 1141, 1182, 1963
Bme1390I CCNGG 1 cut(s) 1201
Bme18I GGWCC 3 cut(s) 7, 1216, 1470
BmeRI GACNNNNNGTC 1 cut(s) 676
BmeT110I CYCGRG 1 cut(s) 365
BmgT120I GGNCC 3 cut(s) 7, 1216, 1470
BmiI GGNNCC 1 cut(s) 1471
BmrFI CCNGG 1 cut(s) 1201
BmsI GCATC 4 cut(s) 503, 883, 1061, 1850
BplI GAGNNNNNCTC 2 cut(s) 1977, 2009
BpmI CTGGAG 2 cut(s) 275, 1966
Bpu10I CCTNAGC 2 cut(s) 944, 1464
BpuEI CTTGAG 2 cut(s) 89, 356
BsaAI YACGTR 1 cut(s) 1550
BsaBI GATNNNNATC 1 cut(s) 162
BsaHI GRCGYC 1 cut(s) 1433
BsaJI CCNNGG 2 cut(s) 618, 1563
BsaWI WCCGGW 1 cut(s) 555
Bsc4I CCNNNNNNNGG 4 cut(s) 16, 1072, 1521, 1691
Bse1I ACTGG 5 cut(s) 349, 507, 577, 1056, 1218
Bse3DI GCAATG 1 cut(s) 198
Bse8I GATNNNNATC 1 cut(s) 162
BseBI CCWGG 1 cut(s) 1201
BseDI CCNNGG 2 cut(s) 618, 1563
BseGI GGATG 6 cut(s) 219, 778, 1052, 1792, 1841, 1903
BseJI GATNNNNATC 1 cut(s) 162
BseLI CCNNNNNNNGG 4 cut(s) 16, 1072, 1521, 1691
BseMI GCAATG 1 cut(s) 198
BseMII CTCAG 7 cut(s) 81, 293, 315, 605, 1478, 1691, 1870
BseNI ACTGG 5 cut(s) 349, 507, 577, 1056, 1218
BseRI GAGGAG 2 cut(s) 1145, 1418
BseXI GCAGC 8 cut(s) 109, 256, 456, 478, 607, 1126, 1167, 1948
BseYI CCCAGC 1 cut(s) 782
BsgI GTGCAG 3 cut(s) 981, 1464, 1563
Bsh1285I CGRYCG 1 cut(s) 396
BsiEI CGRYCG 1 cut(s) 396
BsiHKCI CYCGRG 1 cut(s) 365
BsiSI CCGG 1 cut(s) 556
BsiWI CGTACG 1 cut(s) 1953
BslFI GGGAC 1 cut(s) 565
BslI CCNNNNNNNGG 4 cut(s) 16, 1072, 1521, 1691
BsmAI GTCTC 1 cut(s) 1971
BsmFI GGGAC 1 cut(s) 565
BsmI GAATGC 1 cut(s) 493
BsoBI CYCGRG 1 cut(s) 365
BspACI CCGC 2 cut(s) 1535, 1692
BspCNI CTCAG 7 cut(s) 82, 292, 316, 604, 1477, 1692, 1869
BspHI TCATGA 1 cut(s) 220
BspLI GGNNCC 1 cut(s) 1471
BspMAI CTGCAG 1 cut(s) 1228
BspPI GGATC 5 cut(s) 225, 795, 1242, 1545, 1704
BsrDI GCAATG 1 cut(s) 198
BsrI ACTGG 5 cut(s) 349, 507, 577, 1056, 1218
BssECI CCNNGG 2 cut(s) 618, 1563
BssNI GRCGYC 1 cut(s) 1433
BssSI CACGAG 1 cut(s) 153
BssT1I CCWWGG 1 cut(s) 1563
Bst2BI CACGAG 1 cut(s) 153
Bst2UI CCWGG 1 cut(s) 1201
Bst4CI ACNGT 7 cut(s) 275, 357, 397, 619, 1002, 1021, 1649
Bst6I CTCTTC 3 cut(s) 660, 872, 930
BstACI GRCGYC 1 cut(s) 1433
BstAPI GCANNNNNTGC 2 cut(s) 250, 1088
BstBAI YACGTR 1 cut(s) 1550
BstC8I GCNNGC 5 cut(s) 459, 474, 1050, 1431, 1920
BstDEI CTNAG 9 cut(s) 90, 167, 279, 324, 591, 944, 1464, 1700, 1856
BstDSI CCRYGG 1 cut(s) 618
BstEII GGTNACC 1 cut(s) 1928
BstF5I GGATG 6 cut(s) 219, 778, 1052, 1792, 1841, 1903
BstHHI GCGC 1 cut(s) 1250
BstMAI GTCTC 1 cut(s) 1971
BstMCI CGRYCG 1 cut(s) 396
BstMWI GCNNNNNNNGC 7 cut(s) 250, 478, 887, 1088, 1254, 1541, 1958
BstNI CCWGG 1 cut(s) 1201
BstNSI RCATGY 4 cut(s) 353, 676, 748, 1052
BstPI GGTNACC 1 cut(s) 1928
BstSCI CCNGG 1 cut(s) 1199
BstSFI CTRYAG 3 cut(s) 294, 1224, 1412
BstV1I GCAGC 8 cut(s) 109, 256, 456, 478, 607, 1126, 1167, 1948
BstX2I RGATCY 4 cut(s) 787, 862, 1234, 1696
BstYI RGATCY 4 cut(s) 787, 862, 1234, 1696
BsuI GTATCC 1 cut(s) 552
BtgI CCRYGG 1 cut(s) 618
BtsCI GGATG 6 cut(s) 219, 778, 1052, 1792, 1841, 1903
BtsI GCAGTG 2 cut(s) 636, 1995
BtsIMutI CAGTG 3 cut(s) 353, 636, 1995
Cac8I GCNNGC 5 cut(s) 459, 474, 1050, 1431, 1920
CciI TCATGA 1 cut(s) 220
CfoI GCGC 1 cut(s) 1250
Cfr13I GGNCC 3 cut(s) 7, 1216, 1470
CseI GACGC 1 cut(s) 1422
Csp6I GTAC 1 cut(s) 1954
CviQI GTAC 1 cut(s) 1954
DdeI CTNAG 9 cut(s) 90, 167, 279, 324, 591, 944, 1464, 1700, 1856
DriI GACNNNNNGTC 1 cut(s) 676
Eam1104I CTCTTC 3 cut(s) 660, 872, 930
Eam1105I GACNNNNNGTC 1 cut(s) 676
EarI CTCTTC 3 cut(s) 660, 872, 930
Eco130I CCWWGG 1 cut(s) 1563
Eco47I GGWCC 3 cut(s) 7, 1216, 1470
Eco57I CTGAAG 3 cut(s) 245, 729, 852
Eco88I CYCGRG 1 cut(s) 365
Eco91I GGTNACC 1 cut(s) 1928
EcoO109I RGGNCCY 1 cut(s) 1470
EcoO65I GGTNACC 1 cut(s) 1928
EcoRII CCWGG 1 cut(s) 1199
EcoT14I CCWWGG 1 cut(s) 1563
EcoT22I ATGCAT 1 cut(s) 1054
ErhI CCWWGG 1 cut(s) 1563
FalI AAGNNNNNCTT 4 cut(s) 906, 938, 1547, 1579
FaqI GGGAC 1 cut(s) 565
FauI CCCGC 1 cut(s) 1685
FbaI TGATCA 1 cut(s) 72
FblI GTMKAC 1 cut(s) 1286
Fnu4HI GCNGC 8 cut(s) 123, 245, 470, 492, 596, 1140, 1181, 1962
FokI GGATG 6 cut(s) 226, 785, 1039, 1799, 1828, 1910
Fsp4HI GCNGC 8 cut(s) 123, 245, 470, 492, 596, 1140, 1181, 1962
FspBI CTAG 6 cut(s) 482, 563, 1040, 1163, 1484, 1583
GlaI GCGC 1 cut(s) 1249
GluI GCNGC 8 cut(s) 123, 245, 470, 492, 596, 1140, 1181, 1962
GsaI CCCAGC 1 cut(s) 786
GsuI CTGGAG 2 cut(s) 275, 1966
HapII CCGG 1 cut(s) 556
HgaI GACGC 1 cut(s) 1422
HhaI GCGC 1 cut(s) 1250
Hin1I GRCGYC 1 cut(s) 1433
Hin6I GCGC 1 cut(s) 1248
HinP1I GCGC 1 cut(s) 1248
HincII GTYRAC 2 cut(s) 1287, 1575
HindII GTYRAC 2 cut(s) 1287, 1575
HindIII AAGCTT 2 cut(s) 332, 734
HinfI GANTC 9 cut(s) 141, 224, 230, 876, 1349, 1511, 1609, 1861, 1979
HpaII CCGG 1 cut(s) 556
HphI GGTGA 2 cut(s) 1735, 1940
Hpy166II GTNNAC 4 cut(s) 1024, 1287, 1326, 1575
Hpy8I GTNNAC 4 cut(s) 1024, 1287, 1326, 1575
HpyAV CCTTC 4 cut(s) 181, 400, 688, 788
HpyCH4III ACNGT 7 cut(s) 275, 357, 397, 619, 1002, 1021, 1649
HpyCH4IV ACGT 1 cut(s) 1549
HpyF10VI GCNNNNNNNGC 7 cut(s) 250, 478, 887, 1088, 1254, 1541, 1958
HpyF3I CTNAG 9 cut(s) 90, 167, 279, 324, 591, 944, 1464, 1700, 1856
HpySE526I ACGT 1 cut(s) 1549
Hsp92I GRCGYC 1 cut(s) 1433
HspAI GCGC 1 cut(s) 1248
Ksp22I TGATCA 1 cut(s) 72
LmnI GCTCC 1 cut(s) 256
Lsp1109I GCAGC 8 cut(s) 109, 256, 456, 478, 607, 1126, 1167, 1948
LweI GCATC 4 cut(s) 503, 883, 1061, 1850
MaeI CTAG 6 cut(s) 482, 563, 1040, 1163, 1484, 1583
MaeII ACGT 1 cut(s) 1549
MaeIII GTNAC 6 cut(s) 631, 897, 1015, 1158, 1718, 1928
MfeI CAATTG 2 cut(s) 248, 650
MflI RGATCY 4 cut(s) 787, 862, 1234, 1696
MlyI GAGTC 2 cut(s) 1855, 1973
Mph1103I ATGCAT 1 cut(s) 1054
MroXI GAANNNNTTC 2 cut(s) 880, 1498
MseI TTAA 4 cut(s) 587, 738, 762, 2004
MslI CAYNNNNRTG 1 cut(s) 1359
MspI CCGG 1 cut(s) 556
MspR9I CCNGG 1 cut(s) 1201
MunI CAATTG 2 cut(s) 248, 650
Mva1269I GAATGC 1 cut(s) 493
MvaI CCWGG 1 cut(s) 1201
MwoI GCNNNNNNNGC 7 cut(s) 250, 478, 887, 1088, 1254, 1541, 1958
NlaIV GGNNCC 1 cut(s) 1471
NmuCI GTSAC 3 cut(s) 631, 1718, 1928
NsiI ATGCAT 1 cut(s) 1054
NspI RCATGY 4 cut(s) 353, 676, 748, 1052
PaeI GCATGC 1 cut(s) 1052
PaeR7I CTCGAG 1 cut(s) 365
PagI TCATGA 1 cut(s) 220
PciI ACATGT 1 cut(s) 744
PctI GAATGC 1 cut(s) 493
PdmI GAANNNNTTC 2 cut(s) 880, 1498
PfeI GAWTC 7 cut(s) 141, 224, 230, 876, 1349, 1511, 1609
Pfl23II CGTACG 1 cut(s) 1953
PflMI CCANNNNNTGG 1 cut(s) 1072
PkrI GCNGC 8 cut(s) 124, 246, 471, 493, 597, 1141, 1182, 1963
PleI GAGTC 2 cut(s) 1855, 1973
PpsI GAGTC 2 cut(s) 1855, 1973
Ppu21I YACGTR 1 cut(s) 1550
PpuMI RGGWCCY 1 cut(s) 1470
PscI ACATGT 1 cut(s) 744
Psp5II RGGWCCY 1 cut(s) 1470
Psp6I CCWGG 1 cut(s) 1199
PspEI GGTNACC 1 cut(s) 1928
PspFI CCCAGC 1 cut(s) 782
PspGI CCWGG 1 cut(s) 1199
PspLI CGTACG 1 cut(s) 1953
PspN4I GGNNCC 1 cut(s) 1471
PspPI GGNCC 3 cut(s) 7, 1216, 1470
PspPPI RGGWCCY 1 cut(s) 1470
PstI CTGCAG 1 cut(s) 1228
PsuI RGATCY 4 cut(s) 787, 862, 1234, 1696
RsaI GTAC 1 cut(s) 1955
RsaNI GTAC 1 cut(s) 1954
RseI CAYNNNNRTG 1 cut(s) 1359
SalI GTCGAC 1 cut(s) 1285
SaqAI TTAA 4 cut(s) 587, 738, 762, 2004
SatI GCNGC 8 cut(s) 123, 245, 470, 492, 596, 1140, 1181, 1962
Sau96I GGNCC 3 cut(s) 7, 1216, 1470
SchI GAGTC 2 cut(s) 1855, 1973
ScrFI CCNGG 1 cut(s) 1201
SfaNI GCATC 4 cut(s) 503, 883, 1061, 1850
SfcI CTRYAG 3 cut(s) 294, 1224, 1412
Sfr274I CTCGAG 1 cut(s) 365
SinI GGWCC 3 cut(s) 7, 1216, 1470
SlaI CTCGAG 1 cut(s) 365
SmiMI CAYNNNNRTG 1 cut(s) 1359
SmlI CTYRAG 3 cut(s) 104, 335, 365
SmoI CTYRAG 3 cut(s) 104, 335, 365
SpeI ACTAGT 1 cut(s) 562
SphI GCATGC 1 cut(s) 1052
SsiI CCGC 2 cut(s) 1535, 1692
SspI AATATT 1 cut(s) 1732
SspMI CTAG 6 cut(s) 482, 563, 1040, 1163, 1484, 1583
StyD4I CCNGG 1 cut(s) 1199
StyI CCWWGG 1 cut(s) 1563
TaaI ACNGT 7 cut(s) 275, 357, 397, 619, 1002, 1021, 1649
TaiI ACGT 1 cut(s) 1552
TaqI TCGA 6 cut(s) 366, 379, 453, 1240, 1286, 1770
TfiI GAWTC 7 cut(s) 141, 224, 230, 876, 1349, 1511, 1609
Tru1I TTAA 4 cut(s) 587, 738, 762, 2004
Tru9I TTAA 4 cut(s) 587, 738, 762, 2004
TscAI CASTG 3 cut(s) 360, 636, 2002
TseFI GTSAC 3 cut(s) 631, 1718, 1928
TseI GCWGC 8 cut(s) 122, 244, 469, 491, 595, 1139, 1180, 1961
Tsp45I GTSAC 3 cut(s) 631, 1718, 1928
TspDTI ATGAA 6 cut(s) 74, 1161, 1377, 1623, 1788, 1803
TspGWI ACGGA 3 cut(s) 226, 1504, 1544
TspRI CASTG 3 cut(s) 360, 636, 2002
Van91I CCANNNNNTGG 1 cut(s) 1072
VpaK11BI GGWCC 3 cut(s) 7, 1216, 1470
XapI RAATTY 4 cut(s) 410, 572, 799, 1760
XbaI TCTAGA 2 cut(s) 1039, 1483
XceI RCATGY 4 cut(s) 353, 676, 748, 1052
XhoI CTCGAG 1 cut(s) 365
XmiI GTMKAC 1 cut(s) 1286
XmnI GAANNNNTTC 2 cut(s) 880, 1498
XspI CTAG 6 cut(s) 482, 563, 1040, 1163, 1484, 1583
Zsp2I ATGCAT 1 cut(s) 1054
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.