MD04G1002100.v1.1

protein heterodimerization activity

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
266943 .. 271157
4215 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1002100.v1.1.491

Sequence Viewer

Length: 132 bp
ATGGCTTCAATAAAATCAGCACCCACAACTAGAGAAGTCAAGAAGCCTGACTGCTACCGCCCTGGAATCGTCGCTCTTCGGGGACAAAGGTGTGAGGCAGCGAAGTCAAGTGGGATTAGGAATTTAGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

44

Amino Acids

4.62

Weight (kDa)

10.19

Isoelectric Point (pI)

15.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0024411)

Species Orthologous Gene IDs
malus_domestica MD04G1002100.v1.1 MD12G1176300.v1.1
pyrus_communis pycom08g10830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 58
AcsI RAATTY 1 cut(s) 121
AgsI TTSAA 1 cut(s) 9
AjnI CCWGG 1 cut(s) 61
ApeKI GCWGC 1 cut(s) 98
ApoI RAATTY 1 cut(s) 121
BbvI GCAGC 1 cut(s) 110
BciT130I CCWGG 1 cut(s) 63
BfaI CTAG 1 cut(s) 30
BisI GCNGC 1 cut(s) 99
BlsI GCNGC 1 cut(s) 100
Bme1390I CCNGG 1 cut(s) 63
BmrFI CCNGG 1 cut(s) 63
BsaJI CCNNGG 1 cut(s) 61
BseBI CCWGG 1 cut(s) 63
BseDI CCNNGG 1 cut(s) 61
BseXI GCAGC 1 cut(s) 110
BslFI GGGAC 1 cut(s) 96
BsmFI GGGAC 1 cut(s) 96
BspACI CCGC 1 cut(s) 58
BspQI GCTCTTC 1 cut(s) 81
BssECI CCNNGG 1 cut(s) 61
Bst2UI CCWGG 1 cut(s) 63
Bst6I CTCTTC 1 cut(s) 81
BstNI CCWGG 1 cut(s) 63
BstSCI CCNGG 1 cut(s) 61
BstV1I GCAGC 1 cut(s) 110
CviJI RGCY 2 cut(s) 5, 46
CviKI_1 RGCY 2 cut(s) 5, 46
Eam1104I CTCTTC 1 cut(s) 81
EarI CTCTTC 1 cut(s) 81
EcoRII CCWGG 1 cut(s) 61
FaqI GGGAC 1 cut(s) 96
Fnu4HI GCNGC 1 cut(s) 99
Fsp4HI GCNGC 1 cut(s) 99
FspBI CTAG 1 cut(s) 30
GluI GCNGC 1 cut(s) 99
HinfI GANTC 1 cut(s) 66
Hpy188III TCNNGA 1 cut(s) 40
Hpy99I CGWCG 1 cut(s) 74
LguI GCTCTTC 1 cut(s) 81
LpnPI CCDG 3 cut(s) 48, 60, 75
Lsp1109I GCAGC 1 cut(s) 110
MaeI CTAG 1 cut(s) 30
MboII GAAGA 1 cut(s) 68
MluCI AATT 1 cut(s) 121
MnlI CCTC 1 cut(s) 88
MspR9I CCNGG 1 cut(s) 63
MvaI CCWGG 1 cut(s) 63
PciSI GCTCTTC 1 cut(s) 81
PfeI GAWTC 1 cut(s) 66
PkrI GCNGC 1 cut(s) 100
Psp6I CCWGG 1 cut(s) 61
PspGI CCWGG 1 cut(s) 61
SapI GCTCTTC 1 cut(s) 81
SatI GCNGC 1 cut(s) 99
ScrFI CCNGG 1 cut(s) 63
SetI ASST 1 cut(s) 92
SgeI CNNG 7 cut(s) 42, 52, 59, 74, 75, 92, 120
Sse9I AATT 1 cut(s) 121
SsiI CCGC 1 cut(s) 58
SspMI CTAG 1 cut(s) 30
StyD4I CCNGG 1 cut(s) 61
TasI AATT 1 cut(s) 121
TfiI GAWTC 1 cut(s) 66
TseI GCWGC 1 cut(s) 98
XapI RAATTY 1 cut(s) 121
XspI CTAG 1 cut(s) 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.