pycom08g10830

histone H3

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
9056235 .. 9057678
1444 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g10830.3

Sequence Viewer

Length: 270 bp
ATGTCACCACCCACATCGTCACCAAAGTCATCAAGTACAGCCAGAAGCATGTCGAGCGTCGAGACGGCGATAGCACCGACGTCGGCAAGAGCGGCGATTAGACTATCAAGAAGTTTGTCGGACTTCATTAACGAGATCAAAGATGATCAGAATGTTCTCTTTGATCTGGTCTTGGCTTCAATAAAATCAACACCCACAACTGGAGGAGTCAAGAAGCCTGACTGCTACCGCCCTGGAATCATCGCTCTTCGTTTGAACGAATCAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

90

Amino Acids

9.41

Weight (kDa)

9.43

Isoelectric Point (pI)

57.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024411)

Species Orthologous Gene IDs
malus_domestica MD04G1002100.v1.1 MD12G1176300.v1.1
pyrus_communis pycom08g10830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 83
AccBSI CCGCTC 1 cut(s) 92
AciI CCGC 2 cut(s) 92, 229
AcyI GRCGYC 1 cut(s) 80
AfaI GTAC 1 cut(s) 37
AfiI CCNNNNNNNGG 1 cut(s) 200
AgsI TTSAA 2 cut(s) 180, 256
AjnI CCWGG 1 cut(s) 232
Alw26I GTCTC 1 cut(s) 56
AsuHPI GGTGA 1 cut(s) 12
BceAI ACGGC 1 cut(s) 81
BcgI CGANNNNNNTGC 2 cut(s) 63, 97
BciT130I CCWGG 1 cut(s) 234
BclI TGATCA 1 cut(s) 145
BcoDI GTCTC 1 cut(s) 56
BisI GCNGC 1 cut(s) 93
BlsI GCNGC 1 cut(s) 94
Bme1390I CCNGG 1 cut(s) 234
BmrFI CCNGG 1 cut(s) 234
BpmI CTGGAG 1 cut(s) 222
BsaHI GRCGYC 1 cut(s) 80
BsaJI CCNNGG 1 cut(s) 232
Bsc4I CCNNNNNNNGG 1 cut(s) 200
Bse1I ACTGG 1 cut(s) 205
BseBI CCWGG 1 cut(s) 234
BseDI CCNNGG 1 cut(s) 232
BseLI CCNNNNNNNGG 1 cut(s) 200
BseNI ACTGG 1 cut(s) 205
BseRI GAGGAG 1 cut(s) 219
BslI CCNNNNNNNGG 1 cut(s) 200
BsmAI GTCTC 1 cut(s) 56
BsmBI CGTCTC 1 cut(s) 56
Bsp143I GATC 3 cut(s) 135, 145, 163
BspACI CCGC 2 cut(s) 92, 229
BspQI GCTCTTC 1 cut(s) 252
BsrBI CCGCTC 1 cut(s) 92
BsrI ACTGG 1 cut(s) 205
BssECI CCNNGG 1 cut(s) 232
BssMI GATC 3 cut(s) 135, 145, 163
BssNI GRCGYC 1 cut(s) 80
Bst2UI CCWGG 1 cut(s) 234
Bst6I CTCTTC 1 cut(s) 252
BstACI GRCGYC 1 cut(s) 80
BstKTI GATC 3 cut(s) 138, 148, 166
BstMAI GTCTC 1 cut(s) 56
BstMBI GATC 3 cut(s) 135, 145, 163
BstMWI GCNNNNNNNGC 2 cut(s) 54, 92
BstNI CCWGG 1 cut(s) 234
BstNSI RCATGY 1 cut(s) 52
BstSCI CCNGG 1 cut(s) 232
BtgZI GCGATG 1 cut(s) 226
CseI GACGC 1 cut(s) 46
Csp6I GTAC 1 cut(s) 36
CviAII CATG 1 cut(s) 49
CviJI RGCY 3 cut(s) 41, 176, 217
CviKI_1 RGCY 3 cut(s) 41, 176, 217
CviQI GTAC 1 cut(s) 36
DpnI GATC 3 cut(s) 137, 147, 165
DpnII GATC 3 cut(s) 135, 145, 163
Eam1104I CTCTTC 1 cut(s) 252
EarI CTCTTC 1 cut(s) 252
EcoRII CCWGG 1 cut(s) 232
Esp3I CGTCTC 1 cut(s) 56
FaeI CATG 1 cut(s) 52
FaiI YATR 1 cut(s) 50
FatI CATG 1 cut(s) 48
FbaI TGATCA 1 cut(s) 145
Fnu4HI GCNGC 1 cut(s) 93
Fsp4HI GCNGC 1 cut(s) 93
GluI GCNGC 1 cut(s) 93
GsuI CTGGAG 1 cut(s) 222
HgaI GACGC 1 cut(s) 46
Hin1I GRCGYC 1 cut(s) 80
Hin1II CATG 1 cut(s) 52
HinfI GANTC 3 cut(s) 207, 237, 260
HphI GGTGA 1 cut(s) 12
Hpy188I TCNGA 2 cut(s) 121, 150
Hpy188III TCNNGA 3 cut(s) 61, 108, 211
Hpy99I CGWCG 3 cut(s) 62, 82, 85
HpyCH4IV ACGT 1 cut(s) 80
HpyF10VI GCNNNNNNNGC 2 cut(s) 54, 92
HpySE526I ACGT 1 cut(s) 80
Hsp92I GRCGYC 1 cut(s) 80
Hsp92II CATG 1 cut(s) 52
Ksp22I TGATCA 1 cut(s) 145
Kzo9I GATC 3 cut(s) 135, 145, 163
LguI GCTCTTC 1 cut(s) 252
LpnPI CCDG 7 cut(s) 55, 152, 186, 219, 231, 246, 249
MaeII ACGT 1 cut(s) 80
MaeIII GTNAC 2 cut(s) 3, 18
MalI GATC 3 cut(s) 137, 147, 165
MbiI CCGCTC 1 cut(s) 92
MboI GATC 3 cut(s) 135, 145, 163
MboII GAAGA 1 cut(s) 239
MlyI GAGTC 1 cut(s) 216
MmeI TCCRAC 1 cut(s) 99
MnlI CCTC 1 cut(s) 197
MseI TTAA 1 cut(s) 129
MspR9I CCNGG 1 cut(s) 234
MvaI CCWGG 1 cut(s) 234
MwoI GCNNNNNNNGC 2 cut(s) 54, 92
NdeII GATC 3 cut(s) 135, 145, 163
NlaIII CATG 1 cut(s) 52
NmuCI GTSAC 2 cut(s) 3, 18
NspI RCATGY 1 cut(s) 52
PciSI GCTCTTC 1 cut(s) 252
PfeI GAWTC 2 cut(s) 237, 260
PkrI GCNGC 1 cut(s) 94
PleI GAGTC 1 cut(s) 215
PpsI GAGTC 1 cut(s) 215
Psp6I CCWGG 1 cut(s) 232
PspGI CCWGG 1 cut(s) 232
RsaI GTAC 1 cut(s) 37
RsaNI GTAC 1 cut(s) 36
SapI GCTCTTC 1 cut(s) 252
SaqAI TTAA 1 cut(s) 129
SatI GCNGC 1 cut(s) 93
Sau3AI GATC 3 cut(s) 135, 145, 163
SchI GAGTC 1 cut(s) 216
ScrFI CCNGG 1 cut(s) 234
SetI ASST 2 cut(s) 83, 268
SsiI CCGC 2 cut(s) 92, 229
StyD4I CCNGG 1 cut(s) 232
TaiI ACGT 1 cut(s) 83
TaqI TCGA 2 cut(s) 53, 60
TatI WGTACW 1 cut(s) 35
TauI GCSGC 1 cut(s) 95
TfiI GAWTC 2 cut(s) 237, 260
Tru1I TTAA 1 cut(s) 129
Tru9I TTAA 1 cut(s) 129
TseFI GTSAC 2 cut(s) 3, 18
Tsp45I GTSAC 2 cut(s) 3, 18
TspDTI ATGAA 1 cut(s) 115
XceI RCATGY 1 cut(s) 52
ZraI GACGTC 1 cut(s) 81
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.