Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0015009

Physical Location & Seq

Genomic Coordinates Reverse (-)

23696193 .. 23697378

Gene Structure 1186 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1148700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 918 bp

ATGACATTTTTTTGGAATATTGAAGGTTACATGGTCCAAAGGACTAGATGTGAGCCGCTACCAAGAAACAAGCTTCTCAGTCCAGTCATATTTCATGAGGGCAGATTAGTCCAGAGACCTACCCCAATAGTTGCTCTATTGACTTTCCTATGGATGCCGATTGGTATCCTCCTCGCAGTCCTCAGAGTCTACACCAACATCCCATTGCCTGAGAAAATTGCAAGATATAACTACAAACTCCTAGGGATTAACCTTATAGTTAAGGGCACCCCTCCCCCTCCGCCCAAGAAAGGTCATAGTGGGGTCCTATTCATTTGCAACCACCGTACGGTCCTAGACCCCGTTGTCCTGGCAGTTGCCCTAGGAAGAAAAATCAGTTGTGTCACATATAGTATTAGCAAATTTACAGAACTAATTTCTCCGATTAAGGCCGTGGCTTTGTCAAGGGAGAGAGAGAAGGACGCGGCGAACATCAAGCGTTTGCTCGAGGAAGGCGACTTGGTGATCTGCCCAGAAGGCACTACGTGCAGGGAGCCGTTTCTGTTGAGGTTTAGTGCGCTATTTGCTGAGCTCACTGATAGAATTGTGCCTGTTGCAATCAACACAAAACAAAGTGTATTTCATGGGACAACGGTTAGAGGACACAAATGGTTGGACCCTTACTTCGCGTTCATGAATCCGATGCCGACGTACGAGATTACGTTCTTGAACCAGCTCCCGTCGGAGCTCACTTGCAAAGGTGGGAAATCTGCCTTTGAAGTTGCAAATTATATCCAGAGGGTGTTGGCTGGAACTTTAGGGTTTGAGTGCACAAATTTAACTAGGAAAGACAAGTATAGCATACTTGCAGGGACAGATGGCAGAGTTCCATCATCCAACAAGGAAAAAGAAAGGGAAAAGCAAAAGCAAAAAGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009059 GO:0009791 GO:0009908 GO:0009987 GO:0010143 GO:0016020 GO:0016311 GO:0016740 GO:0016746 GO:0016747 GO:0016787 GO:0016788 GO:0016791 GO:0022414 GO:0032501 GO:0032502 GO:0042578 GO:0043170 GO:0044237 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090447 GO:0090567 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

Acyltransferase HAD

Protein Analysis

306

Amino Acids

34.43

Weight (kDa)

9.63

Isoelectric Point (pI)

46.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acyltransferase	PF01553	99 - 200	1.1e-09	Acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015009)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38110
fragaria_vesca	FvH4_6g11850
malus_domestica	MD04G1148700.v1.1
prunus_persica	Prupe.6G272900_v2.0.a1
pyrus_communis	pycom04g13420 pycom12g15400
rosa_chinensis	RchiOBHm_Chr3g0463591
rosa_laevigata	RLG00000024770
rosa_multiflora	Rmu_sc0003267.1_g000019
rosa_roxburghii	Rroxscaffold_6G00416410
rosa_rugosa	Rorug03G0066100
rosa_samantha	Rh3AG123200 Rh3BG128100 Rh3CG129800 Rh3DG128700
rosa_wichuraiana	Rw3G010420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	344
AccB1I	GGYRCC	1 cut(s)	266
AccI	GTMKAC	1 cut(s)	189
AccII	CGCG	2 cut(s)	464, 668
AciI	CCGC	3 cut(s)	56, 281, 464
AcsI	RAATTY	2 cut(s)	401, 814
AdeI	CACNNNGTG	1 cut(s)	525
AfaI	GTAC	2 cut(s)	328, 692
AfiI	CCNNNNNNNGG	2 cut(s)	290, 328
AgsI	TTSAA	3 cut(s)	23, 709, 758
AjnI	CCWGG	1 cut(s)	348
AluBI	AGCT	4 cut(s)	73, 571, 715, 727
AluI	AGCT	4 cut(s)	73, 571, 715, 727
Alw21I	GWGCWC	3 cut(s)	573, 729, 812
Alw26I	GTCTC	1 cut(s)	109
Alw44I	GTGCAC	1 cut(s)	808
Ama87I	CYCGRG	1 cut(s)	485
AoxI	GGCC	1 cut(s)	429
ApaLI	GTGCAC	1 cut(s)	808
ApoI	RAATTY	2 cut(s)	401, 814
ArsI	GACNNNNNNTTYG	2 cut(s)	647, 679
AspA2I	CCTAGG	2 cut(s)	241, 361
AspLEI	GCGC	1 cut(s)	559
AspS9I	GGNCC	4 cut(s)	34, 304, 331, 655
AsuHPI	GGTGA	1 cut(s)	514
AvaI	CYCGRG	1 cut(s)	485
AvaII	GGWCC	4 cut(s)	34, 304, 331, 655
AvrII	CCTAGG	2 cut(s)	241, 361
BaeGI	GKGCMC	2 cut(s)	269, 812
BanI	GGYRCC	1 cut(s)	266
BanII	GRGCYC	2 cut(s)	573, 729
Bbv12I	GWGCWC	3 cut(s)	573, 729, 812
BccI	CCATC	2 cut(s)	851, 877
BceAI	ACGGC	2 cut(s)	416, 520
BciT130I	CCWGG	1 cut(s)	350
BciVI	GTATCC	1 cut(s)	176
BcoDI	GTCTC	1 cut(s)	109
BfaI	CTAG	5 cut(s)	45, 242, 335, 362, 822
BfuI	GTATCC	1 cut(s)	176
BglI	GCCNNNNNGGC	1 cut(s)	516
BisI	GCNGC	2 cut(s)	56, 465
BlnI	CCTAGG	2 cut(s)	241, 361
BlpI	GCTNAGC	1 cut(s)	567
BlsI	GCNGC	2 cut(s)	57, 466
Bme1390I	CCNGG	1 cut(s)	350
Bme18I	GGWCC	4 cut(s)	34, 304, 331, 655
BmeT110I	CYCGRG	1 cut(s)	485
BmgT120I	GGNCC	4 cut(s)	34, 304, 331, 655
BmiI	GGNNCC	4 cut(s)	268, 305, 534, 657
BmrFI	CCNGG	1 cut(s)	350
BmsI	GCATC	2 cut(s)	144, 672
Bpu1102I	GCTNAGC	1 cut(s)	567
BsaAI	YACGTR	1 cut(s)	525
BsaBI	GATNNNNATC	1 cut(s)	164
BsaI	GGTCTC	1 cut(s)	109
BsaJI	CCNNGG	3 cut(s)	241, 361, 432
Bsc4I	CCNNNNNNNGG	2 cut(s)	290, 328
Bse1I	ACTGG	1 cut(s)	83
Bse3DI	GCAATG	1 cut(s)	203
Bse8I	GATNNNNATC	1 cut(s)	164
BseBI	CCWGG	1 cut(s)	350
BseDI	CCNNGG	3 cut(s)	241, 361, 432
BseGI	GGATG	3 cut(s)	159, 198, 872
BseJI	GATNNNNATC	1 cut(s)	164
BseLI	CCNNNNNNNGG	2 cut(s)	290, 328
BseMI	GCAATG	1 cut(s)	203
BseMII	CTCAG	4 cut(s)	91, 196, 201, 558
BseNI	ACTGG	1 cut(s)	83
BseRI	GAGGAG	1 cut(s)	161
BseSI	GKGCMC	2 cut(s)	269, 812
BsgI	GTGCAG	1 cut(s)	547
Bsh1236I	CGCG	2 cut(s)	464, 668
BshFI	GGCC	1 cut(s)	431
BshNI	GGYRCC	1 cut(s)	266
BsiHKAI	GWGCWC	3 cut(s)	573, 729, 812
BsiHKCI	CYCGRG	1 cut(s)	485
BsiWI	CGTACG	2 cut(s)	326, 690
BslFI	GGGAC	2 cut(s)	640, 865
BslI	CCNNNNNNNGG	2 cut(s)	290, 328
BsmAI	GTCTC	1 cut(s)	109
BsmFI	GGGAC	2 cut(s)	640, 865
BsnI	GGCC	1 cut(s)	431
Bso31I	GGTCTC	1 cut(s)	109
BsoBI	CYCGRG	1 cut(s)	485
Bsp1286I	GDGCHC	4 cut(s)	269, 573, 729, 812
Bsp143I	GATC	1 cut(s)	504
Bsp1720I	GCTNAGC	1 cut(s)	567
BspACI	CCGC	3 cut(s)	56, 281, 464
BspANI	GGCC	1 cut(s)	431
BspCNI	CTCAG	4 cut(s)	90, 195, 202, 559
BspFNI	CGCG	2 cut(s)	464, 668
BspHI	TCATGA	2 cut(s)	94, 672
BspLI	GGNNCC	4 cut(s)	268, 305, 534, 657
BspT107I	GGYRCC	1 cut(s)	266
BspTNI	GGTCTC	1 cut(s)	109
BsrDI	GCAATG	1 cut(s)	203
BsrI	ACTGG	1 cut(s)	83
BssECI	CCNNGG	3 cut(s)	241, 361, 432
BssMI	GATC	1 cut(s)	504
BssT1I	CCWWGG	2 cut(s)	241, 361
Bst2UI	CCWGG	1 cut(s)	350
Bst4CI	ACNGT	3 cut(s)	326, 331, 634
BstAPI	GCANNNNNTGC	1 cut(s)	525
BstBAI	YACGTR	1 cut(s)	525
BstDEI	CTNAG	4 cut(s)	77, 182, 210, 567
BstDSI	CCRYGG	1 cut(s)	432
BstF5I	GGATG	3 cut(s)	159, 198, 872
BstFNI	CGCG	2 cut(s)	464, 668
BstHHI	GCGC	1 cut(s)	559
BstKTI	GATC	1 cut(s)	507
BstMAI	GTCTC	1 cut(s)	109
BstMBI	GATC	1 cut(s)	504
BstMWI	GCNNNNNNNGC	3 cut(s)	516, 525, 563
BstNI	CCWGG	1 cut(s)	350
BstSCI	CCNGG	1 cut(s)	348
BstSLI	GKGCMC	2 cut(s)	269, 812
BstUI	CGCG	2 cut(s)	464, 668
BsuI	GTATCC	1 cut(s)	176
BsuRI	GGCC	1 cut(s)	431
BtgI	CCRYGG	1 cut(s)	432
BtsCI	GGATG	3 cut(s)	159, 198, 872
BtsIMutI	CAGTG	1 cut(s)	573
CciI	TCATGA	2 cut(s)	94, 672
CfoI	GCGC	1 cut(s)	559
Cfr13I	GGNCC	4 cut(s)	34, 304, 331, 655
CseI	GACGC	1 cut(s)	470
Csp6I	GTAC	2 cut(s)	327, 691
CviAII	CATG	4 cut(s)	31, 95, 623, 673
CviJI	RGCY	9 cut(s)	55, 73, 431, 437, 535, 571, 715, 727, 788
CviKI_1	RGCY	9 cut(s)	55, 73, 431, 437, 535, 571, 715, 727, 788
CviQI	GTAC	2 cut(s)	327, 691
DdeI	CTNAG	4 cut(s)	77, 182, 210, 567
DpnI	GATC	1 cut(s)	506
DpnII	GATC	1 cut(s)	504
DraIII	CACNNNGTG	1 cut(s)	525
DrdI	GACNNNNNNGTC	1 cut(s)	344
DseDI	GACNNNNNNGTC	1 cut(s)	344
EciI	GGCGGA	1 cut(s)	270
Ecl136II	GAGCTC	2 cut(s)	571, 727
Eco130I	CCWWGG	2 cut(s)	241, 361
Eco24I	GRGCYC	2 cut(s)	573, 729
Eco31I	GGTCTC	1 cut(s)	109
Eco47I	GGWCC	4 cut(s)	34, 304, 331, 655
Eco53kI	GAGCTC	2 cut(s)	571, 727
Eco88I	CYCGRG	1 cut(s)	485
EcoICRI	GAGCTC	2 cut(s)	571, 727
EcoO109I	RGGNCCY	1 cut(s)	304
EcoRII	CCWGG	1 cut(s)	348
EcoT14I	CCWWGG	2 cut(s)	241, 361
EcoT38I	GRGCYC	2 cut(s)	573, 729
ErhI	CCWWGG	2 cut(s)	241, 361
FaeI	CATG	4 cut(s)	34, 98, 626, 676
FaqI	GGGAC	2 cut(s)	640, 865
FatI	CATG	4 cut(s)	30, 94, 622, 672
FblI	GTMKAC	1 cut(s)	189
Fnu4HI	GCNGC	2 cut(s)	56, 465
FokI	GGATG	3 cut(s)	166, 185, 859
FriOI	GRGCYC	2 cut(s)	573, 729
Fsp4HI	GCNGC	2 cut(s)	56, 465
FspBI	CTAG	5 cut(s)	45, 242, 335, 362, 822
GlaI	GCGC	1 cut(s)	558
GluI	GCNGC	2 cut(s)	56, 465
HaeIII	GGCC	1 cut(s)	431
HgaI	GACGC	1 cut(s)	470
HhaI	GCGC	1 cut(s)	559
Hin1II	CATG	4 cut(s)	34, 98, 626, 676
Hin6I	GCGC	1 cut(s)	557
HinP1I	GCGC	1 cut(s)	557
HindIII	AAGCTT	1 cut(s)	71
HinfI	GANTC	2 cut(s)	186, 676
HphI	GGTGA	1 cut(s)	514
Hpy166II	GTNNAC	2 cut(s)	190, 810
Hpy188I	TCNGA	4 cut(s)	185, 423, 681, 724
Hpy188III	TCNNGA	5 cut(s)	95, 112, 673, 706, 775
Hpy8I	GTNNAC	2 cut(s)	190, 810
Hpy99I	CGWCG	2 cut(s)	691, 724
HpyAV	CCTTC	4 cut(s)	17, 451, 485, 509
HpyCH4III	ACNGT	3 cut(s)	326, 331, 634
HpyCH4IV	ACGT	3 cut(s)	524, 689, 701
HpyCH4V	TGCA	8 cut(s)	221, 318, 528, 596, 735, 764, 810, 848
HpyF10VI	GCNNNNNNNGC	3 cut(s)	516, 525, 563
HpyF3I	CTNAG	4 cut(s)	77, 182, 210, 567
HpySE526I	ACGT	3 cut(s)	524, 689, 701
Hsp92II	CATG	4 cut(s)	34, 98, 626, 676
HspAI	GCGC	1 cut(s)	557
Kzo9I	GATC	1 cut(s)	504
LmnI	GCTCC	3 cut(s)	532, 720, 724
LweI	GCATC	2 cut(s)	144, 672
MaeI	CTAG	5 cut(s)	45, 242, 335, 362, 822
MaeII	ACGT	3 cut(s)	524, 689, 701
MaeIII	GTNAC	2 cut(s)	26, 382
MalI	GATC	1 cut(s)	506
MboI	GATC	1 cut(s)	504
MboII	GAAGA	1 cut(s)	378
MhlI	GDGCHC	4 cut(s)	269, 573, 729, 812
MluCI	AATT	6 cut(s)	216, 401, 414, 582, 766, 814
MlyI	GAGTC	1 cut(s)	195
MmeI	TCCRAC	3 cut(s)	633, 702, 900
MseI	TTAA	5 cut(s)	249, 261, 426, 818, 916
MspR9I	CCNGG	1 cut(s)	350
MvaI	CCWGG	1 cut(s)	350
MvnI	CGCG	2 cut(s)	464, 668
MwoI	GCNNNNNNNGC	3 cut(s)	516, 525, 563
NdeII	GATC	1 cut(s)	504
NlaIII	CATG	4 cut(s)	34, 98, 626, 676
NlaIV	GGNNCC	4 cut(s)	268, 305, 534, 657
NmuCI	GTSAC	1 cut(s)	382
PaeR7I	CTCGAG	1 cut(s)	485
PagI	TCATGA	2 cut(s)	94, 672
PcsI	WCGNNNNNNNCGW	1 cut(s)	492
PfeI	GAWTC	1 cut(s)	676
Pfl23II	CGTACG	2 cut(s)	326, 690
PkrI	GCNGC	2 cut(s)	57, 466
PleI	GAGTC	1 cut(s)	194
PpsI	GAGTC	1 cut(s)	194
Ppu21I	YACGTR	1 cut(s)	525
PpuMI	RGGWCCY	1 cut(s)	304
Psp124BI	GAGCTC	2 cut(s)	573, 729
Psp5II	RGGWCCY	1 cut(s)	304
Psp6I	CCWGG	1 cut(s)	348
PspGI	CCWGG	1 cut(s)	348
PspLI	CGTACG	2 cut(s)	326, 690
PspN4I	GGNNCC	4 cut(s)	268, 305, 534, 657
PspPI	GGNCC	4 cut(s)	34, 304, 331, 655
PspPPI	RGGWCCY	1 cut(s)	304
PspXI	VCTCGAGB	1 cut(s)	485
RsaI	GTAC	2 cut(s)	328, 692
RsaNI	GTAC	2 cut(s)	327, 691
SacI	GAGCTC	2 cut(s)	573, 729
SaqAI	TTAA	5 cut(s)	249, 261, 426, 818, 916
SatI	GCNGC	2 cut(s)	56, 465
Sau3AI	GATC	1 cut(s)	504
Sau96I	GGNCC	4 cut(s)	34, 304, 331, 655
SchI	GAGTC	1 cut(s)	195
ScrFI	CCNGG	1 cut(s)	350
SduI	GDGCHC	4 cut(s)	269, 573, 729, 812
SfaNI	GCATC	2 cut(s)	144, 672
Sfr274I	CTCGAG	1 cut(s)	485
SinI	GGWCC	4 cut(s)	34, 304, 331, 655
SlaI	CTCGAG	1 cut(s)	485
SmlI	CTYRAG	1 cut(s)	485
SmoI	CTYRAG	1 cut(s)	485
Sse9I	AATT	6 cut(s)	216, 401, 414, 582, 766, 814
SsiI	CCGC	3 cut(s)	56, 281, 464
SspI	AATATT	1 cut(s)	19
SspMI	CTAG	5 cut(s)	45, 242, 335, 362, 822
SstI	GAGCTC	2 cut(s)	573, 729
StyD4I	CCNGG	1 cut(s)	348
StyI	CCWWGG	2 cut(s)	241, 361
TaaI	ACNGT	3 cut(s)	326, 331, 634
TaiI	ACGT	3 cut(s)	527, 692, 704
TaqI	TCGA	1 cut(s)	486
TasI	AATT	6 cut(s)	216, 401, 414, 582, 766, 814
TauI	GCSGC	2 cut(s)	58, 467
TfiI	GAWTC	1 cut(s)	676
Tru1I	TTAA	5 cut(s)	249, 261, 426, 818, 916
Tru9I	TTAA	5 cut(s)	249, 261, 426, 818, 916
TscAI	CASTG	1 cut(s)	580
TseFI	GTSAC	1 cut(s)	382
Tsp45I	GTSAC	1 cut(s)	382
TspDTI	ATGAA	5 cut(s)	83, 301, 611, 661, 689
TspRI	CASTG	1 cut(s)	580
VneI	GTGCAC	1 cut(s)	808
VpaK11BI	GGWCC	4 cut(s)	34, 304, 331, 655
XapI	RAATTY	2 cut(s)	401, 814
XhoI	CTCGAG	1 cut(s)	485
XmaJI	CCTAGG	2 cut(s)	241, 361
XmiI	GTMKAC	1 cut(s)	189
XspI	CTAG	5 cut(s)	45, 242, 335, 362, 822

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.