Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0015009

Physical Location & Seq

Genomic Coordinates Forward (+)

4891282 .. 4896068

Gene Structure 4787 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0066100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2472 bp

ATGCCACTGTTTCACACCTACAAAGTTGCTAATGCGCAGAAAATGTTATTCAAAGCTCTGCTTCTCTTCCTCCTCTTCCGATTTTGCGAATCCAGGGACACCATAACATGGAACCAAGAACAACTGAAGGATGATGGTGGAGTTTTAGTGTCCAAACAGAGCAAGTTCGAATTGGGTTTCTTCAGCCCCGGAAATTCTAGCTACCGGTATGTCGGAATTTGGTATTCTCAGACTGAAGTATCTAATAAAACAGTGGTGTGGGTTGCAAACAGGAACAATCCCATCAATGATACCTCTGGTGTGCTCACAATAAACAGGTATGGAGAACTAGTCCTTTATGCTTATAACATGGAGAGCACTCCTATTTGGTCTACTTATGTGTCGCGGTCGGTTCAAAATGTTCACACAACCACTTTATCTGCACAGCTTTTAGATACAGGAAATCTAGTTGTGTTCCAGGATGATAATAATGAAATCTCTATATGGCAAAGTTTTGATCATCCTACAGATACTTTAATTCGAGGTATGAAAGTTGGGGTGAACTGGAAAACTGGGCAAGAATGGGTTTTAACATCTTGGAAGTCACAAGATGACCCTGGAACTGGGGACTATACCCTTAGGCTCTATCCAAATCAGATTGCATCCCCCCAATTTTTTATGTACAAGGGGTCGAGTAAGTATTGGCGAAGTGATACAGTGCCAATTGATTTGGTCACTAATCAAGAGGAGACTTATTATCTCATGAATGACACCAATACAATTACAAGAGCAACACTGACTGATTCTGCGGTAGAACACCTTACATGGGATGATGGTGGCCTTCAATGGGAGGAAGACTTCTCTTTACCGAAGTCCCGGTGTGACTGGTATGGACAGTGCGGTGCCAACAGCAAATGTAGCCCTGACAATGTTAATATGTTTTGGTGTGATTGTTTACCAGGGTATGTGCCTAATTCTATTAGTGATTGGAATCATAAAAATGGGACAGGTGGATGTGTGAGTAATCGACTTGGTTTGTTGAAGTGTGGAGATGGAGACGGGTTTGTGAAGGTGGCAAGAGTTAAATATCCTGACACATCGATAGGAGCATTGTTAAAATCAGGTATGAGTGCCAAAGAGTGTGAGCAGGAGTGCCTAAGAAATTGTTCTTGCACCGCATATTTGAGCACTGAATATGAAGGGATTGTTGATTGCTTGACATGGTATGATGACTTGATGGACATTTTAGTGTACACAGAGCTTGGACAAGATCTCTACGTTCGTGTGAATGCAACCGTGTTAGCTGCAAATGCCAGAAGATCAGAACGTTTCTTGGAAAGGAGGGGTATGCTGGCTATTCCAATACTGTCTGCTGTGCTAGCATTGGTACTAATCATTATGCTTGCATGTTGGTGGGGTAAGAAGAACAGGAACACAAAAGGCATAGACTTTGTGGAGGCAGACGAGCTTGTGGAAAACCAGAGAAACCCTGAATTGCAATTTTTCGATCTTGACACAATAATAGCAGCCACAGACCACTTCTCTCGTGTCAATGAACTTGGCCATGGTGGTTTTGGCTCTGTTTATAAGGGTCAGCTACCAAATGAAGAGAAAGTTGCTGTGAAAAGATTGTCCCAAACTTCAGGACAAGGGATCGAAGAATTCAAAAATGAAGTTGCAGTTATAGCAAGACTTCAACACAGGAATCTTGTGAAACTTTTAGGCTGTTGTATAAAGGGAGAAGAAAGGATGTTAGTGCTAGAATACATGCCTAACAAAAGCTTGAACTCCTTTCTTTTCGATAACACAAGACGGTCCTTCTTGGATTGGGAAAAGCGCTTTGAAATTATCAACGGGATTGCTCGTGGGATTTTGTATCTTCACCAAGACTCAAGATTGAGGATCATCCATAGAGATCTGAAAACTAGCAATATTCTTCTAGATACGAAGATGAACCCAAAAATTTCTGATTTTGGCATGGCTAGAATATTCCACGGAGATCAACTGCAAGATAACACGAGCCGAATTGTTGGAACATATGGCTACATGTCACCAGAGTACGCAATATTTGGAAGATTTTCTACGAAATCTGATGTATTTAGTTTTGGGATCATAATGTTGGAGATTGTCAGTGGCCGGAAAAACAATGGTTATGATCTGGAGGATCCTTCCATGAACTTGATAGGACATGTTTGGGAGCTCTGGGGTGAAGGCAGGGCCTTAGATATTGTTGATTCGACACTGAAGTCATATCAGCCTAATGAAGTCATGAGAAGCATACAAGTTGCGCTCTTGTGTGTACAAGAAGATTCAAAGGACCGACCTGCCATGTCAGCCATTGTTTTCATGTTGAGTGGTGAAGCATCTCCTCCATTGCCTAAGCATCCGGCATTTGTTTACAGAAGAGATTTCAACGCTGATGTTGATCCATTACTTCCAAACGGATCTGATTCTGTAAATGACTTGACAATAACTACAATGGAAGCTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009059 GO:0009791 GO:0009908 GO:0009987 GO:0010143 GO:0016020 GO:0016311 GO:0016740 GO:0016746 GO:0016747 GO:0016787 GO:0016788 GO:0016791 GO:0022414 GO:0032501 GO:0032502 GO:0042578 GO:0043170 GO:0044237 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090447 GO:0090567 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

Acyltransferase HAD

Protein Analysis

823

Amino Acids

93.37

Weight (kDa)

5.36

Isoelectric Point (pI)

38.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	84 - 194	6e-35	D-mannose binding lectin
S_locus_glycop	PF00954	231 - 318	5.3e-13	S-locus glycoprotein domain
PAN_2	PF08276	342 - 408	9.2e-18	PAN-like domain
Pkinase	PF00069	508 - 710	4.8e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	510 - 775	2.8e-51	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015009)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38110
fragaria_vesca	FvH4_6g11850
malus_domestica	MD04G1148700.v1.1
prunus_persica	Prupe.6G272900_v2.0.a1
pyrus_communis	pycom04g13420 pycom12g15400
rosa_chinensis	RchiOBHm_Chr3g0463591
rosa_laevigata	RLG00000024770
rosa_multiflora	Rmu_sc0003267.1_g000019
rosa_roxburghii	Rroxscaffold_6G00416410
rosa_rugosa	Rorug03G0066100
rosa_samantha	Rh3AG123200 Rh3BG128100 Rh3CG129800 Rh3DG128700
rosa_wichuraiana	Rw3G010420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	345, 1566
AasI	GACNNNNNNGTC	1 cut(s)	2224
Acc16I	TGCGCA	1 cut(s)	36
Acc36I	ACCTGC	1 cut(s)	2311
AccB1I	GGYRCC	1 cut(s)	881
AccB7I	CCANNNNNTGG	1 cut(s)	108
AccI	GTMKAC	1 cut(s)	371
AccII	CGCG	1 cut(s)	385
AciI	CCGC	4 cut(s)	385, 788, 879, 1155
AclI	AACGTT	1 cut(s)	1306
AclWI	GGATC	7 cut(s)	1640, 1889, 2096, 2138, 2151, 2399, 2431
AcoI	YGGCCR	2 cut(s)	1540, 2113
AcsI	RAATTY	4 cut(s)	193, 216, 1640, 1941
AcuI	CTGAAG	5 cut(s)	146, 166, 255, 1605, 2243
AfaI	GTAC	5 cut(s)	662, 1232, 1368, 2039, 2280
AfeI	AGCGCT	1 cut(s)	1817
AfiI	CCNNNNNNNGG	4 cut(s)	108, 602, 805, 826
AflIII	ACRYGT	2 cut(s)	2025, 2167
AgeI	ACCGGT	1 cut(s)	204
AhlI	ACTAGT	1 cut(s)	328
AjnI	CCWGG	4 cut(s)	92, 456, 595, 937
Alw21I	GWGCWC	4 cut(s)	306, 359, 1169, 2181
Alw26I	GTCTC	2 cut(s)	722, 1029
AlwI	GGATC	7 cut(s)	1640, 1889, 2096, 2138, 2151, 2399, 2431
Aor51HI	AGCGCT	1 cut(s)	1817
AoxI	GGCC	4 cut(s)	817, 1540, 2113, 2196
ApeKI	GCWGC	2 cut(s)	1283, 1505
ApoI	RAATTY	4 cut(s)	193, 216, 1640, 1941
AsiGI	ACCGGT	1 cut(s)	204
Asp700I	GAANNNNTTC	2 cut(s)	1144, 2056
AspLEI	GCGC	3 cut(s)	37, 1818, 2269
AspS9I	GGNCC	3 cut(s)	1794, 2196, 2296
AsuC2I	CCSGG	2 cut(s)	189, 856
AsuHPI	GGTGA	5 cut(s)	550, 1853, 2022, 2198, 2348
AsuII	TTCGAA	1 cut(s)	168
AsuNHI	GCTAGC	1 cut(s)	1357
AvaII	GGWCC	2 cut(s)	1794, 2296
AxyI	CCTNAGG	1 cut(s)	617
BaeI	ACNNNNGTAYC	2 cut(s)	222, 255
BalI	TGGCCA	1 cut(s)	1542
BamHI	GGATCC	1 cut(s)	2143
BanI	GGYRCC	1 cut(s)	881
BanII	GRGCYC	1 cut(s)	2181
BarI	GAAGNNNNNNTAC	2 cut(s)	2044, 2076
BauI	CACGAG	3 cut(s)	1524, 1842, 1996
BbsI	GAAGAC	1 cut(s)	840
Bbv12I	GWGCWC	4 cut(s)	306, 359, 1169, 2181
BbvI	GCAGC	2 cut(s)	1270, 1517
BccI	CCATC	5 cut(s)	128, 290, 806, 1025, 1210
BciT130I	CCWGG	4 cut(s)	94, 458, 597, 939
BclI	TGATCA	1 cut(s)	496
BcnI	CCSGG	2 cut(s)	189, 856
BcoDI	GTCTC	2 cut(s)	722, 1029
BcuI	ACTAGT	1 cut(s)	328
BfaI	CTAG	8 cut(s)	198, 329, 446, 1358, 1739, 1905, 1919, 1962
BfmI	CTRYAG	1 cut(s)	504
BfoI	RGCGCY	1 cut(s)	1819
BfuAI	ACCTGC	1 cut(s)	2311
BglII	AGATCT	2 cut(s)	1249, 1894
BisI	GCNGC	2 cut(s)	1284, 1506
BlsI	GCNGC	2 cut(s)	1285, 1507
Bme1390I	CCNGG	6 cut(s)	94, 189, 458, 597, 856, 939
Bme18I	GGWCC	2 cut(s)	1794, 2296
BmgT120I	GGNCC	3 cut(s)	1794, 2196, 2296
BmiI	GGNNCC	3 cut(s)	113, 883, 2145
BmrFI	CCNGG	6 cut(s)	94, 189, 458, 597, 856, 939
BmrI	ACTGGG	2 cut(s)	561, 612
BmsI	GCATC	3 cut(s)	650, 2351, 2371
BmtI	GCTAGC	1 cut(s)	1361
BmuI	ACTGGG	2 cut(s)	561, 612
BpiI	GAAGAC	1 cut(s)	840
BpmI	CTGGAG	1 cut(s)	2159
Bpu10I	CCTNAGC	1 cut(s)	2358
Bpu14I	TTCGAA	1 cut(s)	168
BpuEI	CTTGAG	1 cut(s)	1855
BpuMI	CCSGG	2 cut(s)	189, 856
Bsa29I	ATCGAT	1 cut(s)	1079
BsaBI	GATNNNNATC	2 cut(s)	969, 2403
BsaJI	CCNNGG	6 cut(s)	93, 187, 595, 938, 1543, 1972
BsaWI	WCCGGW	1 cut(s)	204
BsaXI	ACNNNNNCTCC	4 cut(s)	132, 162, 315, 345
Bsc4I	CCNNNNNNNGG	4 cut(s)	108, 602, 805, 826
Bse118I	RCCGGY	1 cut(s)	204
Bse1I	ACTGG	4 cut(s)	548, 556, 607, 869
Bse21I	CCTNAGG	1 cut(s)	617
Bse3DI	GCAATG	1 cut(s)	2351
Bse8I	GATNNNNATC	2 cut(s)	969, 2403
BseBI	CCWGG	4 cut(s)	94, 458, 597, 939
BseCI	ATCGAT	1 cut(s)	1079
BseDI	CCNNGG	6 cut(s)	93, 187, 595, 938, 1543, 1972
BseGI	GGATG	9 cut(s)	136, 466, 499, 641, 814, 998, 1734, 1884, 2362
BseJI	GATNNNNATC	2 cut(s)	969, 2403
BseLI	CCNNNNNNNGG	4 cut(s)	108, 602, 805, 826
BseMI	GCAATG	1 cut(s)	2351
BseMII	CTCAG	1 cut(s)	242
BseNI	ACTGG	4 cut(s)	548, 556, 607, 869
BseRI	GAGGAG	3 cut(s)	62, 740, 2337
BseXI	GCAGC	2 cut(s)	1270, 1517
BsgI	GTGCAG	1 cut(s)	405
Bsh1236I	CGCG	1 cut(s)	385
Bsh1285I	CGRYCG	1 cut(s)	389
BshFI	GGCC	4 cut(s)	819, 1542, 2115, 2198
BshNI	GGYRCC	1 cut(s)	881
BshTI	ACCGGT	1 cut(s)	204
BshVI	ATCGAT	1 cut(s)	1079
BsiEI	CGRYCG	1 cut(s)	389
BsiHKAI	GWGCWC	4 cut(s)	306, 359, 1169, 2181
BsiSI	CCGG	5 cut(s)	189, 205, 856, 2116, 2366
BslFI	GGGAC	5 cut(s)	110, 620, 838, 997, 1597
BslI	CCNNNNNNNGG	4 cut(s)	108, 602, 805, 826
BsmAI	GTCTC	2 cut(s)	722, 1029
BsmBI	CGTCTC	1 cut(s)	1029
BsmFI	GGGAC	5 cut(s)	110, 620, 838, 997, 1597
BsmI	GAATGC	1 cut(s)	1273
BsnI	GGCC	4 cut(s)	819, 1542, 2115, 2198
Bsp119I	TTCGAA	1 cut(s)	168
Bsp1286I	GDGCHC	4 cut(s)	306, 359, 1169, 2181
Bsp1407I	TGTACA	3 cut(s)	660, 1230, 2278
Bsp19I	CCATGG	1 cut(s)	1543
BspACI	CCGC	4 cut(s)	385, 788, 879, 1155
BspANI	GGCC	4 cut(s)	819, 1542, 2115, 2198
BspCNI	CTCAG	1 cut(s)	241
BspDI	ATCGAT	1 cut(s)	1079
BspFNI	CGCG	1 cut(s)	385
BspHI	TCATGA	2 cut(s)	741, 2247
BspLI	GGNNCC	3 cut(s)	113, 883, 2145
BspMI	ACCTGC	1 cut(s)	2311
BspOI	GCTAGC	1 cut(s)	1361
BspPI	GGATC	7 cut(s)	1640, 1889, 2096, 2138, 2151, 2399, 2431
BspT104I	TTCGAA	1 cut(s)	168
BspT107I	GGYRCC	1 cut(s)	881
BsrDI	GCAATG	1 cut(s)	2351
BsrFI	RCCGGY	1 cut(s)	204
BsrGI	TGTACA	3 cut(s)	660, 1230, 2278
BsrI	ACTGG	4 cut(s)	548, 556, 607, 869
BssAI	RCCGGY	1 cut(s)	204
BssECI	CCNNGG	6 cut(s)	93, 187, 595, 938, 1543, 1972
BssSI	CACGAG	3 cut(s)	1524, 1842, 1996
BssT1I	CCWWGG	1 cut(s)	1543
Bst2BI	CACGAG	3 cut(s)	1524, 1842, 1996
Bst2UI	CCWGG	4 cut(s)	94, 458, 597, 939
Bst4CI	ACNGT	7 cut(s)	9, 253, 697, 876, 1276, 1347, 1794
Bst6I	CTCTTC	4 cut(s)	71, 80, 1581, 2377
BstAUI	TGTACA	3 cut(s)	660, 1230, 2278
BstBI	TTCGAA	1 cut(s)	168
BstC8I	GCNNGC	3 cut(s)	1332, 1359, 1383
BstDEI	CTNAG	5 cut(s)	228, 617, 1136, 2200, 2358
BstDSI	CCRYGG	2 cut(s)	1543, 1972
BstF5I	GGATG	9 cut(s)	136, 466, 499, 641, 814, 998, 1734, 1884, 2362
BstFNI	CGCG	1 cut(s)	385
BstH2I	RGCGCY	1 cut(s)	1819
BstHHI	GCGC	3 cut(s)	37, 1818, 2269
BstMAI	GTCTC	2 cut(s)	722, 1029
BstMCI	CGRYCG	1 cut(s)	389
BstMWI	GCNNNNNNNGC	5 cut(s)	897, 1289, 1358, 1664, 2312
BstNI	CCWGG	4 cut(s)	94, 458, 597, 939
BstNSI	RCATGY	4 cut(s)	1389, 1750, 2029, 2171
BstSCI	CCNGG	6 cut(s)	92, 187, 456, 595, 854, 937
BstSFI	CTRYAG	1 cut(s)	504
BstUI	CGCG	1 cut(s)	385
BstV1I	GCAGC	2 cut(s)	1270, 1517
BstV2I	GAAGAC	1 cut(s)	840
BstX2I	RGATCY	4 cut(s)	1249, 1894, 2143, 2423
BstYI	RGATCY	4 cut(s)	1249, 1894, 2143, 2423
Bsu15I	ATCGAT	1 cut(s)	1079
Bsu36I	CCTNAGG	1 cut(s)	617
BsuRI	GGCC	4 cut(s)	819, 1542, 2115, 2198
BsuTUI	ATCGAT	1 cut(s)	1079
BtgI	CCRYGG	2 cut(s)	1543, 1972
BtsCI	GGATG	9 cut(s)	136, 466, 499, 641, 814, 998, 1734, 1884, 2362
BtsIMutI	CAGTG	8 cut(s)	5, 258, 702, 773, 881, 1167, 2116, 2219
BveI	ACCTGC	1 cut(s)	2311
Cac8I	GCNNGC	3 cut(s)	1332, 1359, 1383
CciI	TCATGA	2 cut(s)	741, 2247
CfoI	GCGC	3 cut(s)	37, 1818, 2269
Cfr10I	RCCGGY	1 cut(s)	204
Cfr13I	GGNCC	3 cut(s)	1794, 2196, 2296
ClaI	ATCGAT	1 cut(s)	1079
Csp6I	GTAC	5 cut(s)	661, 1231, 1367, 2038, 2279
CspAI	ACCGGT	1 cut(s)	204
CviQI	GTAC	5 cut(s)	661, 1231, 1367, 2038, 2279
DdeI	CTNAG	5 cut(s)	228, 617, 1136, 2200, 2358
DrdI	GACNNNNNNGTC	1 cut(s)	2224
DseDI	GACNNNNNNGTC	1 cut(s)	2224
EaeI	YGGCCR	2 cut(s)	1540, 2113
Eam1104I	CTCTTC	4 cut(s)	71, 80, 1581, 2377
EarI	CTCTTC	4 cut(s)	71, 80, 1581, 2377
Ecl136II	GAGCTC	1 cut(s)	2179
Eco130I	CCWWGG	1 cut(s)	1543
Eco24I	GRGCYC	1 cut(s)	2181
Eco47I	GGWCC	2 cut(s)	1794, 2296
Eco47III	AGCGCT	1 cut(s)	1817
Eco53kI	GAGCTC	1 cut(s)	2179
Eco57I	CTGAAG	5 cut(s)	146, 166, 255, 1605, 2243
Eco81I	CCTNAGG	1 cut(s)	617
EcoICRI	GAGCTC	1 cut(s)	2179
EcoO109I	RGGNCCY	1 cut(s)	2196
EcoRI	GAATTC	1 cut(s)	1640
EcoRII	CCWGG	4 cut(s)	92, 456, 595, 937
EcoT14I	CCWWGG	1 cut(s)	1543
EcoT38I	GRGCYC	1 cut(s)	2181
ErhI	CCWWGG	1 cut(s)	1543
Esp3I	CGTCTC	1 cut(s)	1029
FalI	AAGNNNNNCTT	2 cut(s)	45, 77
FaqI	GGGAC	5 cut(s)	110, 620, 838, 997, 1597
FauNDI	CATATG	1 cut(s)	2017
FbaI	TGATCA	1 cut(s)	496
FblI	GTMKAC	1 cut(s)	371
Fnu4HI	GCNGC	2 cut(s)	1284, 1506
FokI	GGATG	9 cut(s)	143, 473, 486, 628, 821, 1005, 1741, 1871, 2349
FriOI	GRGCYC	1 cut(s)	2181
Fsp4HI	GCNGC	2 cut(s)	1284, 1506
FspBI	CTAG	8 cut(s)	198, 329, 446, 1358, 1739, 1905, 1919, 1962
FspI	TGCGCA	1 cut(s)	36
GlaI	GCGC	3 cut(s)	36, 1817, 2268
GluI	GCNGC	2 cut(s)	1284, 1506
GsuI	CTGGAG	1 cut(s)	2159
HaeII	RGCGCY	1 cut(s)	1819
HaeIII	GGCC	4 cut(s)	819, 1542, 2115, 2198
HapII	CCGG	5 cut(s)	189, 205, 856, 2116, 2366
HhaI	GCGC	3 cut(s)	37, 1818, 2269
Hin6I	GCGC	3 cut(s)	35, 1816, 2267
HinP1I	GCGC	3 cut(s)	35, 1816, 2267
HindIII	AAGCTT	1 cut(s)	1759
HinfI	GANTC	8 cut(s)	89, 782, 970, 1684, 1868, 2213, 2288, 2429
HpaII	CCGG	5 cut(s)	189, 205, 856, 2116, 2366
HphI	GGTGA	5 cut(s)	550, 1853, 2022, 2198, 2348
Hpy166II	GTNNAC	8 cut(s)	372, 403, 541, 935, 1231, 1233, 2279, 2377
Hpy188I	TCNGA	9 cut(s)	80, 215, 231, 636, 1303, 1899, 1948, 2071, 2428
Hpy188III	TCNNGA	9 cut(s)	722, 742, 1070, 1490, 1623, 1872, 1919, 2138, 2248
Hpy8I	GTNNAC	8 cut(s)	372, 403, 541, 935, 1231, 1233, 2279, 2377
HpyAV	CCTTC	7 cut(s)	121, 830, 1042, 1172, 1807, 2157, 2183
HpyCH4III	ACNGT	7 cut(s)	9, 253, 697, 876, 1276, 1347, 1794
HpyCH4IV	ACGT	2 cut(s)	1257, 1306
HpyF10VI	GCNNNNNNNGC	5 cut(s)	897, 1289, 1358, 1664, 2312
HpyF3I	CTNAG	5 cut(s)	228, 617, 1136, 2200, 2358
HpySE526I	ACGT	2 cut(s)	1257, 1306
HspAI	GCGC	3 cut(s)	35, 1816, 2267
Ksp22I	TGATCA	1 cut(s)	496
LmnI	GCTCC	2 cut(s)	1085, 2176
Lsp1109I	GCAGC	2 cut(s)	1270, 1517
LweI	GCATC	3 cut(s)	650, 2351, 2371
MaeI	CTAG	8 cut(s)	198, 329, 446, 1358, 1739, 1905, 1919, 1962
MaeII	ACGT	2 cut(s)	1257, 1306
MaeIII	GTNAC	4 cut(s)	582, 712, 860, 2028
MfeI	CAATTG	1 cut(s)	702
MflI	RGATCY	4 cut(s)	1249, 1894, 2143, 2423
MhlI	GDGCHC	4 cut(s)	306, 359, 1169, 2181
MlsI	TGGCCA	1 cut(s)	1542
MluNI	TGGCCA	1 cut(s)	1542
MlyI	GAGTC	1 cut(s)	1862
MmeI	TCCRAC	3 cut(s)	193, 1990, 2079
Mox20I	TGGCCA	1 cut(s)	1542
MroXI	GAANNNNTTC	2 cut(s)	1144, 2056
MscI	TGGCCA	1 cut(s)	1542
MseI	TTAA	5 cut(s)	515, 569, 912, 1062, 1094
MslI	CAYNNNNRTG	3 cut(s)	978, 1226, 1390
Msp20I	TGGCCA	1 cut(s)	1542
MspI	CCGG	5 cut(s)	189, 205, 856, 2116, 2366
MspR9I	CCNGG	6 cut(s)	94, 189, 458, 597, 856, 939
MunI	CAATTG	1 cut(s)	702
Mva1269I	GAATGC	1 cut(s)	1273
MvaI	CCWGG	4 cut(s)	94, 458, 597, 939
MvnI	CGCG	1 cut(s)	385
MwoI	GCNNNNNNNGC	5 cut(s)	897, 1289, 1358, 1664, 2312
NciI	CCSGG	2 cut(s)	189, 856
NcoI	CCATGG	1 cut(s)	1543
NdeI	CATATG	1 cut(s)	2017
NheI	GCTAGC	1 cut(s)	1357
NlaIV	GGNNCC	3 cut(s)	113, 883, 2145
NmuCI	GTSAC	4 cut(s)	582, 712, 860, 2028
NsbI	TGCGCA	1 cut(s)	36
NspI	RCATGY	4 cut(s)	1389, 1750, 2029, 2171
NspV	TTCGAA	1 cut(s)	168
PagI	TCATGA	2 cut(s)	741, 2247
PciI	ACATGT	2 cut(s)	2025, 2167
PctI	GAATGC	1 cut(s)	1273
PdmI	GAANNNNTTC	2 cut(s)	1144, 2056
PfeI	GAWTC	7 cut(s)	89, 782, 970, 1684, 2213, 2288, 2429
PflMI	CCANNNNNTGG	1 cut(s)	108
PfoI	TCCNGGA	1 cut(s)	456
PinAI	ACCGGT	1 cut(s)	204
PkrI	GCNGC	2 cut(s)	1285, 1507
PleI	GAGTC	1 cut(s)	1862
PpsI	GAGTC	1 cut(s)	1862
PscI	ACATGT	2 cut(s)	2025, 2167
PsiI	TTATAA	2 cut(s)	345, 1566
Psp124BI	GAGCTC	1 cut(s)	2181
Psp1406I	AACGTT	1 cut(s)	1306
Psp6I	CCWGG	4 cut(s)	92, 456, 595, 937
PspGI	CCWGG	4 cut(s)	92, 456, 595, 937
PspN4I	GGNNCC	3 cut(s)	113, 883, 2145
PspPI	GGNCC	3 cut(s)	1794, 2196, 2296
PsuI	RGATCY	4 cut(s)	1249, 1894, 2143, 2423
RsaI	GTAC	5 cut(s)	662, 1232, 1368, 2039, 2280
RsaNI	GTAC	5 cut(s)	661, 1231, 1367, 2038, 2279
RseI	CAYNNNNRTG	3 cut(s)	978, 1226, 1390
SacI	GAGCTC	1 cut(s)	2181
SaqAI	TTAA	5 cut(s)	515, 569, 912, 1062, 1094
SatI	GCNGC	2 cut(s)	1284, 1506
Sau96I	GGNCC	3 cut(s)	1794, 2196, 2296
SchI	GAGTC	1 cut(s)	1862
ScrFI	CCNGG	6 cut(s)	94, 189, 458, 597, 856, 939
SduI	GDGCHC	4 cut(s)	306, 359, 1169, 2181
SfaNI	GCATC	3 cut(s)	650, 2351, 2371
SfcI	CTRYAG	1 cut(s)	504
SfuI	TTCGAA	1 cut(s)	168
SinI	GGWCC	2 cut(s)	1794, 2296
SmiMI	CAYNNNNRTG	3 cut(s)	978, 1226, 1390
SmlI	CTYRAG	1 cut(s)	1870
SmoI	CTYRAG	1 cut(s)	1870
SpeI	ACTAGT	1 cut(s)	328
SsiI	CCGC	4 cut(s)	385, 788, 879, 1155
SspI	AATATT	3 cut(s)	1912, 1968, 2046
SspMI	CTAG	8 cut(s)	198, 329, 446, 1358, 1739, 1905, 1919, 1962
SstI	GAGCTC	1 cut(s)	2181
StyD4I	CCNGG	6 cut(s)	92, 187, 456, 595, 854, 937
StyI	CCWWGG	1 cut(s)	1543
TaaI	ACNGT	7 cut(s)	9, 253, 697, 876, 1276, 1347, 1794
TaiI	ACGT	2 cut(s)	1260, 1309
TaqII	GACCGA	1 cut(s)	2313
TatI	WGTACW	3 cut(s)	660, 1230, 2278
TfiI	GAWTC	7 cut(s)	89, 782, 970, 1684, 2213, 2288, 2429
Tru1I	TTAA	5 cut(s)	515, 569, 912, 1062, 1094
Tru9I	TTAA	5 cut(s)	515, 569, 912, 1062, 1094
TscAI	CASTG	8 cut(s)	12, 258, 702, 780, 881, 1174, 2116, 2226
TseFI	GTSAC	4 cut(s)	582, 712, 860, 2028
TseI	GCWGC	2 cut(s)	1283, 1505
Tsp45I	GTSAC	4 cut(s)	582, 712, 860, 2028
TspGWI	ACGGA	2 cut(s)	1989, 2436
TspRI	CASTG	8 cut(s)	12, 258, 702, 780, 881, 1174, 2116, 2226
Van91I	CCANNNNNTGG	1 cut(s)	108
VpaK11BI	GGWCC	2 cut(s)	1794, 2296
XapI	RAATTY	4 cut(s)	193, 216, 1640, 1941
XbaI	TCTAGA	1 cut(s)	1918
XceI	RCATGY	4 cut(s)	1389, 1750, 2029, 2171
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1550
XmiI	GTMKAC	1 cut(s)	371
XmnI	GAANNNNTTC	2 cut(s)	1144, 2056
XspI	CTAG	8 cut(s)	198, 329, 446, 1358, 1739, 1905, 1919, 1962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.