High mobility group B protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD01G1212400.v1.1 MD05G1032100.v1.1 MD05G1108200.v1.1 |
| pyrus_communis | pycom04g02950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 101 |
| AciI | CCGC | 1 cut(s) | 176 |
| AfeI | AGCGCT | 1 cut(s) | 22 |
| AgsI | TTSAA | 2 cut(s) | 87, 109 |
| AjiI | CACGTC | 1 cut(s) | 117 |
| AluBI | AGCT | 1 cut(s) | 34 |
| AluI | AGCT | 1 cut(s) | 34 |
| Aor51HI | AGCGCT | 1 cut(s) | 22 |
| AspLEI | GCGC | 1 cut(s) | 23 |
| BbvCI | CCTCAGC | 1 cut(s) | 35 |
| BccI | CCATC | 1 cut(s) | 158 |
| BfoI | RGCGCY | 1 cut(s) | 24 |
| BmgBI | CACGTC | 1 cut(s) | 117 |
| Bpu10I | CCTNAGC | 1 cut(s) | 35 |
| BsaJI | CCNNGG | 1 cut(s) | 90 |
| BseDI | CCNNGG | 1 cut(s) | 90 |
| BseGI | GGATG | 1 cut(s) | 169 |
| BseMII | CTCAG | 1 cut(s) | 26 |
| BslFI | GGGAC | 1 cut(s) | 158 |
| BsmFI | GGGAC | 1 cut(s) | 158 |
| Bsp143I | GATC | 1 cut(s) | 140 |
| Bsp19I | CCATGG | 1 cut(s) | 90 |
| BspACI | CCGC | 1 cut(s) | 176 |
| BspCNI | CTCAG | 1 cut(s) | 27 |
| BssECI | CCNNGG | 1 cut(s) | 90 |
| BssMI | GATC | 1 cut(s) | 140 |
| BssNAI | GTATAC | 1 cut(s) | 102 |
| BssT1I | CCWWGG | 1 cut(s) | 90 |
| Bst1107I | GTATAC | 1 cut(s) | 102 |
| BstC8I | GCNNGC | 1 cut(s) | 129 |
| BstDEI | CTNAG | 2 cut(s) | 35, 179 |
| BstDSI | CCRYGG | 1 cut(s) | 90 |
| BstF5I | GGATG | 1 cut(s) | 169 |
| BstH2I | RGCGCY | 1 cut(s) | 24 |
| BstHHI | GCGC | 1 cut(s) | 23 |
| BstKTI | GATC | 1 cut(s) | 143 |
| BstMBI | GATC | 1 cut(s) | 140 |
| BstZ17I | GTATAC | 1 cut(s) | 102 |
| BtgI | CCRYGG | 1 cut(s) | 90 |
| BtrI | CACGTC | 1 cut(s) | 117 |
| BtsCI | GGATG | 1 cut(s) | 169 |
| Cac8I | GCNNGC | 1 cut(s) | 129 |
| CfoI | GCGC | 1 cut(s) | 23 |
| CviAII | CATG | 1 cut(s) | 91 |
| CviJI | RGCY | 1 cut(s) | 34 |
| CviKI_1 | RGCY | 1 cut(s) | 34 |
| DdeI | CTNAG | 2 cut(s) | 35, 179 |
| DpnI | GATC | 1 cut(s) | 142 |
| DpnII | GATC | 1 cut(s) | 140 |
| Eco130I | CCWWGG | 1 cut(s) | 90 |
| Eco47III | AGCGCT | 1 cut(s) | 22 |
| EcoT14I | CCWWGG | 1 cut(s) | 90 |
| ErhI | CCWWGG | 1 cut(s) | 90 |
| FaeI | CATG | 1 cut(s) | 94 |
| FaiI | YATR | 2 cut(s) | 92, 102 |
| FaqI | GGGAC | 1 cut(s) | 158 |
| FatI | CATG | 1 cut(s) | 90 |
| FauI | CCCGC | 1 cut(s) | 183 |
| FblI | GTMKAC | 1 cut(s) | 101 |
| FokI | GGATG | 1 cut(s) | 176 |
| GlaI | GCGC | 1 cut(s) | 22 |
| HaeII | RGCGCY | 1 cut(s) | 24 |
| HhaI | GCGC | 1 cut(s) | 23 |
| Hin1II | CATG | 1 cut(s) | 94 |
| Hin6I | GCGC | 1 cut(s) | 21 |
| HinP1I | GCGC | 1 cut(s) | 21 |
| Hpy166II | GTNNAC | 2 cut(s) | 102, 114 |
| Hpy188I | TCNGA | 1 cut(s) | 121 |
| Hpy8I | GTNNAC | 2 cut(s) | 102, 114 |
| HpyAV | CCTTC | 1 cut(s) | 65 |
| HpyCH4IV | ACGT | 1 cut(s) | 116 |
| HpyF3I | CTNAG | 2 cut(s) | 35, 179 |
| HpySE526I | ACGT | 1 cut(s) | 116 |
| Hsp92II | CATG | 1 cut(s) | 94 |
| HspAI | GCGC | 1 cut(s) | 21 |
| Kzo9I | GATC | 1 cut(s) | 140 |
| LpnPI | CCDG | 2 cut(s) | 59, 141 |
| MaeII | ACGT | 1 cut(s) | 116 |
| MalI | GATC | 1 cut(s) | 142 |
| MboI | GATC | 1 cut(s) | 140 |
| MnlI | CCTC | 1 cut(s) | 30 |
| NcoI | CCATGG | 1 cut(s) | 90 |
| NdeII | GATC | 1 cut(s) | 140 |
| NlaIII | CATG | 1 cut(s) | 94 |
| Sau3AI | GATC | 1 cut(s) | 140 |
| SetI | ASST | 2 cut(s) | 36, 119 |
| SgeI | CNNG | 5 cut(s) | 30, 86, 103, 127, 140 |
| SsiI | CCGC | 1 cut(s) | 176 |
| StyI | CCWWGG | 1 cut(s) | 90 |
| TaiI | ACGT | 1 cut(s) | 119 |
| TaqI | TCGA | 1 cut(s) | 139 |
| XmiI | GTMKAC | 1 cut(s) | 101 |