MD05G1215700.v1.1

Peptidyl-prolyl cis-trans isomerase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
34664002 .. 34664685
684 bp
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UTR
Exon/CDS
Intron
MD05G1215700.v1.1.491

Sequence Viewer

Length: 189 bp
ATGATTTGGATTCTGATGATGTTTGGTTTCGGGAAATTCCGAAATACCGAAAATATTTCGGGAATCCCGAAATTTGGGAATCCGAAATTTTGGTTCGGGATCGGTTATGAGATTTACGTCCCGAAAATTTTCGGTTCGGGATTTGATATGTCATTTTTGGTTCGGTATCCCATACCAAACCAGCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

63

Amino Acids

7.24

Weight (kDa)

9.6

Isoelectric Point (pI)

30.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024467)

Species Orthologous Gene IDs
malus_domestica MD05G1215700.v1.1
pyrus_communis pycom01g01920 pycom04g02240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 107
AcsI RAATTY 4 cut(s) 35, 71, 86, 126
AfiI CCNNNNNNNGG 1 cut(s) 74
AlwI GGATC 1 cut(s) 107
ApoI RAATTY 4 cut(s) 35, 71, 86, 126
Asp700I GAANNNNTTC 1 cut(s) 128
BciVI GTATCC 1 cut(s) 177
BfuI GTATCC 1 cut(s) 177
Bsc4I CCNNNNNNNGG 1 cut(s) 74
BseLI CCNNNNNNNGG 1 cut(s) 74
BslFI GGGAC 1 cut(s) 104
BslI CCNNNNNNNGG 1 cut(s) 74
BsmFI GGGAC 1 cut(s) 104
Bsp143I GATC 1 cut(s) 99
BspPI GGATC 1 cut(s) 107
BssMI GATC 1 cut(s) 99
BstKTI GATC 1 cut(s) 102
BstMBI GATC 1 cut(s) 99
BsuI GTATCC 1 cut(s) 177
CviJI RGCY 1 cut(s) 184
CviKI_1 RGCY 1 cut(s) 184
DpnI GATC 1 cut(s) 101
DpnII GATC 1 cut(s) 99
FaiI YATR 3 cut(s) 108, 149, 173
FaqI GGGAC 1 cut(s) 104
HinfI GANTC 3 cut(s) 10, 63, 79
Hpy188I TCNGA 3 cut(s) 15, 41, 84
Hpy188III TCNNGA 6 cut(s) 31, 60, 67, 97, 121, 138
HpyCH4IV ACGT 1 cut(s) 117
HpySE526I ACGT 1 cut(s) 117
Kzo9I GATC 1 cut(s) 99
MaeII ACGT 1 cut(s) 117
MalI GATC 1 cut(s) 101
MboI GATC 1 cut(s) 99
MluCI AATT 4 cut(s) 35, 71, 86, 126
MroXI GAANNNNTTC 1 cut(s) 128
NdeII GATC 1 cut(s) 99
PcsI WCGNNNNNNNCGW 1 cut(s) 65
PdmI GAANNNNTTC 1 cut(s) 128
PfeI GAWTC 3 cut(s) 10, 63, 79
Sau3AI GATC 1 cut(s) 99
SetI ASST 1 cut(s) 120
SgeI CNNG 6 cut(s) 43, 72, 79, 109, 133, 150
Sse9I AATT 4 cut(s) 35, 71, 86, 126
SspI AATATT 1 cut(s) 55
TaiI ACGT 1 cut(s) 120
TasI AATT 4 cut(s) 35, 71, 86, 126
TfiI GAWTC 3 cut(s) 10, 63, 79
XapI RAATTY 4 cut(s) 35, 71, 86, 126
XmnI GAANNNNTTC 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.