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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11112 |
| fragaria_vesca | FvH4_3g04560 FvH4_6g14200 |
| malus_domestica | MD05G1322400.v1.1 |
| prunus_persica | Prupe.4G040400_v2.0.a1 Prupe.4G040400_v2.0.a1 |
| pyrus_communis | pycom10g25310 |
| rosa_chinensis | RchiOBHm_Chr5g0007481 |
| rosa_laevigata | RLG00000031460 |
| rosa_multiflora | Rmu_ssc0000182.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00068910 |
| rosa_rugosa | Rorug04G0427500 |
| rosa_samantha | Rh5AG055700 Rh5BG053200 Rh5CG063100 Rh5DG052200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 41 |
| AciI | CCGC | 2 cut(s) | 55, 124 |
| AclWI | GGATC | 1 cut(s) | 140 |
| AcsI | RAATTY | 2 cut(s) | 109, 166 |
| AfaI | GTAC | 1 cut(s) | 44 |
| AflIII | ACRYGT | 1 cut(s) | 39 |
| AgsI | TTSAA | 1 cut(s) | 217 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 28 |
| AluBI | AGCT | 4 cut(s) | 66, 86, 156, 183 |
| AluI | AGCT | 4 cut(s) | 66, 86, 156, 183 |
| AlwI | GGATC | 1 cut(s) | 140 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 127 |
| ApeKI | GCWGC | 3 cut(s) | 86, 121, 209 |
| ApoI | RAATTY | 2 cut(s) | 109, 166 |
| AsuC2I | CCSGG | 1 cut(s) | 271 |
| AsuHPI | GGTGA | 2 cut(s) | 46, 304 |
| BbvCI | CCTCAGC | 2 cut(s) | 128, 231 |
| BbvI | GCAGC | 3 cut(s) | 73, 133, 196 |
| BcnI | CCSGG | 1 cut(s) | 271 |
| BisI | GCNGC | 4 cut(s) | 87, 122, 125, 210 |
| BlsI | GCNGC | 4 cut(s) | 88, 123, 126, 211 |
| Bme1390I | CCNGG | 1 cut(s) | 271 |
| BmrFI | CCNGG | 1 cut(s) | 271 |
| BpmI | CTGGAG | 1 cut(s) | 94 |
| Bpu10I | CCTNAGC | 2 cut(s) | 128, 231 |
| BpuMI | CCSGG | 1 cut(s) | 271 |
| Bse1I | ACTGG | 1 cut(s) | 139 |
| BseMII | CTCAG | 2 cut(s) | 119, 245 |
| BseNI | ACTGG | 1 cut(s) | 139 |
| BseXI | GCAGC | 3 cut(s) | 73, 133, 196 |
| BsgI | GTGCAG | 1 cut(s) | 79 |
| Bsh1236I | CGCG | 1 cut(s) | 41 |
| BsiSI | CCGG | 1 cut(s) | 270 |
| Bsp143I | GATC | 1 cut(s) | 145 |
| BspACI | CCGC | 2 cut(s) | 55, 124 |
| BspCNI | CTCAG | 2 cut(s) | 120, 244 |
| BspFNI | CGCG | 1 cut(s) | 41 |
| BspPI | GGATC | 1 cut(s) | 140 |
| BsrI | ACTGG | 1 cut(s) | 139 |
| BssMI | GATC | 1 cut(s) | 145 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 209 |
| BstDEI | CTNAG | 2 cut(s) | 128, 231 |
| BstFNI | CGCG | 1 cut(s) | 41 |
| BstKTI | GATC | 1 cut(s) | 148 |
| BstMBI | GATC | 1 cut(s) | 145 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 209 |
| BstNSI | RCATGY | 1 cut(s) | 224 |
| BstSCI | CCNGG | 1 cut(s) | 269 |
| BstUI | CGCG | 1 cut(s) | 41 |
| BstV1I | GCAGC | 3 cut(s) | 73, 133, 196 |
| CaiI | CAGNNNCTG | 1 cut(s) | 127 |
| Csp6I | GTAC | 1 cut(s) | 43 |
| CviAII | CATG | 1 cut(s) | 221 |
| CviJI | RGCY | 6 cut(s) | 66, 86, 101, 127, 156, 183 |
| CviKI_1 | RGCY | 6 cut(s) | 66, 86, 101, 127, 156, 183 |
| CviQI | GTAC | 1 cut(s) | 43 |
| DdeI | CTNAG | 2 cut(s) | 128, 231 |
| DpnI | GATC | 1 cut(s) | 147 |
| DpnII | GATC | 1 cut(s) | 145 |
| Eco32I | GATATC | 1 cut(s) | 259 |
| EcoRI | GAATTC | 1 cut(s) | 109 |
| EcoRV | GATATC | 1 cut(s) | 259 |
| FaeI | CATG | 1 cut(s) | 224 |
| FaiI | YATR | 4 cut(s) | 8, 144, 222, 282 |
| FatI | CATG | 1 cut(s) | 220 |
| Fnu4HI | GCNGC | 4 cut(s) | 87, 122, 125, 210 |
| Fsp4HI | GCNGC | 4 cut(s) | 87, 122, 125, 210 |
| GluI | GCNGC | 4 cut(s) | 87, 122, 125, 210 |
| GsuI | CTGGAG | 1 cut(s) | 94 |
| HapII | CCGG | 1 cut(s) | 270 |
| Hin1II | CATG | 1 cut(s) | 224 |
| HpaII | CCGG | 1 cut(s) | 270 |
| HphI | GGTGA | 2 cut(s) | 46, 304 |
| Hpy166II | GTNNAC | 1 cut(s) | 37 |
| Hpy188I | TCNGA | 2 cut(s) | 250, 301 |
| Hpy188III | TCNNGA | 2 cut(s) | 73, 106 |
| Hpy8I | GTNNAC | 1 cut(s) | 37 |
| Hpy99I | CGWCG | 2 cut(s) | 176, 179 |
| HpyAV | CCTTC | 2 cut(s) | 91, 159 |
| HpyCH4IV | ACGT | 1 cut(s) | 134 |
| HpyCH4V | TGCA | 4 cut(s) | 60, 89, 203, 224 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 209 |
| HpyF3I | CTNAG | 2 cut(s) | 128, 231 |
| HpySE526I | ACGT | 1 cut(s) | 134 |
| Hsp92II | CATG | 1 cut(s) | 224 |
| Kzo9I | GATC | 1 cut(s) | 145 |
| LmnI | GCTCC | 1 cut(s) | 63 |
| LpnPI | CCDG | 9 cut(s) | 34, 46, 58, 99, 152, 169, 176, 177, 283 |
| Lsp1109I | GCAGC | 3 cut(s) | 73, 133, 196 |
| MaeII | ACGT | 1 cut(s) | 134 |
| MalI | GATC | 1 cut(s) | 147 |
| MboI | GATC | 1 cut(s) | 145 |
| MboII | GAAGA | 1 cut(s) | 33 |
| MluCI | AATT | 2 cut(s) | 109, 166 |
| MluI | ACGCGT | 1 cut(s) | 39 |
| MnlI | CCTC | 4 cut(s) | 87, 123, 190, 240 |
| MspA1I | CMGCKG | 1 cut(s) | 124 |
| MspI | CCGG | 1 cut(s) | 270 |
| MspR9I | CCNGG | 1 cut(s) | 271 |
| MvnI | CGCG | 1 cut(s) | 41 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 209 |
| NciI | CCSGG | 1 cut(s) | 271 |
| NdeII | GATC | 1 cut(s) | 145 |
| NlaIII | CATG | 1 cut(s) | 224 |
| NspI | RCATGY | 1 cut(s) | 224 |
| PkrI | GCNGC | 4 cut(s) | 88, 123, 126, 211 |
| PstNI | CAGNNNCTG | 1 cut(s) | 127 |
| RsaI | GTAC | 1 cut(s) | 44 |
| RsaNI | GTAC | 1 cut(s) | 43 |
| SatI | GCNGC | 4 cut(s) | 87, 122, 125, 210 |
| Sau3AI | GATC | 1 cut(s) | 145 |
| ScrFI | CCNGG | 1 cut(s) | 271 |
| SetI | ASST | 6 cut(s) | 68, 88, 137, 158, 185, 232 |
| Sse9I | AATT | 2 cut(s) | 109, 166 |
| SsiI | CCGC | 2 cut(s) | 55, 124 |
| StyD4I | CCNGG | 1 cut(s) | 269 |
| TaiI | ACGT | 1 cut(s) | 137 |
| TaqI | TCGA | 2 cut(s) | 152, 171 |
| TasI | AATT | 2 cut(s) | 109, 166 |
| TauI | GCSGC | 1 cut(s) | 127 |
| TseI | GCWGC | 3 cut(s) | 86, 121, 209 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 192 |
| XapI | RAATTY | 2 cut(s) | 109, 166 |
| XceI | RCATGY | 1 cut(s) | 224 |