MD06G1007600.v1.1

WAT1-related protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Forward (+)
754392 .. 755166
775 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1007600.v1.1.491

Sequence Viewer

Length: 459 bp
ATGGAAAACATTATGGAGAAGTATGACATTGAGGCTTTATGGCTTGCAACCATAGTACGGTTTTCAACTATGATCCCCAGCCTTGTTATTGCCCTGGCCACCACTCATGGACGAGCCTATAAGTGGGTTATGGGTTGGGACTTCAACACGTTTTGCTGGGTATTCGCGGGCATTTGTGCTGGTCTAGGGCAGTATTTGGGGACCACTTTGACAAAGAAGACGATTGCTACATTTGTGTCGTCATTTACCCCAATATCCATGATTTTAGTTATTGGGCTATCAGCTATGATCGTCCATGATCGCATAAAAAAACCGAGTATTGGGGGTGTCATAATGATCGTGATAAGGCTTTGCATTTTTCATTGGCGAGAATATCGATCAACATCTAAAGAGGGGGCTCAAGCTGAGAAGGAGCGTTTGAGGTGGAGGCTCAATCTACGGAGGAGGTTCAAGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

153

Amino Acids

17.52

Weight (kDa)

10.08

Isoelectric Point (pI)

34.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024258)

Species Orthologous Gene IDs
malus_domestica MD06G1007600.v1.1 MD06G1008400.v1.1
pyrus_communis pycom06g00670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 167
AciI CCGC 1 cut(s) 167
AclWI GGATC 1 cut(s) 67
AcoI YGGCCR 1 cut(s) 96
AfaI GTAC 1 cut(s) 57
AfiI CCNNNNNNNGG 3 cut(s) 57, 123, 320
AflIII ACRYGT 1 cut(s) 147
AgsI TTSAA 3 cut(s) 66, 145, 451
AjnI CCWGG 1 cut(s) 93
AluBI AGCT 3 cut(s) 284, 404, 454
AluI AGCT 3 cut(s) 284, 404, 454
AlwI GGATC 1 cut(s) 67
AoxI GGCC 1 cut(s) 96
AspS9I GGNCC 1 cut(s) 201
AvaII GGWCC 1 cut(s) 201
BalI TGGCCA 1 cut(s) 98
BanII GRGCYC 1 cut(s) 400
BbsI GAAGAC 1 cut(s) 224
BciT130I CCWGG 1 cut(s) 95
BfaI CTAG 1 cut(s) 185
Bme1390I CCNGG 1 cut(s) 95
Bme18I GGWCC 1 cut(s) 201
BmgT120I GGNCC 1 cut(s) 201
BmiI GGNNCC 1 cut(s) 202
BmrFI CCNGG 1 cut(s) 95
BpiI GAAGAC 1 cut(s) 224
BpuEI CTTGAG 1 cut(s) 384
Bsa29I ATCGAT 1 cut(s) 376
BsaBI GATNNNNATC 1 cut(s) 382
BsaJI CCNNGG 1 cut(s) 93
Bsc4I CCNNNNNNNGG 3 cut(s) 57, 123, 320
Bse8I GATNNNNATC 1 cut(s) 382
BseBI CCWGG 1 cut(s) 95
BseCI ATCGAT 1 cut(s) 376
BseDI CCNNGG 1 cut(s) 93
BseJI GATNNNNATC 1 cut(s) 382
BseLI CCNNNNNNNGG 3 cut(s) 57, 123, 320
BseMII CTCAG 1 cut(s) 396
BseRI GAGGAG 1 cut(s) 457
BseYI CCCAGC 2 cut(s) 77, 156
Bsh1236I CGCG 1 cut(s) 167
BshFI GGCC 1 cut(s) 98
BshVI ATCGAT 1 cut(s) 376
BslFI GGGAC 2 cut(s) 152, 214
BslI CCNNNNNNNGG 3 cut(s) 57, 123, 320
BsmFI GGGAC 2 cut(s) 152, 214
BsnI GGCC 1 cut(s) 98
Bsp1286I GDGCHC 1 cut(s) 400
Bsp143I GATC 5 cut(s) 72, 288, 298, 336, 377
BspACI CCGC 1 cut(s) 167
BspANI GGCC 1 cut(s) 98
BspCNI CTCAG 1 cut(s) 397
BspDI ATCGAT 1 cut(s) 376
BspFNI CGCG 1 cut(s) 167
BspLI GGNNCC 1 cut(s) 202
BspPI GGATC 1 cut(s) 67
BssECI CCNNGG 1 cut(s) 93
BssMI GATC 5 cut(s) 72, 288, 298, 336, 377
Bst2UI CCWGG 1 cut(s) 95
Bst4CI ACNGT 1 cut(s) 60
BstC8I GCNNGC 2 cut(s) 45, 169
BstDEI CTNAG 1 cut(s) 405
BstFNI CGCG 1 cut(s) 167
BstKTI GATC 5 cut(s) 75, 291, 301, 339, 380
BstMBI GATC 5 cut(s) 72, 288, 298, 336, 377
BstNI CCWGG 1 cut(s) 95
BstSCI CCNGG 1 cut(s) 93
BstUI CGCG 1 cut(s) 167
BstV2I GAAGAC 1 cut(s) 224
Bsu15I ATCGAT 1 cut(s) 376
BsuRI GGCC 1 cut(s) 98
BsuTUI ATCGAT 1 cut(s) 376
Cac8I GCNNGC 2 cut(s) 45, 169
Cfr13I GGNCC 1 cut(s) 201
ClaI ATCGAT 1 cut(s) 376
Csp6I GTAC 1 cut(s) 56
CviAII CATG 3 cut(s) 107, 259, 296
CviQI GTAC 1 cut(s) 56
DdeI CTNAG 1 cut(s) 405
DpnI GATC 5 cut(s) 74, 290, 300, 338, 379
DpnII GATC 5 cut(s) 72, 288, 298, 336, 377
EaeI YGGCCR 1 cut(s) 96
Eco24I GRGCYC 1 cut(s) 400
Eco47I GGWCC 1 cut(s) 201
EcoRII CCWGG 1 cut(s) 93
EcoT38I GRGCYC 1 cut(s) 400
FaeI CATG 3 cut(s) 110, 262, 299
FaqI GGGAC 2 cut(s) 152, 214
FatI CATG 3 cut(s) 106, 258, 295
FauI CCCGC 1 cut(s) 160
FriOI GRGCYC 1 cut(s) 400
FspBI CTAG 1 cut(s) 185
GsaI CCCAGC 2 cut(s) 81, 160
HaeIII GGCC 1 cut(s) 98
Hin1II CATG 3 cut(s) 110, 262, 299
Hpy188III TCNNGA 1 cut(s) 340
HpyAV CCTTC 1 cut(s) 403
HpyCH4III ACNGT 1 cut(s) 60
HpyCH4IV ACGT 1 cut(s) 149
HpyCH4V TGCA 2 cut(s) 47, 354
HpyF3I CTNAG 1 cut(s) 405
HpySE526I ACGT 1 cut(s) 149
Hsp92II CATG 3 cut(s) 110, 262, 299
Kzo9I GATC 5 cut(s) 72, 288, 298, 336, 377
LmnI GCTCC 1 cut(s) 412
LpnPI CCDG 5 cut(s) 80, 91, 107, 142, 165
MaeI CTAG 1 cut(s) 185
MaeII ACGT 1 cut(s) 149
MalI GATC 5 cut(s) 74, 290, 300, 338, 379
MboI GATC 5 cut(s) 72, 288, 298, 336, 377
MboII GAAGA 1 cut(s) 229
MhlI GDGCHC 1 cut(s) 400
MlsI TGGCCA 1 cut(s) 98
MluNI TGGCCA 1 cut(s) 98
MnlI CCTC 6 cut(s) 25, 385, 414, 420, 435, 438
Mox20I TGGCCA 1 cut(s) 98
MscI TGGCCA 1 cut(s) 98
Msp20I TGGCCA 1 cut(s) 98
MspR9I CCNGG 1 cut(s) 95
MvaI CCWGG 1 cut(s) 95
MvnI CGCG 1 cut(s) 167
NdeII GATC 5 cut(s) 72, 288, 298, 336, 377
NlaIII CATG 3 cut(s) 110, 262, 299
NlaIV GGNNCC 1 cut(s) 202
Psp6I CCWGG 1 cut(s) 93
PspFI CCCAGC 2 cut(s) 77, 156
PspGI CCWGG 1 cut(s) 93
PspN4I GGNNCC 1 cut(s) 202
PspPI GGNCC 1 cut(s) 201
RsaI GTAC 1 cut(s) 57
RsaNI GTAC 1 cut(s) 56
Sau3AI GATC 5 cut(s) 72, 288, 298, 336, 377
Sau96I GGNCC 1 cut(s) 201
ScrFI CCNGG 1 cut(s) 95
SduI GDGCHC 1 cut(s) 400
SetI ASST 6 cut(s) 152, 286, 406, 425, 449, 456
SinI GGWCC 1 cut(s) 201
SmlI CTYRAG 1 cut(s) 399
SmoI CTYRAG 1 cut(s) 399
SsiI CCGC 1 cut(s) 167
SspMI CTAG 1 cut(s) 185
StyD4I CCNGG 1 cut(s) 93
TaaI ACNGT 1 cut(s) 60
TaiI ACGT 1 cut(s) 152
TaqI TCGA 1 cut(s) 376
TspDTI ATGAA 1 cut(s) 350
TspGWI ACGGA 1 cut(s) 454
VpaK11BI GGWCC 1 cut(s) 201
XspI CTAG 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.