MD06G1034700.v1.1

Belongs to the peptidase C19 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0011909
Physical Location & Seq
Forward (+)
4316058 .. 4320209
4152 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1034700.v1.1.491

Sequence Viewer

Length: 2199 bp
ATGGCAGAAGCCCTCGATGGGTCTCCGCCATTTTCGCAGTCTGACGCCATGGACGACCTTGCTTTGGTTTGTATGCCAGAAAAGGCAGATGGGTTTTGGCCGTCTTCAACTCTGAAACCCCTAGGCGACCAATCTTTGGATACTTCTTTACCAAACCCTAACGGGTCTTCACCAATTTTTGAACAAGTACGAGAAGAAGAAGCTGAACCTTCTCCACCGCCTTCGCCTCTCAATCTTGTTGGTAATAATTTATCAATTTATGAATTGAATTCTTCCGATTCTTCACGAGTTTCTTCTTCTTGGTGTTCTCCGTGGAATTCATGGTCTTCTGCCAAGGGATCGCCGATTTCCTTTGAATCACAGTTTCATAAGGAAGAAACCAAGCCCTCTATGGTGAGTGCAGGGCTTGCAAATCTAGGTAACACTTGCTTTATGAATGCGATTCTGCAATGCTTTACGCACACTGTGCCGCTCTTGGAGGGTCTTCGTTCTTCCAATCATTCGATGCCATGTGATCGTGGTAGTGAAAGATTCTGCGTTCTTTGTGCTCTTCGTGACCACATTGATCTTTCAATAGCTTCTTCAGGAAGAGTTGTTTCGCCATGGAAACTTGTCGACAATTTGAATCACATCTCATCTTACTTCCAAAGATACCAGCAAGAAGATGCCCATGAGTTCTTGCAATGTTTTTTAGATAAACTTGAGAGATCTTCTATGGGTTCTATGAAAAAGGACGAGAGTTCATCTGTGCAAGACAAAAACCTTGTGGAAAAGGTTTTTGGTGGTCGTCTCGTAAGCAAACTCCGATGTTGCAATTGCGGTCATTGTTCTGACACATATGAACCTCTGATTGATCTGAGTCTGGAGATTGAAGAAGCAGACACTCTTCCAAGGGCTTTGGAGTCCTTCACTAAGATAGAAAATATCAATGACTCGGAGACAAAGTTTACATGTGAGAAGTGCAAGGAAAAAGTGTCAGTGGAGAAGCAGCTCGTGGTTGACCAGGCCCCTCAAGTTGCTGCATTTCACCTGAAGAGATTTAAGACTGACGGATCTAATGTTCAGAAGATTGAAAAACATGTAGAATTTCCTCTGGAGTTGGACTTGAAGCCCTACACCGGTGGCAGTGACATCGATATGGAATTGAAGTACGAACTTTATGCAATTGTGGAGCATGTTGGGTTCTCATCTACTTCTGGGCATTACTTTTGCTTCATTCGGTCCTCTCCAGATACATGGCATAGGTTGGATGACTCAAGGGTCACTAGGGTACGAGAGGAATTTGTTCTATCACAGGAGGCATACATTCTGTTCTATGCAAGGAAGGGTACTCCATGGTTTTTGAGTGTAGTGGAAGCACTAAAGCCATGCTTGGATCCAGCTGTTATGAGTACATCACCTAAGTCAGTTCTAGAGAATGTTGAGAGCACCAATAATTTATCCCCGAGTGTGAATTATGTTGATCGTTGTGCTGCCAATGAACCCAGAGATGCTTGTGAGACGGTTACTCTTTCGTTGCATCAAGTGAGACCTAAAGAGGTTGATGTCTCTGACACTAGAGGTGAAGCTAGTGAACTTTCTGAATGGATTAATGGGCCTAAGCGTGATGCTGGTTGTTCCCAGGAGACTACAGATACTGGTGCTGCCATTGATGCTTCAACTCCAGGTGGGGGAAGAAACAATTTTGATAAAACGTTGGGCAACACTGAGAATATATGTAGTACATCAACTCCTGTTGCAAATAGCTGCCACAAAAGGTCTGCTAAAGTTATTCTCCAACCTATGACGCCACCCAGATCTCCAAGCCTGGATTTGGTTTTTGAGTCTCGAGAACCAAGTTTTCATCTTCCACGCGATCATGTGAAGTCAGCGGACAATGTGACCTGTAAAAGATCATTGAACAATGCTATTCGAAAGGATCATTTGAAGTCAGCAGACAATGCGTTGTGTAAAAGAGCGTCAAACAATGTTGTAGAAGATGCAGAGAGAACTGAAGCTGTCAGATATCTTTCAAAGAAAAGTCTGAATAAGGGCAGGGCAAGCCAACTACTAGCGGCCATGGTAGGACCTCAGAATGGAAGTTCATTGGACAAGAAAAGGAAGAGAGCGGGATCTTCGCCGTGCAAAAAGGTCAGCCGTGCTGGTGGCAGCCTTAAAAACAACCACACTATGCGTCCTGTGGCAGCTGCATTACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UCH

Protein Analysis

733

Amino Acids

80.82

Weight (kDa)

5.97

Isoelectric Point (pI)

52.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UCH PF00443 134 - 439 3.2e-63 Ubiquitin carboxyl-terminal hydrolase
UCH_1 PF13423 134 - 421 9.8e-27 Ubiquitin carboxyl-terminal hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011909)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G17895 AT5G46740 AT5G46740
fragaria_vesca FvH4_5g22140
malus_domestica MD06G1034700.v1.1 MD16G1273900.v1.1
prunus_persica Prupe.5G035200_v2.0.a1
pyrus_communis pycom06g02870 pycom16g24380
rosa_chinensis RchiOBHm_Chr7g0209791
rosa_laevigata RLG00000003090
rosa_multiflora Rmu_sc0001818.1_g000007
rosa_roxburghii Rroxscaffold_3G00248970
rosa_rugosa Rorug07G0116300
rosa_samantha Rh7AG250200 Rh7BG244100 Rh7CG266100 Rh7DG255800
rosa_wichuraiana Rw7G021190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1259
AccB7I CCANNNNNTGG 1 cut(s) 136
AccBSI CCGCTC 2 cut(s) 472, 2108
AccI GTMKAC 1 cut(s) 615
AccII CGCG 1 cut(s) 1854
AciI CCGC 7 cut(s) 26, 218, 470, 819, 1871, 2054, 2108
AclI AACGTT 1 cut(s) 1694
AclWI GGATC 6 cut(s) 346, 1060, 1370, 1383, 1926, 2119
AcoI YGGCCR 2 cut(s) 98, 2055
AcsI RAATTY 4 cut(s) 268, 316, 1085, 1280
AcuI CTGAAG 3 cut(s) 567, 1052, 2013
AcyI GRCGYC 2 cut(s) 45, 1787
AdeI CACNNNGTG 1 cut(s) 466
AfaI GTAC 6 cut(s) 189, 1151, 1272, 1330, 1393, 1723
AfiI CCNNNNNNNGG 7 cut(s) 18, 64, 136, 1118, 1670, 1813, 2075
AflIII ACRYGT 2 cut(s) 950, 1078
AgeI ACCGGT 1 cut(s) 1118
AjnI CCWGG 4 cut(s) 1002, 1620, 1663, 1806
AjuI GAANNNNNNNTTGG 2 cut(s) 762, 794
AloI GAACNNNNNNTCC 2 cut(s) 1044, 1076
AluBI AGCT 8 cut(s) 203, 578, 991, 1382, 1568, 1746, 1997, 2186
AluI AGCT 8 cut(s) 203, 578, 991, 1382, 1568, 1746, 1997, 2186
Alw21I GWGCWC 2 cut(s) 550, 1430
Alw26I GTCTC 8 cut(s) 27, 794, 932, 1493, 1522, 1552, 1619, 1830
AlwI GGATC 6 cut(s) 346, 1060, 1370, 1383, 1926, 2119
AlwNI CAGNNNCTG 1 cut(s) 1637
Ama87I CYCGRG 2 cut(s) 1444, 1827
AoxI GGCC 4 cut(s) 98, 1005, 1595, 2055
ApeKI GCWGC 8 cut(s) 988, 1019, 1472, 1643, 1746, 2148, 2183, 2186
ApoI RAATTY 4 cut(s) 268, 316, 1085, 1280
AseI ATTAAT 1 cut(s) 1590
AsiGI ACCGGT 1 cut(s) 1118
Asp700I GAANNNNTTC 1 cut(s) 1284
AspA2I CCTAGG 1 cut(s) 121
AspS9I GGNCC 4 cut(s) 1006, 1221, 1595, 2066
AsuHPI GGTGA 5 cut(s) 162, 406, 1019, 1389, 1574
AsuII TTCGAA 1 cut(s) 1912
AvaI CYCGRG 2 cut(s) 1444, 1827
AvaII GGWCC 2 cut(s) 1221, 2066
AvrII CCTAGG 1 cut(s) 121
BamHI GGATCC 1 cut(s) 1375
BauI CACGAG 2 cut(s) 285, 992
BbsI GAAGAC 4 cut(s) 96, 159, 318, 476
Bbv12I GWGCWC 2 cut(s) 550, 1430
BbvI GCAGC 8 cut(s) 1000, 1006, 1459, 1630, 1733, 2160, 2173, 2195
BccI CCATC 2 cut(s) 11, 83
BceAI ACGGC 3 cut(s) 85, 2104, 2121
BcgI CGANNNNNNTGC 4 cut(s) 1114, 1142, 1148, 1176
BciT130I CCWGG 4 cut(s) 1004, 1622, 1665, 1808
BciVI GTATCC 1 cut(s) 133
BcoDI GTCTC 8 cut(s) 27, 794, 932, 1493, 1522, 1552, 1619, 1830
BfaI CTAG 7 cut(s) 122, 416, 1266, 1412, 1557, 1569, 2051
BfmI CTRYAG 1 cut(s) 1629
BfuI GTATCC 1 cut(s) 133
BglII AGATCT 2 cut(s) 707, 1796
BlnI CCTAGG 1 cut(s) 121
Bme1390I CCNGG 4 cut(s) 1004, 1622, 1665, 1808
Bme18I GGWCC 2 cut(s) 1221, 2066
BmeT110I CYCGRG 2 cut(s) 1444, 1827
BmgT120I GGNCC 4 cut(s) 1006, 1221, 1595, 2066
BmiI GGNNCC 2 cut(s) 1008, 1377
BmrFI CCNGG 4 cut(s) 1004, 1622, 1665, 1808
BmsI GCATC 7 cut(s) 495, 655, 1480, 1528, 1597, 1642, 1969
BpiI GAAGAC 4 cut(s) 96, 159, 318, 476
BpmI CTGGAG 4 cut(s) 884, 1115, 1212, 1647
Bpu10I CCTNAGC 1 cut(s) 1599
Bpu14I TTCGAA 1 cut(s) 1912
BpuEI CTTGAG 3 cut(s) 722, 996, 1240
Bsa29I ATCGAT 1 cut(s) 1134
BsaHI GRCGYC 2 cut(s) 45, 1787
BsaI GGTCTC 2 cut(s) 27, 1522
BsaJI CCNNGG 9 cut(s) 48, 121, 311, 333, 602, 890, 1334, 1620, 2058
BsaWI WCCGGW 1 cut(s) 1118
BsaXI ACNNNNNCTCC 4 cut(s) 929, 959, 1714, 1744
Bsc4I CCNNNNNNNGG 7 cut(s) 18, 64, 136, 1118, 1670, 1813, 2075
Bse118I RCCGGY 1 cut(s) 1118
Bse1I ACTGG 1 cut(s) 1642
Bse3DI GCAATG 2 cut(s) 455, 689
BseBI CCWGG 4 cut(s) 1004, 1622, 1665, 1808
BseCI ATCGAT 1 cut(s) 1134
BseDI CCNNGG 9 cut(s) 48, 121, 311, 333, 602, 890, 1334, 1620, 2058
BseGI GGATG 1 cut(s) 1255
BseLI CCNNNNNNNGG 7 cut(s) 18, 64, 136, 1118, 1670, 1813, 2075
BseMI GCAATG 2 cut(s) 455, 689
BseMII CTCAG 3 cut(s) 848, 1698, 2084
BseNI ACTGG 1 cut(s) 1642
BseXI GCAGC 8 cut(s) 1000, 1006, 1459, 1630, 1733, 2160, 2173, 2195
BsgI GTGCAG 1 cut(s) 420
Bsh1236I CGCG 1 cut(s) 1854
BshFI GGCC 4 cut(s) 100, 1007, 1597, 2057
BshTI ACCGGT 1 cut(s) 1118
BshVI ATCGAT 1 cut(s) 1134
BsiHKAI GWGCWC 2 cut(s) 550, 1430
BsiHKCI CYCGRG 2 cut(s) 1444, 1827
BsiSI CCGG 1 cut(s) 1119
BslI CCNNNNNNNGG 7 cut(s) 18, 64, 136, 1118, 1670, 1813, 2075
BsmAI GTCTC 8 cut(s) 27, 794, 932, 1493, 1522, 1552, 1619, 1830
BsmBI CGTCTC 2 cut(s) 794, 1493
BsmI GAATGC 1 cut(s) 442
BsnI GGCC 4 cut(s) 100, 1007, 1597, 2057
Bso31I GGTCTC 2 cut(s) 27, 1522
BsoBI CYCGRG 2 cut(s) 1444, 1827
Bsp119I TTCGAA 1 cut(s) 1912
Bsp1286I GDGCHC 2 cut(s) 550, 1430
Bsp19I CCATGG 4 cut(s) 48, 602, 1334, 2058
BspACI CCGC 7 cut(s) 26, 218, 470, 819, 1871, 2054, 2108
BspANI GGCC 4 cut(s) 100, 1007, 1597, 2057
BspCNI CTCAG 3 cut(s) 849, 1699, 2083
BspDI ATCGAT 1 cut(s) 1134
BspFNI CGCG 1 cut(s) 1854
BspLI GGNNCC 2 cut(s) 1008, 1377
BspPI GGATC 6 cut(s) 346, 1060, 1370, 1383, 1926, 2119
BspQI GCTCTTC 1 cut(s) 555
BspT104I TTCGAA 1 cut(s) 1912
BspTNI GGTCTC 2 cut(s) 27, 1522
BsrBI CCGCTC 2 cut(s) 472, 2108
BsrDI GCAATG 2 cut(s) 455, 689
BsrFI RCCGGY 1 cut(s) 1118
BsrI ACTGG 1 cut(s) 1642
BssAI RCCGGY 1 cut(s) 1118
BssECI CCNNGG 9 cut(s) 48, 121, 311, 333, 602, 890, 1334, 1620, 2058
BssNI GRCGYC 2 cut(s) 45, 1787
BssSI CACGAG 2 cut(s) 285, 992
BssT1I CCWWGG 7 cut(s) 48, 121, 333, 602, 890, 1334, 2058
Bst2BI CACGAG 2 cut(s) 285, 992
Bst2UI CCWGG 4 cut(s) 1004, 1622, 1665, 1808
Bst4CI ACNGT 3 cut(s) 363, 466, 1504
Bst6I CTCTTC 5 cut(s) 555, 583, 891, 1028, 2096
BstACI GRCGYC 2 cut(s) 45, 1787
BstAPI GCANNNNNTGC 3 cut(s) 407, 466, 1940
BstBI TTCGAA 1 cut(s) 1912
BstC8I GCNNGC 2 cut(s) 408, 2041
BstDEI CTNAG 6 cut(s) 857, 912, 1401, 1599, 1707, 2070
BstDSI CCRYGG 5 cut(s) 48, 311, 602, 1334, 2058
BstF5I GGATG 1 cut(s) 1255
BstFNI CGCG 1 cut(s) 1854
BstMAI GTCTC 8 cut(s) 27, 794, 932, 1493, 1522, 1552, 1619, 1830
BstMWI GCNNNNNNNGC 6 cut(s) 34, 407, 466, 1652, 1940, 2040
BstNI CCWGG 4 cut(s) 1004, 1622, 1665, 1808
BstNSI RCATGY 3 cut(s) 954, 1082, 1178
BstSCI CCNGG 4 cut(s) 1002, 1620, 1663, 1806
BstSFI CTRYAG 1 cut(s) 1629
BstUI CGCG 1 cut(s) 1854
BstV1I GCAGC 8 cut(s) 1000, 1006, 1459, 1630, 1733, 2160, 2173, 2195
BstV2I GAAGAC 4 cut(s) 96, 159, 318, 476
BstX2I RGATCY 5 cut(s) 707, 1052, 1375, 1796, 2111
BstXI CCANNNNNNTGG 1 cut(s) 1236
BstYI RGATCY 5 cut(s) 707, 1052, 1375, 1796, 2111
Bsu15I ATCGAT 1 cut(s) 1134
BsuI GTATCC 1 cut(s) 133
BsuRI GGCC 4 cut(s) 100, 1007, 1597, 2057
BsuTUI ATCGAT 1 cut(s) 1134
BtgI CCRYGG 5 cut(s) 48, 311, 602, 1334, 2058
BtsCI GGATG 1 cut(s) 1255
BtsI GCAGTG 1 cut(s) 1132
BtsIMutI CAGTG 4 cut(s) 462, 984, 1132, 1704
Cac8I GCNNGC 2 cut(s) 408, 2041
CaiI CAGNNNCTG 1 cut(s) 1637
Cfr10I RCCGGY 1 cut(s) 1118
Cfr13I GGNCC 4 cut(s) 1006, 1221, 1595, 2066
ClaI ATCGAT 1 cut(s) 1134
CseI GACGC 4 cut(s) 53, 1795, 1947, 2162
Csp6I GTAC 6 cut(s) 188, 1150, 1271, 1329, 1392, 1722
CspAI ACCGGT 1 cut(s) 1118
CviQI GTAC 6 cut(s) 188, 1150, 1271, 1329, 1392, 1722
DdeI CTNAG 6 cut(s) 857, 912, 1401, 1599, 1707, 2070
DraIII CACNNNGTG 1 cut(s) 466
DrdI GACNNNNNNGTC 1 cut(s) 1259
DseDI GACNNNNNNGTC 1 cut(s) 1259
EaeI YGGCCR 2 cut(s) 98, 2055
Eam1104I CTCTTC 5 cut(s) 555, 583, 891, 1028, 2096
EarI CTCTTC 5 cut(s) 555, 583, 891, 1028, 2096
EciI GGCGGA 1 cut(s) 15
Eco130I CCWWGG 7 cut(s) 48, 121, 333, 602, 890, 1334, 2058
Eco31I GGTCTC 2 cut(s) 27, 1522
Eco32I GATATC 1 cut(s) 2006
Eco47I GGWCC 2 cut(s) 1221, 2066
Eco57I CTGAAG 3 cut(s) 567, 1052, 2013
Eco88I CYCGRG 2 cut(s) 1444, 1827
EcoO109I RGGNCCY 2 cut(s) 1006, 2066
EcoRI GAATTC 2 cut(s) 268, 316
EcoRII CCWGG 4 cut(s) 1002, 1620, 1663, 1806
EcoRV GATATC 1 cut(s) 2006
EcoT14I CCWWGG 7 cut(s) 48, 121, 333, 602, 890, 1334, 2058
ErhI CCWWGG 7 cut(s) 48, 121, 333, 602, 890, 1334, 2058
Esp3I CGTCTC 2 cut(s) 794, 1493
FalI AAGNNNNNCTT 2 cut(s) 1355, 1387
FauI CCCGC 1 cut(s) 2101
FauNDI CATATG 1 cut(s) 838
FblI GTMKAC 1 cut(s) 615
FokI GGATG 1 cut(s) 1262
FspBI CTAG 7 cut(s) 122, 416, 1266, 1412, 1557, 1569, 2051
GsuI CTGGAG 4 cut(s) 884, 1115, 1212, 1647
HaeIII GGCC 4 cut(s) 100, 1007, 1597, 2057
HapII CCGG 1 cut(s) 1119
HgaI GACGC 4 cut(s) 53, 1795, 1947, 2162
Hin1I GRCGYC 2 cut(s) 45, 1787
HincII GTYRAC 2 cut(s) 616, 1000
HindII GTYRAC 2 cut(s) 616, 1000
HpaII CCGG 1 cut(s) 1119
HphI GGTGA 5 cut(s) 162, 406, 1019, 1389, 1574
Hpy166II GTNNAC 4 cut(s) 616, 948, 1000, 1574
Hpy188III TCNNGA 9 cut(s) 285, 554, 585, 863, 1094, 1229, 1412, 1827, 1829
Hpy8I GTNNAC 4 cut(s) 616, 948, 1000, 1574
HpyAV CCTTC 4 cut(s) 219, 231, 916, 1318
HpyCH4III ACNGT 3 cut(s) 363, 466, 1504
HpyCH4IV ACGT 1 cut(s) 1694
HpyF10VI GCNNNNNNNGC 6 cut(s) 34, 407, 466, 1652, 1940, 2040
HpyF3I CTNAG 6 cut(s) 857, 912, 1401, 1599, 1707, 2070
HpySE526I ACGT 1 cut(s) 1694
Hsp92I GRCGYC 2 cut(s) 45, 1787
LguI GCTCTTC 1 cut(s) 555
LmnI GCTCC 1 cut(s) 1171
Lsp1109I GCAGC 8 cut(s) 1000, 1006, 1459, 1630, 1733, 2160, 2173, 2195
LweI GCATC 7 cut(s) 495, 655, 1480, 1528, 1597, 1642, 1969
MaeI CTAG 7 cut(s) 122, 416, 1266, 1412, 1557, 1569, 2051
MaeII ACGT 1 cut(s) 1694
MaeIII GTNAC 6 cut(s) 419, 554, 1127, 1261, 1504, 1879
MbiI CCGCTC 2 cut(s) 472, 2108
MfeI CAATTG 2 cut(s) 814, 1164
MflI RGATCY 5 cut(s) 707, 1052, 1375, 1796, 2111
MhlI GDGCHC 2 cut(s) 550, 1430
MlyI GAGTC 5 cut(s) 868, 911, 926, 1247, 1832
MmeI TCCRAC 3 cut(s) 1080, 1227, 1801
MroXI GAANNNNTTC 1 cut(s) 1284
MseI TTAA 3 cut(s) 1041, 1590, 2154
MslI CAYNNNNRTG 1 cut(s) 1136
MspA1I CMGCKG 3 cut(s) 1382, 1871, 2186
MspI CCGG 1 cut(s) 1119
MspR9I CCNGG 4 cut(s) 1004, 1622, 1665, 1808
MunI CAATTG 2 cut(s) 814, 1164
Mva1269I GAATGC 1 cut(s) 442
MvaI CCWGG 4 cut(s) 1004, 1622, 1665, 1808
MvnI CGCG 1 cut(s) 1854
MwoI GCNNNNNNNGC 6 cut(s) 34, 407, 466, 1652, 1940, 2040
NcoI CCATGG 4 cut(s) 48, 602, 1334, 2058
NdeI CATATG 1 cut(s) 838
NlaIV GGNNCC 2 cut(s) 1008, 1377
NmuCI GTSAC 4 cut(s) 554, 1127, 1261, 1879
NspI RCATGY 3 cut(s) 954, 1082, 1178
NspV TTCGAA 1 cut(s) 1912
PaeR7I CTCGAG 1 cut(s) 1827
PciI ACATGT 2 cut(s) 950, 1078
PciSI GCTCTTC 1 cut(s) 555
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PctI GAATGC 1 cut(s) 442
PdmI GAANNNNTTC 1 cut(s) 1284
PfeI GAWTC 5 cut(s) 278, 356, 442, 531, 625
PflMI CCANNNNNTGG 1 cut(s) 136
PinAI ACCGGT 1 cut(s) 1118
PleI GAGTC 5 cut(s) 867, 910, 926, 1247, 1831
PpsI GAGTC 5 cut(s) 867, 910, 926, 1247, 1831
PpuMI RGGWCCY 1 cut(s) 2066
PscI ACATGT 2 cut(s) 950, 1078
PshBI ATTAAT 1 cut(s) 1590
Psp1406I AACGTT 1 cut(s) 1694
Psp5II RGGWCCY 1 cut(s) 2066
Psp6I CCWGG 4 cut(s) 1002, 1620, 1663, 1806
PspGI CCWGG 4 cut(s) 1002, 1620, 1663, 1806
PspN4I GGNNCC 2 cut(s) 1008, 1377
PspPI GGNCC 4 cut(s) 1006, 1221, 1595, 2066
PspPPI RGGWCCY 1 cut(s) 2066
PstNI CAGNNNCTG 1 cut(s) 1637
PsuI RGATCY 5 cut(s) 707, 1052, 1375, 1796, 2111
PvuII CAGCTG 2 cut(s) 1382, 2186
RsaI GTAC 6 cut(s) 189, 1151, 1272, 1330, 1393, 1723
RsaNI GTAC 6 cut(s) 188, 1150, 1271, 1329, 1392, 1722
RseI CAYNNNNRTG 1 cut(s) 1136
SalI GTCGAC 1 cut(s) 614
SapI GCTCTTC 1 cut(s) 555
SaqAI TTAA 3 cut(s) 1041, 1590, 2154
Sau96I GGNCC 4 cut(s) 1006, 1221, 1595, 2066
SchI GAGTC 5 cut(s) 868, 911, 926, 1247, 1832
ScrFI CCNGG 4 cut(s) 1004, 1622, 1665, 1808
SduI GDGCHC 2 cut(s) 550, 1430
SfaNI GCATC 7 cut(s) 495, 655, 1480, 1528, 1597, 1642, 1969
SfcI CTRYAG 1 cut(s) 1629
Sfr274I CTCGAG 1 cut(s) 1827
SfuI TTCGAA 1 cut(s) 1912
SgrAI CRCCGGYG 1 cut(s) 1118
SinI GGWCC 2 cut(s) 1221, 2066
SlaI CTCGAG 1 cut(s) 1827
SmiMI CAYNNNNRTG 1 cut(s) 1136
SmlI CTYRAG 4 cut(s) 701, 1011, 1255, 1827
SmoI CTYRAG 4 cut(s) 701, 1011, 1255, 1827
SsiI CCGC 7 cut(s) 26, 218, 470, 819, 1871, 2054, 2108
SspMI CTAG 7 cut(s) 122, 416, 1266, 1412, 1557, 1569, 2051
StyD4I CCNGG 4 cut(s) 1002, 1620, 1663, 1806
StyI CCWWGG 7 cut(s) 48, 121, 333, 602, 890, 1334, 2058
TaaI ACNGT 3 cut(s) 363, 466, 1504
TaiI ACGT 1 cut(s) 1697
TaqI TCGA 6 cut(s) 15, 503, 615, 1134, 1828, 1912
TaqII GACCGA 1 cut(s) 1209
TatI WGTACW 2 cut(s) 1391, 1721
TauI GCSGC 2 cut(s) 472, 2057
TfiI GAWTC 5 cut(s) 278, 356, 442, 531, 625
Tru1I TTAA 3 cut(s) 1041, 1590, 2154
Tru9I TTAA 3 cut(s) 1041, 1590, 2154
TscAI CASTG 4 cut(s) 469, 984, 1132, 1711
TseFI GTSAC 4 cut(s) 554, 1127, 1261, 1879
TseI GCWGC 8 cut(s) 988, 1019, 1472, 1643, 1746, 2148, 2183, 2186
Tsp45I GTSAC 4 cut(s) 554, 1127, 1261, 1879
TspGWI ACGGA 2 cut(s) 300, 1065
TspRI CASTG 4 cut(s) 469, 984, 1132, 1711
Van91I CCANNNNNTGG 1 cut(s) 136
VpaK11BI GGWCC 2 cut(s) 1221, 2066
VspI ATTAAT 1 cut(s) 1590
XapI RAATTY 4 cut(s) 268, 316, 1085, 1280
XbaI TCTAGA 1 cut(s) 1411
XceI RCATGY 3 cut(s) 954, 1082, 1178
XcmI CCANNNNNNNNNTGG 1 cut(s) 388
XhoI CTCGAG 1 cut(s) 1827
XmaJI CCTAGG 1 cut(s) 121
XmiI GTMKAC 1 cut(s) 615
XmnI GAANNNNTTC 1 cut(s) 1284
XspI CTAG 7 cut(s) 122, 416, 1266, 1412, 1557, 1569, 2051
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.