Rroxscaffold_3G00248970

Belongs to the peptidase C19 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0011909
Physical Location & Seq
Reverse (-)
42461347 .. 42465813
4467 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00248970.1

Sequence Viewer

Length: 1884 bp
ATGGAAACCCATCTCTCTGAAACCAACTCTCTGCCCCCAGATTCATTTCTCCCAAATCCCCAACACCAAACCTCTTCTTCCCCAGATTCAATGCCTATTCTTGCAGAAACCCTTGATGGGTCTTCACCATTTTCACAACCTGAAGCCCTGGACGCCCAAAATCGAAATGGGTCCAAGACCCAAGATGAGGTTTCTGTTCTTGCAGAAACCCTTGATGGGTCTTCACCGTCTTCACAAACTGAAGACGTCTACGAGTTGGATTTGGTCCCTGTTCTTGAAACTGAAAATGGGTCTTCGTCCTCTTCGCCTCTCGAAACCCTAGGGTTTCAATCTTCGGATCCTGAGTCTCAAGGTTTACAACAAGAGCAAGAAGGTGACCCCACATCAGCCACTCCTCCCAATGATAATAATGTATTGAATTCAGAGTCGAATTCGCATTCGGAGTCTTGGTGTCGGTGGCCTTCATCGGATTCTAGCAAGCAATCAGTGGTTTACGCAGAGCTGTATCCGATCGAGGAATCCAAGATCTCTATGGTGGGTGCAGGGCTTTATAATCTTGGCAATACGTGCTTTATCAATGCGATTCTGCAATGCTTTACGCATACTGTGCCCCTCGTGGAGGGTCTCCGTTCTTCCAATCATCCCTTGCCTTGTGATTGTGGTAGTGAAGGGTTCTGCGTTCTTTGTGCTCTTCGTGAACACATTGATCTTTCAATAGTATCTTCGGGAGGGGCTCTTTCACCATCGAAACTTGTTGATAATTTGAACCATTTCTCATCTTATTTCCGAAGATACCAGCAAGAAGATGCCCATGAGTTCTTGCAATGTTTTTTAGATAAACTAGAGAGATCTTGGTTGGATTCTGATAAAAAGAATGAGACTTCATCTTGCAAAGATAAAAACCTTGTGAACAGGGTGTTTGGTGGCAGTCTCATTAGCAAACTCCGATGTTGTAGCTGTGGTCACTGTTCTGACACTCGTGAACCTCTGATTGATCTATGTTTGGAAATTGAAGATGCTGACTCTCTTCCGAGGGCCTTGGAATCCTTCACTAAGATAGAAAAGATAAATGATGTGGAGACAAAGTTTATGTGCGAGAATTGCAAGGAAGAAGTGTCGGTGGAGAAGCAGCTTGTGGTGGATGAGGCCCCTCCAGTTGCTGCATTTCATTTAAAGAGATTTAAAACTGATGGAAATTATGTTGAGAAGATTGATAAGCATGTGGAATTTCCTTTGGAGTTGGACTTGAAACCCTACACCAGTGGCAATAACAGTGATGTGGAATTGAAGTATGAGCTTTATGCAATTGTGGAGCATATTGGCTTTTCATCCACTTCTGGGCATTACTTCTGCTTTATTCGATCCTCTCCAGATACATGGCATAGGTTGGATGACTCAAAGGTCACTAGGGTTCGAGAAGAATTTGTTCTATCACAGGAGGCATACATTCTGTTCTATGCCAGGCAGGGTACTCCCTGGTTTTCAAGTTTAATGGAAGGACAGATGTCATGCTCAGATCTACCCATTATGAATACATCACCTAAGTCTGTGCTAGATAATGTTGAGAACATCTGTACTGTGAATAGTCCTGAGGGTTGTACTCCCAATGCACCCAGAGATGTTGGCCAGAAAATTTCTACTTTCTTCTGCAGAGCAAAACGTGAAGAGGTCTTGTTTACTGACACCAGAGATGACGCTGATAGACTTTCTGAAAAGATTGATGGATCCAAGCATGATGCTGGAGGTTTCAAGGAGACTGATGAGAGTATGCCTATGATTACTGCTTCAACTTCAGTTGGCACAAGTAAATGTTTAGCTGGAACTTCACACAACAATGAGAATAATGAGAATATATGCAGTACATCCTCGCTTGCTTGGTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UCH

Protein Analysis

627

Amino Acids

69.5

Weight (kDa)

4.6

Isoelectric Point (pI)

57.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UCH PF00443 181 - 486 9.6e-62 Ubiquitin carboxyl-terminal hydrolase
UCH_1 PF13423 181 - 468 3.8e-24 Ubiquitin carboxyl-terminal hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011909)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G17895 AT5G46740 AT5G46740
fragaria_vesca FvH4_5g22140
malus_domestica MD06G1034700.v1.1 MD16G1273900.v1.1
prunus_persica Prupe.5G035200_v2.0.a1
pyrus_communis pycom06g02870 pycom16g24380
rosa_chinensis RchiOBHm_Chr7g0209791
rosa_laevigata RLG00000003090
rosa_multiflora Rmu_sc0001818.1_g000007
rosa_roxburghii Rroxscaffold_3G00248970
rosa_rugosa Rorug07G0116300
rosa_samantha Rh7AG250200 Rh7BG244100 Rh7CG266100 Rh7DG255800
rosa_wichuraiana Rw7G021190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 552
AasI GACNNNNNNGTC 1 cut(s) 1400
AatII GACGTC 1 cut(s) 249
AccI GTMKAC 1 cut(s) 249
AclWI GGATC 5 cut(s) 332, 345, 1356, 1719, 1732
AcoI YGGCCR 1 cut(s) 1624
AcsI RAATTY 5 cut(s) 418, 430, 1226, 1421, 1632
AcuI CTGAAG 3 cut(s) 162, 261, 1776
AcyI GRCGYC 2 cut(s) 153, 246
AfaI GTAC 4 cut(s) 1471, 1576, 1600, 1861
AfiI CCNNNNNNNGG 5 cut(s) 117, 187, 216, 619, 1338
AjnI CCWGG 3 cut(s) 147, 1460, 1475
AluBI AGCT 5 cut(s) 502, 957, 1132, 1297, 1817
AluI AGCT 5 cut(s) 502, 957, 1132, 1297, 1817
Alw21I GWGCWC 1 cut(s) 691
Alw26I GTCTC 6 cut(s) 351, 629, 872, 935, 1073, 1748
AlwI GGATC 5 cut(s) 332, 345, 1356, 1719, 1732
AlwNI CAGNNNCTG 1 cut(s) 1160
AoxI GGCC 4 cut(s) 458, 1035, 1146, 1624
ApeKI GCWGC 2 cut(s) 1129, 1160
ApoI RAATTY 5 cut(s) 418, 430, 1226, 1421, 1632
Asp700I GAANNNNTTC 2 cut(s) 770, 1425
AspA2I CCTAGG 1 cut(s) 319
AspS9I GGNCC 4 cut(s) 171, 265, 1035, 1147
AsuHPI GGTGA 5 cut(s) 117, 216, 386, 732, 1530
AvaII GGWCC 2 cut(s) 171, 265
AvrII CCTAGG 1 cut(s) 319
AxyI CCTNAGG 1 cut(s) 1590
BaeGI GKGCMC 1 cut(s) 612
BalI TGGCCA 1 cut(s) 1626
BamHI GGATCC 2 cut(s) 337, 1724
BanII GRGCYC 1 cut(s) 736
BauI CACGAG 2 cut(s) 614, 978
BbsI GAAGAC 5 cut(s) 114, 213, 222, 249, 285
Bbv12I GWGCWC 1 cut(s) 691
BbvI GCAGC 2 cut(s) 1141, 1147
BccI CCATC 6 cut(s) 18, 110, 209, 751, 1184, 1715
BciT130I CCWGG 3 cut(s) 149, 1462, 1477
BciVI GTATCC 1 cut(s) 516
BcoDI GTCTC 6 cut(s) 351, 629, 872, 935, 1073, 1748
BfaI CTAG 5 cut(s) 320, 474, 842, 1407, 1553
BfmI CTRYAG 1 cut(s) 1648
BfuI GTATCC 1 cut(s) 516
BglII AGATCT 3 cut(s) 525, 848, 1516
BisI GCNGC 2 cut(s) 1130, 1161
BlnI CCTAGG 1 cut(s) 319
BlsI GCNGC 2 cut(s) 1131, 1162
Bme1390I CCNGG 3 cut(s) 149, 1462, 1477
Bme18I GGWCC 2 cut(s) 171, 265
BmgT120I GGNCC 4 cut(s) 171, 265, 1035, 1147
BmiI GGNNCC 5 cut(s) 172, 267, 339, 1149, 1726
BmrFI CCNGG 3 cut(s) 149, 1462, 1477
BmsI GCATC 3 cut(s) 796, 1006, 1726
BoxI GACNNNNGTC 1 cut(s) 1504
BpiI GAAGAC 5 cut(s) 114, 213, 222, 249, 285
BpmI CTGGAG 3 cut(s) 1137, 1353, 1761
BpuEI CTTGAG 1 cut(s) 333
BsaAI YACGTR 1 cut(s) 567
BsaHI GRCGYC 2 cut(s) 153, 246
BsaI GGTCTC 1 cut(s) 629
BsaJI CCNNGG 5 cut(s) 147, 319, 1031, 1038, 1475
BsaXI ACNNNNNCTCC 4 cut(s) 434, 464, 1070, 1100
Bsc4I CCNNNNNNNGG 5 cut(s) 117, 187, 216, 619, 1338
Bse1I ACTGG 2 cut(s) 1154, 1260
Bse21I CCTNAGG 1 cut(s) 1590
Bse3DI GCAATG 2 cut(s) 596, 830
BseBI CCWGG 3 cut(s) 149, 1462, 1477
BseDI CCNNGG 5 cut(s) 147, 319, 1031, 1038, 1475
BseGI GGATG 5 cut(s) 640, 1147, 1328, 1396, 1862
BseLI CCNNNNNNNGG 5 cut(s) 117, 187, 216, 619, 1338
BseMI GCAATG 2 cut(s) 596, 830
BseMII CTCAG 3 cut(s) 333, 1527, 1581
BseNI ACTGG 2 cut(s) 1154, 1260
BseRI GAGGAG 1 cut(s) 384
BseSI GKGCMC 1 cut(s) 612
BseXI GCAGC 2 cut(s) 1141, 1147
BsgI GTGCAG 1 cut(s) 561
Bsh1285I CGRYCG 1 cut(s) 513
BshFI GGCC 4 cut(s) 460, 1037, 1148, 1626
BsiEI CGRYCG 1 cut(s) 513
BsiHKAI GWGCWC 1 cut(s) 691
BslFI GGGAC 1 cut(s) 251
BslI CCNNNNNNNGG 5 cut(s) 117, 187, 216, 619, 1338
BsmAI GTCTC 6 cut(s) 351, 629, 872, 935, 1073, 1748
BsmFI GGGAC 1 cut(s) 251
BsmI GAATGC 1 cut(s) 436
BsnI GGCC 4 cut(s) 460, 1037, 1148, 1626
Bso31I GGTCTC 1 cut(s) 629
Bsp1286I GDGCHC 3 cut(s) 612, 691, 736
Bsp143I GATC 9 cut(s) 337, 510, 525, 706, 848, 994, 1361, 1516, 1724
BspANI GGCC 4 cut(s) 460, 1037, 1148, 1626
BspCNI CTCAG 3 cut(s) 334, 1526, 1582
BspLI GGNNCC 5 cut(s) 172, 267, 339, 1149, 1726
BspMAI CTGCAG 1 cut(s) 1652
BspPI GGATC 5 cut(s) 332, 345, 1356, 1719, 1732
BspQI GCTCTTC 1 cut(s) 696
BspTNI GGTCTC 1 cut(s) 629
BsrDI GCAATG 2 cut(s) 596, 830
BsrI ACTGG 2 cut(s) 1154, 1260
BssECI CCNNGG 5 cut(s) 147, 319, 1031, 1038, 1475
BssMI GATC 9 cut(s) 337, 510, 525, 706, 848, 994, 1361, 1516, 1724
BssNI GRCGYC 2 cut(s) 153, 246
BssSI CACGAG 2 cut(s) 614, 978
BssT1I CCWWGG 2 cut(s) 319, 1038
Bst2BI CACGAG 2 cut(s) 614, 978
Bst2UI CCWGG 3 cut(s) 149, 1462, 1477
Bst4CI ACNGT 5 cut(s) 228, 607, 968, 1274, 1579
Bst6I CTCTTC 5 cut(s) 79, 307, 696, 1032, 1659
BstACI GRCGYC 2 cut(s) 153, 246
BstAPI GCANNNNNTGC 2 cut(s) 567, 607
BstBAI YACGTR 1 cut(s) 567
BstC8I GCNNGC 2 cut(s) 479, 1872
BstDEI CTNAG 5 cut(s) 342, 1053, 1513, 1542, 1590
BstEII GGTNACC 1 cut(s) 374
BstENI CCTNNNNNAGG 1 cut(s) 617
BstF5I GGATG 5 cut(s) 640, 1147, 1328, 1396, 1862
BstKTI GATC 9 cut(s) 340, 513, 528, 709, 851, 997, 1364, 1519, 1727
BstMAI GTCTC 6 cut(s) 351, 629, 872, 935, 1073, 1748
BstMBI GATC 9 cut(s) 337, 510, 525, 706, 848, 994, 1361, 1516, 1724
BstMCI CGRYCG 1 cut(s) 513
BstMWI GCNNNNNNNGC 4 cut(s) 152, 567, 607, 1101
BstNI CCWGG 3 cut(s) 149, 1462, 1477
BstNSI RCATGY 1 cut(s) 1223
BstPAI GACNNNNGTC 1 cut(s) 1504
BstPI GGTNACC 1 cut(s) 374
BstSCI CCNGG 3 cut(s) 147, 1460, 1475
BstSFI CTRYAG 1 cut(s) 1648
BstSLI GKGCMC 1 cut(s) 612
BstV1I GCAGC 2 cut(s) 1141, 1147
BstV2I GAAGAC 5 cut(s) 114, 213, 222, 249, 285
BstX2I RGATCY 5 cut(s) 337, 525, 848, 1516, 1724
BstXI CCANNNNNNTGG 1 cut(s) 1377
BstYI RGATCY 5 cut(s) 337, 525, 848, 1516, 1724
Bsu36I CCTNAGG 1 cut(s) 1590
BsuI GTATCC 1 cut(s) 516
BsuRI GGCC 4 cut(s) 460, 1037, 1148, 1626
BtsCI GGATG 5 cut(s) 640, 1147, 1328, 1396, 1862
BtsIMutI CAGTG 4 cut(s) 492, 964, 1267, 1279
Cac8I GCNNGC 2 cut(s) 479, 1872
CaiI CAGNNNCTG 1 cut(s) 1160
Cfr13I GGNCC 4 cut(s) 171, 265, 1035, 1147
CseI GACGC 2 cut(s) 161, 1703
Csp6I GTAC 4 cut(s) 1470, 1575, 1599, 1860
CviAII CATG 5 cut(s) 812, 1220, 1377, 1509, 1733
CviQI GTAC 4 cut(s) 1470, 1575, 1599, 1860
DdeI CTNAG 5 cut(s) 342, 1053, 1513, 1542, 1590
DpnI GATC 9 cut(s) 339, 512, 527, 708, 850, 996, 1363, 1518, 1726
DpnII GATC 9 cut(s) 337, 510, 525, 706, 848, 994, 1361, 1516, 1724
DraI TTTAAA 2 cut(s) 1173, 1183
DrdI GACNNNNNNGTC 1 cut(s) 1400
DseDI GACNNNNNNGTC 1 cut(s) 1400
EaeI YGGCCR 1 cut(s) 1624
Eam1104I CTCTTC 5 cut(s) 79, 307, 696, 1032, 1659
EarI CTCTTC 5 cut(s) 79, 307, 696, 1032, 1659
Eco130I CCWWGG 2 cut(s) 319, 1038
Eco24I GRGCYC 1 cut(s) 736
Eco31I GGTCTC 1 cut(s) 629
Eco47I GGWCC 2 cut(s) 171, 265
Eco57I CTGAAG 3 cut(s) 162, 261, 1776
Eco81I CCTNAGG 1 cut(s) 1590
Eco91I GGTNACC 1 cut(s) 374
EcoNI CCTNNNNNAGG 1 cut(s) 617
EcoO109I RGGNCCY 2 cut(s) 1035, 1147
EcoO65I GGTNACC 1 cut(s) 374
EcoRI GAATTC 2 cut(s) 418, 430
EcoRII CCWGG 3 cut(s) 147, 1460, 1475
EcoT14I CCWWGG 2 cut(s) 319, 1038
EcoT38I GRGCYC 1 cut(s) 736
ErhI CCWWGG 2 cut(s) 319, 1038
FaeI CATG 5 cut(s) 815, 1223, 1380, 1512, 1736
FaqI GGGAC 1 cut(s) 251
FatI CATG 5 cut(s) 811, 1219, 1376, 1508, 1732
FblI GTMKAC 1 cut(s) 249
Fnu4HI GCNGC 2 cut(s) 1130, 1161
FokI GGATG 5 cut(s) 627, 1154, 1315, 1403, 1849
FriOI GRGCYC 1 cut(s) 736
Fsp4HI GCNGC 2 cut(s) 1130, 1161
FspBI CTAG 5 cut(s) 320, 474, 842, 1407, 1553
GluI GCNGC 2 cut(s) 1130, 1161
GsuI CTGGAG 3 cut(s) 1137, 1353, 1761
HaeIII GGCC 4 cut(s) 460, 1037, 1148, 1626
HgaI GACGC 2 cut(s) 161, 1703
Hin1I GRCGYC 2 cut(s) 153, 246
Hin1II CATG 5 cut(s) 815, 1223, 1380, 1512, 1736
HphI GGTGA 5 cut(s) 117, 216, 386, 732, 1530
Hpy166II GTNNAC 7 cut(s) 250, 356, 493, 698, 910, 983, 1677
Hpy188III TCNNGA 9 cut(s) 275, 311, 341, 695, 726, 980, 1370, 1415, 1589
Hpy8I GTNNAC 7 cut(s) 250, 356, 493, 698, 910, 983, 1677
HpyAV CCTTC 5 cut(s) 365, 471, 662, 1057, 1490
HpyCH4III ACNGT 5 cut(s) 228, 607, 968, 1274, 1579
HpyCH4IV ACGT 3 cut(s) 246, 566, 1660
HpyF10VI GCNNNNNNNGC 4 cut(s) 152, 567, 607, 1101
HpyF3I CTNAG 5 cut(s) 342, 1053, 1513, 1542, 1590
HpySE526I ACGT 3 cut(s) 246, 566, 1660
Hsp92I GRCGYC 2 cut(s) 153, 246
Hsp92II CATG 5 cut(s) 815, 1223, 1380, 1512, 1736
Kzo9I GATC 9 cut(s) 337, 510, 525, 706, 848, 994, 1361, 1516, 1724
LguI GCTCTTC 1 cut(s) 696
LmnI GCTCC 1 cut(s) 1312
Lsp1109I GCAGC 2 cut(s) 1141, 1147
LweI GCATC 3 cut(s) 796, 1006, 1726
MaeI CTAG 5 cut(s) 320, 474, 842, 1407, 1553
MaeII ACGT 3 cut(s) 246, 566, 1660
MaeIII GTNAC 3 cut(s) 374, 962, 1402
MalI GATC 9 cut(s) 339, 512, 527, 708, 850, 996, 1363, 1518, 1726
MboI GATC 9 cut(s) 337, 510, 525, 706, 848, 994, 1361, 1516, 1724
MfeI CAATTG 1 cut(s) 1305
MflI RGATCY 5 cut(s) 337, 525, 848, 1516, 1724
MhlI GDGCHC 3 cut(s) 612, 691, 736
MlsI TGGCCA 1 cut(s) 1626
MluNI TGGCCA 1 cut(s) 1626
MlyI GAGTC 5 cut(s) 353, 434, 452, 1016, 1388
MmeI TCCRAC 4 cut(s) 237, 837, 1221, 1368
Mox20I TGGCCA 1 cut(s) 1626
MroXI GAANNNNTTC 2 cut(s) 770, 1425
MscI TGGCCA 1 cut(s) 1626
MseI TTAA 3 cut(s) 1172, 1182, 1490
MslI CAYNNNNRTG 1 cut(s) 1833
Msp20I TGGCCA 1 cut(s) 1626
MspR9I CCNGG 3 cut(s) 149, 1462, 1477
MunI CAATTG 1 cut(s) 1305
Mva1269I GAATGC 1 cut(s) 436
MvaI CCWGG 3 cut(s) 149, 1462, 1477
MwoI GCNNNNNNNGC 4 cut(s) 152, 567, 607, 1101
NdeII GATC 9 cut(s) 337, 510, 525, 706, 848, 994, 1361, 1516, 1724
NlaIII CATG 5 cut(s) 815, 1223, 1380, 1512, 1736
NlaIV GGNNCC 5 cut(s) 172, 267, 339, 1149, 1726
NmuCI GTSAC 3 cut(s) 374, 962, 1402
NspI RCATGY 1 cut(s) 1223
PciSI GCTCTTC 1 cut(s) 696
PctI GAATGC 1 cut(s) 436
PdmI GAANNNNTTC 2 cut(s) 770, 1425
PfeI GAWTC 7 cut(s) 41, 86, 470, 518, 583, 860, 1043
PkrI GCNGC 2 cut(s) 1131, 1162
Ple19I CGATCG 1 cut(s) 513
PleI GAGTC 5 cut(s) 352, 433, 451, 1016, 1388
PpsI GAGTC 5 cut(s) 352, 433, 451, 1016, 1388
Ppu21I YACGTR 1 cut(s) 567
PshAI GACNNNNGTC 1 cut(s) 1504
PsiI TTATAA 1 cut(s) 552
Psp6I CCWGG 3 cut(s) 147, 1460, 1475
PspEI GGTNACC 1 cut(s) 374
PspGI CCWGG 3 cut(s) 147, 1460, 1475
PspN4I GGNNCC 5 cut(s) 172, 267, 339, 1149, 1726
PspPI GGNCC 4 cut(s) 171, 265, 1035, 1147
PstI CTGCAG 1 cut(s) 1652
PstNI CAGNNNCTG 1 cut(s) 1160
PsuI RGATCY 5 cut(s) 337, 525, 848, 1516, 1724
PvuI CGATCG 1 cut(s) 513
RsaI GTAC 4 cut(s) 1471, 1576, 1600, 1861
RsaNI GTAC 4 cut(s) 1470, 1575, 1599, 1860
RseI CAYNNNNRTG 1 cut(s) 1833
SapI GCTCTTC 1 cut(s) 696
SaqAI TTAA 3 cut(s) 1172, 1182, 1490
SatI GCNGC 2 cut(s) 1130, 1161
Sau3AI GATC 9 cut(s) 337, 510, 525, 706, 848, 994, 1361, 1516, 1724
Sau96I GGNCC 4 cut(s) 171, 265, 1035, 1147
SchI GAGTC 5 cut(s) 353, 434, 452, 1016, 1388
ScrFI CCNGG 3 cut(s) 149, 1462, 1477
SduI GDGCHC 3 cut(s) 612, 691, 736
SfaNI GCATC 3 cut(s) 796, 1006, 1726
SfcI CTRYAG 1 cut(s) 1648
SinI GGWCC 2 cut(s) 171, 265
SmiMI CAYNNNNRTG 1 cut(s) 1833
SmlI CTYRAG 1 cut(s) 348
SmoI CTYRAG 1 cut(s) 348
SspMI CTAG 5 cut(s) 320, 474, 842, 1407, 1553
StyD4I CCNGG 3 cut(s) 147, 1460, 1475
StyI CCWWGG 2 cut(s) 319, 1038
TaaI ACNGT 5 cut(s) 228, 607, 968, 1274, 1579
TaiI ACGT 3 cut(s) 249, 569, 1663
TaqI TCGA 7 cut(s) 163, 312, 428, 513, 746, 1360, 1414
TatI WGTACW 3 cut(s) 1574, 1598, 1859
TfiI GAWTC 7 cut(s) 41, 86, 470, 518, 583, 860, 1043
Tru1I TTAA 3 cut(s) 1172, 1182, 1490
Tru9I TTAA 3 cut(s) 1172, 1182, 1490
TscAI CASTG 4 cut(s) 492, 971, 1267, 1279
TseFI GTSAC 3 cut(s) 374, 962, 1402
TseI GCWGC 2 cut(s) 1129, 1160
Tsp45I GTSAC 3 cut(s) 374, 962, 1402
TspDTI ATGAA 6 cut(s) 33, 453, 873, 1157, 1317, 1544
TspGWI ACGGA 1 cut(s) 617
TspRI CASTG 4 cut(s) 492, 971, 1267, 1279
VpaK11BI GGWCC 2 cut(s) 171, 265
XagI CCTNNNNNAGG 1 cut(s) 617
XapI RAATTY 5 cut(s) 418, 430, 1226, 1421, 1632
XceI RCATGY 1 cut(s) 1223
XcmI CCANNNNNNNNNTGG 2 cut(s) 164, 529
XmaJI CCTAGG 1 cut(s) 319
XmiI GTMKAC 1 cut(s) 249
XmnI GAANNNNTTC 2 cut(s) 770, 1425
XspI CTAG 5 cut(s) 320, 474, 842, 1407, 1553
ZraI GACGTC 1 cut(s) 247
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.