MD16G1273900.v1.1

Belongs to the peptidase C19 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0011909
Physical Location & Seq
Reverse (-)
36439303 .. 36442767
3465 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1273900.v1.1.491

Sequence Viewer

Length: 1737 bp
ATGCCCGAAAATGCAGATGGGTCTTCCCCTCTGAAAGCCCTAGGCGACCCATCGCCGGATTCTTCTTTACCAAACCCTAACGGCTCTTCACCAATTTTTGAACAAGAACAAGGAGATCAAGGAGAACGAGAAGAAGAAGGTGAACATTCTCCACTGCCTTCGCCTCTCAATCTTGCCGGTAATAATTTATCAAATTGTGAATCGAATTCTTCCGATTCATTGCGATTTTCGTCTTCTTGGTTCTCTCCGTGGACTTTATCGTCTTCTACCAAGGATTCGCTGATTTCCTTACAATCCCAGTTTCCCATGGAAGAAACCAAACCCTCTATGGTGAGTGCAGGGCTTGCAAATCTAGGTAGCACATGCTTTATGAATGCAATCCTGCAGTGCTTTACACACACTGTGCCGCTCTTGGAGGGTCTTCATTCTTCCAATCATTCGATACCCTGTGATTGTGGTAGTGAAGGATTCTGCATTCTTTGTGCTCTTCGTGACCACATTGATCTTTCAATAGCTTCTTCAGGAAGAGTTGTTTCACCATGGAAACTTGTTGACAATTTGAATCATATCTCATCTTACTTCCAAAGATACCAGCAAGAAGATGCACATGAGTTCTTGCAGTGTTTTTTAGATAAACTTGAGAGATCTTCTTTGGATTGTATGAAAAAGGATGAGAGTTCCTCTGTGCAAGATAAAAACCTTGTGGAAAGGGTTTTTGGTGGTCGTCTCCTAAGCAAACTCCGATGTTGCAATTGCGGTCACTGTTCTGACACATATGAACCTCTGATTGATCTGAGTCTGGAGATTGAAGAAGCAGATACACTTCCAAGGGCTCTGGAGTCCTTCACTAAGATAGAAAATATCAATGACTCGGAGACAAAGTTTACATGTGAGAAGTGCAAAGAAGTGTCGGTGGAGAAGCAGCTTGTGGTTGACCAGGCCCCTCAAGTTGCTGCATTTCATCTAAAGAGATTTAAGACTGATGGATCTAATGTTCAGAAGATTGAAAAACATGTAGAGTTTCCTCGGGAGTTGGACTTGAAGCCATACACCAGTGGCAATGACATTGACAGCGATGTGGAATTGAAGTACGAACTTTATGCAATTGTGGAGCATGTTGGGTTCTCATCTACTTCTGGGCATTACTTTTGCTTTGTTCGATCGTCTCCAGATACATGGCATAGGTTGGATGACTCAAGGGTCACTAGGGTTCGAGAAGAATTTGTTCTATCACAGGGGGGATACATTCTGTTGTATGCAAGGAAGGGTACTCCCTGGTTTTCGAGTGTAGTGGAAGCACTAAAGCCATGCTTGGATCCAGCTATTATGAGTACATCACCTAAGTCGGTTCTAGAGAATGTTGAGAACATCAGTAATTTATCTCCTAGTGCCAATGATGTTCATTTTCGTGCTGCCAATGAACCCACCGATGCTCGTGAGATGAATACTCTTTCGTTGAGTCCAGTAAGACCTAAAGGAGTTGAGGTCTCTGACACTAGAGGTGCAGCTAATGGACTTTCTGAACGGATTAACGGATCTAGGCGTGATGCTGGTTGTTCCAAGGAGACTATAGATACTGATGCTGTCATTGATGCTTCGAATCCAGGTCAGGGAAGAAACAATTTTGATAAAACGTCACTCAACACTGAGAATATCTGTAGTACATCAACTCTTGTTGGAAGTGGCTGTCATAAAGGGTCTGCTAAAGTTATTCTCCAACCTATGACGCCACCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UCH

Protein Analysis

579

Amino Acids

63.54

Weight (kDa)

4.97

Isoelectric Point (pI)

51.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UCH PF00443 113 - 419 1.3e-60 Ubiquitin carboxyl-terminal hydrolase
UCH_1 PF13423 113 - 401 6.3e-26 Ubiquitin carboxyl-terminal hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011909)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G17895 AT5G46740 AT5G46740
fragaria_vesca FvH4_5g22140
malus_domestica MD06G1034700.v1.1 MD16G1273900.v1.1
prunus_persica Prupe.5G035200_v2.0.a1
pyrus_communis pycom06g02870 pycom16g24380
rosa_chinensis RchiOBHm_Chr7g0209791
rosa_laevigata RLG00000003090
rosa_multiflora Rmu_sc0001818.1_g000007
rosa_roxburghii Rroxscaffold_3G00248970
rosa_rugosa Rorug07G0116300
rosa_samantha Rh7AG250200 Rh7BG244100 Rh7CG266100 Rh7DG255800
rosa_wichuraiana Rw7G021190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 259, 1199
AccBSI CCGCTC 1 cut(s) 409
AciI CCGC 2 cut(s) 407, 756
AclWI GGATC 4 cut(s) 994, 1310, 1323, 1543
AcsI RAATTY 2 cut(s) 205, 1220
AcuI CTGAAG 1 cut(s) 504
AcyI GRCGYC 1 cut(s) 1727
AdeI CACNNNGTG 1 cut(s) 403
AfaI GTAC 4 cut(s) 1091, 1270, 1333, 1663
AfiI CCNNNNNNNGG 2 cut(s) 55, 1610
AflIII ACRYGT 2 cut(s) 887, 1012
AgsI TTSAA 7 cut(s) 101, 510, 562, 809, 1007, 1042, 1087
AjnI CCWGG 3 cut(s) 936, 1274, 1603
AjuI GAANNNNNNNTTGG 2 cut(s) 699, 731
AloI GAACNNNNNNTCC 2 cut(s) 978, 1010
AluBI AGCT 4 cut(s) 515, 925, 1322, 1508
AluI AGCT 4 cut(s) 515, 925, 1322, 1508
Alw21I GWGCWC 1 cut(s) 487
Alw26I GTCTC 5 cut(s) 731, 869, 1170, 1492, 1559
AlwI GGATC 4 cut(s) 994, 1310, 1323, 1543
Ama87I CYCGRG 1 cut(s) 1026
AoxI GGCC 1 cut(s) 939
ApeKI GCWGC 4 cut(s) 922, 953, 1412, 1505
ApoI RAATTY 2 cut(s) 205, 1220
Asp700I GAANNNNTTC 1 cut(s) 1224
AspA2I CCTAGG 1 cut(s) 40
AspS9I GGNCC 1 cut(s) 940
AsuHPI GGTGA 5 cut(s) 81, 152, 343, 528, 1329
AsuII TTCGAA 1 cut(s) 1598
AvaI CYCGRG 1 cut(s) 1026
AvrII CCTAGG 1 cut(s) 40
BamHI GGATCC 1 cut(s) 1315
BanII GRGCYC 1 cut(s) 835
BauI CACGAG 1 cut(s) 1434
BbsI GAAGAC 4 cut(s) 15, 225, 255, 413
Bbv12I GWGCWC 1 cut(s) 487
BbvI GCAGC 4 cut(s) 934, 940, 1399, 1517
BccI CCATC 3 cut(s) 11, 58, 977
BceAI ACGGC 1 cut(s) 97
BcgI CGANNNNNNTGC 2 cut(s) 1082, 1116
BciT130I CCWGG 3 cut(s) 938, 1276, 1605
BciVI GTATCC 1 cut(s) 1235
BcoDI GTCTC 5 cut(s) 731, 869, 1170, 1492, 1559
BfaI CTAG 7 cut(s) 41, 353, 1206, 1352, 1386, 1497, 1539
BfmI CTRYAG 3 cut(s) 383, 1569, 1657
BfuI GTATCC 1 cut(s) 1235
BglII AGATCT 1 cut(s) 644
BisI GCNGC 5 cut(s) 407, 923, 954, 1413, 1506
BlnI CCTAGG 1 cut(s) 40
BlsI GCNGC 5 cut(s) 408, 924, 955, 1414, 1507
Bme1390I CCNGG 3 cut(s) 938, 1276, 1605
BmeT110I CYCGRG 1 cut(s) 1026
BmgT120I GGNCC 1 cut(s) 940
BmiI GGNNCC 2 cut(s) 942, 1317
BmrFI CCNGG 3 cut(s) 938, 1276, 1605
BmrI ACTGGG 1 cut(s) 292
BmsI GCATC 5 cut(s) 592, 1420, 1537, 1570, 1582
BmuI ACTGGG 1 cut(s) 292
BpiI GAAGAC 4 cut(s) 15, 225, 255, 413
BplI GAGNNNNNCTC 2 cut(s) 665, 697
BpmI CTGGAG 3 cut(s) 821, 857, 1152
Bpu10I CCTNAGC 1 cut(s) 731
Bpu14I TTCGAA 1 cut(s) 1598
BpuEI CTTGAG 3 cut(s) 659, 930, 1180
BsaHI GRCGYC 1 cut(s) 1727
BsaI GGTCTC 1 cut(s) 1492
BsaJI CCNNGG 9 cut(s) 40, 248, 270, 306, 539, 827, 1025, 1274, 1560
BsaXI ACNNNNNCTCC 4 cut(s) 866, 896, 1470, 1500
Bsc4I CCNNNNNNNGG 2 cut(s) 55, 1610
Bse118I RCCGGY 1 cut(s) 176
Bse1I ACTGG 3 cut(s) 298, 1053, 1463
Bse3DI GCAATG 2 cut(s) 218, 1066
BseBI CCWGG 3 cut(s) 938, 1276, 1605
BseDI CCNNGG 9 cut(s) 40, 248, 270, 306, 539, 827, 1025, 1274, 1560
BseGI GGATG 2 cut(s) 676, 1195
BseLI CCNNNNNNNGG 2 cut(s) 55, 1610
BseMI GCAATG 2 cut(s) 218, 1066
BseMII CTCAG 2 cut(s) 785, 1638
BseNI ACTGG 3 cut(s) 298, 1053, 1463
BseXI GCAGC 4 cut(s) 934, 940, 1399, 1517
BsgI GTGCAG 2 cut(s) 357, 1524
Bsh1285I CGRYCG 1 cut(s) 1163
BshFI GGCC 1 cut(s) 941
BsiEI CGRYCG 1 cut(s) 1163
BsiHKAI GWGCWC 1 cut(s) 487
BsiHKCI CYCGRG 1 cut(s) 1026
BsiSI CCGG 2 cut(s) 56, 177
BslI CCNNNNNNNGG 2 cut(s) 55, 1610
BsmAI GTCTC 5 cut(s) 731, 869, 1170, 1492, 1559
BsmBI CGTCTC 2 cut(s) 731, 1170
BsmI GAATGC 2 cut(s) 379, 474
BsnI GGCC 1 cut(s) 941
Bso31I GGTCTC 1 cut(s) 1492
BsoBI CYCGRG 1 cut(s) 1026
Bsp119I TTCGAA 1 cut(s) 1598
Bsp1286I GDGCHC 2 cut(s) 487, 835
Bsp143I GATC 8 cut(s) 115, 502, 644, 790, 986, 1160, 1315, 1535
Bsp19I CCATGG 2 cut(s) 306, 539
BspACI CCGC 2 cut(s) 407, 756
BspANI GGCC 1 cut(s) 941
BspCNI CTCAG 2 cut(s) 786, 1639
BspLI GGNNCC 2 cut(s) 942, 1317
BspMAI CTGCAG 1 cut(s) 387
BspPI GGATC 4 cut(s) 994, 1310, 1323, 1543
BspQI GCTCTTC 2 cut(s) 91, 492
BspT104I TTCGAA 1 cut(s) 1598
BspTNI GGTCTC 1 cut(s) 1492
BsrBI CCGCTC 1 cut(s) 409
BsrDI GCAATG 2 cut(s) 218, 1066
BsrFI RCCGGY 1 cut(s) 176
BsrI ACTGG 3 cut(s) 298, 1053, 1463
BssAI RCCGGY 1 cut(s) 176
BssECI CCNNGG 9 cut(s) 40, 248, 270, 306, 539, 827, 1025, 1274, 1560
BssMI GATC 8 cut(s) 115, 502, 644, 790, 986, 1160, 1315, 1535
BssNI GRCGYC 1 cut(s) 1727
BssSI CACGAG 1 cut(s) 1434
BssT1I CCWWGG 6 cut(s) 40, 270, 306, 539, 827, 1560
Bst2BI CACGAG 1 cut(s) 1434
Bst2UI CCWGG 3 cut(s) 938, 1276, 1605
Bst4CI ACNGT 2 cut(s) 403, 764
Bst6I CTCTTC 3 cut(s) 91, 492, 520
BstACI GRCGYC 1 cut(s) 1727
BstAPI GCANNNNNTGC 1 cut(s) 344
BstBI TTCGAA 1 cut(s) 1598
BstC8I GCNNGC 1 cut(s) 345
BstDEI CTNAG 5 cut(s) 731, 794, 849, 1341, 1647
BstDSI CCRYGG 3 cut(s) 248, 306, 539
BstF5I GGATG 2 cut(s) 676, 1195
BstKTI GATC 8 cut(s) 118, 505, 647, 793, 989, 1163, 1318, 1538
BstMAI GTCTC 5 cut(s) 731, 869, 1170, 1492, 1559
BstMBI GATC 8 cut(s) 115, 502, 644, 790, 986, 1160, 1315, 1535
BstMCI CGRYCG 1 cut(s) 1163
BstMWI GCNNNNNNNGC 1 cut(s) 344
BstNI CCWGG 3 cut(s) 938, 1276, 1605
BstNSI RCATGY 4 cut(s) 366, 891, 1016, 1118
BstSCI CCNGG 3 cut(s) 936, 1274, 1603
BstSFI CTRYAG 3 cut(s) 383, 1569, 1657
BstV1I GCAGC 4 cut(s) 934, 940, 1399, 1517
BstV2I GAAGAC 4 cut(s) 15, 225, 255, 413
BstX2I RGATCY 4 cut(s) 644, 986, 1315, 1535
BstXI CCANNNNNNTGG 1 cut(s) 1176
BstYI RGATCY 4 cut(s) 644, 986, 1315, 1535
BsuI GTATCC 1 cut(s) 1235
BsuRI GGCC 1 cut(s) 941
BtgI CCRYGG 3 cut(s) 248, 306, 539
BtgZI GCGATG 2 cut(s) 36, 1089
BtsCI GGATG 2 cut(s) 676, 1195
BtsI GCAGTG 3 cut(s) 152, 392, 626
BtsIMutI CAGTG 7 cut(s) 152, 392, 399, 626, 760, 1060, 1644
Cac8I GCNNGC 1 cut(s) 345
Cfr10I RCCGGY 1 cut(s) 176
Cfr13I GGNCC 1 cut(s) 940
Csp6I GTAC 4 cut(s) 1090, 1269, 1332, 1662
CviAII CATG 9 cut(s) 307, 363, 540, 608, 888, 1013, 1115, 1176, 1308
CviQI GTAC 4 cut(s) 1090, 1269, 1332, 1662
DdeI CTNAG 5 cut(s) 731, 794, 849, 1341, 1647
DpnI GATC 8 cut(s) 117, 504, 646, 792, 988, 1162, 1317, 1537
DpnII GATC 8 cut(s) 115, 502, 644, 790, 986, 1160, 1315, 1535
DraIII CACNNNGTG 1 cut(s) 403
DrdI GACNNNNNNGTC 2 cut(s) 259, 1199
DseDI GACNNNNNNGTC 2 cut(s) 259, 1199
Eam1104I CTCTTC 3 cut(s) 91, 492, 520
EarI CTCTTC 3 cut(s) 91, 492, 520
Eco130I CCWWGG 6 cut(s) 40, 270, 306, 539, 827, 1560
Eco24I GRGCYC 1 cut(s) 835
Eco31I GGTCTC 1 cut(s) 1492
Eco57I CTGAAG 1 cut(s) 504
Eco88I CYCGRG 1 cut(s) 1026
EcoO109I RGGNCCY 1 cut(s) 940
EcoRI GAATTC 1 cut(s) 205
EcoRII CCWGG 3 cut(s) 936, 1274, 1603
EcoT14I CCWWGG 6 cut(s) 40, 270, 306, 539, 827, 1560
EcoT38I GRGCYC 1 cut(s) 835
ErhI CCWWGG 6 cut(s) 40, 270, 306, 539, 827, 1560
Esp3I CGTCTC 2 cut(s) 731, 1170
FaeI CATG 9 cut(s) 310, 366, 543, 611, 891, 1016, 1118, 1179, 1311
FalI AAGNNNNNCTT 2 cut(s) 1295, 1327
FatI CATG 9 cut(s) 306, 362, 539, 607, 887, 1012, 1114, 1175, 1307
FauNDI CATATG 1 cut(s) 775
Fnu4HI GCNGC 5 cut(s) 407, 923, 954, 1413, 1506
FokI GGATG 2 cut(s) 683, 1202
FriOI GRGCYC 1 cut(s) 835
Fsp4HI GCNGC 5 cut(s) 407, 923, 954, 1413, 1506
FspBI CTAG 7 cut(s) 41, 353, 1206, 1352, 1386, 1497, 1539
GluI GCNGC 5 cut(s) 407, 923, 954, 1413, 1506
GsuI CTGGAG 3 cut(s) 821, 857, 1152
HaeIII GGCC 1 cut(s) 941
HapII CCGG 2 cut(s) 56, 177
Hin1I GRCGYC 1 cut(s) 1727
Hin1II CATG 9 cut(s) 310, 366, 543, 611, 891, 1016, 1118, 1179, 1311
HincII GTYRAC 2 cut(s) 553, 934
HindII GTYRAC 2 cut(s) 553, 934
HpaII CCGG 2 cut(s) 56, 177
HphI GGTGA 5 cut(s) 81, 152, 343, 528, 1329
Hpy166II GTNNAC 5 cut(s) 143, 252, 553, 885, 934
Hpy188III TCNNGA 9 cut(s) 491, 522, 800, 836, 1028, 1169, 1214, 1352, 1436
Hpy8I GTNNAC 5 cut(s) 143, 252, 553, 885, 934
HpyAV CCTTC 5 cut(s) 131, 168, 458, 853, 1258
HpyCH4III ACNGT 2 cut(s) 403, 764
HpyCH4IV ACGT 1 cut(s) 1634
HpyF10VI GCNNNNNNNGC 1 cut(s) 344
HpyF3I CTNAG 5 cut(s) 731, 794, 849, 1341, 1647
HpySE526I ACGT 1 cut(s) 1634
Hsp92I GRCGYC 1 cut(s) 1727
Hsp92II CATG 9 cut(s) 310, 366, 543, 611, 891, 1016, 1118, 1179, 1311
Kzo9I GATC 8 cut(s) 115, 502, 644, 790, 986, 1160, 1315, 1535
LguI GCTCTTC 2 cut(s) 91, 492
LmnI GCTCC 1 cut(s) 1111
Lsp1109I GCAGC 4 cut(s) 934, 940, 1399, 1517
LweI GCATC 5 cut(s) 592, 1420, 1537, 1570, 1582
MaeI CTAG 7 cut(s) 41, 353, 1206, 1352, 1386, 1497, 1539
MaeII ACGT 1 cut(s) 1634
MaeIII GTNAC 4 cut(s) 491, 758, 1201, 1635
MalI GATC 8 cut(s) 117, 504, 646, 792, 988, 1162, 1317, 1537
MbiI CCGCTC 1 cut(s) 409
MboI GATC 8 cut(s) 115, 502, 644, 790, 986, 1160, 1315, 1535
MfeI CAATTG 2 cut(s) 751, 1104
MflI RGATCY 4 cut(s) 644, 986, 1315, 1535
MhlI GDGCHC 2 cut(s) 487, 835
MlyI GAGTC 5 cut(s) 805, 848, 863, 1187, 1468
MmeI TCCRAC 3 cut(s) 1014, 1167, 1657
MroXI GAANNNNTTC 1 cut(s) 1224
MseI TTAA 2 cut(s) 975, 1530
MslI CAYNNNNRTG 1 cut(s) 1407
MspI CCGG 2 cut(s) 56, 177
MspR9I CCNGG 3 cut(s) 938, 1276, 1605
MunI CAATTG 2 cut(s) 751, 1104
Mva1269I GAATGC 2 cut(s) 379, 474
MvaI CCWGG 3 cut(s) 938, 1276, 1605
MwoI GCNNNNNNNGC 1 cut(s) 344
NcoI CCATGG 2 cut(s) 306, 539
NdeI CATATG 1 cut(s) 775
NdeII GATC 8 cut(s) 115, 502, 644, 790, 986, 1160, 1315, 1535
NlaIII CATG 9 cut(s) 310, 366, 543, 611, 891, 1016, 1118, 1179, 1311
NlaIV GGNNCC 2 cut(s) 942, 1317
NmuCI GTSAC 4 cut(s) 491, 758, 1201, 1635
NspI RCATGY 4 cut(s) 366, 891, 1016, 1118
NspV TTCGAA 1 cut(s) 1598
PciI ACATGT 2 cut(s) 887, 1012
PciSI GCTCTTC 2 cut(s) 91, 492
PctI GAATGC 2 cut(s) 379, 474
PdmI GAANNNNTTC 1 cut(s) 1224
PfeI GAWTC 7 cut(s) 59, 200, 215, 275, 468, 562, 1600
PkrI GCNGC 5 cut(s) 408, 924, 955, 1414, 1507
Ple19I CGATCG 1 cut(s) 1163
PleI GAGTC 5 cut(s) 804, 847, 863, 1187, 1467
PpsI GAGTC 5 cut(s) 804, 847, 863, 1187, 1467
PscI ACATGT 2 cut(s) 887, 1012
Psp6I CCWGG 3 cut(s) 936, 1274, 1603
PspGI CCWGG 3 cut(s) 936, 1274, 1603
PspN4I GGNNCC 2 cut(s) 942, 1317
PspPI GGNCC 1 cut(s) 940
PstI CTGCAG 1 cut(s) 387
PsuI RGATCY 4 cut(s) 644, 986, 1315, 1535
PvuI CGATCG 1 cut(s) 1163
RsaI GTAC 4 cut(s) 1091, 1270, 1333, 1663
RsaNI GTAC 4 cut(s) 1090, 1269, 1332, 1662
RseI CAYNNNNRTG 1 cut(s) 1407
SapI GCTCTTC 2 cut(s) 91, 492
SaqAI TTAA 2 cut(s) 975, 1530
SatI GCNGC 5 cut(s) 407, 923, 954, 1413, 1506
Sau3AI GATC 8 cut(s) 115, 502, 644, 790, 986, 1160, 1315, 1535
Sau96I GGNCC 1 cut(s) 940
SchI GAGTC 5 cut(s) 805, 848, 863, 1187, 1468
ScrFI CCNGG 3 cut(s) 938, 1276, 1605
SduI GDGCHC 2 cut(s) 487, 835
SfaNI GCATC 5 cut(s) 592, 1420, 1537, 1570, 1582
SfcI CTRYAG 3 cut(s) 383, 1569, 1657
SfuI TTCGAA 1 cut(s) 1598
SmiMI CAYNNNNRTG 1 cut(s) 1407
SmlI CTYRAG 3 cut(s) 638, 945, 1195
SmoI CTYRAG 3 cut(s) 638, 945, 1195
SsiI CCGC 2 cut(s) 407, 756
SspMI CTAG 7 cut(s) 41, 353, 1206, 1352, 1386, 1497, 1539
StyD4I CCNGG 3 cut(s) 936, 1274, 1603
StyI CCWWGG 6 cut(s) 40, 270, 306, 539, 827, 1560
TaaI ACNGT 2 cut(s) 403, 764
TaiI ACGT 1 cut(s) 1637
TaqI TCGA 6 cut(s) 203, 440, 1159, 1213, 1283, 1598
TatI WGTACW 2 cut(s) 1331, 1661
TauI GCSGC 1 cut(s) 409
TfiI GAWTC 7 cut(s) 59, 200, 215, 275, 468, 562, 1600
Tru1I TTAA 2 cut(s) 975, 1530
Tru9I TTAA 2 cut(s) 975, 1530
TscAI CASTG 7 cut(s) 159, 392, 406, 626, 767, 1060, 1651
TseFI GTSAC 4 cut(s) 491, 758, 1201, 1635
TseI GCWGC 4 cut(s) 922, 953, 1412, 1505
Tsp45I GTSAC 4 cut(s) 491, 758, 1201, 1635
TspDTI ATGAA 9 cut(s) 207, 386, 413, 677, 792, 950, 1391, 1434, 1457
TspGWI ACGGA 3 cut(s) 237, 1540, 1548
TspRI CASTG 7 cut(s) 159, 392, 406, 626, 767, 1060, 1651
XapI RAATTY 2 cut(s) 205, 1220
XbaI TCTAGA 1 cut(s) 1351
XceI RCATGY 4 cut(s) 366, 891, 1016, 1118
XcmI CCANNNNNNNNNTGG 1 cut(s) 325
XmaJI CCTAGG 1 cut(s) 40
XmnI GAANNNNTTC 1 cut(s) 1224
XspI CTAG 7 cut(s) 41, 353, 1206, 1352, 1386, 1497, 1539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.