MD06G1170700.v1.1

Belongs to the GDA1 CD39 NTPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0012614
Physical Location & Seq
Reverse (-)
31131402 .. 31134359
2958 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1170700.v1.1.491

Sequence Viewer

Length: 1650 bp
ATGGAACCCAAATCTCCTTCAAAACTTAAGCTCTCAATCATGGGATCCACTCAATATAAACAGGCATTTAAAACAAGTATTATGATCATAGTTATAATGCTCTTGTTCTTTGGTGCCTATTTCGGATTTAATTCTGTGAAAGGCCGTAGTGCTAGTGCATCTAAAGGGTCATACTTTACTGTGGTTGTTGATTGTGGAAGCACGGGTACCCGAGTTAACGTGTACGAGTGGCTGGGAATGGGTGTTAGTGGTAAGGAATTGCCTACATTGTTGTACTCTTATCCGGATAATTCAACTAAGGGTATGGTTTCAAAGAGCTGTAAGTATCACTGTCTGCAAACTGAGCCTGGTTTGGATAAATTTGTTGGAAACTTGTCGGGAGTAAGAGCATCTTTGGAACCACTAATTACATTGGCGGAACATAAGGTTCCTTCGGAAAGACGCAGAGAGACTCCTATTTTTGTTCTAGCTACTGCTGGATTAAGGAGATTGGCAGTGGAGGATTCTAGGCAGGTCTTAGATGATATCAAATCCGTCCTAAAAGAATGTTCTTTTTTGTACAAAAAGAGTTGGATTAGGGTGTTGAGTGGCAAAGAAGAAGCTTATTATGGTTGGGTTGCTCTAAATTATAAAATCCATAGTTTTCAGAATCCTTCAAGGTCACCCACTTTGGGACTTCTCGACTTGGGAGGTTCATCGTTGCAGGTTGTAGTGGAAACTGATGGCGCAAGAGAAGATGCAAACTTGCTGAGATCAAAATTTGGCTTTGTTGAACACGAGATTTTAGCTTACTCATTGTCAGAATTCGGATTAAATGAAGCATTTGATCGGACAGTTGCTATGCTGAGCCAACGCAGAGAAAGTGCTGCAGGTGTATTAGAGATCAGACATCCTTGTCTTCGTATTGATGTGGTCCAAAACTATACGTGCTATGGTTGTGTCCAACAAAATGGTGCTGATCGGAAAAATGTCATTGGCCAATTGCAAGAAACTAAATTTCCTTCGGTGCATCTGGTTGGAGCACCGGATTGGGAGCAATGCAGAACACTTGCCAGGGCTGCTGCTATCAATTCAAGCACATCTGACGCAGAACAAAGAACAAGGCCATGTTCTGATAATGGGAGTGAAATGGTGAATTTGACAGCCGTTGCTCACCCCACAGCCTGCTTTCACGCCTTATCTGGATTTTTCGCAGTTTATGACAAGTTGAATTTGAGTGGCCGAGCCACCTTGCCCAAGATATGGGAGAAAGGCCAGCAACTATGCTCCAAATCATGGTCCGACCAAACCCGCAACTCACAAAACGGTTATTTTGCTTGGCAATATTGTTTTCGGGTACCTTACATGGCATCACTTGTCGAGGATGCTCTGTGTCTTGGTGACAAAGAGATCGTTTTTGGTCCTCCAGACGTTACTTGGACATTAGGAGCTGCCCTGGTCGAAGGAGAGTATTTATGGTCGAGTACAAGTCGATCTCGGACCAGCATTTTGACCCTAAACATGGAGGTTGCATCCTCCCCCATTTTTGTACTTGTTTTACTTCTTTTTCTTCTGGTGGTTGTGTATTGTAGTCAAGTGAAGCTGCCCATGATCGGCAAGCAAGGCGCAGCTAGGGCATCTTTGCCAGTAAGAGAACAGATGATGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000139 GO:0003006 GO:0003674 GO:0003824 GO:0004382 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006139 GO:0006152 GO:0006163 GO:0006195 GO:0006213 GO:0006220 GO:0006244 GO:0006256 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007548 GO:0008150 GO:0008152 GO:0008406 GO:0009056 GO:0009058 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009125 GO:0009126 GO:0009128 GO:0009132 GO:0009134 GO:0009135 GO:0009137 GO:0009138 GO:0009140 GO:0009150 GO:0009154 GO:0009158 GO:0009161 GO:0009164 GO:0009166 GO:0009167 GO:0009169 GO:0009179 GO:0009181 GO:0009185 GO:0009191 GO:0009193 GO:0009195 GO:0009218 GO:0009222 GO:0009259 GO:0009261 GO:0009653 GO:0009887 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010556 GO:0010557 GO:0010559 GO:0010560 GO:0010604 GO:0012505 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017110 GO:0018130 GO:0019222 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0022414 GO:0030173 GO:0030334 GO:0031090 GO:0031224 GO:0031228 GO:0031300 GO:0031301 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031399 GO:0031401 GO:0031984 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032879 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0034656 GO:0035262 GO:0040012 GO:0042278 GO:0042454 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043262 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044282 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045134 GO:0045137 GO:0046031 GO:0046032 GO:0046048 GO:0046128 GO:0046130 GO:0046131 GO:0046133 GO:0046135 GO:0046434 GO:0046483 GO:0046700 GO:0046710 GO:0046712 GO:0048513 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051270 GO:0055086 GO:0060049 GO:0060050 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0072521 GO:0072523 GO:0072527 GO:0072529 GO:0080090 GO:0098588 GO:0098791 GO:1901068 GO:1901069 GO:1901135 GO:1901136 GO:1901292 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901657 GO:1901658 GO:1903018 GO:1903020 GO:2000112 GO:2000145
KEGG Pathways
Metabolic & Signaling
ko00230 ko00240 ko05169 map00230 map00240 map05169
Pfam Domains
Protein Families
GDA1_CD39

Protein Analysis

550

Amino Acids

60.81

Weight (kDa)

8.62

Isoelectric Point (pI)

37.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GDA1_CD39 PF01150 57 - 479 1.9e-54 GDA1/CD39 (nucleoside phosphatase) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 95, 630
AarI CACCTGC 1 cut(s) 860
AasI GACNNNNNNGTC 1 cut(s) 894
Acc36I ACCTGC 3 cut(s) 502, 694, 860
Acc65I GGTACC 2 cut(s) 206, 1336
AccB1I GGYRCC 3 cut(s) 113, 206, 1336
AccB7I CCANNNNNTGG 2 cut(s) 1242, 1275
AccIII TCCGGA 1 cut(s) 283
AciI CCGC 2 cut(s) 416, 1291
AclWI GGATC 2 cut(s) 39, 52
AcoI YGGCCR 2 cut(s) 976, 1219
AcsI RAATTY 6 cut(s) 359, 758, 803, 995, 1135, 1210
AfaI GTAC 7 cut(s) 208, 224, 275, 560, 1338, 1465, 1530
AfiI CCNNNNNNNGG 5 cut(s) 671, 1242, 1275, 1501, 1592
AflII CTTAAG 1 cut(s) 26
AflIII ACRYGT 1 cut(s) 219
AgsI TTSAA 7 cut(s) 21, 294, 312, 657, 773, 1074, 1210
AjnI CCWGG 3 cut(s) 346, 1052, 1434
AluBI AGCT 8 cut(s) 31, 318, 470, 602, 788, 1430, 1582, 1610
AluI AGCT 8 cut(s) 31, 318, 470, 602, 788, 1430, 1582, 1610
Alw21I GWGCWC 1 cut(s) 1024
Alw26I GTCTC 1 cut(s) 443
AlwI GGATC 2 cut(s) 39, 52
Ama87I CYCGRG 1 cut(s) 210
Aor13HI TCCGGA 1 cut(s) 283
AoxI GGCC 5 cut(s) 142, 976, 1103, 1219, 1252
ApeKI GCWGC 6 cut(s) 866, 1058, 1061, 1430, 1582, 1607
ApoI RAATTY 6 cut(s) 359, 758, 803, 995, 1135, 1210
ArsI GACNNNNNNTTYG 2 cut(s) 1471, 1503
Asp718I GGTACC 2 cut(s) 206, 1336
AspLEI GCGC 2 cut(s) 728, 1607
AspS9I GGNCC 4 cut(s) 913, 1278, 1400, 1479
AsuHPI GGTGA 4 cut(s) 654, 1144, 1145, 1391
AvaI CYCGRG 1 cut(s) 210
AvaII GGWCC 4 cut(s) 913, 1278, 1400, 1479
BaeI ACNNNNGTAYC 2 cut(s) 198, 231
BalI TGGCCA 1 cut(s) 978
BamHI GGATCC 1 cut(s) 44
BanI GGYRCC 3 cut(s) 113, 206, 1336
BarI GAAGNNNNNNTAC 2 cut(s) 190, 222
BauI CACGAG 1 cut(s) 776
BbsI GAAGAC 1 cut(s) 890
Bbv12I GWGCWC 1 cut(s) 1024
BbvI GCAGC 6 cut(s) 853, 1045, 1048, 1417, 1569, 1619
BccI CCATC 2 cut(s) 716, 1636
BceAI ACGGC 2 cut(s) 129, 1130
BciT130I CCWGG 3 cut(s) 348, 1054, 1436
BclI TGATCA 1 cut(s) 84
BcoDI GTCTC 1 cut(s) 443
BfaI CTAG 4 cut(s) 153, 467, 507, 1611
BfmI CTRYAG 1 cut(s) 867
BfrI CTTAAG 1 cut(s) 26
BfuAI ACCTGC 3 cut(s) 502, 694, 860
BisI GCNGC 6 cut(s) 867, 1059, 1062, 1431, 1583, 1608
BlpI GCTNAGC 1 cut(s) 845
BlsI GCNGC 6 cut(s) 868, 1060, 1063, 1432, 1584, 1609
Bme1390I CCNGG 3 cut(s) 348, 1054, 1436
Bme18I GGWCC 4 cut(s) 913, 1278, 1400, 1479
BmeT110I CYCGRG 1 cut(s) 210
BmgT120I GGNCC 4 cut(s) 913, 1278, 1400, 1479
BmiI GGNNCC 7 cut(s) 6, 46, 115, 208, 399, 429, 1338
BmrFI CCNGG 3 cut(s) 348, 1054, 1436
BmsI GCATC 8 cut(s) 167, 398, 727, 1018, 1354, 1358, 1520, 1625
BpiI GAAGAC 1 cut(s) 890
BpmI CTGGAG 1 cut(s) 1389
Bpu1102I GCTNAGC 1 cut(s) 845
BsaAI YACGTR 1 cut(s) 927
BsaJI CCNNGG 2 cut(s) 1053, 1434
BsaWI WCCGGW 2 cut(s) 283, 1024
Bsc4I CCNNNNNNNGG 5 cut(s) 671, 1242, 1275, 1501, 1592
Bse1I ACTGG 1 cut(s) 1625
Bse3DI GCAATG 1 cut(s) 1043
BseAI TCCGGA 1 cut(s) 283
BseBI CCWGG 3 cut(s) 348, 1054, 1436
BseDI CCNNGG 2 cut(s) 1053, 1434
BseGI GGATG 3 cut(s) 889, 1369, 1511
BseLI CCNNNNNNNGG 5 cut(s) 671, 1242, 1275, 1501, 1592
BseMI GCAATG 1 cut(s) 1043
BseMII CTCAG 3 cut(s) 333, 740, 836
BseNI ACTGG 1 cut(s) 1625
BseXI GCAGC 6 cut(s) 853, 1045, 1048, 1417, 1569, 1619
BseYI CCCAGC 1 cut(s) 232
BshFI GGCC 5 cut(s) 144, 978, 1105, 1221, 1254
BshNI GGYRCC 3 cut(s) 113, 206, 1336
BsiHKAI GWGCWC 1 cut(s) 1024
BsiHKCI CYCGRG 1 cut(s) 210
BsiSI CCGG 2 cut(s) 284, 1025
BslFI GGGAC 1 cut(s) 687
BslI CCNNNNNNNGG 5 cut(s) 671, 1242, 1275, 1501, 1592
BsmAI GTCTC 1 cut(s) 443
BsmFI GGGAC 1 cut(s) 687
BsnI GGCC 5 cut(s) 144, 978, 1105, 1221, 1254
BsoBI CYCGRG 1 cut(s) 210
Bsp1286I GDGCHC 1 cut(s) 1024
Bsp13I TCCGGA 1 cut(s) 283
Bsp1407I TGTACA 1 cut(s) 558
Bsp143I GATC 9 cut(s) 44, 84, 752, 826, 882, 958, 1389, 1472, 1590
Bsp1720I GCTNAGC 1 cut(s) 845
BspACI CCGC 2 cut(s) 416, 1291
BspANI GGCC 5 cut(s) 144, 978, 1105, 1221, 1254
BspCNI CTCAG 3 cut(s) 334, 741, 837
BspEI TCCGGA 1 cut(s) 283
BspLI GGNNCC 7 cut(s) 6, 46, 115, 208, 399, 429, 1338
BspMAI CTGCAG 1 cut(s) 871
BspMI ACCTGC 3 cut(s) 502, 694, 860
BspPI GGATC 2 cut(s) 39, 52
BspT107I GGYRCC 3 cut(s) 113, 206, 1336
BspTI CTTAAG 1 cut(s) 26
BsrDI GCAATG 1 cut(s) 1043
BsrGI TGTACA 1 cut(s) 558
BsrI ACTGG 1 cut(s) 1625
BssECI CCNNGG 2 cut(s) 1053, 1434
BssMI GATC 9 cut(s) 44, 84, 752, 826, 882, 958, 1389, 1472, 1590
BssSI CACGAG 1 cut(s) 776
Bst2BI CACGAG 1 cut(s) 776
Bst2UI CCWGG 3 cut(s) 348, 1054, 1436
Bst4CI ACNGT 4 cut(s) 181, 332, 835, 1307
BstAFI CTTAAG 1 cut(s) 26
BstAUI TGTACA 1 cut(s) 558
BstBAI YACGTR 1 cut(s) 927
BstC8I GCNNGC 3 cut(s) 1165, 1256, 1598
BstDEI CTNAG 5 cut(s) 297, 342, 517, 749, 845
BstEII GGTNACC 1 cut(s) 660
BstF5I GGATG 3 cut(s) 889, 1369, 1511
BstHHI GCGC 2 cut(s) 728, 1607
BstKTI GATC 9 cut(s) 47, 87, 755, 829, 885, 961, 1392, 1475, 1593
BstMAI GTCTC 1 cut(s) 443
BstMBI GATC 9 cut(s) 44, 84, 752, 826, 882, 958, 1389, 1472, 1590
BstMWI GCNNNNNNNGC 4 cut(s) 343, 1058, 1602, 1613
BstNI CCWGG 3 cut(s) 348, 1054, 1436
BstPI GGTNACC 1 cut(s) 660
BstSCI CCNGG 3 cut(s) 346, 1052, 1434
BstSFI CTRYAG 1 cut(s) 867
BstV1I GCAGC 6 cut(s) 853, 1045, 1048, 1417, 1569, 1619
BstV2I GAAGAC 1 cut(s) 890
BstX2I RGATCY 1 cut(s) 44
BstXI CCANNNNNNTGG 1 cut(s) 950
BstYI RGATCY 1 cut(s) 44
BsuRI GGCC 5 cut(s) 144, 978, 1105, 1221, 1254
BtsCI GGATG 3 cut(s) 889, 1369, 1511
BtsI GCAGTG 1 cut(s) 501
BtsIMutI CAGTG 2 cut(s) 328, 501
BveI ACCTGC 3 cut(s) 502, 694, 860
Cac8I GCNNGC 3 cut(s) 1165, 1256, 1598
CfoI GCGC 2 cut(s) 728, 1607
Cfr13I GGNCC 4 cut(s) 913, 1278, 1400, 1479
CseI GACGC 2 cut(s) 450, 1094
Csp6I GTAC 7 cut(s) 207, 223, 274, 559, 1337, 1464, 1529
CviAII CATG 6 cut(s) 40, 1107, 1275, 1345, 1501, 1588
CviQI GTAC 7 cut(s) 207, 223, 274, 559, 1337, 1464, 1529
DdeI CTNAG 5 cut(s) 297, 342, 517, 749, 845
DpnI GATC 9 cut(s) 46, 86, 754, 828, 884, 960, 1391, 1474, 1592
DpnII GATC 9 cut(s) 44, 84, 752, 826, 882, 958, 1389, 1472, 1590
DraI TTTAAA 1 cut(s) 70
DrdI GACNNNNNNGTC 1 cut(s) 894
DseDI GACNNNNNNGTC 1 cut(s) 894
EaeI YGGCCR 2 cut(s) 976, 1219
EciI GGCGGA 1 cut(s) 431
Eco32I GATATC 1 cut(s) 526
Eco47I GGWCC 4 cut(s) 913, 1278, 1400, 1479
Eco88I CYCGRG 1 cut(s) 210
Eco91I GGTNACC 1 cut(s) 660
EcoO65I GGTNACC 1 cut(s) 660
EcoRI GAATTC 1 cut(s) 803
EcoRII CCWGG 3 cut(s) 346, 1052, 1434
EcoRV GATATC 1 cut(s) 526
FaeI CATG 6 cut(s) 43, 1110, 1278, 1348, 1504, 1591
FalI AAGNNNNNCTT 2 cut(s) 376, 408
FaqI GGGAC 1 cut(s) 687
FatI CATG 6 cut(s) 39, 1106, 1274, 1344, 1500, 1587
FauI CCCGC 1 cut(s) 1298
FbaI TGATCA 1 cut(s) 84
Fnu4HI GCNGC 6 cut(s) 867, 1059, 1062, 1431, 1583, 1608
FokI GGATG 3 cut(s) 876, 1376, 1498
Fsp4HI GCNGC 6 cut(s) 867, 1059, 1062, 1431, 1583, 1608
FspBI CTAG 4 cut(s) 153, 467, 507, 1611
GlaI GCGC 2 cut(s) 727, 1606
GluI GCNGC 6 cut(s) 867, 1059, 1062, 1431, 1583, 1608
GsaI CCCAGC 1 cut(s) 236
GsuI CTGGAG 1 cut(s) 1389
HaeIII GGCC 5 cut(s) 144, 978, 1105, 1221, 1254
HapII CCGG 2 cut(s) 284, 1025
HgaI GACGC 2 cut(s) 450, 1094
HhaI GCGC 2 cut(s) 728, 1607
Hin1II CATG 6 cut(s) 43, 1110, 1278, 1348, 1504, 1591
Hin6I GCGC 2 cut(s) 726, 1605
HinP1I GCGC 2 cut(s) 726, 1605
HincII GTYRAC 1 cut(s) 217
HindII GTYRAC 1 cut(s) 217
HindIII AAGCTT 1 cut(s) 600
HinfI GANTC 3 cut(s) 451, 503, 649
HpaI GTTAAC 1 cut(s) 217
HpaII CCGG 2 cut(s) 284, 1025
HphI GGTGA 4 cut(s) 654, 1144, 1145, 1391
Hpy166II GTNNAC 2 cut(s) 217, 223
Hpy188III TCNNGA 5 cut(s) 284, 378, 680, 1182, 1406
Hpy8I GTNNAC 2 cut(s) 217, 223
HpyAV CCTTC 5 cut(s) 27, 441, 663, 1011, 1436
HpyCH4III ACNGT 4 cut(s) 181, 332, 835, 1307
HpyCH4IV ACGT 3 cut(s) 219, 926, 1410
HpyCH4V TGCA 9 cut(s) 158, 337, 703, 740, 869, 985, 1009, 1041, 1511
HpyF10VI GCNNNNNNNGC 4 cut(s) 343, 1058, 1602, 1613
HpyF3I CTNAG 5 cut(s) 297, 342, 517, 749, 845
HpySE526I ACGT 3 cut(s) 219, 926, 1410
Hsp92II CATG 6 cut(s) 43, 1110, 1278, 1348, 1504, 1591
HspAI GCGC 2 cut(s) 726, 1605
Kpn2I TCCGGA 1 cut(s) 283
KpnI GGTACC 2 cut(s) 210, 1340
Ksp22I TGATCA 1 cut(s) 84
KspAI GTTAAC 1 cut(s) 217
Kzo9I GATC 9 cut(s) 44, 84, 752, 826, 882, 958, 1389, 1472, 1590
LmnI GCTCC 4 cut(s) 1019, 1033, 1271, 1427
Lsp1109I GCAGC 6 cut(s) 853, 1045, 1048, 1417, 1569, 1619
LweI GCATC 8 cut(s) 167, 398, 727, 1018, 1354, 1358, 1520, 1625
MaeI CTAG 4 cut(s) 153, 467, 507, 1611
MaeII ACGT 3 cut(s) 219, 926, 1410
MaeIII GTNAC 3 cut(s) 660, 1379, 1411
MalI GATC 9 cut(s) 46, 86, 754, 828, 884, 960, 1391, 1474, 1592
MboI GATC 9 cut(s) 44, 84, 752, 826, 882, 958, 1389, 1472, 1590
MboII GAAGA 4 cut(s) 608, 746, 890, 1541
MfeI CAATTG 1 cut(s) 980
MflI RGATCY 1 cut(s) 44
MhlI GDGCHC 1 cut(s) 1024
MlsI TGGCCA 1 cut(s) 978
MluNI TGGCCA 1 cut(s) 978
MlyI GAGTC 1 cut(s) 445
MmeI TCCRAC 5 cut(s) 346, 551, 967, 997, 1305
MnlI CCTC 6 cut(s) 493, 683, 1354, 1413, 1498, 1525
Mox20I TGGCCA 1 cut(s) 978
MroI TCCGGA 1 cut(s) 283
MscI TGGCCA 1 cut(s) 978
MseI TTAA 6 cut(s) 27, 69, 129, 216, 482, 812
Msp20I TGGCCA 1 cut(s) 978
MspCI CTTAAG 1 cut(s) 26
MspI CCGG 2 cut(s) 284, 1025
MspR9I CCNGG 3 cut(s) 348, 1054, 1436
MunI CAATTG 1 cut(s) 980
MvaI CCWGG 3 cut(s) 348, 1054, 1436
MwoI GCNNNNNNNGC 4 cut(s) 343, 1058, 1602, 1613
NdeII GATC 9 cut(s) 44, 84, 752, 826, 882, 958, 1389, 1472, 1590
NlaIII CATG 6 cut(s) 43, 1110, 1278, 1348, 1504, 1591
NlaIV GGNNCC 7 cut(s) 6, 46, 115, 208, 399, 429, 1338
NmeAIII GCCGAG 1 cut(s) 1247
NmuCI GTSAC 2 cut(s) 660, 1379
PaqCI CACCTGC 1 cut(s) 860
PfeI GAWTC 2 cut(s) 503, 649
PflMI CCANNNNNTGG 2 cut(s) 1242, 1275
PkrI GCNGC 6 cut(s) 868, 1060, 1063, 1432, 1584, 1609
PleI GAGTC 1 cut(s) 445
PpsI GAGTC 1 cut(s) 445
Ppu21I YACGTR 1 cut(s) 927
PsiI TTATAA 2 cut(s) 95, 630
Psp6I CCWGG 3 cut(s) 346, 1052, 1434
PspEI GGTNACC 1 cut(s) 660
PspFI CCCAGC 1 cut(s) 232
PspGI CCWGG 3 cut(s) 346, 1052, 1434
PspN4I GGNNCC 7 cut(s) 6, 46, 115, 208, 399, 429, 1338
PspPI GGNCC 4 cut(s) 913, 1278, 1400, 1479
PstI CTGCAG 1 cut(s) 871
PsuI RGATCY 1 cut(s) 44
RsaI GTAC 7 cut(s) 208, 224, 275, 560, 1338, 1465, 1530
RsaNI GTAC 7 cut(s) 207, 223, 274, 559, 1337, 1464, 1529
SaqAI TTAA 6 cut(s) 27, 69, 129, 216, 482, 812
SatI GCNGC 6 cut(s) 867, 1059, 1062, 1431, 1583, 1608
Sau3AI GATC 9 cut(s) 44, 84, 752, 826, 882, 958, 1389, 1472, 1590
Sau96I GGNCC 4 cut(s) 913, 1278, 1400, 1479
SchI GAGTC 1 cut(s) 445
ScrFI CCNGG 3 cut(s) 348, 1054, 1436
SduI GDGCHC 1 cut(s) 1024
SfaNI GCATC 8 cut(s) 167, 398, 727, 1018, 1354, 1358, 1520, 1625
SfcI CTRYAG 1 cut(s) 867
SinI GGWCC 4 cut(s) 913, 1278, 1400, 1479
SmlI CTYRAG 1 cut(s) 26
SmoI CTYRAG 1 cut(s) 26
SsiI CCGC 2 cut(s) 416, 1291
SspI AATATT 1 cut(s) 1325
SspMI CTAG 4 cut(s) 153, 467, 507, 1611
StyD4I CCNGG 3 cut(s) 346, 1052, 1434
TaaI ACNGT 4 cut(s) 181, 332, 835, 1307
TaiI ACGT 3 cut(s) 222, 929, 1413
TaqI TCGA 5 cut(s) 681, 1359, 1440, 1460, 1471
TatI WGTACW 4 cut(s) 273, 558, 1463, 1528
TfiI GAWTC 2 cut(s) 503, 649
Tru1I TTAA 6 cut(s) 27, 69, 129, 216, 482, 812
Tru9I TTAA 6 cut(s) 27, 69, 129, 216, 482, 812
TscAI CASTG 2 cut(s) 335, 501
TseFI GTSAC 2 cut(s) 660, 1379
TseI GCWGC 6 cut(s) 866, 1058, 1061, 1430, 1582, 1607
Tsp45I GTSAC 2 cut(s) 660, 1379
TspDTI ATGAA 2 cut(s) 684, 831
TspGWI ACGGA 1 cut(s) 523
TspRI CASTG 2 cut(s) 335, 501
Van91I CCANNNNNTGG 2 cut(s) 1242, 1275
Vha464I CTTAAG 1 cut(s) 26
VpaK11BI GGWCC 4 cut(s) 913, 1278, 1400, 1479
XapI RAATTY 6 cut(s) 359, 758, 803, 995, 1135, 1210
XcmI CCANNNNNNNNNTGG 1 cut(s) 1413
XspI CTAG 4 cut(s) 153, 467, 507, 1611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.