Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0009952

Physical Location & Seq

Genomic Coordinates Reverse (-)

24475041 .. 24478748

Gene Structure 3708 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1170000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1179 bp

ATGGCGTCGGTGGCAGGAGCAGCAGCAGCGCTAGCTTCTCTCTCCTCCTCCCTCCTCTCCAAACCCTCCCTCTCTCTCATCCCCATCCGCACACTCCCCCGCCTCACCTGCTCCCTCGCCACTTCCTCCTCTTCTCAGGAGTTCAACATCACATTCGCGCCACCGAAGCCCAAGCCCAAACCCGACTCCGCCGAGCTCGACCAGGATGCCCTCGCCGGGCAGCTCATCATCCCCTGGATCGTCCGCGGCGAGGACGGCAACCTCAAGCTCCAGTCGCACCCTCCCGCGCGTTTCCTCCAGGCCATCGAGACCAAGAGTAAGAGTGCCAAGAAGAAGAAGGAGGGCACCGAGAAGCGCGTGCCCACGGCCGAGCCCAAGTACTCGAAAGCCGCCCGGAGGTTCTACAACGAGAATTTCAGAGACGCCGAGCAGCGGCTCAGCAAGGTTCTCGCTGCCGCCGGAGTGGCATCGAGGAGGAGCAGTGAGCAGCTTATCTTTGATGGGAAGGTCACTGTGAATGGTTCTGTGTGCAATACTCCTCAAACTAAAGTTGATCCTGGAAGGGATATTATATATGTCAACGGAAATCGGATTCCGAAGAGACTGCCTCCAAAGGTTTATCTTGCCCTTAACAAGCCAAAAGGGTACATTTGCGCATCTGGGGAGAATAAATCTGTGTTGGGTCTATTTGAAGATTATTTGAAGACTTGGGATAAGAGAAATTCAGGAGTACCCAGACCACGACTATTTACTGTTGGCCGTCTTGATGTTGCCACAACTGGGTTGATCATTGTGACCAATGATGGAGATTTTGCTCAGAAGATATCACATCCGTCTTCAAACTTGTCAAAGGAATACATTGCAGCAATAGAAGGTGTAGTTAGTAAGCGGCACCTGTTAGCCATCAGTGAGGGAACAAGCATCGATGGTGTCCATTGCACCCCAGATTCTGTGGAATTACTGCCACAACAACCAGATATGCCAAGACCCCGTTTGCGTATTGTGGTTCATGAAGGGAGGAACCATGAAGTACGAGAACTTGTTAAAAATGCTGGACTTGAGATACATTCACTAAAGCGTGTACGTATAGGTGGCTTCAGACTTCCGTCAGATCTTGGGCTTGGAAAGCACATGGACTTAAAACAAGGGGATCTTGGCGCCTTGGGTTGGAAAAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000455 GO:0000470 GO:0000488 GO:0000489 GO:0001522 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009501 GO:0009507 GO:0009536 GO:0009657 GO:0009982 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0016853 GO:0016866 GO:0019538 GO:0022613 GO:0030490 GO:0031118 GO:0032544 GO:0034470 GO:0034641 GO:0034645 GO:0034660 GO:0042254 GO:0042273 GO:0042274 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PseudoU_synth_2 S4

Protein Analysis

393

Amino Acids

42.74

Weight (kDa)

9.81

Isoelectric Point (pI)

40.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
S4	PF01479	144 - 189	2.3e-12	S4 domain
PseudoU_synth_2	PF00849	207 - 347	7.3e-18	RNA pseudouridylate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009952)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39140 AT2G39140
fragaria_vesca	FvH4_7g18810 FvH4_7g18810 FvH4_7g18810 FvH4_7g18810 FvH4_7g18810 FvH4_7g18810
malus_domestica	MD07G1170000.v1.1
prunus_persica	Prupe.2G208900_v2.0.a1
pyrus_communis	pycom07g16390
rosa_chinensis	RchiOBHm_Chr1g0362601
rosa_laevigata	RLG00000027635
rosa_multiflora	Rmu_sc0005725.1_g000010
rosa_roxburghii	Rroxscaffold_4G00293910
rosa_rugosa	Rorug01G0300000.1
rosa_samantha	Rh1AG308600 Rh1BG272300 Rh1CG289500 Rh1DG302700
rosa_wichuraiana	Rw1G027410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	116
Acc16I	TGCGCA	1 cut(s)	655
Acc36I	ACCTGC	1 cut(s)	116
AccB1I	GGYRCC	3 cut(s)	344, 891, 1157
AccII	CGCG	5 cut(s)	158, 246, 287, 289, 357
AclWI	GGATC	3 cut(s)	245, 548, 1158
AcoI	YGGCCR	2 cut(s)	366, 757
AcsI	RAATTY	2 cut(s)	412, 721
AcuI	CTGAAG	1 cut(s)	1081
AcyI	GRCGYC	3 cut(s)	5, 423, 1158
AfaI	GTAC	5 cut(s)	380, 647, 732, 1032, 1083
AfeI	AGCGCT	1 cut(s)	30
AfiI	CCNNNNNNNGG	6 cut(s)	216, 250, 396, 432, 780, 1167
AgsI	TTSAA	4 cut(s)	145, 692, 703, 840
AjnI	CCWGG	4 cut(s)	201, 233, 297, 556
AluBI	AGCT	5 cut(s)	35, 196, 223, 268, 490
AluI	AGCT	5 cut(s)	35, 196, 223, 268, 490
Alw21I	GWGCWC	1 cut(s)	198
Alw26I	GTCTC	3 cut(s)	302, 414, 595
AlwI	GGATC	3 cut(s)	245, 548, 1158
AlwNI	CAGNNNCTG	1 cut(s)	950
Aor51HI	AGCGCT	1 cut(s)	30
AoxI	GGCC	3 cut(s)	300, 366, 757
ApeKI	GCWGC	8 cut(s)	20, 23, 26, 220, 430, 452, 487, 863
ApoI	RAATTY	2 cut(s)	412, 721
AspLEI	GCGC	6 cut(s)	31, 160, 289, 357, 656, 1160
AsuC2I	CCSGG	2 cut(s)	217, 394
AsuHPI	GGTGA	1 cut(s)	97
AsuNHI	GCTAGC	1 cut(s)	31
BaeGI	GKGCMC	2 cut(s)	347, 363
BanI	GGYRCC	3 cut(s)	344, 891, 1157
BanII	GRGCYC	2 cut(s)	198, 375
BbsI	GAAGAC	2 cut(s)	710, 828
Bbv12I	GWGCWC	1 cut(s)	198
BbvI	GCAGC	8 cut(s)	32, 35, 38, 232, 439, 442, 499, 875
BccI	CCATC	6 cut(s)	92, 311, 494, 797, 911, 920
BceAI	ACGGC	3 cut(s)	271, 381, 744
BcgI	CGANNNNNNTGC	6 cut(s)	188, 222, 430, 464, 586, 620
BciT130I	CCWGG	4 cut(s)	203, 235, 299, 558
BclI	TGATCA	1 cut(s)	786
BcnI	CCSGG	2 cut(s)	217, 394
BcoDI	GTCTC	3 cut(s)	302, 414, 595
BfaI	CTAG	1 cut(s)	32
BfoI	RGCGCY	2 cut(s)	32, 1161
BfuAI	ACCTGC	1 cut(s)	116
BglI	GCCNNNNNGGC	1 cut(s)	464
BglII	AGATCT	1 cut(s)	1111
BlpI	GCTNAGC	1 cut(s)	437
BmcAI	AGTACT	1 cut(s)	380
Bme1390I	CCNGG	6 cut(s)	203, 217, 235, 299, 394, 558
BmiI	GGNNCC	4 cut(s)	346, 893, 1022, 1159
BmrFI	CCNGG	6 cut(s)	203, 217, 235, 299, 394, 558
BmrI	ACTGGG	1 cut(s)	789
BmsI	GCATC	4 cut(s)	196, 476, 665, 930
BmtI	GCTAGC	1 cut(s)	35
BmuI	ACTGGG	1 cut(s)	789
BoxI	GACNNNNGTC	1 cut(s)	1105
BpiI	GAAGAC	2 cut(s)	710, 828
BplI	GAGNNNNNCTC	2 cut(s)	592, 624
BpmI	CTGGAG	2 cut(s)	254, 281
Bpu1102I	GCTNAGC	1 cut(s)	437
BpuEI	CTTGAG	2 cut(s)	248, 1079
BpuMI	CCSGG	2 cut(s)	217, 394
Bsa29I	ATCGAT	1 cut(s)	924
BsaAI	YACGTR	1 cut(s)	1085
BsaHI	GRCGYC	3 cut(s)	5, 423, 1158
BsaI	GGTCTC	1 cut(s)	302
BsaJI	CCNNGG	4 cut(s)	233, 244, 363, 1161
BsaXI	ACNNNNNCTCC	2 cut(s)	466, 496
Bsc4I	CCNNNNNNNGG	6 cut(s)	216, 250, 396, 432, 780, 1167
Bse1I	ACTGG	2 cut(s)	271, 784
Bse3DI	GCAATG	2 cut(s)	858, 934
BseBI	CCWGG	4 cut(s)	203, 235, 299, 558
BseCI	ATCGAT	1 cut(s)	924
BseDI	CCNNGG	4 cut(s)	233, 244, 363, 1161
BseGI	GGATG	5 cut(s)	78, 84, 211, 228, 829
BseLI	CCNNNNNNNGG	6 cut(s)	216, 250, 396, 432, 780, 1167
BseMI	GCAATG	2 cut(s)	858, 934
BseMII	CTCAG	3 cut(s)	149, 451, 830
BseNI	ACTGG	2 cut(s)	271, 784
BseRI	GAGGAG	7 cut(s)	34, 37, 44, 118, 487, 490, 528
BseSI	GKGCMC	2 cut(s)	347, 363
BseX3I	CGGCCG	1 cut(s)	366
BseXI	GCAGC	8 cut(s)	32, 35, 38, 232, 439, 442, 499, 875
Bsh1236I	CGCG	5 cut(s)	158, 246, 287, 289, 357
Bsh1285I	CGRYCG	1 cut(s)	369
BshFI	GGCC	3 cut(s)	302, 368, 759
BshNI	GGYRCC	3 cut(s)	344, 891, 1157
BshVI	ATCGAT	1 cut(s)	924
BsiEI	CGRYCG	1 cut(s)	369
BsiHKAI	GWGCWC	1 cut(s)	198
BsiSI	CCGG	3 cut(s)	216, 394, 459
BslI	CCNNNNNNNGG	6 cut(s)	216, 250, 396, 432, 780, 1167
BsmAI	GTCTC	3 cut(s)	302, 414, 595
BsmBI	CGTCTC	1 cut(s)	414
BsnI	GGCC	3 cut(s)	302, 368, 759
Bso31I	GGTCTC	1 cut(s)	302
Bsp1286I	GDGCHC	4 cut(s)	198, 347, 363, 375
Bsp143I	GATC	5 cut(s)	237, 553, 786, 1111, 1150
Bsp1720I	GCTNAGC	1 cut(s)	437
BspANI	GGCC	3 cut(s)	302, 368, 759
BspCNI	CTCAG	3 cut(s)	148, 450, 829
BspDI	ATCGAT	1 cut(s)	924
BspFNI	CGCG	5 cut(s)	158, 246, 287, 289, 357
BspHI	TCATGA	1 cut(s)	1009
BspLI	GGNNCC	4 cut(s)	346, 893, 1022, 1159
BspMI	ACCTGC	1 cut(s)	116
BspOI	GCTAGC	1 cut(s)	35
BspPI	GGATC	3 cut(s)	245, 548, 1158
BspT107I	GGYRCC	3 cut(s)	344, 891, 1157
BspTNI	GGTCTC	1 cut(s)	302
BsrDI	GCAATG	2 cut(s)	858, 934
BsrI	ACTGG	2 cut(s)	271, 784
BssECI	CCNNGG	4 cut(s)	233, 244, 363, 1161
BssMI	GATC	5 cut(s)	237, 553, 786, 1111, 1150
BssNI	GRCGYC	3 cut(s)	5, 423, 1158
BssT1I	CCWWGG	1 cut(s)	1161
Bst2UI	CCWGG	4 cut(s)	203, 235, 299, 558
Bst4CI	ACNGT	2 cut(s)	514, 754
Bst6I	CTCTTC	2 cut(s)	136, 593
BstACI	GRCGYC	3 cut(s)	5, 423, 1158
BstBAI	YACGTR	1 cut(s)	1085
BstC8I	GCNNGC	2 cut(s)	33, 359
BstDEI	CTNAG	3 cut(s)	135, 437, 816
BstDSI	CCRYGG	2 cut(s)	244, 363
BstF5I	GGATG	5 cut(s)	78, 84, 211, 228, 829
BstFNI	CGCG	5 cut(s)	158, 246, 287, 289, 357
BstH2I	RGCGCY	2 cut(s)	32, 1161
BstHHI	GCGC	6 cut(s)	31, 160, 289, 357, 656, 1160
BstKTI	GATC	5 cut(s)	240, 556, 789, 1114, 1153
BstMAI	GTCTC	3 cut(s)	302, 414, 595
BstMBI	GATC	5 cut(s)	237, 553, 786, 1111, 1150
BstMCI	CGRYCG	1 cut(s)	369
BstNI	CCWGG	4 cut(s)	203, 235, 299, 558
BstPAI	GACNNNNGTC	1 cut(s)	1105
BstSCI	CCNGG	6 cut(s)	201, 215, 233, 297, 392, 556
BstSLI	GKGCMC	2 cut(s)	347, 363
BstSNI	TACGTA	1 cut(s)	1085
BstUI	CGCG	5 cut(s)	158, 246, 287, 289, 357
BstV1I	GCAGC	8 cut(s)	32, 35, 38, 232, 439, 442, 499, 875
BstV2I	GAAGAC	2 cut(s)	710, 828
BstX2I	RGATCY	2 cut(s)	1111, 1150
BstYI	RGATCY	2 cut(s)	1111, 1150
BstZI	CGGCCG	1 cut(s)	366
Bsu15I	ATCGAT	1 cut(s)	924
BsuRI	GGCC	3 cut(s)	302, 368, 759
BsuTUI	ATCGAT	1 cut(s)	924
BtgI	CCRYGG	2 cut(s)	244, 363
BtsCI	GGATG	5 cut(s)	78, 84, 211, 228, 829
BtsI	GCAGTG	1 cut(s)	487
BtsIMutI	CAGTG	3 cut(s)	487, 510, 913
BveI	ACCTGC	1 cut(s)	116
Cac8I	GCNNGC	2 cut(s)	33, 359
CaiI	CAGNNNCTG	1 cut(s)	950
CciI	TCATGA	1 cut(s)	1009
CfoI	GCGC	6 cut(s)	31, 160, 289, 357, 656, 1160
Cfr42I	CCGCGG	1 cut(s)	247
ClaI	ATCGAT	1 cut(s)	924
CseI	GACGC	1 cut(s)	431
Csp6I	GTAC	5 cut(s)	379, 646, 731, 1031, 1082
CviAII	CATG	3 cut(s)	1010, 1025, 1132
CviQI	GTAC	5 cut(s)	379, 646, 731, 1031, 1082
DdeI	CTNAG	3 cut(s)	135, 437, 816
DinI	GGCGCC	1 cut(s)	1159
DpnI	GATC	5 cut(s)	239, 555, 788, 1113, 1152
DpnII	GATC	5 cut(s)	237, 553, 786, 1111, 1150
EaeI	YGGCCR	2 cut(s)	366, 757
EagI	CGGCCG	1 cut(s)	366
Eam1104I	CTCTTC	2 cut(s)	136, 593
EarI	CTCTTC	2 cut(s)	136, 593
EciI	GGCGGA	1 cut(s)	178
Ecl136II	GAGCTC	1 cut(s)	196
EclXI	CGGCCG	1 cut(s)	366
Eco105I	TACGTA	1 cut(s)	1085
Eco130I	CCWWGG	1 cut(s)	1161
Eco24I	GRGCYC	2 cut(s)	198, 375
Eco31I	GGTCTC	1 cut(s)	302
Eco32I	GATATC	1 cut(s)	825
Eco47III	AGCGCT	1 cut(s)	30
Eco52I	CGGCCG	1 cut(s)	366
Eco53kI	GAGCTC	1 cut(s)	196
Eco57I	CTGAAG	1 cut(s)	1081
EcoICRI	GAGCTC	1 cut(s)	196
EcoRII	CCWGG	4 cut(s)	201, 233, 297, 556
EcoRV	GATATC	1 cut(s)	825
EcoT14I	CCWWGG	1 cut(s)	1161
EcoT38I	GRGCYC	2 cut(s)	198, 375
EgeI	GGCGCC	1 cut(s)	1159
EheI	GGCGCC	1 cut(s)	1159
ErhI	CCWWGG	1 cut(s)	1161
Esp3I	CGTCTC	1 cut(s)	414
FaeI	CATG	3 cut(s)	1013, 1028, 1135
FaiI	YATR	8 cut(s)	572, 574, 576, 980, 1011, 1026, 1088, 1133
FalI	AAGNNNNNCTT	2 cut(s)	1137, 1169
FatI	CATG	3 cut(s)	1009, 1024, 1131
FauI	CCCGC	2 cut(s)	107, 292
FbaI	TGATCA	1 cut(s)	786
FokI	GGATG	5 cut(s)	65, 71, 215, 218, 816
FriOI	GRGCYC	2 cut(s)	198, 375
FspBI	CTAG	1 cut(s)	32
FspI	TGCGCA	1 cut(s)	655
GlaI	GCGC	6 cut(s)	30, 159, 288, 356, 655, 1159
GsuI	CTGGAG	2 cut(s)	254, 281
HaeII	RGCGCY	2 cut(s)	32, 1161
HaeIII	GGCC	3 cut(s)	302, 368, 759
HapII	CCGG	3 cut(s)	216, 394, 459
HgaI	GACGC	1 cut(s)	431
HhaI	GCGC	6 cut(s)	31, 160, 289, 357, 656, 1160
Hin1I	GRCGYC	3 cut(s)	5, 423, 1158
Hin1II	CATG	3 cut(s)	1013, 1028, 1135
Hin6I	GCGC	6 cut(s)	29, 158, 287, 355, 654, 1158
HinP1I	GCGC	6 cut(s)	29, 158, 287, 355, 654, 1158
HincII	GTYRAC	1 cut(s)	580
HindII	GTYRAC	1 cut(s)	580
HinfI	GANTC	3 cut(s)	185, 592, 947
HpaII	CCGG	3 cut(s)	216, 394, 459
HphI	GGTGA	1 cut(s)	97
Hpy166II	GTNNAC	2 cut(s)	580, 1082
Hpy188I	TCNGA	6 cut(s)	419, 591, 597, 819, 1100, 1111
Hpy188III	TCNNGA	5 cut(s)	137, 307, 726, 764, 1010
Hpy8I	GTNNAC	2 cut(s)	580, 1082
Hpy99I	CGWCG	1 cut(s)	10
HpyAV	CCTTC	5 cut(s)	331, 499, 555, 866, 1007
HpyCH4III	ACNGT	2 cut(s)	514, 754
HpyCH4IV	ACGT	1 cut(s)	1084
HpyCH4V	TGCA	3 cut(s)	531, 863, 939
HpyF3I	CTNAG	3 cut(s)	135, 437, 816
HpySE526I	ACGT	1 cut(s)	1084
Hsp92I	GRCGYC	3 cut(s)	5, 423, 1158
Hsp92II	CATG	3 cut(s)	1013, 1028, 1135
HspAI	GCGC	6 cut(s)	29, 158, 287, 355, 654, 1158
KasI	GGCGCC	1 cut(s)	1157
Ksp22I	TGATCA	1 cut(s)	786
KspI	CCGCGG	1 cut(s)	247
Kzo9I	GATC	5 cut(s)	237, 553, 786, 1111, 1150
LmnI	GCTCC	4 cut(s)	17, 116, 273, 477
Lsp1109I	GCAGC	8 cut(s)	32, 35, 38, 232, 439, 442, 499, 875
LweI	GCATC	4 cut(s)	196, 476, 665, 930
MaeI	CTAG	1 cut(s)	32
MaeII	ACGT	1 cut(s)	1084
MaeIII	GTNAC	2 cut(s)	508, 793
MalI	GATC	5 cut(s)	239, 555, 788, 1113, 1152
MboI	GATC	5 cut(s)	237, 553, 786, 1111, 1150
MboII	GAAGA	8 cut(s)	123, 343, 346, 610, 704, 715, 828, 832
MflI	RGATCY	2 cut(s)	1111, 1150
MhlI	GDGCHC	4 cut(s)	198, 347, 363, 375
MluCI	AATT	3 cut(s)	412, 721, 956
Mly113I	GGCGCC	1 cut(s)	1158
MlyI	GAGTC	1 cut(s)	179
MmeI	TCCRAC	1 cut(s)	1148
MseI	TTAA	3 cut(s)	630, 1044, 1139
MspA1I	CMGCKG	2 cut(s)	246, 433
MspI	CCGG	3 cut(s)	216, 394, 459
MspR9I	CCNGG	6 cut(s)	203, 217, 235, 299, 394, 558
MvaI	CCWGG	4 cut(s)	203, 235, 299, 558
MvnI	CGCG	5 cut(s)	158, 246, 287, 289, 357
NarI	GGCGCC	1 cut(s)	1158
NciI	CCSGG	2 cut(s)	217, 394
NdeII	GATC	5 cut(s)	237, 553, 786, 1111, 1150
NheI	GCTAGC	1 cut(s)	31
NlaIII	CATG	3 cut(s)	1013, 1028, 1135
NlaIV	GGNNCC	4 cut(s)	346, 893, 1022, 1159
NmeAIII	GCCGAG	3 cut(s)	217, 394, 451
NmuCI	GTSAC	2 cut(s)	508, 793
NsbI	TGCGCA	1 cut(s)	655
PagI	TCATGA	1 cut(s)	1009
PaqCI	CACCTGC	1 cut(s)	116
PcsI	WCGNNNNNNNCGW	1 cut(s)	246
PfeI	GAWTC	2 cut(s)	592, 947
PfoI	TCCNGGA	1 cut(s)	556
PleI	GAGTC	1 cut(s)	179
PluTI	GGCGCC	1 cut(s)	1161
PpsI	GAGTC	1 cut(s)	179
Ppu21I	YACGTR	1 cut(s)	1085
PshAI	GACNNNNGTC	1 cut(s)	1105
Psp124BI	GAGCTC	1 cut(s)	198
Psp6I	CCWGG	4 cut(s)	201, 233, 297, 556
PspGI	CCWGG	4 cut(s)	201, 233, 297, 556
PspN4I	GGNNCC	4 cut(s)	346, 893, 1022, 1159
PstNI	CAGNNNCTG	1 cut(s)	950
PsuI	RGATCY	2 cut(s)	1111, 1150
RsaI	GTAC	5 cut(s)	380, 647, 732, 1032, 1083
RsaNI	GTAC	5 cut(s)	379, 646, 731, 1031, 1082
SacI	GAGCTC	1 cut(s)	198
SacII	CCGCGG	1 cut(s)	247
SaqAI	TTAA	3 cut(s)	630, 1044, 1139
Sau3AI	GATC	5 cut(s)	237, 553, 786, 1111, 1150
ScaI	AGTACT	1 cut(s)	380
SchI	GAGTC	1 cut(s)	179
ScrFI	CCNGG	6 cut(s)	203, 217, 235, 299, 394, 558
SduI	GDGCHC	4 cut(s)	198, 347, 363, 375
SfaNI	GCATC	4 cut(s)	196, 476, 665, 930
SfoI	GGCGCC	1 cut(s)	1159
Sfr303I	CCGCGG	1 cut(s)	247
SgrBI	CCGCGG	1 cut(s)	247
SmlI	CTYRAG	2 cut(s)	263, 1058
SmoI	CTYRAG	2 cut(s)	263, 1058
SnaBI	TACGTA	1 cut(s)	1085
Sse9I	AATT	3 cut(s)	412, 721, 956
SspDI	GGCGCC	1 cut(s)	1157
SspMI	CTAG	1 cut(s)	32
SstI	GAGCTC	1 cut(s)	198
StyD4I	CCNGG	6 cut(s)	201, 215, 233, 297, 392, 556
StyI	CCWWGG	1 cut(s)	1161
TaaI	ACNGT	2 cut(s)	514, 754
TaiI	ACGT	1 cut(s)	1087
TaqI	TCGA	5 cut(s)	198, 306, 383, 470, 924
TasI	AATT	3 cut(s)	412, 721, 956
TatI	WGTACW	1 cut(s)	378
TauI	GCSGC	5 cut(s)	249, 392, 436, 458, 892
TfiI	GAWTC	2 cut(s)	592, 947
Tru1I	TTAA	3 cut(s)	630, 1044, 1139
Tru9I	TTAA	3 cut(s)	630, 1044, 1139
TscAI	CASTG	3 cut(s)	487, 517, 913
TseFI	GTSAC	2 cut(s)	508, 793
TseI	GCWGC	8 cut(s)	20, 23, 26, 220, 430, 452, 487, 863
Tsp45I	GTSAC	2 cut(s)	508, 793
TspDTI	ATGAA	3 cut(s)	998, 1026, 1041
TspGWI	ACGGA	3 cut(s)	597, 822, 1095
TspRI	CASTG	3 cut(s)	487, 517, 913
XapI	RAATTY	2 cut(s)	412, 721
XspI	CTAG	1 cut(s)	32
ZrmI	AGTACT	1 cut(s)	380

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.