MD08G1044800.v1.1

Crooked neck-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0019185
Physical Location & Seq
Forward (+)
3406030 .. 3408114
2085 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1044800.v1.1.491

Sequence Viewer

Length: 2085 bp
ATGGCGAAGGACAACAATGGCTACAAGGACACCGATGACAAGCTGCTGCGGGCGAAAAGGGTTAAGAACAAAGCCCCAGCCCCGGTCCAAATCACCGCAGAGCAACTCCTCCGCGAGGCGCGTGAGGGTCAGGAGGGTGAAATCCGTCCTCCCCAACAGCAAATAAATGACGCTACCGAGCTCGCTAATTTTCACCTCCGAATGCGCAAGGGATTCGAGGACCAAGTCCGGCGCCAGAAGCGGAATGCCCGCGTCTGGATCAAGTATGCTCGGTGGGAGGAGTCCCAGAAGGAATTGGACCGTGCACGCTCTGTTTGGGAGCGGCTGCTTGATGTAGATTATCGAAACCACACCGTCTGGGTCGAGTATGCCACGATGGAGATGAAGAATAAGATGATCAACCATGCGAGGAATGTGTGGGAGCGTGCTGTGCAACTCTTGCCGAGGGTGGATCAGCTCTGGTACAAATATATTCACATGAAGGAGATGATAGGGAATGCAGCTCGTGCTCGGGAAATATTTCGGAGGTGGATGGATTGGATGCCGGACCAGCAAGGCTGGATCAAATTCATCGAGTTTGAGCTTCGGTATAATGAAGTATATCACGCGAGAGCGATTTTTGAGCAGTTCGTACAATGTCATCCAAAAGCTGACGCTTGGATTCGGTATGCCAAGTTTGAGATGAAGAATGGTGACGTTGCAAGGGTAAGGGATGTGTATCAGACGGCAGTGGATGTGGTAGACAATGAGGAGGAGGAGGCCGAACGGTTGTTTCTGGCTTCTGCTGAATTTGAAGAAGGGTGCAAAGAAATTGAGCGTGCAAGGAGTATTTATAAGTTAGGGCGTGATCGTATACCAAAAGGAAAGGCTGATTCTTTGTATAGGATGTTCGAGGAATTTGAGGAGCGTTATGGGGACAGACAAGGGATCGAGGATGCAATTGTGAACAAGGCAAGGTTCAAGTACGAGCAGGAGGTTAGGAAGAATCCTTTGGATTATGATGCCTGGTTCGGTTATACAAGGCTAGAAGAAAATGCAGGGAACAAGGAGAAGATTAGACAAGTTTATGATCGAGCGATTGCCAATGTACCACCGGCTCAAGAAAAGCGGTATTGGAAGCGCTACATTTATCTATGGATCAACTATGCACTGTATGAGGAGATTGATGCTCGCGATGAGGACCATGCACGCGCTGTCTATATAATGTGCCTTGAACTGATTCCTCATAAGAAGTTTACATTTGCAAAAATGTGGATTCTCGCTGCCGAGTTTGAGATCCGACAACTGAAACTCGAGTCTGCACGTAAGATACTTGGTACTGCAATTGGCAAGGCAGCTAAAGGCAAGATATTTAAGAGGTACATTGAGATTGAGTGGCAACTACGTAATGCTGATCGCTGTCGGAAACTGTATGCAGAGTTTGAGGAAAATTCCTATGCGTGGATCAGTTATGCAGAGTTTGAGGAAAAAAATTGCGACGCGGAACGAGCCAGATCAGTTTATGAACTTGCCATCAGCCAAAAACAACTCGACAAGCCCGAATTGCTGTGGAAGTCATATATCGACTTTGAACTAGCAGAGAGAGAGTTTGAGAGAGCTAGAGATCTGTACGGGCGACTCTTAGAACGGACCCAACACGTTAAAGTCTGGATCAGTTACGCAGCATTCGAGGCATCGGCTATGGTGGGAGGAGACGGAATGCGCTCAAAAGATGTTATTGAGCAAAAGGAACAATGCATTCAGCGCGCCAGAAGGGTTTTCGAGAGAGCGTCGGACTATTTTCGAACTTCAGCGTCGGAACTTAAGGAACAAAGAAGTATGCTGCTAGAACAATGGCGGAACACGGAGGAGGAGTTTGGGGATTTCGGTGATGTTACGTTAGTGCAAGCGAAGCTGCCGCGGAGATTGAAGAGGAAGAGGCCAATAGTTGTTGAAGATGGTGGTTCTGCTGGGTTTGAAGAATACATTGATTATCTTTTTCCAGAAGAAGCTCTTAACACGAACTGGAAGCTTTTCGAAGCTGCCTACCATTGGAAGAGGCGAAAAGATTCTTCTGCGGAGGATGGGGAAGATAAAGAAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
HAT Suf TPR_8

Protein Analysis

695

Amino Acids

83.26

Weight (kDa)

7.16

Isoelectric Point (pI)

49.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HAT_Syf1_CNRKL1_N PF23233 72 - 216 7.5e-14 Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_Syf1_CNRKL1_C PF23231 73 - 309 1.8e-20 Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
HAT_PRP39_C PF23241 79 - 183 5.3e-11 PRP39 C-terminal HAT repeat
HAT_PRP39_N PF23240 166 - 299 3.3e-08 PRP39 N-terminal HAT repeat
HAT_PRP39_C PF23241 185 - 287 1.4e-11 PRP39 C-terminal HAT repeat
HAT PF02184 199 - 227 4.1e-07 HAT (Half-A-TPR) repeat
HAT_PRP39_N PF23240 315 - 441 2.8e-06 PRP39 N-terminal HAT repeat
HAT_Syf1_CNRKL1_N PF23233 320 - 442 9.4e-09 Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_N PF23240 451 - 543 6.9e-07 PRP39 N-terminal HAT repeat
HAT_PRP39_C PF23241 508 - 616 7e-07 PRP39 C-terminal HAT repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0019185)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G51110
malus_domestica MD08G1044800.v1.1 MD08G1045500.v1.1
pyrus_communis pycom08g03610 pycom08g03630 pycom08g03750 pycom08g03760
rosa_samantha Rh5BG087000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 834
Acc16I TGCGCA 1 cut(s) 206
AccB1I GGYRCC 1 cut(s) 231
AccBSI CCGCTC 1 cut(s) 322
AccI GTMKAC 2 cut(s) 741, 853
AccII CGCG 9 cut(s) 114, 121, 252, 608, 1173, 1191, 1481, 1746, 1900
AclWI GGATC 8 cut(s) 266, 459, 569, 935, 1145, 1270, 1451, 1658
AcsI RAATTY 4 cut(s) 566, 788, 896, 1429
AcuI CTGAAG 1 cut(s) 1773
AcyI GRCGYC 1 cut(s) 232
AfaI GTAC 7 cut(s) 464, 633, 965, 1089, 1318, 1361, 1610
AfeI AGCGCT 1 cut(s) 1121
AfiI CCNNNNNNNGG 5 cut(s) 82, 115, 255, 1440, 2031
AflII CTTAAG 1 cut(s) 1802
AflIII ACRYGT 1 cut(s) 1636
AgsI TTSAA 7 cut(s) 794, 961, 1214, 1571, 1909, 1934, 1958
AjnI CCWGG 1 cut(s) 1004
AjuI GAANNNNNNNTTGG 2 cut(s) 974, 1006
Alw21I GWGCWC 3 cut(s) 183, 307, 511
Alw26I GTCTC 1 cut(s) 1686
Alw44I GTGCAC 1 cut(s) 303
AlwI GGATC 8 cut(s) 266, 459, 569, 935, 1145, 1270, 1451, 1658
Ama87I CYCGRG 2 cut(s) 510, 1292
Aor51HI AGCGCT 1 cut(s) 1121
AoxI GGCC 2 cut(s) 759, 1919
ApaLI GTGCAC 1 cut(s) 303
ApoI RAATTY 4 cut(s) 566, 788, 896, 1429
Asp700I GAANNNNTTC 4 cut(s) 519, 1218, 2012, 2047
AspLEI GCGC 8 cut(s) 121, 207, 234, 1122, 1193, 1704, 1746, 1748
AspS9I GGNCC 6 cut(s) 85, 220, 298, 547, 1180, 1629
AsuC2I CCSGG 1 cut(s) 83
AsuHPI GGTGA 5 cut(s) 85, 149, 185, 704, 1880
AsuII TTCGAA 2 cut(s) 1783, 2016
AvaI CYCGRG 2 cut(s) 510, 1292
AvaII GGWCC 6 cut(s) 85, 220, 298, 547, 1180, 1629
BaeGI GKGCMC 1 cut(s) 307
BanI GGYRCC 1 cut(s) 231
BanII GRGCYC 1 cut(s) 183
BauI CACGAG 1 cut(s) 504
Bbv12I GWGCWC 3 cut(s) 183, 307, 511
BccI CCATC 5 cut(s) 370, 526, 1520, 1931, 2057
BceAI ACGGC 1 cut(s) 741
BcgI CGANNNNNNTGC 2 cut(s) 196, 230
BciT130I CCWGG 1 cut(s) 1006
BclI TGATCA 1 cut(s) 396
BcnI CCSGG 1 cut(s) 83
BcoDI GTCTC 1 cut(s) 1686
BfaI CTAG 4 cut(s) 1025, 1574, 1599, 1826
BfoI RGCGCY 2 cut(s) 235, 1123
BfrI CTTAAG 1 cut(s) 1802
BglII AGATCT 1 cut(s) 1603
Bme1390I CCNGG 2 cut(s) 83, 1006
Bme18I GGWCC 6 cut(s) 85, 220, 298, 547, 1180, 1629
BmeT110I CYCGRG 2 cut(s) 510, 1292
BmgT120I GGNCC 6 cut(s) 85, 220, 298, 547, 1180, 1629
BmiI GGNNCC 2 cut(s) 233, 1631
BmrFI CCNGG 2 cut(s) 83, 1006
BmsI GCATC 5 cut(s) 531, 925, 991, 1156, 1682
Bpu14I TTCGAA 2 cut(s) 1783, 2016
BpuEI CTTGAG 1 cut(s) 1083
BpuMI CCSGG 1 cut(s) 83
BsaAI YACGTR 2 cut(s) 1304, 1385
BsaBI GATNNNNATC 1 cut(s) 717
BsaHI GRCGYC 1 cut(s) 232
BsaJI CCNNGG 3 cut(s) 81, 443, 1898
BsaXI ACNNNNNCTCC 2 cut(s) 1838, 1868
Bsc4I CCNNNNNNNGG 5 cut(s) 82, 115, 255, 1440, 2031
Bse118I RCCGGY 1 cut(s) 1093
Bse1I ACTGG 1 cut(s) 2009
Bse8I GATNNNNATC 1 cut(s) 717
BseBI CCWGG 1 cut(s) 1006
BseDI CCNNGG 3 cut(s) 81, 443, 1898
BseGI GGATG 8 cut(s) 537, 546, 640, 718, 739, 891, 940, 2068
BseJI GATNNNNATC 1 cut(s) 717
BseLI CCNNNNNNNGG 5 cut(s) 82, 115, 255, 1440, 2031
BseNI ACTGG 1 cut(s) 2009
BsePI GCGCGC 1 cut(s) 1744
BseSI GKGCMC 1 cut(s) 307
BseYI CCCAGC 2 cut(s) 76, 1949
BsgI GTGCAG 1 cut(s) 1284
Bsh1236I CGCG 9 cut(s) 114, 121, 252, 608, 1173, 1191, 1481, 1746, 1900
BshFI GGCC 2 cut(s) 761, 1921
BshNI GGYRCC 1 cut(s) 231
BsiHKAI GWGCWC 3 cut(s) 183, 307, 511
BsiHKCI CYCGRG 2 cut(s) 510, 1292
BsiSI CCGG 4 cut(s) 83, 229, 545, 1094
BslFI GGGAC 2 cut(s) 268, 929
BslI CCNNNNNNNGG 5 cut(s) 82, 115, 255, 1440, 2031
BsmAI GTCTC 1 cut(s) 1686
BsmBI CGTCTC 1 cut(s) 1686
BsmFI GGGAC 2 cut(s) 268, 929
BsmI GAATGC 6 cut(s) 207, 250, 502, 1664, 1704, 1737
BsnI GGCC 2 cut(s) 761, 1921
BsoBI CYCGRG 2 cut(s) 510, 1292
Bsp119I TTCGAA 2 cut(s) 1783, 2016
Bsp1286I GDGCHC 3 cut(s) 183, 307, 511
Bsp68I TCGCGA 1 cut(s) 1173
BspANI GGCC 2 cut(s) 761, 1921
BspFNI CGCG 9 cut(s) 114, 121, 252, 608, 1173, 1191, 1481, 1746, 1900
BspLI GGNNCC 2 cut(s) 233, 1631
BspPI GGATC 8 cut(s) 266, 459, 569, 935, 1145, 1270, 1451, 1658
BspT104I TTCGAA 2 cut(s) 1783, 2016
BspT107I GGYRCC 1 cut(s) 231
BspTI CTTAAG 1 cut(s) 1802
BsrBI CCGCTC 1 cut(s) 322
BsrFI RCCGGY 1 cut(s) 1093
BsrI ACTGG 1 cut(s) 2009
BssAI RCCGGY 1 cut(s) 1093
BssECI CCNNGG 3 cut(s) 81, 443, 1898
BssHII GCGCGC 1 cut(s) 1744
BssNAI GTATAC 1 cut(s) 854
BssNI GRCGYC 1 cut(s) 232
BssSI CACGAG 1 cut(s) 504
Bst1107I GTATAC 1 cut(s) 854
Bst2BI CACGAG 1 cut(s) 504
Bst2UI CCWGG 1 cut(s) 1006
Bst4CI ACNGT 5 cut(s) 302, 355, 768, 1152, 1410
Bst6I CTCTTC 3 cut(s) 1904, 1910, 2030
BstACI GRCGYC 1 cut(s) 232
BstAFI CTTAAG 1 cut(s) 1802
BstAPI GCANNNNNTGC 2 cut(s) 439, 506
BstBAI YACGTR 2 cut(s) 1304, 1385
BstBI TTCGAA 2 cut(s) 1783, 2016
BstDEI CTNAG 1 cut(s) 1621
BstDSI CCRYGG 1 cut(s) 1898
BstENI CCTNNNNNAGG 1 cut(s) 113
BstF5I GGATG 8 cut(s) 537, 546, 640, 718, 739, 891, 940, 2068
BstFNI CGCG 9 cut(s) 114, 121, 252, 608, 1173, 1191, 1481, 1746, 1900
BstH2I RGCGCY 2 cut(s) 235, 1123
BstHHI GCGC 8 cut(s) 121, 207, 234, 1122, 1193, 1704, 1746, 1748
BstMAI GTCTC 1 cut(s) 1686
BstNI CCWGG 1 cut(s) 1006
BstSCI CCNGG 2 cut(s) 81, 1004
BstSLI GKGCMC 1 cut(s) 307
BstSNI TACGTA 1 cut(s) 1385
BstUI CGCG 9 cut(s) 114, 121, 252, 608, 1173, 1191, 1481, 1746, 1900
BstX2I RGATCY 2 cut(s) 1275, 1603
BstYI RGATCY 2 cut(s) 1275, 1603
BstZ17I GTATAC 1 cut(s) 854
BsuRI GGCC 2 cut(s) 761, 1921
BtgI CCRYGG 1 cut(s) 1898
BtgZI GCGATG 1 cut(s) 1188
BtsCI GGATG 8 cut(s) 537, 546, 640, 718, 739, 891, 940, 2068
BtsI GCAGTG 1 cut(s) 735
BtsIMutI CAGTG 2 cut(s) 735, 1148
BtuMI TCGCGA 1 cut(s) 1173
CfoI GCGC 8 cut(s) 121, 207, 234, 1122, 1193, 1704, 1746, 1748
Cfr10I RCCGGY 1 cut(s) 1093
Cfr13I GGNCC 6 cut(s) 85, 220, 298, 547, 1180, 1629
Cfr42I CCGCGG 1 cut(s) 1901
CseI GACGC 6 cut(s) 179, 241, 662, 1487, 1758, 1782
Csp6I GTAC 7 cut(s) 463, 632, 964, 1088, 1317, 1360, 1609
CviAII CATG 3 cut(s) 404, 478, 1184
CviQI GTAC 7 cut(s) 463, 632, 964, 1088, 1317, 1360, 1609
DdeI CTNAG 1 cut(s) 1621
DinI GGCGCC 1 cut(s) 233
Eam1104I CTCTTC 3 cut(s) 1904, 1910, 2030
EarI CTCTTC 3 cut(s) 1904, 1910, 2030
EciI GGCGGA 1 cut(s) 1852
Ecl136II GAGCTC 1 cut(s) 181
Eco105I TACGTA 1 cut(s) 1385
Eco24I GRGCYC 1 cut(s) 183
Eco47I GGWCC 6 cut(s) 85, 220, 298, 547, 1180, 1629
Eco47III AGCGCT 1 cut(s) 1121
Eco53kI GAGCTC 1 cut(s) 181
Eco57I CTGAAG 1 cut(s) 1773
Eco88I CYCGRG 2 cut(s) 510, 1292
EcoICRI GAGCTC 1 cut(s) 181
EcoNI CCTNNNNNAGG 1 cut(s) 113
EcoRII CCWGG 1 cut(s) 1004
EcoT22I ATGCAT 1 cut(s) 1739
EcoT38I GRGCYC 1 cut(s) 183
EgeI GGCGCC 1 cut(s) 233
EheI GGCGCC 1 cut(s) 233
Esp3I CGTCTC 1 cut(s) 1686
FaeI CATG 3 cut(s) 407, 481, 1187
FalI AAGNNNNNCTT 2 cut(s) 1977, 2009
FaqI GGGAC 2 cut(s) 268, 929
FatI CATG 3 cut(s) 403, 477, 1183
FauI CCCGC 2 cut(s) 42, 257
FbaI TGATCA 1 cut(s) 396
FblI GTMKAC 2 cut(s) 741, 853
FokI GGATG 8 cut(s) 544, 553, 627, 725, 746, 898, 947, 2075
FriOI GRGCYC 1 cut(s) 183
FspBI CTAG 4 cut(s) 1025, 1574, 1599, 1826
FspI TGCGCA 1 cut(s) 206
GlaI GCGC 8 cut(s) 120, 206, 233, 1121, 1192, 1703, 1745, 1747
GsaI CCCAGC 2 cut(s) 80, 1953
HaeII RGCGCY 2 cut(s) 235, 1123
HaeIII GGCC 2 cut(s) 761, 1921
HapII CCGG 4 cut(s) 83, 229, 545, 1094
HgaI GACGC 6 cut(s) 179, 241, 662, 1487, 1758, 1782
HhaI GCGC 8 cut(s) 121, 207, 234, 1122, 1193, 1704, 1746, 1748
Hin1I GRCGYC 1 cut(s) 232
Hin1II CATG 3 cut(s) 407, 481, 1187
Hin6I GCGC 8 cut(s) 119, 205, 232, 1120, 1191, 1702, 1744, 1746
HinP1I GCGC 8 cut(s) 119, 205, 232, 1120, 1191, 1702, 1744, 1746
HindIII AAGCTT 1 cut(s) 2009
HpaII CCGG 4 cut(s) 83, 229, 545, 1094
HphI GGTGA 5 cut(s) 85, 149, 185, 704, 1880
Hpy166II GTNNAC 5 cut(s) 305, 742, 854, 946, 1236
Hpy188I TCNGA 7 cut(s) 200, 525, 723, 1280, 1404, 1774, 1798
Hpy188III TCNNGA 8 cut(s) 131, 256, 512, 1100, 1172, 1648, 1762, 1982
Hpy8I GTNNAC 5 cut(s) 305, 742, 854, 946, 1236
Hpy99I CGWCG 3 cut(s) 1481, 1774, 1798
HpyAV CCTTC 4 cut(s) 283, 475, 791, 1746
HpyCH4III ACNGT 5 cut(s) 302, 355, 768, 1152, 1410
HpyCH4IV ACGT 5 cut(s) 696, 1303, 1384, 1638, 1877
HpyF3I CTNAG 1 cut(s) 1621
HpySE526I ACGT 5 cut(s) 696, 1303, 1384, 1638, 1877
Hsp92I GRCGYC 1 cut(s) 232
Hsp92II CATG 3 cut(s) 407, 481, 1187
HspAI GCGC 8 cut(s) 119, 205, 232, 1120, 1191, 1702, 1744, 1746
KasI GGCGCC 1 cut(s) 231
Ksp22I TGATCA 1 cut(s) 396
KspI CCGCGG 1 cut(s) 1901
LmnI GCTCC 3 cut(s) 319, 421, 904
LweI GCATC 5 cut(s) 531, 925, 991, 1156, 1682
MaeI CTAG 4 cut(s) 1025, 1574, 1599, 1826
MaeII ACGT 5 cut(s) 696, 1303, 1384, 1638, 1877
MaeIII GTNAC 3 cut(s) 692, 1655, 1873
MbiI CCGCTC 1 cut(s) 322
MfeI CAATTG 2 cut(s) 939, 1323
MflI RGATCY 2 cut(s) 1275, 1603
MhlI GDGCHC 3 cut(s) 183, 307, 511
Mly113I GGCGCC 1 cut(s) 232
MlyI GAGTC 3 cut(s) 290, 1304, 1611
MmeI TCCRAC 4 cut(s) 1303, 1382, 1752, 1776
Mph1103I ATGCAT 1 cut(s) 1739
MroXI GAANNNNTTC 4 cut(s) 519, 1218, 2012, 2047
MseI TTAA 5 cut(s) 63, 1353, 1641, 1803, 1995
MspA1I CMGCKG 1 cut(s) 1900
MspCI CTTAAG 1 cut(s) 1802
MspI CCGG 4 cut(s) 83, 229, 545, 1094
MspR9I CCNGG 2 cut(s) 83, 1006
MunI CAATTG 2 cut(s) 939, 1323
Mva1269I GAATGC 6 cut(s) 207, 250, 502, 1664, 1704, 1737
MvaI CCWGG 1 cut(s) 1006
MvnI CGCG 9 cut(s) 114, 121, 252, 608, 1173, 1191, 1481, 1746, 1900
NarI GGCGCC 1 cut(s) 232
NciI CCSGG 1 cut(s) 83
NlaIII CATG 3 cut(s) 407, 481, 1187
NlaIV GGNNCC 2 cut(s) 233, 1631
NmeAIII GCCGAG 2 cut(s) 468, 1291
NmuCI GTSAC 1 cut(s) 692
NruI TCGCGA 1 cut(s) 1173
NsbI TGCGCA 1 cut(s) 206
NsiI ATGCAT 1 cut(s) 1739
NspV TTCGAA 2 cut(s) 1783, 2016
PaeR7I CTCGAG 1 cut(s) 1292
PauI GCGCGC 1 cut(s) 1744
PcsI WCGNNNNNNNCGW 2 cut(s) 1536, 1665
PctI GAATGC 6 cut(s) 207, 250, 502, 1664, 1704, 1737
PdmI GAANNNNTTC 4 cut(s) 519, 1218, 2012, 2047
PfeI GAWTC 7 cut(s) 213, 661, 872, 985, 1219, 1255, 2048
PflFI GACNNNGTC 1 cut(s) 224
PleI GAGTC 3 cut(s) 289, 1303, 1611
PluTI GGCGCC 1 cut(s) 235
PpsI GAGTC 3 cut(s) 289, 1303, 1611
Ppu21I YACGTR 2 cut(s) 1304, 1385
PsiI TTATAA 1 cut(s) 834
Psp124BI GAGCTC 1 cut(s) 183
Psp6I CCWGG 1 cut(s) 1004
PspFI CCCAGC 2 cut(s) 76, 1949
PspGI CCWGG 1 cut(s) 1004
PspN4I GGNNCC 2 cut(s) 233, 1631
PspPI GGNCC 6 cut(s) 85, 220, 298, 547, 1180, 1629
PspXI VCTCGAGB 1 cut(s) 1292
PsrI GAACNNNNNNTAC 2 cut(s) 872, 904
PsuI RGATCY 2 cut(s) 1275, 1603
PsyI GACNNNGTC 1 cut(s) 224
PteI GCGCGC 1 cut(s) 1744
RruI TCGCGA 1 cut(s) 1173
RsaI GTAC 7 cut(s) 464, 633, 965, 1089, 1318, 1361, 1610
RsaNI GTAC 7 cut(s) 463, 632, 964, 1088, 1317, 1360, 1609
SacI GAGCTC 1 cut(s) 183
SacII CCGCGG 1 cut(s) 1901
SaqAI TTAA 5 cut(s) 63, 1353, 1641, 1803, 1995
Sau96I GGNCC 6 cut(s) 85, 220, 298, 547, 1180, 1629
SchI GAGTC 3 cut(s) 290, 1304, 1611
ScrFI CCNGG 2 cut(s) 83, 1006
SduI GDGCHC 3 cut(s) 183, 307, 511
SfaNI GCATC 5 cut(s) 531, 925, 991, 1156, 1682
SfoI GGCGCC 1 cut(s) 233
Sfr274I CTCGAG 1 cut(s) 1292
Sfr303I CCGCGG 1 cut(s) 1901
SfuI TTCGAA 2 cut(s) 1783, 2016
SgrBI CCGCGG 1 cut(s) 1901
SinI GGWCC 6 cut(s) 85, 220, 298, 547, 1180, 1629
SlaI CTCGAG 1 cut(s) 1292
SmlI CTYRAG 3 cut(s) 1098, 1292, 1802
SmoI CTYRAG 3 cut(s) 1098, 1292, 1802
SnaBI TACGTA 1 cut(s) 1385
SspDI GGCGCC 1 cut(s) 231
SspI AATATT 1 cut(s) 519
SspMI CTAG 4 cut(s) 1025, 1574, 1599, 1826
SstI GAGCTC 1 cut(s) 183
StyD4I CCNGG 2 cut(s) 81, 1004
TaaI ACNGT 5 cut(s) 302, 355, 768, 1152, 1410
TaiI ACGT 5 cut(s) 699, 1306, 1387, 1641, 1880
TauI GCSGC 2 cut(s) 325, 1900
TfiI GAWTC 7 cut(s) 213, 661, 872, 985, 1219, 1255, 2048
Tru1I TTAA 5 cut(s) 63, 1353, 1641, 1803, 1995
Tru9I TTAA 5 cut(s) 63, 1353, 1641, 1803, 1995
TscAI CASTG 2 cut(s) 735, 1155
TseFI GTSAC 1 cut(s) 692
Tsp45I GTSAC 1 cut(s) 692
TspDTI ATGAA 6 cut(s) 398, 494, 559, 609, 698, 1518
TspGWI ACGGA 4 cut(s) 134, 1642, 1710, 1859
TspRI CASTG 2 cut(s) 735, 1155
Tth111I GACNNNGTC 1 cut(s) 224
Vha464I CTTAAG 1 cut(s) 1802
VneI GTGCAC 1 cut(s) 303
VpaK11BI GGWCC 6 cut(s) 85, 220, 298, 547, 1180, 1629
XagI CCTNNNNNAGG 1 cut(s) 113
XapI RAATTY 4 cut(s) 566, 788, 896, 1429
XhoI CTCGAG 1 cut(s) 1292
XmiI GTMKAC 2 cut(s) 741, 853
XmnI GAANNNNTTC 4 cut(s) 519, 1218, 2012, 2047
XspI CTAG 4 cut(s) 1025, 1574, 1599, 1826
Zsp2I ATGCAT 1 cut(s) 1739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.