Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0010382

Physical Location & Seq

Genomic Coordinates Forward (+)

5613159 .. 5618173

Gene Structure 5015 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1080100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGGCTTGTTGTTTTTCTGTAGTTTCCAATACTGGGTTCTTATCTGTCCCAAACAAATTGGAATTTAATGGCGGAAAGTCCAAGTCTTTGGGGAGGTATAGAGGTTTTTACTGTAGTTCATTTGGTTTTCGGTCGGCGGGGTTTCATAAATTTCGAAACTTTCAACATGGGTTGTTTTGGAACAATGAGCTTAGGCCACTGATGAATGGAAACAATGGAGTTTGGTTAAAGGGATTGAATAATTGTTGTGATTCTAGACATGGGTTGTGTTGTTACAATAAAATTGAGCCATTGACAAATGCGAATAGCGCGAATAAGCAGATCCATTTCGGGAAGAAAGGAGACACTAAGTTGAGGTCTTTGAGGAGGCGATTTTCTTTGAGATTACGCCCGAGGTTGCGGTGGTTGGCTATGAGAGTGAAAAGAGTTACAATTCAGTCAGTGTTGAATGGTGTTCGGGCCTTCTTGCAAAAGAACATAAGACGAGTGACTGTTGTTTCTTTGGTTTCTGTAATATTGGGGCTGAGCTATCTGTTTCTGAAGTTAACAGCTTTGCCCTCTCCGAAAATGGTTCCATATTCCGAATTGGTAACAAGCCTGAGAAATGAGTCTGTTACGAAAGTTCTACTTGAAGAGGGGTCTCGTCGAATATATTATAACACAAACTCTCGCATTGATAGGGATACTCAATTGTCTGAAGGAGAATTACCAAGCGTTCAAAGTGAGAATGTGGCCGATAAAGTAACAAGTGATGATGGTTCTCGATCTAGTCAAGCACTGAATACAAATGTATTGAGAAATTTATCAGCGACTCGAGCTTCAACCCCTGACTGGCAGTATTTGACTAGAAAAGTAGATCATGATGAGAAATTTTTACTTAGTTTGATGAGAGAGAAAGGAATTACATATAGCTCGGCTCCTCAATCAGTTTTGATGTCAATGAGGACTACTTTGATAACTATAATATCTCTGTGGATTCCTTTGATGCCATTGATGTGGCTTCTTTATCGTCAACTTTCAGCTGCTAATAGCCCAGCTAGAAAGCAACGACCTGATAAGCAGTTGGTTGGATTTGAGGATGTTGAGGGAGTTGATGCTGCGAAATTGGAGCTTATGGAGATAGTTTTATGCTTGCAAGGAGCTATTAACTACAACAAACTAGGAGCAAAGTTACCCAGAGGTGTATTGCTGGTGGGTCCTCCAGGAACAGGGAAAACATTACTTGCCCGTGCAGTGGCTGGAGAAGCAGGTGTACCATTTTTCAGTGTTTCTGCCAGTGAATTTGTGGAGATGTTTGTTGGAAGAGGGGCAGCTCGCATTAGAGACCTTTTTAATATGGCAAGGAAACATTCCCCTTCAATTATATTCATTGATGAGCTTGATGCAGTTGGAACGAAGCGTGGCAGAAGTTTCAATGATGAGCGTGACCAAACATTGAATCAGTTGCTGACGGAAATGGATGGATTTGAGTCAGACTCGAAGGTGATTGTTGTTGCAGCAACAAACAGGCCTGAAGTATTGGATTCTGCCCTTTGTAGGCCAGGCCGCTTCTCAAGAAAAATAGTTGTAGGAGAACCAGATGAAGAAGGAAGGAGAAAGATATTGGCTGTACATTTGAGAGGAGTTCCTTTGGAGGAAGACACTAATCTTATTTGCGATCTCATTGCTTCACTGACACCAGGTTTTGTAGGTGCTGATCTTGCAAACATCATCAATGAAGCTGCTTTACTTGCTGCTCGTAGGGGTGGTGAAACTGTGGCCAGGGAAGATGTAATGGAAGCAATTGAAAGAGCAAAGTTTGGAATTAATGATAAGCAACTTAGGCCGAGTACAATAAGCAAGGAGCTCGGGAAAATGTTCCCATGGATGCCTTCTCTGATGGGAAAGAACACAAGACAAGATGGAGTGCAAGGGCCACTAGGATATCAAACTCTGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext

Protein Analysis

647

Amino Acids

71.97

Weight (kDa)

9.76

Isoelectric Point (pI)

45.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	395 - 524	1.5e-46	ATPase family associated with various cellular activities (AAA)
nSTAND3	PF20720	395 - 539	2.9e-06	Novel STAND NTPase 3
AAA_lid_3	PF17862	554 - 592	4e-12	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02450
fragaria_vesca	FvH4_6g45740
malus_domestica	MD09G1080100.v1.1 MD17G1070600.v1.1
prunus_persica	Prupe.3G243600_v2.0.a1 Prupe.3G243600_v2.0.a1 Prupe.3G243600_v2.0.a1 Prupe.3G243600_v2.0.a1 Prupe.3G243600_v2.0.a1
pyrus_communis	pycom09g00680 pycom17g07050
rosa_chinensis	RchiOBHm_Chr2g0163931
rosa_laevigata	RLG00000021426
rosa_multiflora	Rmu_ssc0000432.1_g000026
rosa_roxburghii	Rroxscaffold_2G00086920
rosa_rugosa	Rorug02G0505100
rosa_samantha	Rh2AG573500 Rh2BG584200 Rh2CG555100 Rh2DG593700
rosa_wichuraiana	Rw2G047430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	657
AarI	CACCTGC	1 cut(s)	1238
Acc36I	ACCTGC	1 cut(s)	1238
AccII	CGCG	1 cut(s)	311
AciI	CCGC	4 cut(s)	72, 137, 400, 1546
AclWI	GGATC	1 cut(s)	316
AcoI	YGGCCR	2 cut(s)	732, 1758
AcsI	RAATTY	5 cut(s)	62, 149, 799, 869, 1280
AcuI	CTGAAG	3 cut(s)	560, 717, 1533
AfaI	GTAC	3 cut(s)	1254, 1611, 1831
AfiI	CCNNNNNNNGG	5 cut(s)	33, 831, 1208, 1234, 1536
AjnI	CCWGG	4 cut(s)	1201, 1540, 1678, 1760
AjuI	GAANNNNNNNTTGG	2 cut(s)	20, 52
Alw21I	GWGCWC	1 cut(s)	1848
Alw26I	GTCTC	3 cut(s)	336, 645, 1317
AlwI	GGATC	1 cut(s)	316
AlwNI	CAGNNNCTG	2 cut(s)	1238, 1447
Ama87I	CYCGRG	3 cut(s)	391, 813, 1847
AoxI	GGCC	9 cut(s)	194, 459, 732, 1508, 1538, 1543, 1758, 1823, 1913
ApeKI	GCWGC	6 cut(s)	1022, 1097, 1310, 1496, 1721, 1733
ApoI	RAATTY	5 cut(s)	62, 149, 799, 869, 1280
AseI	ATTAAT	1 cut(s)	1806
Asp700I	GAANNNNTTC	1 cut(s)	1856
AspLEI	GCGC	1 cut(s)	311
AspS9I	GGNCC	3 cut(s)	459, 1196, 1913
AsuHPI	GGTGA	2 cut(s)	1495, 1760
AsuII	TTCGAA	1 cut(s)	154
AvaI	CYCGRG	3 cut(s)	391, 813, 1847
AvaII	GGWCC	1 cut(s)	1196
BalI	TGGCCA	1 cut(s)	1760
BanII	GRGCYC	1 cut(s)	1848
BarI	GAAGNNNNNNTAC	6 cut(s)	690, 722, 1236, 1268, 1710, 1742
BbsI	GAAGAC	1 cut(s)	1644
Bbv12I	GWGCWC	1 cut(s)	1848
BbvI	GCAGC	6 cut(s)	1009, 1084, 1322, 1508, 1708, 1720
BccI	CCATC	4 cut(s)	749, 1454, 1873, 1895
BcgI	CGANNNNNNTGC	4 cut(s)	1646, 1680, 1828, 1862
BciT130I	CCWGG	4 cut(s)	1203, 1542, 1680, 1762
BciVI	GTATCC	1 cut(s)	676
BcoDI	GTCTC	3 cut(s)	336, 645, 1317
BfaI	CTAG	6 cut(s)	255, 768, 846, 1038, 1160, 1919
BfmI	CTRYAG	2 cut(s)	18, 112
BfuAI	ACCTGC	1 cut(s)	1238
BfuI	GTATCC	1 cut(s)	676
BisI	GCNGC	7 cut(s)	1023, 1098, 1311, 1497, 1546, 1722, 1734
BlpI	GCTNAGC	1 cut(s)	524
BlsI	GCNGC	7 cut(s)	1024, 1099, 1312, 1498, 1547, 1723, 1735
Bme1390I	CCNGG	4 cut(s)	1203, 1542, 1680, 1762
Bme18I	GGWCC	1 cut(s)	1196
BmeT110I	CYCGRG	3 cut(s)	391, 813, 1847
BmgT120I	GGNCC	3 cut(s)	459, 1196, 1913
BmiI	GGNNCC	3 cut(s)	573, 918, 1197
BmrFI	CCNGG	4 cut(s)	1203, 1542, 1680, 1762
BmrI	ACTGGG	1 cut(s)	42
BmsI	GCATC	4 cut(s)	975, 1084, 1372, 1857
BmuI	ACTGGG	1 cut(s)	42
BpiI	GAAGAC	1 cut(s)	1644
BplI	GAGNNNNNCTC	2 cut(s)	1460, 1492
BpmI	CTGGAG	2 cut(s)	1185, 1260
Bpu10I	CCTNAGC	1 cut(s)	191
Bpu1102I	GCTNAGC	1 cut(s)	524
Bpu14I	TTCGAA	1 cut(s)	154
BpuEI	CTTGAG	1 cut(s)	1537
BsaI	GGTCTC	2 cut(s)	645, 1317
BsaJI	CCNNGG	3 cut(s)	392, 1761, 1862
Bsc4I	CCNNNNNNNGG	5 cut(s)	33, 831, 1208, 1234, 1536
Bse1I	ACTGG	3 cut(s)	37, 836, 1275
Bse3DI	GCAATG	1 cut(s)	1662
BseBI	CCWGG	4 cut(s)	1203, 1542, 1680, 1762
BseDI	CCNNGG	3 cut(s)	392, 1761, 1862
BseGI	GGATG	3 cut(s)	1084, 1465, 1872
BseLI	CCNNNNNNNGG	5 cut(s)	33, 831, 1208, 1234, 1536
BseMI	GCAATG	1 cut(s)	1662
BseMII	CTCAG	3 cut(s)	515, 590, 1925
BseNI	ACTGG	3 cut(s)	37, 836, 1275
BseRI	GAGGAG	3 cut(s)	379, 909, 1635
BseXI	GCAGC	6 cut(s)	1009, 1084, 1322, 1508, 1708, 1720
BseYI	CCCAGC	1 cut(s)	1033
BsgI	GTGCAG	1 cut(s)	1251
Bsh1236I	CGCG	1 cut(s)	311
Bsh1285I	CGRYCG	1 cut(s)	134
BshFI	GGCC	9 cut(s)	196, 461, 734, 1510, 1540, 1545, 1760, 1825, 1915
BsiEI	CGRYCG	1 cut(s)	134
BsiHKAI	GWGCWC	1 cut(s)	1848
BsiHKCI	CYCGRG	3 cut(s)	391, 813, 1847
BslFI	GGGAC	1 cut(s)	32
BslI	CCNNNNNNNGG	5 cut(s)	33, 831, 1208, 1234, 1536
BsmAI	GTCTC	3 cut(s)	336, 645, 1317
BsmFI	GGGAC	1 cut(s)	32
BsnI	GGCC	9 cut(s)	196, 461, 734, 1510, 1540, 1545, 1760, 1825, 1915
Bso31I	GGTCTC	2 cut(s)	645, 1317
BsoBI	CYCGRG	3 cut(s)	391, 813, 1847
Bsp119I	TTCGAA	1 cut(s)	154
Bsp1286I	GDGCHC	1 cut(s)	1848
Bsp1407I	TGTACA	1 cut(s)	1609
Bsp143I	GATC	5 cut(s)	321, 764, 856, 1657, 1696
Bsp1720I	GCTNAGC	1 cut(s)	524
Bsp19I	CCATGG	1 cut(s)	1862
BspACI	CCGC	4 cut(s)	72, 137, 400, 1546
BspANI	GGCC	9 cut(s)	196, 461, 734, 1510, 1540, 1545, 1760, 1825, 1915
BspCNI	CTCAG	3 cut(s)	516, 591, 1926
BspFNI	CGCG	1 cut(s)	311
BspHI	TCATGA	1 cut(s)	859
BspLI	GGNNCC	3 cut(s)	573, 918, 1197
BspMI	ACCTGC	1 cut(s)	1238
BspPI	GGATC	1 cut(s)	316
BspT104I	TTCGAA	1 cut(s)	154
BspTNI	GGTCTC	2 cut(s)	645, 1317
BsrDI	GCAATG	1 cut(s)	1662
BsrGI	TGTACA	1 cut(s)	1609
BsrI	ACTGG	3 cut(s)	37, 836, 1275
BssECI	CCNNGG	3 cut(s)	392, 1761, 1862
BssMI	GATC	5 cut(s)	321, 764, 856, 1657, 1696
BssT1I	CCWWGG	1 cut(s)	1862
Bst2UI	CCWGG	4 cut(s)	1203, 1542, 1680, 1762
Bst4CI	ACNGT	3 cut(s)	113, 493, 1756
Bst6I	CTCTTC	2 cut(s)	627, 1297
BstAUI	TGTACA	1 cut(s)	1609
BstBI	TTCGAA	1 cut(s)	154
BstC8I	GCNNGC	2 cut(s)	1133, 1315
BstDEI	CTNAG	7 cut(s)	191, 348, 524, 599, 878, 1820, 1934
BstDSI	CCRYGG	1 cut(s)	1862
BstF5I	GGATG	3 cut(s)	1084, 1465, 1872
BstFNI	CGCG	1 cut(s)	311
BstHHI	GCGC	1 cut(s)	311
BstKTI	GATC	5 cut(s)	324, 767, 859, 1660, 1699
BstMAI	GTCTC	3 cut(s)	336, 645, 1317
BstMBI	GATC	5 cut(s)	321, 764, 856, 1657, 1696
BstMCI	CGRYCG	1 cut(s)	134
BstMWI	GCNNNNNNNGC	6 cut(s)	308, 815, 1244, 1700, 1730, 1822
BstNI	CCWGG	4 cut(s)	1203, 1542, 1680, 1762
BstSCI	CCNGG	4 cut(s)	1201, 1540, 1678, 1760
BstSFI	CTRYAG	2 cut(s)	18, 112
BstUI	CGCG	1 cut(s)	311
BstV1I	GCAGC	6 cut(s)	1009, 1084, 1322, 1508, 1708, 1720
BstV2I	GAAGAC	1 cut(s)	1644
BstX2I	RGATCY	1 cut(s)	321
BstXI	CCANNNNNNTGG	2 cut(s)	88, 996
BstYI	RGATCY	1 cut(s)	321
BsuI	GTATCC	1 cut(s)	676
BsuRI	GGCC	9 cut(s)	196, 461, 734, 1510, 1540, 1545, 1760, 1825, 1915
BtgI	CCRYGG	1 cut(s)	1862
BtsCI	GGATG	3 cut(s)	1084, 1465, 1872
BtsI	GCAGTG	1 cut(s)	1239
BtsIMutI	CAGTG	7 cut(s)	197, 447, 776, 1239, 1270, 1282, 1670
BveI	ACCTGC	1 cut(s)	1238
Cac8I	GCNNGC	2 cut(s)	1133, 1315
CaiI	CAGNNNCTG	2 cut(s)	1238, 1447
CciI	TCATGA	1 cut(s)	859
CfoI	GCGC	1 cut(s)	311
Cfr13I	GGNCC	3 cut(s)	459, 1196, 1913
CsiI	ACCWGGT	1 cut(s)	1678
Csp6I	GTAC	3 cut(s)	1253, 1610, 1830
CviAII	CATG	4 cut(s)	167, 260, 860, 1863
CviQI	GTAC	3 cut(s)	1253, 1610, 1830
DdeI	CTNAG	7 cut(s)	191, 348, 524, 599, 878, 1820, 1934
DpnI	GATC	5 cut(s)	323, 766, 858, 1659, 1698
DpnII	GATC	5 cut(s)	321, 764, 856, 1657, 1696
EaeI	YGGCCR	2 cut(s)	732, 1758
Eam1104I	CTCTTC	2 cut(s)	627, 1297
EarI	CTCTTC	2 cut(s)	627, 1297
EciI	GGCGGA	1 cut(s)	87
Ecl136II	GAGCTC	1 cut(s)	1846
Eco130I	CCWWGG	1 cut(s)	1862
Eco147I	AGGCCT	1 cut(s)	1510
Eco24I	GRGCYC	1 cut(s)	1848
Eco31I	GGTCTC	2 cut(s)	645, 1317
Eco32I	GATATC	1 cut(s)	1925
Eco47I	GGWCC	1 cut(s)	1196
Eco53kI	GAGCTC	1 cut(s)	1846
Eco57I	CTGAAG	3 cut(s)	560, 717, 1533
Eco88I	CYCGRG	3 cut(s)	391, 813, 1847
EcoICRI	GAGCTC	1 cut(s)	1846
EcoO109I	RGGNCCY	1 cut(s)	1196
EcoRII	CCWGG	4 cut(s)	1201, 1540, 1678, 1760
EcoRV	GATATC	1 cut(s)	1925
EcoT14I	CCWWGG	1 cut(s)	1862
EcoT38I	GRGCYC	1 cut(s)	1848
ErhI	CCWWGG	1 cut(s)	1862
FaeI	CATG	4 cut(s)	170, 263, 863, 1866
FalI	AAGNNNNNCTT	2 cut(s)	612, 644
FaqI	GGGAC	1 cut(s)	32
FatI	CATG	4 cut(s)	166, 259, 859, 1862
FauI	CCCGC	1 cut(s)	130
Fnu4HI	GCNGC	7 cut(s)	1023, 1098, 1311, 1497, 1546, 1722, 1734
FokI	GGATG	3 cut(s)	1091, 1472, 1879
FriOI	GRGCYC	1 cut(s)	1848
Fsp4HI	GCNGC	7 cut(s)	1023, 1098, 1311, 1497, 1546, 1722, 1734
FspBI	CTAG	6 cut(s)	255, 768, 846, 1038, 1160, 1919
GlaI	GCGC	1 cut(s)	310
GluI	GCNGC	7 cut(s)	1023, 1098, 1311, 1497, 1546, 1722, 1734
GsaI	CCCAGC	1 cut(s)	1037
GsuI	CTGGAG	2 cut(s)	1185, 1260
HaeIII	GGCC	9 cut(s)	196, 461, 734, 1510, 1540, 1545, 1760, 1825, 1915
HhaI	GCGC	1 cut(s)	311
Hin1II	CATG	4 cut(s)	170, 263, 863, 1866
Hin6I	GCGC	1 cut(s)	309
HinP1I	GCGC	1 cut(s)	309
HincII	GTYRAC	2 cut(s)	546, 1013
HindII	GTYRAC	2 cut(s)	546, 1013
HinfI	GANTC	8 cut(s)	251, 608, 811, 976, 1438, 1469, 1475, 1523
HpaI	GTTAAC	1 cut(s)	546
HphI	GGTGA	2 cut(s)	1495, 1760
Hpy166II	GTNNAC	3 cut(s)	546, 1013, 1253
Hpy188I	TCNGA	7 cut(s)	540, 564, 583, 697, 1474, 1878, 1935
Hpy188III	TCNNGA	6 cut(s)	255, 331, 762, 860, 1554, 1849
Hpy8I	GTNNAC	3 cut(s)	546, 1013, 1253
Hpy99I	CGWCG	1 cut(s)	648
HpyAV	CCTTC	7 cut(s)	472, 692, 1365, 1474, 1580, 1584, 1881
HpyCH4III	ACNGT	3 cut(s)	113, 493, 1756
HpyCH4V	TGCA	7 cut(s)	469, 1135, 1232, 1385, 1496, 1703, 1909
HpyF10VI	GCNNNNNNNGC	6 cut(s)	308, 815, 1244, 1700, 1730, 1822
HpyF3I	CTNAG	7 cut(s)	191, 348, 524, 599, 878, 1820, 1934
Hsp92II	CATG	4 cut(s)	170, 263, 863, 1866
HspAI	GCGC	1 cut(s)	309
KspAI	GTTAAC	1 cut(s)	546
Kzo9I	GATC	5 cut(s)	321, 764, 856, 1657, 1696
LmnI	GCTCC	5 cut(s)	922, 1108, 1139, 1163, 1843
Lsp1109I	GCAGC	6 cut(s)	1009, 1084, 1322, 1508, 1708, 1720
LweI	GCATC	4 cut(s)	975, 1084, 1372, 1857
MabI	ACCWGGT	1 cut(s)	1678
MaeI	CTAG	6 cut(s)	255, 768, 846, 1038, 1160, 1919
MaeIII	GTNAC	8 cut(s)	272, 427, 487, 589, 613, 742, 1170, 1424
MalI	GATC	5 cut(s)	323, 766, 858, 1659, 1698
MboI	GATC	5 cut(s)	321, 764, 856, 1657, 1696
MboII	GAAGA	6 cut(s)	346, 644, 1314, 1595, 1649, 1778
MfeI	CAATTG	2 cut(s)	689, 1782
MflI	RGATCY	1 cut(s)	321
MhlI	GDGCHC	1 cut(s)	1848
MlsI	TGGCCA	1 cut(s)	1760
MluNI	TGGCCA	1 cut(s)	1760
MlyI	GAGTC	4 cut(s)	617, 805, 1469, 1478
MmeI	TCCRAC	3 cut(s)	1048, 1279, 1369
Mox20I	TGGCCA	1 cut(s)	1760
MroXI	GAANNNNTTC	1 cut(s)	1856
MscI	TGGCCA	1 cut(s)	1760
MseI	TTAA	6 cut(s)	66, 227, 545, 1146, 1332, 1806
MslI	CAYNNNNRTG	1 cut(s)	994
Msp20I	TGGCCA	1 cut(s)	1760
MspA1I	CMGCKG	1 cut(s)	1022
MspR9I	CCNGG	4 cut(s)	1203, 1542, 1680, 1762
MunI	CAATTG	2 cut(s)	689, 1782
MvaI	CCWGG	4 cut(s)	1203, 1542, 1680, 1762
MvnI	CGCG	1 cut(s)	311
MwoI	GCNNNNNNNGC	6 cut(s)	308, 815, 1244, 1700, 1730, 1822
NcoI	CCATGG	1 cut(s)	1862
NdeII	GATC	5 cut(s)	321, 764, 856, 1657, 1696
NlaIII	CATG	4 cut(s)	170, 263, 863, 1866
NlaIV	GGNNCC	3 cut(s)	573, 918, 1197
NmeAIII	GCCGAG	2 cut(s)	893, 1851
NmuCI	GTSAC	2 cut(s)	487, 1424
NspV	TTCGAA	1 cut(s)	154
PaeR7I	CTCGAG	1 cut(s)	813
PagI	TCATGA	1 cut(s)	859
PaqCI	CACCTGC	1 cut(s)	1238
PceI	AGGCCT	1 cut(s)	1510
PdmI	GAANNNNTTC	1 cut(s)	1856
PfeI	GAWTC	4 cut(s)	251, 976, 1438, 1523
PfoI	TCCNGGA	1 cut(s)	1201
PkrI	GCNGC	7 cut(s)	1024, 1099, 1312, 1498, 1547, 1723, 1735
PleI	GAGTC	4 cut(s)	616, 805, 1469, 1477
PpsI	GAGTC	4 cut(s)	616, 805, 1469, 1477
PpuMI	RGGWCCY	1 cut(s)	1196
PshBI	ATTAAT	1 cut(s)	1806
PsiI	TTATAA	1 cut(s)	657
Psp124BI	GAGCTC	1 cut(s)	1848
Psp5II	RGGWCCY	1 cut(s)	1196
Psp6I	CCWGG	4 cut(s)	1201, 1540, 1678, 1760
PspFI	CCCAGC	1 cut(s)	1033
PspGI	CCWGG	4 cut(s)	1201, 1540, 1678, 1760
PspN4I	GGNNCC	3 cut(s)	573, 918, 1197
PspPI	GGNCC	3 cut(s)	459, 1196, 1913
PspPPI	RGGWCCY	1 cut(s)	1196
PspXI	VCTCGAGB	1 cut(s)	813
PstNI	CAGNNNCTG	2 cut(s)	1238, 1447
PsuI	RGATCY	1 cut(s)	321
PvuII	CAGCTG	1 cut(s)	1022
RsaI	GTAC	3 cut(s)	1254, 1611, 1831
RsaNI	GTAC	3 cut(s)	1253, 1610, 1830
RseI	CAYNNNNRTG	1 cut(s)	994
SacI	GAGCTC	1 cut(s)	1848
SaqAI	TTAA	6 cut(s)	66, 227, 545, 1146, 1332, 1806
SatI	GCNGC	7 cut(s)	1023, 1098, 1311, 1497, 1546, 1722, 1734
Sau3AI	GATC	5 cut(s)	321, 764, 856, 1657, 1696
Sau96I	GGNCC	3 cut(s)	459, 1196, 1913
SchI	GAGTC	4 cut(s)	617, 805, 1469, 1478
ScrFI	CCNGG	4 cut(s)	1203, 1542, 1680, 1762
SduI	GDGCHC	1 cut(s)	1848
SexAI	ACCWGGT	1 cut(s)	1678
SfaNI	GCATC	4 cut(s)	975, 1084, 1372, 1857
SfcI	CTRYAG	2 cut(s)	18, 112
Sfr274I	CTCGAG	1 cut(s)	813
SfuI	TTCGAA	1 cut(s)	154
SinI	GGWCC	1 cut(s)	1196
SlaI	CTCGAG	1 cut(s)	813
SmiMI	CAYNNNNRTG	1 cut(s)	994
SmlI	CTYRAG	2 cut(s)	813, 1552
SmoI	CTYRAG	2 cut(s)	813, 1552
SseBI	AGGCCT	1 cut(s)	1510
SsiI	CCGC	4 cut(s)	72, 137, 400, 1546
SspI	AATATT	1 cut(s)	516
SspMI	CTAG	6 cut(s)	255, 768, 846, 1038, 1160, 1919
SstI	GAGCTC	1 cut(s)	1848
StuI	AGGCCT	1 cut(s)	1510
StyD4I	CCNGG	4 cut(s)	1201, 1540, 1678, 1760
StyI	CCWWGG	1 cut(s)	1862
TaaI	ACNGT	3 cut(s)	113, 493, 1756
TaqI	TCGA	5 cut(s)	154, 646, 763, 814, 1478
TaqII	GACCGA	1 cut(s)	120
TatI	WGTACW	2 cut(s)	1609, 1829
TauI	GCSGC	1 cut(s)	1548
TfiI	GAWTC	4 cut(s)	251, 976, 1438, 1523
Tru1I	TTAA	6 cut(s)	66, 227, 545, 1146, 1332, 1806
Tru9I	TTAA	6 cut(s)	66, 227, 545, 1146, 1332, 1806
TscAI	CASTG	7 cut(s)	204, 447, 783, 1239, 1270, 1282, 1677
TseFI	GTSAC	2 cut(s)	487, 1424
TseI	GCWGC	6 cut(s)	1022, 1097, 1310, 1496, 1721, 1733
Tsp45I	GTSAC	2 cut(s)	487, 1424
TspDTI	ATGAA	6 cut(s)	108, 134, 218, 1357, 1596, 1731
TspGWI	ACGGA	1 cut(s)	1466
TspRI	CASTG	7 cut(s)	204, 447, 783, 1239, 1270, 1282, 1677
VpaK11BI	GGWCC	1 cut(s)	1196
VspI	ATTAAT	1 cut(s)	1806
XapI	RAATTY	5 cut(s)	62, 149, 799, 869, 1280
XbaI	TCTAGA	1 cut(s)	254
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1282
XhoI	CTCGAG	1 cut(s)	813
XmnI	GAANNNNTTC	1 cut(s)	1856
XspI	CTAG	6 cut(s)	255, 768, 846, 1038, 1160, 1919

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.