MD09G1126500.v1.1

N-acetylglucosaminyltransferase II (MGAT2)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
9768166 .. 9769449
1284 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1126500.v1.1.491

Sequence Viewer

Length: 1284 bp
ATGGCTATTATCAAGAAACAGCGTCTGAAGGACAAAGCGGCTTTTCGCCGTTTCTTGCCAGTGGTTTCGATTACATTGTTAGGGGTTTTCCTGCTGATGTTCCTCCTGAGATTTAATTCGAGTTCAAATTTTGTCACACCGCCTTCGGATGATTTTGATGAAGTATCAATAAGGAGTGGTAGTCGTTCACATGTTCGACAAATACTTAGCCTCCCTAAGCAGACTGAATTGTCAGTTCAGTTGGAAAAGAGAAATCAGATGCCCCCTAGGAACTTAGATCTCTATCCAAGTCTAGCCAAGGATCATATAACTATAGTTCTTTATGTGCACAACCGGCCGCAGTATCTCAAAGTAGCTGTTGATAGTCTGTCTCGGGTTGTAGGTATAAATGAAACTTTACTAATAGTTAGTCATGATGGATTCTTTGAAGAAATGAACAAGGTTGTGGAAGGGATCAGATTTTGCCAGGTGAAACAGATATTTGCTCCTTACTCGCCCCACGTCTTTCCCAATAGTTTTCCAGGGGCATCATCTACAGACTGTAAGGGAAAGGATGATGCGAAAGCGAAACACTGTAAGGGGACTCCTGATCAGTACGGAAACCACCGATCTCCAAAGATCGTGTCATTAAAGCATCATTGGTGGTGGATGATGAACACAGTGTGGGATGGATTGAAGGAGACCAAGGATCACAATGGTCATATTCTTTTCATAGAGGAGGACCATTATATATATCCCAATGCATATCGTAATTTGCAGATACTCACGGAATTGAAGCCTCATAAATGCCCTCATTGCTATGCTGCAAACTTAGCACCGTGTAATGTGAATGCAAAAGGAGAAGGTTGGGATAGTTTGATTGCAGAGAGAATGGGAAACGTGGGATATACATTTAACCGGACTGTTTGGAGGAAAATTCACAAGAAGTCTTCAGAATTTTGTTTCTTTGATGAATACAATTGGGATATAACAATGTGGGCAACAGTCTATCCCTCATTTGGTAATCCTGTTTTCACATTACGAGGGCCTCGGACTAGTGCAGTACACTTTGGTAAGTGTGGTTTGCACCAGGGACAGGGGGAGGCAAAAACATGTATTGACAACGGCATGGTGAACTTTGATGTGGAGGAGATAGATAAGGTTGCAAACATCAACTCGGACTGGGAAGTGCAAGTCTTTAAGAATCAGCCAGGGTACCAAGCCGGGTTCAAGGGTTGGGGAGGTTGGGGGGACAAGAGAGACCACCAATTGTGCTTGAGTTTTGCTCAGATGTATCATTCATAG

Protein Analysis

428

Amino Acids

48.98

Weight (kDa)

8.84

Isoelectric Point (pI)

39.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MGAT2 PF05060 87 - 418 6.6e-102 N-acetylglucosaminyltransferase II (MGAT2)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013099)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 229
Acc65I GGTACC 1 cut(s) 1194
AccB1I GGYRCC 1 cut(s) 1194
AciI CCGC 3 cut(s) 38, 140, 338
AclWI GGATC 3 cut(s) 309, 461, 696
AcoI YGGCCR 1 cut(s) 335
AcsI RAATTY 3 cut(s) 127, 915, 935
AcuI CTGAAG 2 cut(s) 47, 915
AdeI CACNNNGTG 1 cut(s) 663
AfaI GTAC 3 cut(s) 596, 1044, 1196
AfiI CCNNNNNNNGG 2 cut(s) 998, 1075
AflIII ACRYGT 2 cut(s) 190, 1091
AgsI TTSAA 5 cut(s) 126, 428, 676, 775, 1210
AhlI ACTAGT 1 cut(s) 1034
AjiI CACGTC 1 cut(s) 502
AjnI CCWGG 4 cut(s) 465, 520, 1068, 1189
AluBI AGCT 1 cut(s) 356
AluI AGCT 1 cut(s) 356
Alw21I GWGCWC 1 cut(s) 330
Alw26I GTCTC 3 cut(s) 375, 674, 1233
Alw44I GTGCAC 1 cut(s) 326
AlwI GGATC 3 cut(s) 309, 461, 696
AlwNI CAGNNNCTG 1 cut(s) 25
Ama87I CYCGRG 1 cut(s) 372
AoxI GGCC 2 cut(s) 335, 1025
ApaLI GTGCAC 1 cut(s) 326
ApeKI GCWGC 1 cut(s) 803
ApoI RAATTY 3 cut(s) 127, 915, 935
ArsI GACNNNNNNTTYG 2 cut(s) 608, 640
Asp718I GGTACC 1 cut(s) 1194
AspA2I CCTAGG 1 cut(s) 266
AspS9I GGNCC 2 cut(s) 721, 1025
AsuC2I CCSGG 1 cut(s) 1204
AsuHPI GGTGA 2 cut(s) 481, 1123
AvaI CYCGRG 1 cut(s) 372
AvaII GGWCC 1 cut(s) 721
AvrII CCTAGG 1 cut(s) 266
BaeGI GKGCMC 1 cut(s) 330
BanI GGYRCC 1 cut(s) 1194
BbsI GAAGAC 1 cut(s) 921
Bbv12I GWGCWC 1 cut(s) 330
BbvI GCAGC 1 cut(s) 790
BccI CCATC 2 cut(s) 410, 662
BceAI ACGGC 2 cut(s) 33, 1120
BciT130I CCWGG 4 cut(s) 467, 522, 1070, 1191
BclI TGATCA 1 cut(s) 589
BcnI CCSGG 1 cut(s) 1204
BcoDI GTCTC 3 cut(s) 375, 674, 1233
BcuI ACTAGT 1 cut(s) 1034
BfaI CTAG 3 cut(s) 267, 293, 1035
BfmI CTRYAG 2 cut(s) 312, 534
BglII AGATCT 1 cut(s) 277
BisI GCNGC 3 cut(s) 39, 338, 804
BlnI CCTAGG 1 cut(s) 266
BlsI GCNGC 3 cut(s) 40, 339, 805
Bme1390I CCNGG 5 cut(s) 467, 522, 1070, 1191, 1204
Bme18I GGWCC 1 cut(s) 721
BmeT110I CYCGRG 1 cut(s) 372
BmgBI CACGTC 1 cut(s) 502
BmgT120I GGNCC 2 cut(s) 721, 1025
BmiI GGNNCC 1 cut(s) 1196
BmrFI CCNGG 5 cut(s) 467, 522, 1070, 1191, 1204
BmrI ACTGGG 1 cut(s) 1171
BmsI GCATC 4 cut(s) 249, 536, 547, 643
BmuI ACTGGG 1 cut(s) 1171
BpiI GAAGAC 1 cut(s) 921
BplI GAGNNNNNCTC 2 cut(s) 1249, 1281
Bpu10I CCTNAGC 1 cut(s) 216
BpuEI CTTGAG 1 cut(s) 1276
BpuMI CCSGG 1 cut(s) 1204
BsaBI GATNNNNATC 1 cut(s) 282
BsaI GGTCTC 2 cut(s) 674, 1233
BsaJI CCNNGG 7 cut(s) 266, 297, 521, 684, 1028, 1069, 1190
BsaWI WCCGGW 1 cut(s) 897
BsaXI ACNNNNNCTCC 4 cut(s) 166, 195, 196, 225
Bsc4I CCNNNNNNNGG 2 cut(s) 998, 1075
Bse118I RCCGGY 1 cut(s) 333
Bse1I ACTGG 2 cut(s) 59, 1166
Bse3DI GCAATG 1 cut(s) 793
Bse8I GATNNNNATC 1 cut(s) 282
BseBI CCWGG 4 cut(s) 467, 522, 1070, 1191
BseDI CCNNGG 7 cut(s) 266, 297, 521, 684, 1028, 1069, 1190
BseGI GGATG 4 cut(s) 154, 559, 654, 673
BseJI GATNNNNATC 1 cut(s) 282
BseLI CCNNNNNNNGG 2 cut(s) 998, 1075
BseMI GCAATG 1 cut(s) 793
BseMII CTCAG 2 cut(s) 98, 1280
BseNI ACTGG 2 cut(s) 59, 1166
BseRI GAGGAG 2 cut(s) 731, 1142
BseSI GKGCMC 1 cut(s) 330
BseX3I CGGCCG 1 cut(s) 335
BseXI GCAGC 1 cut(s) 790
BsgI GTGCAG 1 cut(s) 1059
Bsh1285I CGRYCG 1 cut(s) 338
BshFI GGCC 2 cut(s) 337, 1027
BshNI GGYRCC 1 cut(s) 1194
BsiEI CGRYCG 1 cut(s) 338
BsiHKAI GWGCWC 1 cut(s) 330
BsiHKCI CYCGRG 1 cut(s) 372
BsiSI CCGG 3 cut(s) 334, 898, 1203
BslFI GGGAC 3 cut(s) 595, 1086, 1244
BslI CCNNNNNNNGG 2 cut(s) 998, 1075
BsmAI GTCTC 3 cut(s) 375, 674, 1233
BsmFI GGGAC 3 cut(s) 595, 1086, 1244
BsmI GAATGC 1 cut(s) 835
BsnI GGCC 2 cut(s) 337, 1027
Bso31I GGTCTC 2 cut(s) 674, 1233
BsoBI CYCGRG 1 cut(s) 372
Bsp1286I GDGCHC 1 cut(s) 330
Bsp143I GATC 7 cut(s) 277, 301, 453, 589, 608, 618, 688
BspACI CCGC 3 cut(s) 38, 140, 338
BspANI GGCC 2 cut(s) 337, 1027
BspCNI CTCAG 2 cut(s) 99, 1279
BspHI TCATGA 1 cut(s) 412
BspLI GGNNCC 1 cut(s) 1196
BspPI GGATC 3 cut(s) 309, 461, 696
BspT107I GGYRCC 1 cut(s) 1194
BspTNI GGTCTC 2 cut(s) 674, 1233
BsrDI GCAATG 1 cut(s) 793
BsrFI RCCGGY 1 cut(s) 333
BsrI ACTGG 2 cut(s) 59, 1166
BssAI RCCGGY 1 cut(s) 333
BssECI CCNNGG 7 cut(s) 266, 297, 521, 684, 1028, 1069, 1190
BssMI GATC 7 cut(s) 277, 301, 453, 589, 608, 618, 688
BssT1I CCWWGG 3 cut(s) 266, 297, 684
Bst2UI CCWGG 4 cut(s) 467, 522, 1070, 1191
Bst4CI ACNGT 6 cut(s) 542, 575, 661, 819, 904, 985
BstDEI CTNAG 6 cut(s) 107, 206, 216, 274, 811, 1266
BstF5I GGATG 4 cut(s) 154, 559, 654, 673
BstKTI GATC 7 cut(s) 280, 304, 456, 592, 611, 621, 691
BstMAI GTCTC 3 cut(s) 375, 674, 1233
BstMBI GATC 7 cut(s) 277, 301, 453, 589, 608, 618, 688
BstMCI CGRYCG 1 cut(s) 338
BstMWI GCNNNNNNNGC 3 cut(s) 334, 795, 812
BstNI CCWGG 4 cut(s) 467, 522, 1070, 1191
BstNSI RCATGY 2 cut(s) 194, 1095
BstSCI CCNGG 5 cut(s) 465, 520, 1068, 1189, 1202
BstSFI CTRYAG 2 cut(s) 312, 534
BstSLI GKGCMC 1 cut(s) 330
BstV1I GCAGC 1 cut(s) 790
BstV2I GAAGAC 1 cut(s) 921
BstX2I RGATCY 1 cut(s) 277
BstYI RGATCY 1 cut(s) 277
BstZI CGGCCG 1 cut(s) 335
BsuRI GGCC 2 cut(s) 337, 1027
BtrI CACGTC 1 cut(s) 502
BtsCI GGATG 4 cut(s) 154, 559, 654, 673
BtsIMutI CAGTG 3 cut(s) 66, 571, 666
CaiI CAGNNNCTG 1 cut(s) 25
CciI TCATGA 1 cut(s) 412
Cfr10I RCCGGY 1 cut(s) 333
Cfr13I GGNCC 2 cut(s) 721, 1025
CseI GACGC 1 cut(s) 11
Csp6I GTAC 3 cut(s) 595, 1043, 1195
CviAII CATG 4 cut(s) 191, 413, 1092, 1108
CviQI GTAC 3 cut(s) 595, 1043, 1195
DdeI CTNAG 6 cut(s) 107, 206, 216, 274, 811, 1266
DpnI GATC 7 cut(s) 279, 303, 455, 591, 610, 620, 690
DpnII GATC 7 cut(s) 277, 301, 453, 589, 608, 618, 688
DraIII CACNNNGTG 1 cut(s) 663
DrdI GACNNNNNNGTC 1 cut(s) 229
DseDI GACNNNNNNGTC 1 cut(s) 229
EaeI YGGCCR 1 cut(s) 335
EagI CGGCCG 1 cut(s) 335
EclXI CGGCCG 1 cut(s) 335
Eco130I CCWWGG 3 cut(s) 266, 297, 684
Eco31I GGTCTC 2 cut(s) 674, 1233
Eco47I GGWCC 1 cut(s) 721
Eco52I CGGCCG 1 cut(s) 335
Eco57I CTGAAG 2 cut(s) 47, 915
Eco88I CYCGRG 1 cut(s) 372
EcoO109I RGGNCCY 1 cut(s) 1025
EcoRII CCWGG 4 cut(s) 465, 520, 1068, 1189
EcoT14I CCWWGG 3 cut(s) 266, 297, 684
EcoT22I ATGCAT 1 cut(s) 745
ErhI CCWWGG 3 cut(s) 266, 297, 684
FaeI CATG 4 cut(s) 194, 416, 1095, 1111
FaqI GGGAC 3 cut(s) 595, 1086, 1244
FatI CATG 4 cut(s) 190, 412, 1091, 1107
FbaI TGATCA 1 cut(s) 589
Fnu4HI GCNGC 3 cut(s) 39, 338, 804
FokI GGATG 4 cut(s) 161, 566, 661, 680
Fsp4HI GCNGC 3 cut(s) 39, 338, 804
FspBI CTAG 3 cut(s) 267, 293, 1035
GluI GCNGC 3 cut(s) 39, 338, 804
HaeIII GGCC 2 cut(s) 337, 1027
HapII CCGG 3 cut(s) 334, 898, 1203
HgaI GACGC 1 cut(s) 11
Hin1II CATG 4 cut(s) 194, 416, 1095, 1111
HinfI GANTC 3 cut(s) 420, 583, 1183
HpaII CCGG 3 cut(s) 334, 898, 1203
HphI GGTGA 2 cut(s) 481, 1123
Hpy166II GTNNAC 4 cut(s) 188, 328, 1045, 1114
Hpy188I TCNGA 8 cut(s) 27, 148, 258, 458, 934, 1032, 1159, 1269
Hpy188III TCNNGA 4 cut(s) 13, 106, 413, 587
Hpy8I GTNNAC 4 cut(s) 188, 328, 1045, 1114
HpyAV CCTTC 5 cut(s) 22, 153, 443, 670, 836
HpyCH4III ACNGT 6 cut(s) 542, 575, 661, 819, 904, 985
HpyCH4IV ACGT 2 cut(s) 501, 879
HpyF10VI GCNNNNNNNGC 3 cut(s) 334, 795, 812
HpyF3I CTNAG 6 cut(s) 107, 206, 216, 274, 811, 1266
HpySE526I ACGT 2 cut(s) 501, 879
Hsp92II CATG 4 cut(s) 194, 416, 1095, 1111
KpnI GGTACC 1 cut(s) 1198
Ksp22I TGATCA 1 cut(s) 589
Kzo9I GATC 7 cut(s) 277, 301, 453, 589, 608, 618, 688
LmnI GCTCC 1 cut(s) 490
Lsp1109I GCAGC 1 cut(s) 790
LweI GCATC 4 cut(s) 249, 536, 547, 643
MaeI CTAG 3 cut(s) 267, 293, 1035
MaeII ACGT 2 cut(s) 501, 879
MaeIII GTNAC 1 cut(s) 133
MalI GATC 7 cut(s) 279, 303, 455, 591, 610, 620, 690
MboI GATC 7 cut(s) 277, 301, 453, 589, 608, 618, 688
MboII GAAGA 2 cut(s) 440, 921
MfeI CAATTG 2 cut(s) 958, 1247
MflI RGATCY 1 cut(s) 277
MhlI GDGCHC 1 cut(s) 330
MluCI AATT 9 cut(s) 115, 127, 227, 751, 770, 915, 935, 958, 1247
MlyI GAGTC 1 cut(s) 577
MmeI TCCRAC 1 cut(s) 222
Mph1103I ATGCAT 1 cut(s) 745
MseI TTAA 4 cut(s) 114, 629, 894, 1179
MslI CAYNNNNRTG 1 cut(s) 798
MspI CCGG 3 cut(s) 334, 898, 1203
MspR9I CCNGG 5 cut(s) 467, 522, 1070, 1191, 1204
MunI CAATTG 2 cut(s) 958, 1247
Mva1269I GAATGC 1 cut(s) 835
MvaI CCWGG 4 cut(s) 467, 522, 1070, 1191
MwoI GCNNNNNNNGC 3 cut(s) 334, 795, 812
NciI CCSGG 1 cut(s) 1204
NdeII GATC 7 cut(s) 277, 301, 453, 589, 608, 618, 688
NlaIII CATG 4 cut(s) 194, 416, 1095, 1111
NlaIV GGNNCC 1 cut(s) 1196
NmuCI GTSAC 1 cut(s) 133
NsiI ATGCAT 1 cut(s) 745
NspI RCATGY 2 cut(s) 194, 1095
PagI TCATGA 1 cut(s) 412
PciI ACATGT 2 cut(s) 190, 1091
PctI GAATGC 1 cut(s) 835
PfeI GAWTC 2 cut(s) 420, 1183
PkrI GCNGC 3 cut(s) 40, 339, 805
PleI GAGTC 1 cut(s) 577
PpsI GAGTC 1 cut(s) 577
PscI ACATGT 2 cut(s) 190, 1091
Psp6I CCWGG 4 cut(s) 465, 520, 1068, 1189
PspGI CCWGG 4 cut(s) 465, 520, 1068, 1189
PspN4I GGNNCC 1 cut(s) 1196
PspPI GGNCC 2 cut(s) 721, 1025
PstNI CAGNNNCTG 1 cut(s) 25
PsuI RGATCY 1 cut(s) 277
RsaI GTAC 3 cut(s) 596, 1044, 1196
RsaNI GTAC 3 cut(s) 595, 1043, 1195
RseI CAYNNNNRTG 1 cut(s) 798
SaqAI TTAA 4 cut(s) 114, 629, 894, 1179
SatI GCNGC 3 cut(s) 39, 338, 804
Sau3AI GATC 7 cut(s) 277, 301, 453, 589, 608, 618, 688
Sau96I GGNCC 2 cut(s) 721, 1025
SchI GAGTC 1 cut(s) 577
ScrFI CCNGG 5 cut(s) 467, 522, 1070, 1191, 1204
SduI GDGCHC 1 cut(s) 330
SetI ASST 9 cut(s) 358, 385, 444, 471, 504, 847, 882, 1143, 1225
SfaNI GCATC 4 cut(s) 249, 536, 547, 643
SfcI CTRYAG 2 cut(s) 312, 534
SinI GGWCC 1 cut(s) 721
SmiMI CAYNNNNRTG 1 cut(s) 798
SmlI CTYRAG 1 cut(s) 1255
SmoI CTYRAG 1 cut(s) 1255
SpeI ACTAGT 1 cut(s) 1034
Sse9I AATT 9 cut(s) 115, 127, 227, 751, 770, 915, 935, 958, 1247
SsiI CCGC 3 cut(s) 38, 140, 338
SspMI CTAG 3 cut(s) 267, 293, 1035
StyD4I CCNGG 5 cut(s) 465, 520, 1068, 1189, 1202
StyI CCWWGG 3 cut(s) 266, 297, 684
TaaI ACNGT 6 cut(s) 542, 575, 661, 819, 904, 985
TaiI ACGT 2 cut(s) 504, 882
TaqI TCGA 3 cut(s) 68, 119, 196
TasI AATT 9 cut(s) 115, 127, 227, 751, 770, 915, 935, 958, 1247
TatI WGTACW 1 cut(s) 1042
TauI GCSGC 2 cut(s) 41, 340
TfiI GAWTC 2 cut(s) 420, 1183
Tru1I TTAA 4 cut(s) 114, 629, 894, 1179
Tru9I TTAA 4 cut(s) 114, 629, 894, 1179
TscAI CASTG 3 cut(s) 66, 578, 666
TseFI GTSAC 1 cut(s) 133
TseI GCWGC 1 cut(s) 803
Tsp45I GTSAC 1 cut(s) 133
TspDTI ATGAA 7 cut(s) 174, 405, 449, 668, 700, 966, 1269
TspGWI ACGGA 2 cut(s) 612, 782
TspRI CASTG 3 cut(s) 66, 578, 666
VneI GTGCAC 1 cut(s) 326
VpaK11BI GGWCC 1 cut(s) 721
XapI RAATTY 3 cut(s) 127, 915, 935
XceI RCATGY 2 cut(s) 194, 1095
XmaJI CCTAGG 1 cut(s) 266
XspI CTAG 3 cut(s) 267, 293, 1035
Zsp2I ATGCAT 1 cut(s) 745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.