Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0012030

Physical Location & Seq

Genomic Coordinates Forward (+)

10707681 .. 10709030

Gene Structure 1350 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1137800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGCTTCAGAGCTTAGTTCCTCAATCCCCAATCACCGCCGCCACCCCTAACAATAACAACCCTACCTCCTCCTCCTCCTCCATGAAGACCAAGCGCGTCGACCGCGACCTTGCCGGCAGTGGAAGCGGCGATTCCGACGCCGAAGACCCCTCCTTCACCAAACGCCCCAATTCCGGCAGAAATTTCCGCGAAAGAACTGCCGACGATCGTGACACCGAACCGGTGGCGGAGGGCGAATCGGACGGGTTGAGACTGTTGGGGCTTCTGCTACAATGCGCCGAGTTCGTCGCCATGGACAGCCTCGACGACGCCAGCGACCTGTTACCTGAGATCGCGGAACTATCATCGCCGTTCGGGTCGTCGCCGGAGCGAGTAGGTGCTTATTTCTCGCACGCGCTTCAGACTCGCGTGATCAGCTCCTGCTTAGGTACCTACTCTCCGCTCACCAACAGAACCCTAACGCTTGCTCAGTCGCAGCGGATCTTCAACGCTCTCCAATCCTACAACTCCATCAGTCCGCTAGTCAAATTCTCACACTTCACGTCCAATCAGGCGATTTTCCAGGCGCTGGACGGCGAGGATCACGTCCACGTCATCGATTTGGATATAATGCAAGGCCTCCAGTGGCCAGGATTGTTCCACATCCTTGCATCGCGGTCGAAGAAGATCCGATCAATGCGAATAACCGGGTTCGGGTCCTCCTCGGAGCTCCTCGAGTCGACCGGGCGGAGACTCGCTGATTTCGCGAGCTCGCTCGGCCTGCCCTTCGAGTTCCAGCCGCTGGAGGGCAAAATCGGGAGCATAACCGACCTAAGTCAACTCGGAATCAGACCGAGCGAGGCCACCGTGGTCCACTGGATGCACCATTGCTTGTACGACGTCACCGGCAGCGATTTGGCGACGCTGAGATTGCTGGGCTCGCTGAGACCGAAGCTGATCACGATCGCCGAGCAGGATTTGAGCCACAGCGGCAGCTTCCTGAGTAGGTTTGTGGAGGCCTTGCATTACTACAGCGCGCTGTTTGATGCGCTCGGGGACGGATTGGGCGCCGACAGCCTGGAGAGGCATATGGTGGAGCAGCAGCTGTTCGGCTACGAGATTAGGAATATCCTCGCGGTGGGCGGGCCGAAGAGAACCGGGGAGGTGAAGGTGGAGAGGTGGGGGGATGAGTTGAAGCGGGTCGGGTTTGGGCCCGTTTCGCTTGGCGGGAACCCGGCGGCGCAGGCTAGCTTGTTGCTTGGGATGTTTCCGTGGAAGGGGTACACTTTGGTGGAGGAGAATGGGTGCTTGAAGTTGGGTTGGAAGGACCTCTCCTTGCTTACAGCCTCTGCCTGGCAGCCGTTGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001708 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045165 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0090610 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

450

Amino Acids

48.95

Weight (kDa)

5.36

Isoelectric Point (pI)

54.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	87 - 446	4.2e-115	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012030)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41920
fragaria_vesca	FvH4_6g39610
malus_domestica	MD09G1137800.v1.1 MD17G1128300.v1.1
prunus_persica	Prupe.3G187000_v2.0.a1
pyrus_communis	pycom09g05890 pycom17g12050
rosa_chinensis	RchiOBHm_Chr2g0153661
rosa_laevigata	RLG00000020719
rosa_multiflora	Rmu_co8486391.1_g000001 Rmu_sc0000758.1_g000007 Rmu_sc0005823.1_g000002
rosa_roxburghii	Rroxscaffold_2G00094820
rosa_rugosa	Rorug02G0441200
rosa_samantha	Rh2AG504300 Rh2BG515000 Rh2CG490200 Rh2DG527100
rosa_wichuraiana	Rw2G041440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	882
Acc65I	GGTACC	1 cut(s)	428
AccB1I	GGYRCC	2 cut(s)	428, 1046
AccB7I	CCANNNNNTGG	2 cut(s)	568, 781
AccBSI	CCGCTC	1 cut(s)	442
AccI	GTMKAC	2 cut(s)	99, 719
AclWI	GGATC	3 cut(s)	488, 588, 661
AcoI	YGGCCR	1 cut(s)	626
AcsI	RAATTY	2 cut(s)	181, 527
AcuI	CTGAAG	1 cut(s)	383
AcyI	GRCGYC	4 cut(s)	138, 309, 879, 1047
AfaI	GTAC	3 cut(s)	430, 875, 1262
AfiI	CCNNNNNNNGG	8 cut(s)	173, 568, 693, 781, 785, 1117, 1256, 1332
AgeI	ACCGGT	1 cut(s)	220
AgsI	TTSAA	3 cut(s)	487, 1174, 1291
AjiI	CACGTC	3 cut(s)	543, 586, 592
AjnI	CCWGG	4 cut(s)	561, 628, 1056, 1331
AleI	CACNNNNGTG	1 cut(s)	1268
AluBI	AGCT	8 cut(s)	12, 417, 709, 750, 934, 975, 1084, 1230
AluI	AGCT	8 cut(s)	12, 417, 709, 750, 934, 975, 1084, 1230
Alw21I	GWGCWC	2 cut(s)	711, 752
Alw26I	GTCTC	3 cut(s)	244, 724, 919
AlwI	GGATC	3 cut(s)	488, 588, 661
AlwNI	CAGNNNCTG	5 cut(s)	420, 568, 781, 1084, 1328
Ama87I	CYCGRG	2 cut(s)	713, 1031
AoxI	GGCC	7 cut(s)	616, 626, 757, 840, 996, 1124, 1190
ApaI	GGGCCC	1 cut(s)	1194
ApeKI	GCWGC	6 cut(s)	475, 888, 972, 1078, 1081, 1336
ApoI	RAATTY	2 cut(s)	181, 527
AsiGI	ACCGGT	1 cut(s)	220
Asp718I	GGTACC	1 cut(s)	428
AspLEI	GCGC	9 cut(s)	96, 278, 397, 568, 1016, 1018, 1030, 1049, 1222
AspS9I	GGNCC	6 cut(s)	696, 850, 1124, 1190, 1191, 1306
AsuC2I	CCSGG	4 cut(s)	688, 724, 1138, 1214
AsuHPI	GGTGA	5 cut(s)	25, 148, 436, 874, 1156
AsuNHI	GCTAGC	1 cut(s)	1226
AvaI	CYCGRG	2 cut(s)	713, 1031
AvaII	GGWCC	3 cut(s)	696, 850, 1306
BaeGI	GKGCMC	1 cut(s)	1194
BalI	TGGCCA	1 cut(s)	628
BanI	GGYRCC	2 cut(s)	428, 1046
BanII	GRGCYC	4 cut(s)	711, 752, 920, 1194
BbsI	GAAGAC	2 cut(s)	92, 150
Bbv12I	GWGCWC	2 cut(s)	711, 752
BbvI	GCAGC	5 cut(s)	487, 900, 984, 1090, 1093
BccI	CCATC	1 cut(s)	518
BceAI	ACGGC	3 cut(s)	334, 589, 1324
BcgI	CGANNNNNNTGC	4 cut(s)	179, 213, 639, 673
BciT130I	CCWGG	4 cut(s)	563, 630, 1058, 1333
BclI	TGATCA	2 cut(s)	411, 936
BcnI	CCSGG	4 cut(s)	688, 724, 1138, 1214
BcoDI	GTCTC	3 cut(s)	244, 724, 919
BfaI	CTAG	2 cut(s)	521, 1227
BfmI	CTRYAG	1 cut(s)	1009
BfoI	RGCGCY	2 cut(s)	569, 1050
BglI	GCCNNNNNGGC	1 cut(s)	969
Bme1390I	CCNGG	8 cut(s)	563, 630, 688, 724, 1058, 1138, 1214, 1333
Bme18I	GGWCC	3 cut(s)	696, 850, 1306
BmeT110I	CYCGRG	2 cut(s)	713, 1031
BmgBI	CACGTC	3 cut(s)	543, 586, 592
BmgT120I	GGNCC	6 cut(s)	696, 850, 1124, 1190, 1191, 1306
BmiI	GGNNCC	5 cut(s)	430, 697, 1048, 1192, 1211
BmrFI	CCNGG	8 cut(s)	563, 630, 688, 724, 1058, 1138, 1214, 1333
BmsI	GCATC	3 cut(s)	659, 849, 1015
BmtI	GCTAGC	1 cut(s)	1230
BoxI	GACNNNNGTC	1 cut(s)	813
BpiI	GAAGAC	2 cut(s)	92, 150
BpmI	CTGGAG	3 cut(s)	605, 803, 1079
Bpu10I	CCTNAGC	1 cut(s)	424
BpuMI	CCSGG	4 cut(s)	688, 724, 1138, 1214
Bsa29I	ATCGAT	1 cut(s)	597
BsaBI	GATNNNNATC	1 cut(s)	941
BsaHI	GRCGYC	4 cut(s)	138, 309, 879, 1047
BsaI	GGTCTC	1 cut(s)	919
BsaJI	CCNNGG	5 cut(s)	291, 702, 846, 1137, 1250
BsaWI	WCCGGW	1 cut(s)	220
BsaXI	ACNNNNNCTCC	6 cut(s)	50, 80, 421, 451, 1268, 1298
Bsc4I	CCNNNNNNNGG	8 cut(s)	173, 568, 693, 781, 785, 1117, 1256, 1332
Bse118I	RCCGGY	3 cut(s)	113, 220, 884
Bse1I	ACTGG	2 cut(s)	622, 860
Bse3DI	GCAATG	1 cut(s)	865
Bse8I	GATNNNNATC	1 cut(s)	941
BseBI	CCWGG	4 cut(s)	563, 630, 1058, 1333
BseCI	ATCGAT	1 cut(s)	597
BseDI	CCNNGG	5 cut(s)	291, 702, 846, 1137, 1250
BseGI	GGATG	4 cut(s)	642, 864, 1171, 1248
BseJI	GATNNNNATC	1 cut(s)	941
BseLI	CCNNNNNNNGG	8 cut(s)	173, 568, 693, 781, 785, 1117, 1256, 1332
BseMI	GCAATG	1 cut(s)	865
BseMII	CTCAG	5 cut(s)	318, 482, 896, 914, 971
BseNI	ACTGG	2 cut(s)	622, 860
BsePI	GCGCGC	1 cut(s)	1014
BseRI	GAGGAG	7 cut(s)	58, 61, 64, 67, 691, 701, 1289
BseSI	GKGCMC	1 cut(s)	1194
BseXI	GCAGC	5 cut(s)	487, 900, 984, 1090, 1093
BseYI	CCCAGC	1 cut(s)	913
Bsh1285I	CGRYCG	5 cut(s)	103, 208, 659, 723, 945
BshFI	GGCC	7 cut(s)	618, 628, 759, 842, 998, 1126, 1192
BshNI	GGYRCC	2 cut(s)	428, 1046
BshTI	ACCGGT	1 cut(s)	220
BshVI	ATCGAT	1 cut(s)	597
BsiEI	CGRYCG	5 cut(s)	103, 208, 659, 723, 945
BsiHKAI	GWGCWC	2 cut(s)	711, 752
BsiHKCI	CYCGRG	2 cut(s)	713, 1031
BsiSI	CCGG	9 cut(s)	114, 174, 221, 365, 687, 723, 885, 1137, 1214
BslFI	GGGAC	1 cut(s)	1049
BslI	CCNNNNNNNGG	8 cut(s)	173, 568, 693, 781, 785, 1117, 1256, 1332
BsmAI	GTCTC	3 cut(s)	244, 724, 919
BsmFI	GGGAC	1 cut(s)	1049
BsnI	GGCC	7 cut(s)	618, 628, 759, 842, 998, 1126, 1192
Bso31I	GGTCTC	1 cut(s)	919
BsoBI	CYCGRG	2 cut(s)	713, 1031
Bsp120I	GGGCCC	1 cut(s)	1190
Bsp1286I	GDGCHC	4 cut(s)	711, 752, 920, 1194
Bsp143I	GATC	9 cut(s)	205, 330, 411, 480, 580, 666, 671, 936, 942
Bsp19I	CCATGG	1 cut(s)	291
Bsp68I	TCGCGA	1 cut(s)	746
BspANI	GGCC	7 cut(s)	618, 628, 759, 842, 998, 1126, 1192
BspCNI	CTCAG	5 cut(s)	319, 481, 897, 915, 972
BspDI	ATCGAT	1 cut(s)	597
BspLI	GGNNCC	5 cut(s)	430, 697, 1048, 1192, 1211
BspOI	GCTAGC	1 cut(s)	1230
BspPI	GGATC	3 cut(s)	488, 588, 661
BspT107I	GGYRCC	2 cut(s)	428, 1046
BspTNI	GGTCTC	1 cut(s)	919
BsrBI	CCGCTC	1 cut(s)	442
BsrDI	GCAATG	1 cut(s)	865
BsrFI	RCCGGY	3 cut(s)	113, 220, 884
BsrI	ACTGG	2 cut(s)	622, 860
BssAI	RCCGGY	3 cut(s)	113, 220, 884
BssECI	CCNNGG	5 cut(s)	291, 702, 846, 1137, 1250
BssHII	GCGCGC	1 cut(s)	1014
BssMI	GATC	9 cut(s)	205, 330, 411, 480, 580, 666, 671, 936, 942
BssNI	GRCGYC	4 cut(s)	138, 309, 879, 1047
BssT1I	CCWWGG	1 cut(s)	291
Bst2UI	CCWGG	4 cut(s)	563, 630, 1058, 1333
Bst4CI	ACNGT	2 cut(s)	255, 847
Bst6I	CTCTTC	1 cut(s)	1124
BstACI	GRCGYC	4 cut(s)	138, 309, 879, 1047
BstDEI	CTNAG	8 cut(s)	13, 327, 424, 468, 812, 905, 923, 980
BstDSI	CCRYGG	3 cut(s)	291, 846, 1250
BstF5I	GGATG	4 cut(s)	642, 864, 1171, 1248
BstH2I	RGCGCY	2 cut(s)	569, 1050
BstHHI	GCGC	9 cut(s)	96, 278, 397, 568, 1016, 1018, 1030, 1049, 1222
BstKTI	GATC	9 cut(s)	208, 333, 414, 483, 583, 669, 674, 939, 945
BstMAI	GTCTC	3 cut(s)	244, 724, 919
BstMBI	GATC	9 cut(s)	205, 330, 411, 480, 580, 666, 671, 936, 942
BstMCI	CGRYCG	5 cut(s)	103, 208, 659, 723, 945
BstNI	CCWGG	4 cut(s)	563, 630, 1058, 1333
BstPAI	GACNNNNGTC	1 cut(s)	813
BstSCI	CCNGG	8 cut(s)	561, 628, 686, 722, 1056, 1136, 1212, 1331
BstSFI	CTRYAG	1 cut(s)	1009
BstSLI	GKGCMC	1 cut(s)	1194
BstV1I	GCAGC	5 cut(s)	487, 900, 984, 1090, 1093
BstV2I	GAAGAC	2 cut(s)	92, 150
BstX2I	RGATCY	2 cut(s)	480, 666
BstYI	RGATCY	2 cut(s)	480, 666
Bsu15I	ATCGAT	1 cut(s)	597
BsuRI	GGCC	7 cut(s)	618, 628, 759, 842, 998, 1126, 1192
BsuTUI	ATCGAT	1 cut(s)	597
BtgI	CCRYGG	3 cut(s)	291, 846, 1250
BtgZI	GCGATG	2 cut(s)	330, 636
BtrI	CACGTC	3 cut(s)	543, 586, 592
BtsCI	GGATG	4 cut(s)	642, 864, 1171, 1248
BtsI	GCAGTG	1 cut(s)	124
BtsIMutI	CAGTG	3 cut(s)	124, 629, 853
BtuMI	TCGCGA	1 cut(s)	746
CaiI	CAGNNNCTG	5 cut(s)	420, 568, 781, 1084, 1328
CfoI	GCGC	9 cut(s)	96, 278, 397, 568, 1016, 1018, 1030, 1049, 1222
Cfr10I	RCCGGY	3 cut(s)	113, 220, 884
Cfr13I	GGNCC	6 cut(s)	696, 850, 1124, 1190, 1191, 1306
ClaI	ATCGAT	1 cut(s)	597
CseI	GACGC	4 cut(s)	85, 146, 317, 910
Csp6I	GTAC	3 cut(s)	429, 874, 1261
CspAI	ACCGGT	1 cut(s)	220
CviAII	CATG	2 cut(s)	82, 292
CviQI	GTAC	3 cut(s)	429, 874, 1261
DdeI	CTNAG	8 cut(s)	13, 327, 424, 468, 812, 905, 923, 980
DinI	GGCGCC	1 cut(s)	1048
DpnI	GATC	9 cut(s)	207, 332, 413, 482, 582, 668, 673, 938, 944
DpnII	GATC	9 cut(s)	205, 330, 411, 480, 580, 666, 671, 936, 942
EaeI	YGGCCR	1 cut(s)	626
Eam1104I	CTCTTC	1 cut(s)	1124
EarI	CTCTTC	1 cut(s)	1124
EciI	GGCGGA	2 cut(s)	242, 742
Ecl136II	GAGCTC	2 cut(s)	709, 750
Eco130I	CCWWGG	1 cut(s)	291
Eco147I	AGGCCT	2 cut(s)	618, 998
Eco24I	GRGCYC	4 cut(s)	711, 752, 920, 1194
Eco31I	GGTCTC	1 cut(s)	919
Eco47I	GGWCC	3 cut(s)	696, 850, 1306
Eco53kI	GAGCTC	2 cut(s)	709, 750
Eco57I	CTGAAG	1 cut(s)	383
Eco88I	CYCGRG	2 cut(s)	713, 1031
EcoICRI	GAGCTC	2 cut(s)	709, 750
EcoO109I	RGGNCCY	2 cut(s)	696, 1306
EcoRII	CCWGG	4 cut(s)	561, 628, 1056, 1331
EcoT14I	CCWWGG	1 cut(s)	291
EcoT38I	GRGCYC	4 cut(s)	711, 752, 920, 1194
EgeI	GGCGCC	1 cut(s)	1048
EheI	GGCGCC	1 cut(s)	1048
ErhI	CCWWGG	1 cut(s)	291
FaeI	CATG	2 cut(s)	85, 295
FaiI	YATR	6 cut(s)	83, 293, 608, 803, 1068, 1070
FaqI	GGGAC	1 cut(s)	1049
FatI	CATG	2 cut(s)	81, 291
FauI	CCCGC	3 cut(s)	1115, 1170, 1199
FauNDI	CATATG	1 cut(s)	1068
FbaI	TGATCA	2 cut(s)	411, 936
FblI	GTMKAC	2 cut(s)	99, 719
FokI	GGATG	4 cut(s)	629, 871, 1178, 1255
FriOI	GRGCYC	4 cut(s)	711, 752, 920, 1194
FspBI	CTAG	2 cut(s)	521, 1227
GlaI	GCGC	9 cut(s)	95, 277, 396, 567, 1015, 1017, 1029, 1048, 1221
GsaI	CCCAGC	1 cut(s)	917
GsuI	CTGGAG	3 cut(s)	605, 803, 1079
HaeII	RGCGCY	2 cut(s)	569, 1050
HaeIII	GGCC	7 cut(s)	618, 628, 759, 842, 998, 1126, 1192
HapII	CCGG	9 cut(s)	114, 174, 221, 365, 687, 723, 885, 1137, 1214
HgaI	GACGC	4 cut(s)	85, 146, 317, 910
HhaI	GCGC	9 cut(s)	96, 278, 397, 568, 1016, 1018, 1030, 1049, 1222
Hin1I	GRCGYC	4 cut(s)	138, 309, 879, 1047
Hin1II	CATG	2 cut(s)	85, 295
Hin6I	GCGC	9 cut(s)	94, 276, 395, 566, 1014, 1016, 1028, 1047, 1220
HinP1I	GCGC	9 cut(s)	94, 276, 395, 566, 1014, 1016, 1028, 1047, 1220
HincII	GTYRAC	3 cut(s)	100, 720, 818
HindII	GTYRAC	3 cut(s)	100, 720, 818
HinfI	GANTC	6 cut(s)	131, 236, 403, 716, 732, 825
HpaII	CCGG	9 cut(s)	114, 174, 221, 365, 687, 723, 885, 1137, 1214
HphI	GGTGA	5 cut(s)	25, 148, 436, 874, 1156
Hpy166II	GTNNAC	6 cut(s)	100, 589, 720, 818, 853, 1263
Hpy188I	TCNGA	8 cut(s)	9, 136, 241, 402, 671, 706, 824, 830
Hpy188III	TCNNGA	5 cut(s)	209, 745, 796, 940, 979
Hpy8I	GTNNAC	6 cut(s)	100, 589, 720, 818, 853, 1263
Hpy99I	CGWCG	9 cut(s)	101, 140, 206, 290, 308, 311, 364, 881, 904
HpyAV	CCTTC	5 cut(s)	163, 775, 1141, 1249, 1297
HpyCH4III	ACNGT	2 cut(s)	255, 847
HpyCH4IV	ACGT	4 cut(s)	542, 585, 591, 879
HpyCH4V	TGCA	4 cut(s)	613, 650, 862, 1003
HpyF3I	CTNAG	8 cut(s)	13, 327, 424, 468, 812, 905, 923, 980
HpySE526I	ACGT	4 cut(s)	542, 585, 591, 879
Hsp92I	GRCGYC	4 cut(s)	138, 309, 879, 1047
Hsp92II	CATG	2 cut(s)	85, 295
HspAI	GCGC	9 cut(s)	94, 276, 395, 566, 1014, 1016, 1028, 1047, 1220
KasI	GGCGCC	1 cut(s)	1046
KpnI	GGTACC	1 cut(s)	432
KroI	GCCGGC	1 cut(s)	113
KroNI	GCCGGC	1 cut(s)	115
Ksp22I	TGATCA	2 cut(s)	411, 936
Kzo9I	GATC	9 cut(s)	205, 330, 411, 480, 580, 666, 671, 936, 942
LmnI	GCTCC	6 cut(s)	367, 422, 706, 714, 798, 1075
Lsp1109I	GCAGC	5 cut(s)	487, 900, 984, 1090, 1093
LweI	GCATC	3 cut(s)	659, 849, 1015
MaeI	CTAG	2 cut(s)	521, 1227
MaeII	ACGT	4 cut(s)	542, 585, 591, 879
MaeIII	GTNAC	3 cut(s)	209, 321, 880
MalI	GATC	9 cut(s)	207, 332, 413, 482, 582, 668, 673, 938, 944
MbiI	CCGCTC	1 cut(s)	442
MboI	GATC	9 cut(s)	205, 330, 411, 480, 580, 666, 671, 936, 942
MboII	GAAGA	6 cut(s)	97, 155, 475, 673, 676, 1141
MflI	RGATCY	2 cut(s)	480, 666
MhlI	GDGCHC	4 cut(s)	711, 752, 920, 1194
MlsI	TGGCCA	1 cut(s)	628
MluCI	AATT	3 cut(s)	169, 181, 527
MluNI	TGGCCA	1 cut(s)	628
Mly113I	GGCGCC	1 cut(s)	1047
MlyI	GAGTC	3 cut(s)	397, 725, 726
MmeI	TCCRAC	3 cut(s)	159, 1280, 1323
Mox20I	TGGCCA	1 cut(s)	628
MroNI	GCCGGC	1 cut(s)	113
MscI	TGGCCA	1 cut(s)	628
MslI	CAYNNNNRTG	1 cut(s)	1268
Msp20I	TGGCCA	1 cut(s)	628
MspA1I	CMGCKG	4 cut(s)	478, 781, 969, 1084
MspI	CCGG	9 cut(s)	114, 174, 221, 365, 687, 723, 885, 1137, 1214
MspR9I	CCNGG	8 cut(s)	563, 630, 688, 724, 1058, 1138, 1214, 1333
MvaI	CCWGG	4 cut(s)	563, 630, 1058, 1333
NaeI	GCCGGC	1 cut(s)	115
NarI	GGCGCC	1 cut(s)	1047
NciI	CCSGG	4 cut(s)	688, 724, 1138, 1214
NcoI	CCATGG	1 cut(s)	291
NdeI	CATATG	1 cut(s)	1068
NdeII	GATC	9 cut(s)	205, 330, 411, 480, 580, 666, 671, 936, 942
NgoMIV	GCCGGC	1 cut(s)	113
NheI	GCTAGC	1 cut(s)	1226
NlaIII	CATG	2 cut(s)	85, 295
NlaIV	GGNNCC	5 cut(s)	430, 697, 1048, 1192, 1211
NmeAIII	GCCGAG	3 cut(s)	304, 735, 973
NmuCI	GTSAC	2 cut(s)	209, 880
NruI	TCGCGA	1 cut(s)	746
OliI	CACNNNNGTG	1 cut(s)	1268
PaeR7I	CTCGAG	1 cut(s)	713
PauI	GCGCGC	1 cut(s)	1014
PceI	AGGCCT	2 cut(s)	618, 998
PcsI	WCGNNNNNNNCGW	2 cut(s)	312, 926
PdiI	GCCGGC	1 cut(s)	115
PfeI	GAWTC	3 cut(s)	131, 236, 825
PflMI	CCANNNNNTGG	2 cut(s)	568, 781
PinAI	ACCGGT	1 cut(s)	220
Ple19I	CGATCG	2 cut(s)	208, 945
PleI	GAGTC	3 cut(s)	397, 724, 726
PluTI	GGCGCC	1 cut(s)	1050
PpsI	GAGTC	3 cut(s)	397, 724, 726
PpuMI	RGGWCCY	2 cut(s)	696, 1306
PshAI	GACNNNNGTC	1 cut(s)	813
Psp124BI	GAGCTC	2 cut(s)	711, 752
Psp5II	RGGWCCY	2 cut(s)	696, 1306
Psp6I	CCWGG	4 cut(s)	561, 628, 1056, 1331
PspFI	CCCAGC	1 cut(s)	913
PspGI	CCWGG	4 cut(s)	561, 628, 1056, 1331
PspN4I	GGNNCC	5 cut(s)	430, 697, 1048, 1192, 1211
PspOMI	GGGCCC	1 cut(s)	1190
PspPI	GGNCC	6 cut(s)	696, 850, 1124, 1190, 1191, 1306
PspPPI	RGGWCCY	2 cut(s)	696, 1306
PspXI	VCTCGAGB	1 cut(s)	713
PstNI	CAGNNNCTG	5 cut(s)	420, 568, 781, 1084, 1328
PsuI	RGATCY	2 cut(s)	480, 666
PteI	GCGCGC	1 cut(s)	1014
PvuI	CGATCG	2 cut(s)	208, 945
PvuII	CAGCTG	1 cut(s)	1084
RruI	TCGCGA	1 cut(s)	746
RsaI	GTAC	3 cut(s)	430, 875, 1262
RsaNI	GTAC	3 cut(s)	429, 874, 1261
RseI	CAYNNNNRTG	1 cut(s)	1268
SacI	GAGCTC	2 cut(s)	711, 752
SalI	GTCGAC	2 cut(s)	98, 718
Sau3AI	GATC	9 cut(s)	205, 330, 411, 480, 580, 666, 671, 936, 942
Sau96I	GGNCC	6 cut(s)	696, 850, 1124, 1190, 1191, 1306
SchI	GAGTC	3 cut(s)	397, 725, 726
ScrFI	CCNGG	8 cut(s)	563, 630, 688, 724, 1058, 1138, 1214, 1333
SduI	GDGCHC	4 cut(s)	711, 752, 920, 1194
SfaNI	GCATC	3 cut(s)	659, 849, 1015
SfcI	CTRYAG	1 cut(s)	1009
SfoI	GGCGCC	1 cut(s)	1048
Sfr274I	CTCGAG	1 cut(s)	713
SinI	GGWCC	3 cut(s)	696, 850, 1306
SlaI	CTCGAG	1 cut(s)	713
SmiMI	CAYNNNNRTG	1 cut(s)	1268
SmlI	CTYRAG	1 cut(s)	713
SmoI	CTYRAG	1 cut(s)	713
Sse9I	AATT	3 cut(s)	169, 181, 527
SseBI	AGGCCT	2 cut(s)	618, 998
SspDI	GGCGCC	1 cut(s)	1046
SspMI	CTAG	2 cut(s)	521, 1227
SstI	GAGCTC	2 cut(s)	711, 752
StuI	AGGCCT	2 cut(s)	618, 998
StyD4I	CCNGG	8 cut(s)	561, 628, 686, 722, 1056, 1136, 1212, 1331
StyI	CCWWGG	1 cut(s)	291
TaaI	ACNGT	2 cut(s)	255, 847
TaiI	ACGT	4 cut(s)	545, 588, 594, 882
TaqI	TCGA	7 cut(s)	99, 303, 597, 659, 714, 719, 768
TaqII	GACCGA	2 cut(s)	847, 943
TasI	AATT	3 cut(s)	169, 181, 527
TauI	GCSGC	5 cut(s)	41, 129, 781, 972, 1220
TfiI	GAWTC	3 cut(s)	131, 236, 825
TscAI	CASTG	3 cut(s)	124, 629, 860
TseFI	GTSAC	2 cut(s)	209, 880
TseI	GCWGC	6 cut(s)	475, 888, 972, 1078, 1081, 1336
Tsp45I	GTSAC	2 cut(s)	209, 880
TspDTI	ATGAA	1 cut(s)	98
TspGWI	ACGGA	2 cut(s)	1053, 1239
TspRI	CASTG	3 cut(s)	124, 629, 860
Van91I	CCANNNNNTGG	2 cut(s)	568, 781
VpaK11BI	GGWCC	3 cut(s)	696, 850, 1306
XapI	RAATTY	2 cut(s)	181, 527
XhoI	CTCGAG	1 cut(s)	713
XmiI	GTMKAC	2 cut(s)	99, 719
XspI	CTAG	2 cut(s)	521, 1227
ZraI	GACGTC	1 cut(s)	880

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.