MD09G1257200.v1.1

Belongs to the phosphohexose mutase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
32908209 .. 32908865
657 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1257200.v1.1.491

Sequence Viewer

Length: 186 bp
ATGGTGAAATTTATTACGCAACTTCATTACTTGCAAAATTTTGTTGAGTCAACATTCAATGCCCTTCCTTCGAATCAAGTTAAAGGTAGGATCGTACTCGAAGAAGTTTGTGAAGGGCCAATGGGACAAGGATTGCAGAAATACAAGGCTTGCCTCTCAGTGCAGATTGTATTAATTTCCCTTTGA

Protein Analysis

62

Amino Acids

6.86

Weight (kDa)

7.8

Isoelectric Point (pI)

42.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0024312)

Species Orthologous Gene IDs
malus_domestica MD09G1257200.v1.1 MD12G1100300.v1.1
pyrus_communis pycom14g14060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 98
AcsI RAATTY 2 cut(s) 8, 37
AfaI GTAC 1 cut(s) 96
AgsI TTSAA 1 cut(s) 58
AlwI GGATC 1 cut(s) 98
AoxI GGCC 1 cut(s) 116
ApoI RAATTY 2 cut(s) 8, 37
AseI ATTAAT 1 cut(s) 173
AspS9I GGNCC 1 cut(s) 116
AsuHPI GGTGA 1 cut(s) 16
AsuII TTCGAA 1 cut(s) 71
BmgT120I GGNCC 1 cut(s) 116
Bpu14I TTCGAA 1 cut(s) 71
BseMII CTCAG 1 cut(s) 171
BsgI GTGCAG 1 cut(s) 182
BshFI GGCC 1 cut(s) 118
BslFI GGGAC 1 cut(s) 138
BsmFI GGGAC 1 cut(s) 138
BsnI GGCC 1 cut(s) 118
Bsp119I TTCGAA 1 cut(s) 71
Bsp143I GATC 1 cut(s) 90
BspANI GGCC 1 cut(s) 118
BspCNI CTCAG 1 cut(s) 170
BspPI GGATC 1 cut(s) 98
BspT104I TTCGAA 1 cut(s) 71
BssMI GATC 1 cut(s) 90
BstBI TTCGAA 1 cut(s) 71
BstC8I GCNNGC 1 cut(s) 151
BstDEI CTNAG 1 cut(s) 157
BstKTI GATC 1 cut(s) 93
BstMBI GATC 1 cut(s) 90
BsuRI GGCC 1 cut(s) 118
BtsIMutI CAGTG 1 cut(s) 165
Cac8I GCNNGC 1 cut(s) 151
Cfr13I GGNCC 1 cut(s) 116
Csp6I GTAC 1 cut(s) 95
CviJI RGCY 2 cut(s) 118, 149
CviKI_1 RGCY 2 cut(s) 118, 149
CviQI GTAC 1 cut(s) 95
DdeI CTNAG 1 cut(s) 157
DpnI GATC 1 cut(s) 92
DpnII GATC 1 cut(s) 90
FaqI GGGAC 1 cut(s) 138
HaeIII GGCC 1 cut(s) 118
HincII GTYRAC 1 cut(s) 51
HindII GTYRAC 1 cut(s) 51
HinfI GANTC 2 cut(s) 47, 73
HphI GGTGA 1 cut(s) 16
Hpy166II GTNNAC 1 cut(s) 51
Hpy8I GTNNAC 1 cut(s) 51
HpyAV CCTTC 3 cut(s) 74, 78, 107
HpyCH4V TGCA 3 cut(s) 34, 136, 163
HpyF3I CTNAG 1 cut(s) 157
Kzo9I GATC 1 cut(s) 90
MalI GATC 1 cut(s) 92
MboI GATC 1 cut(s) 90
MboII GAAGA 1 cut(s) 113
MluCI AATT 3 cut(s) 8, 37, 174
MlyI GAGTC 1 cut(s) 56
MnlI CCTC 1 cut(s) 164
MseI TTAA 2 cut(s) 81, 173
NdeII GATC 1 cut(s) 90
NspV TTCGAA 1 cut(s) 71
PfeI GAWTC 1 cut(s) 73
PleI GAGTC 1 cut(s) 55
PpsI GAGTC 1 cut(s) 55
PshBI ATTAAT 1 cut(s) 173
PspPI GGNCC 1 cut(s) 116
RsaI GTAC 1 cut(s) 96
RsaNI GTAC 1 cut(s) 95
SaqAI TTAA 2 cut(s) 81, 173
Sau3AI GATC 1 cut(s) 90
Sau96I GGNCC 1 cut(s) 116
SchI GAGTC 1 cut(s) 56
SetI ASST 1 cut(s) 88
SfuI TTCGAA 1 cut(s) 71
SgeI CNNG 6 cut(s) 43, 89, 110, 140, 157, 162
Sse9I AATT 3 cut(s) 8, 37, 174
TaqI TCGA 2 cut(s) 71, 99
TasI AATT 3 cut(s) 8, 37, 174
TfiI GAWTC 1 cut(s) 73
Tru1I TTAA 2 cut(s) 81, 173
Tru9I TTAA 2 cut(s) 81, 173
TscAI CASTG 1 cut(s) 165
TspDTI ATGAA 1 cut(s) 14
TspRI CASTG 1 cut(s) 165
VspI ATTAAT 1 cut(s) 173
XapI RAATTY 2 cut(s) 8, 37
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.