Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0015124

Physical Location & Seq

Genomic Coordinates Forward (+)

1596750 .. 1601751

Gene Structure 5002 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1011800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGCAACTTTGGTTGCAATGCCCAAGATTCGAATGAAGGTTAGAGTTTTCCCAGATGTTTTTCCTCCATTTTTCCCCCAATCCCCCAGCAAAGTCTCAGTCTTCCATGGAAGGAGAAAGAGTTTCTCAGTCTCTGCTGCGTCGACCCAACATCCAGTACGCGTTCGCTTCGCTCCCTCTCCCACCGGGAATCTCCACGTCGGTGGAGCTAGAACTGCGCTCTTCAATTATCTGTTTGCCAGGTCCAATGGAGGGAAGTTTGTTTTGAGAATTGAAGACACTGATTTGGAGAGGTCTACTAAGGAGTCTGAGGAGGCTGTGTTAAATGATCTCTCTTGGCTTGGCCTTGATTGGGATGAAGGACCCGGTGTTGATGGAGACTATGGTCCGTACAGACAATCAGAAAGAAATTCGTTGTACAAGCAATATGCTGAGAAGCTCTTAGAATCTGATCATGTCTATCGCTGCTTTTGCTCTAGTGAGGAACTAGAAAAAATGAAGGAGATTGCAAAACTAAAACAACTGCCACCAGTATACACTGGGAAGTGGGCCAATGCAACAGACAAAGAAGTACAAGAAGAGCTGGAAAGAGGAACTAGTTACACATATCGGTTTCGTGTGCCAAAGGAAGGAAGTTTAAAAATCAATGACCTTATTCGAGGCGAGGTCAGTTGGAACTTGAATACTCTTGGAGATTTTGTAATTATGAGAAGCAATGGTCAACCAGTGTACAATTTTTGTGTCACAGTCGATGATGCTACTATGGCCATCTCACATGTTATTAGAGCAGAGGAGCATTTACCAAATACCCTAAGGCAAGCATTAATATATAAGGCTCTAGGATTCCAAATGCCTGACTTTGCACATGTTTCCTTAATTCTTGCACCTGATCGGAGTAAACTGTCAAAGAGGCATGGCGCTACTTCAGTGGGCCAGGTGTACAGGGAGATGGGCTATCTACCCCAGGCAATGGTGAACTACTTGGCACTGTTAGGTTGGGGTGACGGCACTGAAAATGAATTCTTCACCCTTGAGCAACTTGTTGAGAAATTTTCAATTGGTCGCGTCAACAAAAGTGGTGCCATTTTCGACTCTACCAAATTAAGGTGGATGAATGGTCAACACTTAAGAGCACTTCCATCGGAGCAGTTGACAAAGCTTATTGGTGAGCAGTGGAAAAGCACTGGCATCCTTACAGAAGCAGAGGGCTCATTTATTGAAGAGGCAGTAGAGCTACTCAAGGATGGGATCGATTTAACACCAGATTCAGATAAAGCCCTCTCAAACTTGTTGTCTTATCCTTTTCATGACACTTTATCCAGTGTTGAAGCCAAACCAGTCTTAGAAGACAAACTTTCTGAGTTTGCTGCAAGTTTCATTGCTGCTTATGACAGCGGCGAACTCATTGGTGCCCTTGAAGAAGGCCATGCTGGTTGGCAAAAGTGGGTTAAGAGCTTTGGCAAATCACTAAAGCGCAAGGGGAAATCACTGTTCATGCCTCTCCGAGTGCTGTTAACAGGAAAGTTGCATGGCCCGGATATGGGGACTAGCGTGCTTTTACTGCACAAAGCTGGAAAGTCTGGTATTATCGCTCCTCAAGCCGGTTTTGTGACGTTAGATGAAAGGTTCAAACTTTTGAGAGAAGTCGACTGGGAAGCATTAATTAGGGATCAGCCTCTCCTGGAGGCTGCCACCATATCAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006424 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0035670 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0071704 GO:0071840 GO:0090304 GO:0090567 GO:0099402 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00860 ko00970 ko01100 ko01110 ko01120 map00860 map00970 map01100 map01110 map01120

Pfam Domains

Protein Families

tRNA-synt_1c

Protein Analysis

569

Amino Acids

63.59

Weight (kDa)

6.53

Isoelectric Point (pI)

36.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1c	PF00749	53 - 370	3.3e-102	tRNA synthetases class I (E and Q), catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64050
fragaria_vesca	FvH4_2g14910
malus_domestica	MD05G1011800.v1.1 MD10G1011800.v1.1
prunus_persica	Prupe.8G016800_v2.0.a1 Prupe.8G016800_v2.0.a1
pyrus_communis	pycom05g00680
rosa_chinensis	RchiOBHm_Chr6g0277491
rosa_laevigata	RLG00000013297
rosa_multiflora	Rmu_sc0017670.1_g000002
rosa_roxburghii	Rroxscaffold_7G00191270
rosa_rugosa	Rorug06G0108700
rosa_samantha	Rh6BG223400 Rh6CG225900 Rh6DG216200
rosa_wichuraiana	Rw6G019220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1079, 1409
AccB7I	CCANNNNNTGG	1 cut(s)	970
AccI	GTMKAC	4 cut(s)	143, 296, 534, 1647
AccII	CGCG	2 cut(s)	162, 1065
AciI	CCGC	1 cut(s)	1395
AclWI	GGATC	2 cut(s)	1256, 1677
AcoI	YGGCCR	1 cut(s)	765
AcsI	RAATTY	3 cut(s)	409, 1019, 1049
AcuI	CTGAAG	1 cut(s)	909
AfaI	GTAC	6 cut(s)	159, 392, 419, 573, 731, 941
AfiI	CCNNNNNNNGG	8 cut(s)	252, 352, 629, 970, 1104, 1540, 1541, 1601
AflII	CTTAAG	1 cut(s)	1126
AflIII	ACRYGT	3 cut(s)	160, 775, 865
AgsI	TTSAA	8 cut(s)	226, 275, 682, 1056, 1220, 1328, 1418, 1630
AhlI	ACTAGT	1 cut(s)	596
AjiI	CACGTC	1 cut(s)	199
AjnI	CCWGG	4 cut(s)	239, 933, 963, 1680
AleI	CACNNNNGTG	1 cut(s)	201
AluBI	AGCT	7 cut(s)	209, 439, 583, 1159, 1234, 1455, 1571
AluI	AGCT	7 cut(s)	209, 439, 583, 1159, 1234, 1455, 1571
Alw21I	GWGCWC	1 cut(s)	1135
Alw26I	GTCTC	3 cut(s)	100, 136, 372
AlwI	GGATC	2 cut(s)	1256, 1677
AlwNI	CAGNNNCTG	1 cut(s)	134
AoxI	GGCC	6 cut(s)	343, 549, 765, 931, 1423, 1531
ApeKI	GCWGC	5 cut(s)	137, 465, 1367, 1382, 1688
ApoI	RAATTY	3 cut(s)	409, 1019, 1049
ArsI	GACNNNNNNTTYG	4 cut(s)	84, 116, 1277, 1309
AseI	ATTAAT	2 cut(s)	824, 1661
AspLEI	GCGC	3 cut(s)	220, 920, 1476
AspS9I	GGNCC	6 cut(s)	243, 362, 386, 549, 931, 1532
AsuC2I	CCSGG	3 cut(s)	187, 366, 1535
AsuHPI	GGTGA	4 cut(s)	985, 1013, 1018, 1178
AsuII	TTCGAA	1 cut(s)	31
AvaII	GGWCC	3 cut(s)	243, 362, 386
AxyI	CCTNAGG	1 cut(s)	812
BaeGI	GKGCMC	1 cut(s)	1414
BalI	TGGCCA	1 cut(s)	767
BanI	GGYRCC	2 cut(s)	1079, 1409
BanII	GRGCYC	1 cut(s)	1211
BbsI	GAAGAC	3 cut(s)	94, 282, 1353
Bbv12I	GWGCWC	1 cut(s)	1135
BbvI	GCAGC	5 cut(s)	124, 452, 1354, 1369, 1675
BccI	CCATC	5 cut(s)	368, 776, 943, 1147, 1238
BceAI	ACGGC	1 cut(s)	1021
BcgI	CGANNNNNNTGC	2 cut(s)	1122, 1156
BciT130I	CCWGG	4 cut(s)	241, 935, 965, 1682
BclI	TGATCA	1 cut(s)	451
BcnI	CCSGG	3 cut(s)	187, 366, 1535
BcoDI	GTCTC	3 cut(s)	100, 136, 372
BcuI	ACTAGT	1 cut(s)	596
BfaI	CTAG	6 cut(s)	210, 477, 488, 597, 839, 1548
BfoI	RGCGCY	1 cut(s)	921
BfrI	CTTAAG	1 cut(s)	1126
BisI	GCNGC	6 cut(s)	138, 466, 1368, 1383, 1396, 1689
BlsI	GCNGC	6 cut(s)	139, 467, 1369, 1384, 1397, 1690
Bme1390I	CCNGG	7 cut(s)	187, 241, 366, 935, 965, 1535, 1682
Bme18I	GGWCC	3 cut(s)	243, 362, 386
BmgBI	CACGTC	1 cut(s)	199
BmgT120I	GGNCC	6 cut(s)	243, 362, 386, 549, 931, 1532
BmiI	GGNNCC	3 cut(s)	364, 1081, 1411
BmrFI	CCNGG	7 cut(s)	187, 241, 366, 935, 965, 1535, 1682
BmrI	ACTGGG	2 cut(s)	549, 1660
BmsI	GCATC	2 cut(s)	745, 1197
BmuI	ACTGGG	2 cut(s)	549, 1660
BoxI	GACNNNNGTC	1 cut(s)	384
BpiI	GAAGAC	3 cut(s)	94, 282, 1353
BpmI	CTGGAG	1 cut(s)	1703
Bpu14I	TTCGAA	1 cut(s)	31
BpuEI	CTTGAG	3 cut(s)	1052, 1223, 1581
BpuMI	CCSGG	3 cut(s)	187, 366, 1535
Bsa29I	ATCGAT	1 cut(s)	1251
BsaJI	CCNNGG	2 cut(s)	106, 963
BsaXI	ACNNNNNCTCC	6 cut(s)	106, 136, 305, 335, 684, 714
Bsc4I	CCNNNNNNNGG	8 cut(s)	252, 352, 629, 970, 1104, 1540, 1541, 1601
Bse118I	RCCGGY	1 cut(s)	1601
Bse1I	ACTGG	8 cut(s)	155, 530, 544, 725, 1189, 1320, 1337, 1655
Bse21I	CCTNAGG	1 cut(s)	812
Bse3DI	GCAATG	4 cut(s)	24, 721, 975, 1377
BseBI	CCWGG	4 cut(s)	241, 935, 965, 1682
BseCI	ATCGAT	1 cut(s)	1251
BseDI	CCNNGG	2 cut(s)	106, 963
BseGI	GGATG	5 cut(s)	151, 361, 1116, 1188, 1249
BseLI	CCNNNNNNNGG	8 cut(s)	252, 352, 629, 970, 1104, 1540, 1541, 1601
BseMI	GCAATG	4 cut(s)	24, 721, 975, 1377
BseMII	CTCAG	5 cut(s)	111, 141, 300, 423, 1350
BseNI	ACTGG	8 cut(s)	155, 530, 544, 725, 1189, 1320, 1337, 1655
BseRI	GAGGAG	3 cut(s)	326, 806, 1584
BseSI	GKGCMC	1 cut(s)	1414
BseXI	GCAGC	5 cut(s)	124, 452, 1354, 1369, 1675
BseYI	CCCAGC	1 cut(s)	86
BsgI	GTGCAG	1 cut(s)	1547
Bsh1236I	CGCG	2 cut(s)	162, 1065
BshFI	GGCC	6 cut(s)	345, 551, 767, 933, 1425, 1533
BshNI	GGYRCC	2 cut(s)	1079, 1409
BshVI	ATCGAT	1 cut(s)	1251
BsiHKAI	GWGCWC	1 cut(s)	1135
BsiSI	CCGG	4 cut(s)	186, 366, 1535, 1602
BslFI	GGGAC	1 cut(s)	1558
BslI	CCNNNNNNNGG	8 cut(s)	252, 352, 629, 970, 1104, 1540, 1541, 1601
BsmAI	GTCTC	3 cut(s)	100, 136, 372
BsmFI	GGGAC	1 cut(s)	1558
BsnI	GGCC	6 cut(s)	345, 551, 767, 933, 1425, 1533
Bsp119I	TTCGAA	1 cut(s)	31
Bsp1286I	GDGCHC	3 cut(s)	1135, 1211, 1414
Bsp1407I	TGTACA	3 cut(s)	417, 729, 939
Bsp143I	GATC	5 cut(s)	328, 451, 889, 1248, 1669
Bsp19I	CCATGG	1 cut(s)	106
BspACI	CCGC	1 cut(s)	1395
BspANI	GGCC	6 cut(s)	345, 551, 767, 933, 1425, 1533
BspCNI	CTCAG	5 cut(s)	110, 140, 301, 424, 1351
BspDI	ATCGAT	1 cut(s)	1251
BspFNI	CGCG	2 cut(s)	162, 1065
BspHI	TCATGA	1 cut(s)	1306
BspLI	GGNNCC	3 cut(s)	364, 1081, 1411
BspPI	GGATC	2 cut(s)	1256, 1677
BspQI	GCTCTTC	2 cut(s)	227, 573
BspT104I	TTCGAA	1 cut(s)	31
BspT107I	GGYRCC	2 cut(s)	1079, 1409
BspTI	CTTAAG	1 cut(s)	1126
BsrDI	GCAATG	4 cut(s)	24, 721, 975, 1377
BsrFI	RCCGGY	1 cut(s)	1601
BsrGI	TGTACA	3 cut(s)	417, 729, 939
BsrI	ACTGG	8 cut(s)	155, 530, 544, 725, 1189, 1320, 1337, 1655
BssAI	RCCGGY	1 cut(s)	1601
BssECI	CCNNGG	2 cut(s)	106, 963
BssMI	GATC	5 cut(s)	328, 451, 889, 1248, 1669
BssNAI	GTATAC	1 cut(s)	535
BssT1I	CCWWGG	1 cut(s)	106
Bst1107I	GTATAC	1 cut(s)	535
Bst2UI	CCWGG	4 cut(s)	241, 935, 965, 1682
Bst4CI	ACNGT	4 cut(s)	748, 903, 990, 1491
Bst6I	CTCTTC	3 cut(s)	227, 573, 1215
BstAFI	CTTAAG	1 cut(s)	1126
BstAUI	TGTACA	3 cut(s)	417, 729, 939
BstBI	TTCGAA	1 cut(s)	31
BstC8I	GCNNGC	2 cut(s)	819, 1553
BstDEI	CTNAG	9 cut(s)	97, 127, 300, 309, 432, 442, 812, 1342, 1359
BstDSI	CCRYGG	1 cut(s)	106
BstF5I	GGATG	5 cut(s)	151, 361, 1116, 1188, 1249
BstFNI	CGCG	2 cut(s)	162, 1065
BstH2I	RGCGCY	1 cut(s)	921
BstHHI	GCGC	3 cut(s)	220, 920, 1476
BstKTI	GATC	5 cut(s)	331, 454, 892, 1251, 1672
BstMAI	GTCTC	3 cut(s)	100, 136, 372
BstMBI	GATC	5 cut(s)	328, 451, 889, 1248, 1669
BstMWI	GCNNNNNNNGC	5 cut(s)	215, 471, 764, 1561, 1598
BstNI	CCWGG	4 cut(s)	241, 935, 965, 1682
BstNSI	RCATGY	2 cut(s)	779, 869
BstPAI	GACNNNNGTC	1 cut(s)	384
BstSCI	CCNGG	7 cut(s)	185, 239, 364, 933, 963, 1533, 1680
BstSLI	GKGCMC	1 cut(s)	1414
BstUI	CGCG	2 cut(s)	162, 1065
BstV1I	GCAGC	5 cut(s)	124, 452, 1354, 1369, 1675
BstV2I	GAAGAC	3 cut(s)	94, 282, 1353
BstXI	CCANNNNNNTGG	1 cut(s)	203
BstZ17I	GTATAC	1 cut(s)	535
Bsu15I	ATCGAT	1 cut(s)	1251
Bsu36I	CCTNAGG	1 cut(s)	812
BsuRI	GGCC	6 cut(s)	345, 551, 767, 933, 1425, 1533
BsuTUI	ATCGAT	1 cut(s)	1251
BtgI	CCRYGG	1 cut(s)	106
BtrI	CACGTC	1 cut(s)	199
BtsCI	GGATG	5 cut(s)	151, 361, 1116, 1188, 1249
BtsI	GCAGTG	1 cut(s)	1178
Cac8I	GCNNGC	2 cut(s)	819, 1553
CaiI	CAGNNNCTG	1 cut(s)	134
CciI	TCATGA	1 cut(s)	1306
CfoI	GCGC	3 cut(s)	220, 920, 1476
Cfr10I	RCCGGY	1 cut(s)	1601
Cfr13I	GGNCC	6 cut(s)	243, 362, 386, 549, 931, 1532
ClaI	ATCGAT	1 cut(s)	1251
CseI	GACGC	2 cut(s)	129, 1054
Csp6I	GTAC	6 cut(s)	158, 391, 418, 572, 730, 940
CspCI	CAANNNNNGTGG	2 cut(s)	1057, 1092
CviAII	CATG	9 cut(s)	107, 455, 776, 866, 914, 1307, 1427, 1495, 1529
CviQI	GTAC	6 cut(s)	158, 391, 418, 572, 730, 940
DdeI	CTNAG	9 cut(s)	97, 127, 300, 309, 432, 442, 812, 1342, 1359
DpnI	GATC	5 cut(s)	330, 453, 891, 1250, 1671
DpnII	GATC	5 cut(s)	328, 451, 889, 1248, 1669
DraI	TTTAAA	1 cut(s)	639
EaeI	YGGCCR	1 cut(s)	765
Eam1104I	CTCTTC	3 cut(s)	227, 573, 1215
EarI	CTCTTC	3 cut(s)	227, 573, 1215
Eco130I	CCWWGG	1 cut(s)	106
Eco24I	GRGCYC	1 cut(s)	1211
Eco47I	GGWCC	3 cut(s)	243, 362, 386
Eco57I	CTGAAG	1 cut(s)	909
Eco81I	CCTNAGG	1 cut(s)	812
EcoO109I	RGGNCCY	1 cut(s)	362
EcoRI	GAATTC	1 cut(s)	1019
EcoRII	CCWGG	4 cut(s)	239, 933, 963, 1680
EcoT14I	CCWWGG	1 cut(s)	106
EcoT38I	GRGCYC	1 cut(s)	1211
ErhI	CCWWGG	1 cut(s)	106
FaeI	CATG	9 cut(s)	110, 458, 779, 869, 917, 1310, 1430, 1498, 1532
FalI	AAGNNNNNCTT	2 cut(s)	1338, 1370
FaqI	GGGAC	1 cut(s)	1558
FatI	CATG	9 cut(s)	106, 454, 775, 865, 913, 1306, 1426, 1494, 1528
FbaI	TGATCA	1 cut(s)	451
FblI	GTMKAC	4 cut(s)	143, 296, 534, 1647
Fnu4HI	GCNGC	6 cut(s)	138, 466, 1368, 1383, 1396, 1689
FokI	GGATG	5 cut(s)	138, 368, 1123, 1175, 1256
FriOI	GRGCYC	1 cut(s)	1211
Fsp4HI	GCNGC	6 cut(s)	138, 466, 1368, 1383, 1396, 1689
FspBI	CTAG	6 cut(s)	210, 477, 488, 597, 839, 1548
GlaI	GCGC	3 cut(s)	219, 919, 1475
GluI	GCNGC	6 cut(s)	138, 466, 1368, 1383, 1396, 1689
GsaI	CCCAGC	1 cut(s)	90
GsuI	CTGGAG	1 cut(s)	1703
HaeII	RGCGCY	1 cut(s)	921
HaeIII	GGCC	6 cut(s)	345, 551, 767, 933, 1425, 1533
HapII	CCGG	4 cut(s)	186, 366, 1535, 1602
HgaI	GACGC	2 cut(s)	129, 1054
HhaI	GCGC	3 cut(s)	220, 920, 1476
Hin1II	CATG	9 cut(s)	110, 458, 779, 869, 917, 1310, 1430, 1498, 1532
Hin6I	GCGC	3 cut(s)	218, 918, 1474
HinP1I	GCGC	3 cut(s)	218, 918, 1474
HincII	GTYRAC	7 cut(s)	144, 722, 1069, 1121, 1152, 1515, 1648
HindII	GTYRAC	7 cut(s)	144, 722, 1069, 1121, 1152, 1515, 1648
HindIII	AAGCTT	1 cut(s)	1157
HinfI	GANTC	7 cut(s)	28, 190, 305, 446, 843, 1091, 1265
HpaI	GTTAAC	1 cut(s)	1515
HpaII	CCGG	4 cut(s)	186, 366, 1535, 1602
HphI	GGTGA	4 cut(s)	985, 1013, 1018, 1178
Hpy188I	TCNGA	8 cut(s)	310, 403, 451, 894, 1144, 1270, 1360, 1505
Hpy188III	TCNNGA	1 cut(s)	1307
Hpy99I	CGWCG	2 cut(s)	145, 203
HpyAV	CCTTC	6 cut(s)	31, 105, 353, 493, 623, 1415
HpyCH4III	ACNGT	4 cut(s)	748, 903, 990, 1491
HpyCH4IV	ACGT	2 cut(s)	198, 1613
HpyCH4V	TGCA	8 cut(s)	17, 509, 557, 863, 884, 1370, 1528, 1564
HpyF10VI	GCNNNNNNNGC	5 cut(s)	215, 471, 764, 1561, 1598
HpyF3I	CTNAG	9 cut(s)	97, 127, 300, 309, 432, 442, 812, 1342, 1359
HpySE526I	ACGT	2 cut(s)	198, 1613
Hsp92II	CATG	9 cut(s)	110, 458, 779, 869, 917, 1310, 1430, 1498, 1532
HspAI	GCGC	3 cut(s)	218, 918, 1474
Ksp22I	TGATCA	1 cut(s)	451
KspAI	GTTAAC	1 cut(s)	1515
Kzo9I	GATC	5 cut(s)	328, 451, 889, 1248, 1669
LguI	GCTCTTC	2 cut(s)	227, 573
LmnI	GCTCC	5 cut(s)	178, 206, 793, 1144, 1597
Lsp1109I	GCAGC	5 cut(s)	124, 452, 1354, 1369, 1675
LweI	GCATC	2 cut(s)	745, 1197
MaeI	CTAG	6 cut(s)	210, 477, 488, 597, 839, 1548
MaeII	ACGT	2 cut(s)	198, 1613
MaeIII	GTNAC	4 cut(s)	599, 742, 1001, 1609
MalI	GATC	5 cut(s)	330, 453, 891, 1250, 1671
MboI	GATC	5 cut(s)	328, 451, 889, 1248, 1669
MboII	GAAGA	8 cut(s)	94, 214, 287, 590, 1015, 1232, 1358, 1430
MfeI	CAATTG	1 cut(s)	1056
MhlI	GDGCHC	3 cut(s)	1135, 1211, 1414
MlsI	TGGCCA	1 cut(s)	767
MluI	ACGCGT	1 cut(s)	160
MluNI	TGGCCA	1 cut(s)	767
MlyI	GAGTC	2 cut(s)	314, 1085
MmeI	TCCRAC	1 cut(s)	653
Mox20I	TGGCCA	1 cut(s)	767
MscI	TGGCCA	1 cut(s)	767
MslI	CAYNNNNRTG	1 cut(s)	201
Msp20I	TGGCCA	1 cut(s)	767
MspA1I	CMGCKG	1 cut(s)	1395
MspCI	CTTAAG	1 cut(s)	1126
MspI	CCGG	4 cut(s)	186, 366, 1535, 1602
MspR9I	CCNGG	7 cut(s)	187, 241, 366, 935, 965, 1535, 1682
MunI	CAATTG	1 cut(s)	1056
MvaI	CCWGG	4 cut(s)	241, 935, 965, 1682
MvnI	CGCG	2 cut(s)	162, 1065
MwoI	GCNNNNNNNGC	5 cut(s)	215, 471, 764, 1561, 1598
NciI	CCSGG	3 cut(s)	187, 366, 1535
NcoI	CCATGG	1 cut(s)	106
NdeII	GATC	5 cut(s)	328, 451, 889, 1248, 1669
NlaIII	CATG	9 cut(s)	110, 458, 779, 869, 917, 1310, 1430, 1498, 1532
NlaIV	GGNNCC	3 cut(s)	364, 1081, 1411
NmuCI	GTSAC	3 cut(s)	742, 1001, 1609
NspI	RCATGY	2 cut(s)	779, 869
NspV	TTCGAA	1 cut(s)	31
OliI	CACNNNNGTG	1 cut(s)	201
PagI	TCATGA	1 cut(s)	1306
PciI	ACATGT	2 cut(s)	775, 865
PciSI	GCTCTTC	2 cut(s)	227, 573
PfeI	GAWTC	5 cut(s)	28, 190, 446, 843, 1265
PflMI	CCANNNNNTGG	1 cut(s)	970
PfoI	TCCNGGA	1 cut(s)	1680
PkrI	GCNGC	6 cut(s)	139, 467, 1369, 1384, 1397, 1690
PleI	GAGTC	2 cut(s)	313, 1085
PpsI	GAGTC	2 cut(s)	313, 1085
PpuMI	RGGWCCY	1 cut(s)	362
PscI	ACATGT	2 cut(s)	775, 865
PshAI	GACNNNNGTC	1 cut(s)	384
PshBI	ATTAAT	2 cut(s)	824, 1661
Psp5II	RGGWCCY	1 cut(s)	362
Psp6I	CCWGG	4 cut(s)	239, 933, 963, 1680
PspFI	CCCAGC	1 cut(s)	86
PspGI	CCWGG	4 cut(s)	239, 933, 963, 1680
PspN4I	GGNNCC	3 cut(s)	364, 1081, 1411
PspPI	GGNCC	6 cut(s)	243, 362, 386, 549, 931, 1532
PspPPI	RGGWCCY	1 cut(s)	362
PstNI	CAGNNNCTG	1 cut(s)	134
RsaI	GTAC	6 cut(s)	159, 392, 419, 573, 731, 941
RsaNI	GTAC	6 cut(s)	158, 391, 418, 572, 730, 940
RseI	CAYNNNNRTG	1 cut(s)	201
SalI	GTCGAC	2 cut(s)	142, 1646
SapI	GCTCTTC	2 cut(s)	227, 573
SatI	GCNGC	6 cut(s)	138, 466, 1368, 1383, 1396, 1689
Sau3AI	GATC	5 cut(s)	328, 451, 889, 1248, 1669
Sau96I	GGNCC	6 cut(s)	243, 362, 386, 549, 931, 1532
SchI	GAGTC	2 cut(s)	314, 1085
ScrFI	CCNGG	7 cut(s)	187, 241, 366, 935, 965, 1535, 1682
SduI	GDGCHC	3 cut(s)	1135, 1211, 1414
SfaNI	GCATC	2 cut(s)	745, 1197
SfuI	TTCGAA	1 cut(s)	31
SinI	GGWCC	3 cut(s)	243, 362, 386
SmiMI	CAYNNNNRTG	1 cut(s)	201
SmlI	CTYRAG	4 cut(s)	1031, 1126, 1238, 1596
SmoI	CTYRAG	4 cut(s)	1031, 1126, 1238, 1596
SpeI	ACTAGT	1 cut(s)	596
SsiI	CCGC	1 cut(s)	1395
SspMI	CTAG	6 cut(s)	210, 477, 488, 597, 839, 1548
StyD4I	CCNGG	7 cut(s)	185, 239, 364, 933, 963, 1533, 1680
StyI	CCWWGG	1 cut(s)	106
TaaI	ACNGT	4 cut(s)	748, 903, 990, 1491
TaiI	ACGT	2 cut(s)	201, 1616
TaqI	TCGA	7 cut(s)	31, 143, 658, 750, 1089, 1251, 1647
TatI	WGTACW	4 cut(s)	417, 571, 729, 939
TauI	GCSGC	1 cut(s)	1398
TfiI	GAWTC	5 cut(s)	28, 190, 446, 843, 1265
TseFI	GTSAC	3 cut(s)	742, 1001, 1609
TseI	GCWGC	5 cut(s)	137, 465, 1367, 1382, 1688
Tsp45I	GTSAC	3 cut(s)	742, 1001, 1609
TspDTI	ATGAA	9 cut(s)	50, 372, 512, 1032, 1127, 1295, 1366, 1483, 1635
TspGWI	ACGGA	1 cut(s)	378
Van91I	CCANNNNNTGG	1 cut(s)	970
Vha464I	CTTAAG	1 cut(s)	1126
VpaK11BI	GGWCC	3 cut(s)	243, 362, 386
VspI	ATTAAT	2 cut(s)	824, 1661
XapI	RAATTY	3 cut(s)	409, 1019, 1049
XceI	RCATGY	2 cut(s)	779, 869
XmiI	GTMKAC	4 cut(s)	143, 296, 534, 1647
XspI	CTAG	6 cut(s)	210, 477, 488, 597, 839, 1548

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.