Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002455

Physical Location & Seq

Genomic Coordinates Reverse (-)

14693562 .. 14699874

Gene Structure 6313 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0108700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGTCTCTCCAGTTTTTCAACACTGGGACTTCGCACTTGAATTCCACTGCAATGGAAGCTTGCTCCTTGCAGTCACCAACTGTAACCACCATACCCTCCTCTTTATCCCATAATGGGTTTAAAGAACAGCCTTTTCTACGTGCTCAGGTCCTCAAGATTTCCAATTCAAAGAGGCACCCACATGTCAGGAAGCTAGGATTTCTTCATATCAAAGCTCAAGCCTCAGGCACAACGAATTCCAGCTCAGAGATAGTTGAGGAGGTTACGGGAAGAGTAGGTGTGAAAGATGAGAATGTGGTATTTGTCGCTGGTGCTACTGGTAAAGTTGGTTCACGAGCAGTAAGGGAGCTTTTGAAACTTGGGTTTCAAGTCAGAGCTGGCGTAAGGAGTGCTCAGAGAGCAGCCACCCTTGTAGAAAGTGTTAAGCAAATGAAGCTTGATGTTGAAAGTGCAAGCCAAGGAAGCCAACCTGTAGAAAAGCTTGAAATTGTGGAGTGCGACTTAGAGAAACAAGATCAGATTGGACCAGCATTGGGAACCGCATCAGTAGTCTTGTGCTGTATTGGTGCAAGCGAGAAGGAGATTTTTGATATTACTGGACCATATCGGATTGACTATCTGGCTACAAAAAATCTTATTGACGCAGCAACTGTTGCAAAAGTTAACCACTTCATATTGCTCACATCTCTGGGAACAAACAAAGTTGGATTTCCCGCTGCTATTCTGAATTTATTTTGGGGCGTCCTGATTTGGAAAAGAAAGGCTGAAGAGGCACTGATAGCCAGTGGACTTCCCTACACTATAGTGAGACCCGGTGGAATGGAACGGCCCACTGATGCTTACAAGGAAACTCATAATATTACTCTCTCAACGGAGGATACTTTATTCGGTGGTCAAGTGTCGAACCTGCAGGTAGCAGAGCTCATGGCATGCATTGCCAAAAATCCTGGCCTTTCTTACTTCAAAGTTGTTGAAGTAGTTGCAGAAACAACTGTTCCATTGACTCCTCTGGAGGAACTTCTGGCAAAGATACCATCTCAACGCGCTGACATATACTCACCAAAGGAATTTGGTGGTAGTGCTGCTGCTGCTGCTTCTGATCCAGAACCTTCTAAGATTGCCACATCTGAGAAACCAAGCACTCCCATTGAGAAAGAACCGGCAAAAGAAGAAGTGCTGGTAAAACAGCCATCATCTCCTTATATTGCCTATGAAGATTTAAAGCCACCAACATCTCCTACTCCAACACCAAGTGGTCCCAAACAAATTCCTCCAGATGCCTCTGCATCGGTAGAAGTTACCTCAACACCAGTAGAAGTTGCATCACAACCAATTGGAGGTAATGATGTGATAGAGGCTATCACAATCAGTGTTTCTGAAAAGGTTTCTCCTCAGAAATCAACTCATAGCCATTCACCCTACCATGTTTATGAGGATTTCAAGCCACCTAGTTCTCCAAGCCCAACGCCTGCTGGTCCCAAAAAAATTCCTCTGGATTCCTCAGCACCAGTAGAAGCTTCCTCAACATCGGTAGAAGTTGTATCACAATCAAGTGGAGGCAATGATGTTATTTCTGTTCCTTCCCAGAATCCCACTCATAGCCATTCACCCTTTCATGCATATGACAACTTTAAGCCCCCTTCATCACCATCTCCTAGTCCTCCAACCACATCACTCCTTTCAACACCCGCTGCAGATAATGGATCTCAACCGGGTGCCTTGTCGGTCAACAGCACAGTGAAAATTCCAACAGAAAATATGCAAAGTGACACAGACCAACATACCGAACCAAAGCCAAAACCACAATCGCCTTTCACTATGTATGAGGACTTAAAGCCTCCAGCATCGCCAATACCATCCCCAAAGAAATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006424 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0035670 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0071704 GO:0071840 GO:0090304 GO:0090567 GO:0099402 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00860 ko00970 ko01100 ko01110 ko01120 map00860 map00970 map01100 map01110 map01120

Pfam Domains

Protein Families

tRNA-synt_1c

Protein Analysis

624

Amino Acids

66.36

Weight (kDa)

5.93

Isoelectric Point (pI)

54.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NmrA	PF05368	98 - 267	2.1e-12	NmrA-like family
Epimerase	PF01370	100 - 229	4.5e-06	NAD dependent epimerase/dehydratase family
NAD_binding_10	PF13460	104 - 153	1.2e-06	NAD(P)H-binding
NAD_binding_10	PF13460	158 - 316	1.6e-25	NAD(P)H-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002455)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13810
fragaria_vesca	FvH4_2g14912 FvH4_2g14912 FvH4_2g20261
malus_domestica	MD14G1083500.v1.1
prunus_persica	Prupe.3G017000_v2.0.a1 Prupe.4G287100_v2.0.a1 Prupe.4G287100_v2.0.a1 Prupe.4G287100_v2.0.a1
pyrus_communis	pycom14g07250
rosa_chinensis	RchiOBHm_Chr6g0277511 RchiOBHm_Chr6g0286051
rosa_laevigata	RLG00000012586 RLG00000013296
rosa_multiflora	Rmu_sc0003910.1_g000009 Rmu_sc0032216.1_g000001 Rmu_sc0035337.1_g000001 Rmu_sc0035338.1_g000001
rosa_roxburghii	Rroxscaffold_7G00182500 Rroxscaffold_7G00191260
rosa_rugosa	Rorug06G0108700 Rorug06G0108700 Rorug06G0108800 Rorug06G0108900 Rorug06G0109000 Rorug06G0109100 Rorug06G0109200 Rorug06G0109300 Rorug06G0178600
rosa_samantha	Rh6AG219600 Rh6AG290700 Rh6BG223500 Rh6BG294100 Rh6CG226000 Rh6CG293600 Rh6DG216400 Rh6DG285700 Rh7AG416300 Rh7CG435600
rosa_wichuraiana	Rw6G019230 Rw6G025040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	901, 915
AccB1I	GGYRCC	2 cut(s)	174, 1715
AccII	CGCG	1 cut(s)	1044
AciI	CCGC	3 cut(s)	540, 714, 1689
AclWI	GGATC	2 cut(s)	1094, 1711
AcsI	RAATTY	8 cut(s)	40, 235, 727, 1067, 1266, 1485, 1743, 1868
AcuI	CTGAAG	1 cut(s)	786
AcyI	GRCGYC	1 cut(s)	741
AdeI	CACNNNGTG	1 cut(s)	1253
AfiI	CCNNNNNNNGG	3 cut(s)	114, 533, 1337
AflIII	ACRYGT	1 cut(s)	181
AjnI	CCWGG	1 cut(s)	946
AleI	CACNNNNGTG	1 cut(s)	803
Alw21I	GWGCWC	3 cut(s)	145, 394, 924
Alw26I	GTCTC	2 cut(s)	9, 802
AlwI	GGATC	2 cut(s)	1094, 1711
AlwNI	CAGNNNCTG	1 cut(s)	650
AoxI	GGCC	2 cut(s)	827, 949
ApeKI	GCWGC	8 cut(s)	401, 644, 716, 1082, 1085, 1088, 1091, 1691
ApoI	RAATTY	8 cut(s)	40, 235, 727, 1067, 1266, 1485, 1743, 1868
AspLEI	GCGC	1 cut(s)	1046
AspS9I	GGNCC	6 cut(s)	148, 524, 599, 828, 1256, 1475
AsuC2I	CCSGG	2 cut(s)	813, 1713
AsuHPI	GGTGA	5 cut(s)	66, 1050, 1407, 1599, 1638
AvaII	GGWCC	5 cut(s)	148, 524, 599, 1256, 1475
AxyI	CCTNAGG	1 cut(s)	223
BanI	GGYRCC	2 cut(s)	174, 1715
BanII	GRGCYC	1 cut(s)	924
BauI	CACGAG	1 cut(s)	333
Bbv12I	GWGCWC	3 cut(s)	145, 394, 924
BbvCI	CCTCAGC	1 cut(s)	1501
BbvI	GCAGC	8 cut(s)	413, 656, 703, 1069, 1072, 1075, 1078, 1678
BccI	CCATC	4 cut(s)	1042, 1198, 1657, 1864
BceAI	ACGGC	1 cut(s)	842
BciT130I	CCWGG	1 cut(s)	948
BciVI	GTATCC	1 cut(s)	871
BcnI	CCSGG	2 cut(s)	813, 1713
BcoDI	GTCTC	2 cut(s)	9, 802
BfaI	CTAG	4 cut(s)	194, 1449, 1656, 1873
BfmI	CTRYAG	4 cut(s)	471, 801, 908, 1692
BfuAI	ACCTGC	2 cut(s)	901, 915
BfuI	GTATCC	1 cut(s)	871
BisI	GCNGC	8 cut(s)	402, 645, 717, 1083, 1086, 1089, 1092, 1692
BlsI	GCNGC	8 cut(s)	403, 646, 718, 1084, 1087, 1090, 1093, 1693
Bme1390I	CCNGG	3 cut(s)	813, 948, 1713
Bme18I	GGWCC	5 cut(s)	148, 524, 599, 1256, 1475
BmgT120I	GGNCC	6 cut(s)	148, 524, 599, 828, 1256, 1475
BmiI	GGNNCC	5 cut(s)	176, 538, 1258, 1477, 1717
BmrFI	CCNGG	3 cut(s)	813, 948, 1713
BmrI	ACTGGG	1 cut(s)	33
BmsI	GCATC	6 cut(s)	551, 826, 1267, 1295, 1331, 1853
BmuI	ACTGGG	1 cut(s)	33
BpmI	CTGGAG	3 cut(s)	1031, 1257, 1824
Bpu10I	CCTNAGC	2 cut(s)	144, 1501
BpuEI	CTTGAG	2 cut(s)	137, 201
BpuMI	CCSGG	2 cut(s)	813, 1713
BsaAI	YACGTR	1 cut(s)	140
BsaHI	GRCGYC	1 cut(s)	741
BsaI	GGTCTC	1 cut(s)	802
BsaJI	CCNNGG	1 cut(s)	457
Bsc4I	CCNNNNNNNGG	3 cut(s)	114, 533, 1337
Bse118I	RCCGGY	1 cut(s)	1159
Bse1I	ACTGG	7 cut(s)	10, 28, 322, 601, 783, 1310, 1508
Bse21I	CCTNAGG	1 cut(s)	223
Bse3DI	GCAATG	3 cut(s)	57, 933, 1567
BseBI	CCWGG	1 cut(s)	948
BseDI	CCNNGG	1 cut(s)	457
BseGI	GGATG	1 cut(s)	1856
BseLI	CCNNNNNNNGG	3 cut(s)	114, 533, 1337
BseMI	GCAATG	3 cut(s)	57, 933, 1567
BseMII	CTCAG	7 cut(s)	158, 237, 258, 407, 1119, 1406, 1515
BseNI	ACTGG	7 cut(s)	10, 28, 322, 601, 783, 1310, 1508
BseRI	GAGGAG	4 cut(s)	88, 272, 996, 1380
BseXI	GCAGC	8 cut(s)	413, 656, 703, 1069, 1072, 1075, 1078, 1678
Bsh1236I	CGCG	1 cut(s)	1044
BshFI	GGCC	2 cut(s)	829, 951
BshNI	GGYRCC	2 cut(s)	174, 1715
BsiHKAI	GWGCWC	3 cut(s)	145, 394, 924
BsiSI	CCGG	3 cut(s)	813, 1160, 1712
BslFI	GGGAC	3 cut(s)	40, 1242, 1461
BslI	CCNNNNNNNGG	3 cut(s)	114, 533, 1337
BsmAI	GTCTC	2 cut(s)	9, 802
BsmFI	GGGAC	3 cut(s)	40, 1242, 1461
BsnI	GGCC	2 cut(s)	829, 951
Bso31I	GGTCTC	1 cut(s)	802
Bsp1286I	GDGCHC	3 cut(s)	145, 394, 924
Bsp143I	GATC	3 cut(s)	514, 1099, 1703
BspACI	CCGC	3 cut(s)	540, 714, 1689
BspANI	GGCC	2 cut(s)	829, 951
BspCNI	CTCAG	7 cut(s)	157, 236, 257, 406, 1120, 1405, 1514
BspFNI	CGCG	1 cut(s)	1044
BspLI	GGNNCC	5 cut(s)	176, 538, 1258, 1477, 1717
BspMAI	CTGCAG	2 cut(s)	912, 1696
BspMI	ACCTGC	2 cut(s)	901, 915
BspPI	GGATC	2 cut(s)	1094, 1711
BspT107I	GGYRCC	2 cut(s)	174, 1715
BspTNI	GGTCTC	1 cut(s)	802
BsrDI	GCAATG	3 cut(s)	57, 933, 1567
BsrFI	RCCGGY	1 cut(s)	1159
BsrI	ACTGG	7 cut(s)	10, 28, 322, 601, 783, 1310, 1508
BssAI	RCCGGY	1 cut(s)	1159
BssECI	CCNNGG	1 cut(s)	457
BssMI	GATC	3 cut(s)	514, 1099, 1703
BssNI	GRCGYC	1 cut(s)	741
BssSI	CACGAG	1 cut(s)	333
BssT1I	CCWWGG	1 cut(s)	457
Bst2BI	CACGAG	1 cut(s)	333
Bst2UI	CCWGG	1 cut(s)	948
Bst4CI	ACNGT	4 cut(s)	82, 652, 994, 1738
Bst6I	CTCTTC	2 cut(s)	265, 762
BstACI	GRCGYC	1 cut(s)	741
BstAPI	GCANNNNNTGC	2 cut(s)	653, 935
BstBAI	YACGTR	1 cut(s)	140
BstC8I	GCNNGC	6 cut(s)	61, 379, 454, 571, 931, 1470
BstDEI	CTNAG	9 cut(s)	144, 223, 244, 393, 502, 1113, 1128, 1392, 1501
BstF5I	GGATG	1 cut(s)	1856
BstFNI	CGCG	1 cut(s)	1044
BstHHI	GCGC	1 cut(s)	1046
BstKTI	GATC	3 cut(s)	517, 1102, 1706
BstMAI	GTCTC	2 cut(s)	9, 802
BstMBI	GATC	3 cut(s)	514, 1099, 1703
BstNI	CCWGG	1 cut(s)	948
BstNSI	RCATGY	2 cut(s)	185, 933
BstSCI	CCNGG	3 cut(s)	811, 946, 1711
BstSFI	CTRYAG	4 cut(s)	471, 801, 908, 1692
BstUI	CGCG	1 cut(s)	1044
BstV1I	GCAGC	8 cut(s)	413, 656, 703, 1069, 1072, 1075, 1078, 1678
BstX2I	RGATCY	1 cut(s)	1703
BstXI	CCANNNNNNTGG	1 cut(s)	52
BstYI	RGATCY	1 cut(s)	1703
Bsu36I	CCTNAGG	1 cut(s)	223
BsuI	GTATCC	1 cut(s)	871
BsuRI	GGCC	2 cut(s)	829, 951
BtgZI	GCGATG	1 cut(s)	1830
BtsCI	GGATG	1 cut(s)	1856
BtsI	GCAGTG	1 cut(s)	45
BtsIMutI	CAGTG	7 cut(s)	21, 45, 773, 790, 831, 1375, 1743
BveI	ACCTGC	2 cut(s)	901, 915
Cac8I	GCNNGC	6 cut(s)	61, 379, 454, 571, 931, 1470
CaiI	CAGNNNCTG	1 cut(s)	650
CfoI	GCGC	1 cut(s)	1046
Cfr10I	RCCGGY	1 cut(s)	1159
Cfr13I	GGNCC	6 cut(s)	148, 524, 599, 828, 1256, 1475
CseI	GACGC	2 cut(s)	650, 730
CviAII	CATG	5 cut(s)	182, 925, 930, 1424, 1616
DdeI	CTNAG	9 cut(s)	144, 223, 244, 393, 502, 1113, 1128, 1392, 1501
DpnI	GATC	3 cut(s)	516, 1101, 1705
DpnII	GATC	3 cut(s)	514, 1099, 1703
DraI	TTTAAA	2 cut(s)	121, 1221
DraIII	CACNNNGTG	1 cut(s)	1253
Eam1104I	CTCTTC	2 cut(s)	265, 762
EarI	CTCTTC	2 cut(s)	265, 762
Ecl136II	GAGCTC	1 cut(s)	922
Eco130I	CCWWGG	1 cut(s)	457
Eco24I	GRGCYC	1 cut(s)	924
Eco31I	GGTCTC	1 cut(s)	802
Eco47I	GGWCC	5 cut(s)	148, 524, 599, 1256, 1475
Eco53kI	GAGCTC	1 cut(s)	922
Eco57I	CTGAAG	1 cut(s)	786
Eco81I	CCTNAGG	1 cut(s)	223
EcoICRI	GAGCTC	1 cut(s)	922
EcoO109I	RGGNCCY	1 cut(s)	148
EcoRI	GAATTC	2 cut(s)	40, 235
EcoRII	CCWGG	1 cut(s)	946
EcoT14I	CCWWGG	1 cut(s)	457
EcoT22I	ATGCAT	2 cut(s)	935, 1621
EcoT38I	GRGCYC	1 cut(s)	924
ErhI	CCWWGG	1 cut(s)	457
FaeI	CATG	5 cut(s)	185, 928, 933, 1427, 1619
FaqI	GGGAC	3 cut(s)	40, 1242, 1461
FatI	CATG	5 cut(s)	181, 924, 929, 1423, 1615
FauI	CCCGC	2 cut(s)	721, 1696
FauNDI	CATATG	1 cut(s)	1621
Fnu4HI	GCNGC	8 cut(s)	402, 645, 717, 1083, 1086, 1089, 1092, 1692
FokI	GGATG	1 cut(s)	1843
FriOI	GRGCYC	1 cut(s)	924
Fsp4HI	GCNGC	8 cut(s)	402, 645, 717, 1083, 1086, 1089, 1092, 1692
FspBI	CTAG	4 cut(s)	194, 1449, 1656, 1873
GlaI	GCGC	1 cut(s)	1045
GluI	GCNGC	8 cut(s)	402, 645, 717, 1083, 1086, 1089, 1092, 1692
GsuI	CTGGAG	3 cut(s)	1031, 1257, 1824
HaeIII	GGCC	2 cut(s)	829, 951
HapII	CCGG	3 cut(s)	813, 1160, 1712
HgaI	GACGC	2 cut(s)	650, 730
HhaI	GCGC	1 cut(s)	1046
Hin1I	GRCGYC	1 cut(s)	741
Hin1II	CATG	5 cut(s)	185, 928, 933, 1427, 1619
Hin6I	GCGC	1 cut(s)	1044
HinP1I	GCGC	1 cut(s)	1044
HincII	GTYRAC	2 cut(s)	664, 1729
HindII	GTYRAC	2 cut(s)	664, 1729
HindIII	AAGCTT	4 cut(s)	57, 434, 479, 1515
HinfI	GANTC	3 cut(s)	1003, 1496, 1588
HpaI	GTTAAC	1 cut(s)	664
HpaII	CCGG	3 cut(s)	813, 1160, 1712
HphI	GGTGA	5 cut(s)	66, 1050, 1407, 1599, 1638
Hpy166II	GTNNAC	4 cut(s)	332, 664, 788, 1729
Hpy188III	TCNNGA	8 cut(s)	154, 187, 333, 745, 1010, 1103, 1274, 1493
Hpy8I	GTNNAC	4 cut(s)	332, 664, 788, 1729
HpyAV	CCTTC	4 cut(s)	571, 1119, 1590, 1650
HpyCH4III	ACNGT	4 cut(s)	82, 652, 994, 1738
HpyCH4IV	ACGT	1 cut(s)	139
HpyF3I	CTNAG	9 cut(s)	144, 223, 244, 393, 502, 1113, 1128, 1392, 1501
HpySE526I	ACGT	1 cut(s)	139
Hsp92I	GRCGYC	1 cut(s)	741
Hsp92II	CATG	5 cut(s)	185, 928, 933, 1427, 1619
HspAI	GCGC	1 cut(s)	1044
KspAI	GTTAAC	1 cut(s)	664
Kzo9I	GATC	3 cut(s)	514, 1099, 1703
LmnI	GCTCC	2 cut(s)	68, 346
Lsp1109I	GCAGC	8 cut(s)	413, 656, 703, 1069, 1072, 1075, 1078, 1678
LweI	GCATC	6 cut(s)	551, 826, 1267, 1295, 1331, 1853
MaeI	CTAG	4 cut(s)	194, 1449, 1656, 1873
MaeII	ACGT	1 cut(s)	139
MaeIII	GTNAC	5 cut(s)	72, 82, 262, 1297, 1766
MalI	GATC	3 cut(s)	516, 1101, 1705
MboI	GATC	3 cut(s)	514, 1099, 1703
MboII	GAAGA	5 cut(s)	194, 282, 779, 1181, 1226
MfeI	CAATTG	1 cut(s)	1332
MflI	RGATCY	1 cut(s)	1703
MhlI	GDGCHC	3 cut(s)	145, 394, 924
MlyI	GAGTC	1 cut(s)	997
MmeI	TCCRAC	4 cut(s)	685, 1268, 1688, 1772
Mph1103I	ATGCAT	2 cut(s)	935, 1621
MseI	TTAA	6 cut(s)	120, 423, 663, 1220, 1632, 1832
MslI	CAYNNNNRTG	5 cut(s)	50, 180, 803, 1428, 1620
MspA1I	CMGCKG	2 cut(s)	716, 1691
MspI	CCGG	3 cut(s)	813, 1160, 1712
MspR9I	CCNGG	3 cut(s)	813, 948, 1713
MunI	CAATTG	1 cut(s)	1332
MvaI	CCWGG	1 cut(s)	948
MvnI	CGCG	1 cut(s)	1044
NciI	CCSGG	2 cut(s)	813, 1713
NdeI	CATATG	1 cut(s)	1621
NdeII	GATC	3 cut(s)	514, 1099, 1703
NlaIII	CATG	5 cut(s)	185, 928, 933, 1427, 1619
NlaIV	GGNNCC	5 cut(s)	176, 538, 1258, 1477, 1717
NmuCI	GTSAC	2 cut(s)	72, 1766
NsiI	ATGCAT	2 cut(s)	935, 1621
NspI	RCATGY	2 cut(s)	185, 933
OliI	CACNNNNGTG	1 cut(s)	803
PaeI	GCATGC	1 cut(s)	933
PciI	ACATGT	1 cut(s)	181
PfeI	GAWTC	2 cut(s)	1496, 1588
PkrI	GCNGC	8 cut(s)	403, 646, 718, 1084, 1087, 1090, 1093, 1693
PleI	GAGTC	1 cut(s)	997
PpsI	GAGTC	1 cut(s)	997
Ppu21I	YACGTR	1 cut(s)	140
PpuMI	RGGWCCY	1 cut(s)	148
PscI	ACATGT	1 cut(s)	181
Psp124BI	GAGCTC	1 cut(s)	924
Psp5II	RGGWCCY	1 cut(s)	148
Psp6I	CCWGG	1 cut(s)	946
PspGI	CCWGG	1 cut(s)	946
PspN4I	GGNNCC	5 cut(s)	176, 538, 1258, 1477, 1717
PspPI	GGNCC	6 cut(s)	148, 524, 599, 828, 1256, 1475
PspPPI	RGGWCCY	1 cut(s)	148
PsrI	GAACNNNNNNTAC	2 cut(s)	313, 345
PstI	CTGCAG	2 cut(s)	912, 1696
PstNI	CAGNNNCTG	1 cut(s)	650
PsuI	RGATCY	1 cut(s)	1703
RseI	CAYNNNNRTG	5 cut(s)	50, 180, 803, 1428, 1620
SacI	GAGCTC	1 cut(s)	924
SaqAI	TTAA	6 cut(s)	120, 423, 663, 1220, 1632, 1832
SatI	GCNGC	8 cut(s)	402, 645, 717, 1083, 1086, 1089, 1092, 1692
Sau3AI	GATC	3 cut(s)	514, 1099, 1703
Sau96I	GGNCC	6 cut(s)	148, 524, 599, 828, 1256, 1475
SbfI	CCTGCAGG	1 cut(s)	912
SchI	GAGTC	1 cut(s)	997
ScrFI	CCNGG	3 cut(s)	813, 948, 1713
SdaI	CCTGCAGG	1 cut(s)	912
SduI	GDGCHC	3 cut(s)	145, 394, 924
SfaNI	GCATC	6 cut(s)	551, 826, 1267, 1295, 1331, 1853
SfcI	CTRYAG	4 cut(s)	471, 801, 908, 1692
SinI	GGWCC	5 cut(s)	148, 524, 599, 1256, 1475
SmiMI	CAYNNNNRTG	5 cut(s)	50, 180, 803, 1428, 1620
SmlI	CTYRAG	2 cut(s)	152, 216
SmoI	CTYRAG	2 cut(s)	152, 216
SphI	GCATGC	1 cut(s)	933
Sse8387I	CCTGCAGG	1 cut(s)	912
SsiI	CCGC	3 cut(s)	540, 714, 1689
SspI	AATATT	1 cut(s)	859
SspMI	CTAG	4 cut(s)	194, 1449, 1656, 1873
SstI	GAGCTC	1 cut(s)	924
StyD4I	CCNGG	3 cut(s)	811, 946, 1711
StyI	CCWWGG	1 cut(s)	457
TaaI	ACNGT	4 cut(s)	82, 652, 994, 1738
TaiI	ACGT	1 cut(s)	142
TaqI	TCGA	1 cut(s)	902
TaqII	GACCGA	1 cut(s)	1714
TfiI	GAWTC	2 cut(s)	1496, 1588
Tru1I	TTAA	6 cut(s)	120, 423, 663, 1220, 1632, 1832
Tru9I	TTAA	6 cut(s)	120, 423, 663, 1220, 1632, 1832
TscAI	CASTG	7 cut(s)	28, 52, 780, 790, 838, 1375, 1743
TseFI	GTSAC	2 cut(s)	72, 1766
TseI	GCWGC	8 cut(s)	401, 644, 716, 1082, 1085, 1088, 1091, 1691
Tsp45I	GTSAC	2 cut(s)	72, 1766
TspDTI	ATGAA	6 cut(s)	194, 446, 661, 1227, 1604, 1632
TspGWI	ACGGA	1 cut(s)	887
TspRI	CASTG	7 cut(s)	28, 52, 780, 790, 838, 1375, 1743
VpaK11BI	GGWCC	5 cut(s)	148, 524, 599, 1256, 1475
XapI	RAATTY	8 cut(s)	40, 235, 727, 1067, 1266, 1485, 1743, 1868
XceI	RCATGY	2 cut(s)	185, 933
XspI	CTAG	4 cut(s)	194, 1449, 1656, 1873
Zsp2I	ATGCAT	2 cut(s)	935, 1621

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.